Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FLJ41350 Sequence: fasta or formatted (120aa) NCBI GI: 239749889
Description:

PREDICTED: hypothetical protein isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {103aa} PREDICTED: hypothetical protein isoform 1
alt mRNA {120aa} PREDICTED: hypothetical protein isoform 2
alt prot {103aa} PREDICTED: hypothetical protein isoform 1
alt prot {103aa} PREDICTED: hypothetical protein isoform 1
alt mRNA {120aa} PREDICTED: hypothetical protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5          9           4
 C cysteine            1.7          2           1
 D aspartate           0.8          1           1
 E glutamate           3.3          4           1
 F phenylalanine       3.3          4           1
 G glycine             5.8          7           1
 H histidine           2.5          3           1
 I isoleucine          3.3          4           1
 K lysine              2.5          3           1
 L leucine            10.8         13           2
 M methionine          3.3          4           1
 N asparagine          3.3          4           1
 P proline            17.5         21           2
 Q glutamine           4.2          5           1
 R arginine            9.2         11           2
 S serine              6.7          8           1
 T threonine           5.0          6           1
 V valine              3.3          4           2
 W tryptophan          5.0          6           2
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein isoform 2 
FLJ41350              1.000   PREDICTED: hypothetical protein isoform 2 
FLJ41350              1.000   PREDICTED: hypothetical protein isoform 2 
FLJ41350              0.782   PREDICTED: hypothetical protein isoform 1 
FLJ41350              0.782   PREDICTED: hypothetical protein isoform 1 
FLJ41350              0.782   PREDICTED: hypothetical protein isoform 1 
MAGED1                0.042   melanoma antigen family D, 1 isoform a 
MAGED1                0.042   melanoma antigen family D, 1 isoform b 
MAGED1                0.042   melanoma antigen family D, 1 isoform b 
C21orf58              0.025   hypothetical protein LOC54058 
DBF4B                 0.021   DBF4 homolog B isoform 1 
COPZ2                 0.021   coatomer protein complex, subunit zeta 2 
CSF2RB                0.021   colony stimulating factor 2 receptor, beta precursor ...
FAM157C               0.021   PREDICTED: family with sequence similarity 157, mem...
VPS37C                0.021   vacuolar protein sorting 37C 
FAM157A               0.017   family with sequence similarity 157, member A [Homo...
SEC14L4               0.017   SEC14p-like protein TAP3 isoform b 
SEC14L4               0.017   SEC14p-like protein TAP3 isoform a 
LOC400553             0.017   PREDICTED: FLJ44904 protein 
LOC100132858          0.017   PREDICTED: similar to family with sequence similari...
FAM157B               0.017   family with sequence similarity 157, member B [Homo...
LOC644246             0.017   PREDICTED: hypothetical protein LOC644246 
SIN3A                 0.013   transcriptional co-repressor Sin3A 
SIN3A                 0.013   transcriptional co-repressor Sin3A 
SIN3A                 0.013   transcriptional co-repressor Sin3A 
BEND4                 0.013   BEN domain containing 4 isoform b 
BEND4                 0.013   BEN domain containing 4 isoform a 
LOC100287723          0.013   PREDICTED: hypothetical protein XP_002342271 
SLC35E2               0.013   solute carrier family 35, member E2 
ATP13A2               0.008   ATPase type 13A2 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press