Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239755001
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755001 PREDICTED: hypothetical protein [Homo sapiens]
(261 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755001 PREDICTED: hypothetical protein [Homo sapiens] 554 e-158
gi|239749563 PREDICTED: hypothetical protein XP_002347087 [Homo ... 554 e-158
gi|239744254 PREDICTED: hypothetical protein [Homo sapiens] 37 0.013
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 37 0.017
gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo ... 36 0.039
gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo ... 36 0.039
gi|239508696 PREDICTED: hypothetical protein [Homo sapiens] 36 0.039
gi|155029552 hypothetical protein LOC388115 [Homo sapiens] 36 0.039
gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ... 35 0.050
gi|239742763 PREDICTED: hypothetical protein [Homo sapiens] 35 0.050
gi|239740974 PREDICTED: hypothetical protein [Homo sapiens] 35 0.050
gi|239753543 PREDICTED: similar to hCG2041108 [Homo sapiens] 34 0.11
gi|239748119 PREDICTED: similar to hCG2041108 [Homo sapiens] 34 0.11
gi|239742018 PREDICTED: similar to hCG2041108 [Homo sapiens] 34 0.11
gi|169184025 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19
gi|239755004 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19
gi|169179740 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19
gi|169180137 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19
gi|4505777 PHD finger protein 1 isoform a [Homo sapiens] 33 0.25
gi|169211552 PREDICTED: hypothetical protein [Homo sapiens] 33 0.33
gi|239752864 PREDICTED: hypothetical protein [Homo sapiens] 33 0.33
gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo ... 33 0.33
gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting ... 33 0.33
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 32 0.43
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 32 0.43
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 32 0.43
gi|91208423 thyroid receptor-interacting protein 6 [Homo sapiens] 32 0.43
gi|55741655 anoctamin 8 [Homo sapiens] 32 0.56
gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens] 32 0.56
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 32 0.73
>gi|239755001 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 554 bits (1427), Expect = e-158
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MAQEGHVGSRHVREVKGHKEHLYHSLGKLTTWTVPTLGTLTPAITNPNGSYLKVAQQGTA 60
MAQEGHVGSRHVREVKGHKEHLYHSLGKLTTWTVPTLGTLTPAITNPNGSYLKVAQQGTA
Sbjct: 1 MAQEGHVGSRHVREVKGHKEHLYHSLGKLTTWTVPTLGTLTPAITNPNGSYLKVAQQGTA 60
Query: 61 DSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQ 120
DSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQ
Sbjct: 61 DSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQ 120
Query: 121 QVAPEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRAR 180
QVAPEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRAR
Sbjct: 121 QVAPEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRAR 180
Query: 181 GCVLGTVPIGSARGLPRPEATPIAHPSHWALTPYLCKTVQISVKCVQLAWRGWPWGLPQG 240
GCVLGTVPIGSARGLPRPEATPIAHPSHWALTPYLCKTVQISVKCVQLAWRGWPWGLPQG
Sbjct: 181 GCVLGTVPIGSARGLPRPEATPIAHPSHWALTPYLCKTVQISVKCVQLAWRGWPWGLPQG 240
Query: 241 TLSPWIWGGPVSGVQSIAGSI 261
TLSPWIWGGPVSGVQSIAGSI
Sbjct: 241 TLSPWIWGGPVSGVQSIAGSI 261
>gi|239749563 PREDICTED: hypothetical protein XP_002347087 [Homo
sapiens]
Length = 261
Score = 554 bits (1427), Expect = e-158
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MAQEGHVGSRHVREVKGHKEHLYHSLGKLTTWTVPTLGTLTPAITNPNGSYLKVAQQGTA 60
MAQEGHVGSRHVREVKGHKEHLYHSLGKLTTWTVPTLGTLTPAITNPNGSYLKVAQQGTA
Sbjct: 1 MAQEGHVGSRHVREVKGHKEHLYHSLGKLTTWTVPTLGTLTPAITNPNGSYLKVAQQGTA 60
Query: 61 DSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQ 120
DSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQ
Sbjct: 61 DSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQ 120
Query: 121 QVAPEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRAR 180
QVAPEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRAR
Sbjct: 121 QVAPEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRAR 180
Query: 181 GCVLGTVPIGSARGLPRPEATPIAHPSHWALTPYLCKTVQISVKCVQLAWRGWPWGLPQG 240
GCVLGTVPIGSARGLPRPEATPIAHPSHWALTPYLCKTVQISVKCVQLAWRGWPWGLPQG
Sbjct: 181 GCVLGTVPIGSARGLPRPEATPIAHPSHWALTPYLCKTVQISVKCVQLAWRGWPWGLPQG 240
Query: 241 TLSPWIWGGPVSGVQSIAGSI 261
TLSPWIWGGPVSGVQSIAGSI
Sbjct: 241 TLSPWIWGGPVSGVQSIAGSI 261
>gi|239744254 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 37.4 bits (85), Expect = 0.013
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 92 GLLSASAPWDRSLLGPLLAYQNRLFGPRQ-QVAPEGCGFGIRTVGSSRVAQGSPAPPRGW 150
GL S+S W + GP LA Q GP Q Q+ P G +++ +S+ PAPP W
Sbjct: 315 GLYSSSTGWRTASAGPALASQ----GPLQAQLLPPRRPLGAKSLPASQQPACGPAPPSRW 370
Query: 151 PL 152
P+
Sbjct: 371 PV 372
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 37.0 bits (84), Expect = 0.017
Identities = 45/165 (27%), Positives = 60/165 (36%), Gaps = 38/165 (23%)
Query: 88 ASGDGLLSASAPW---DRSLLGPLLAYQNRLFGPRQQVAPEGCGFGIRTVGSSRVAQGSP 144
A G AS PW + + L AY + L+GP + ++P GIR
Sbjct: 466 AEGAAYAGASPPWLQAEAATLPKPRAYGSELYGPGRPLSPRRAFEGIR------------ 513
Query: 145 APPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRARGCVLGTVPIGS-ARGLPRPE---A 200
LR + KQPS A + +GT+ S G P PE A
Sbjct: 514 ---------LRFE-------KQPSEEDEWAVPTSPPSPEVGTIRCASFCAGFPIPESPAA 557
Query: 201 TPIAHPSH---WALTPYLCKTVQISVKCVQLAWRGWPWGLPQGTL 242
T AH H W L +TV ++ L G+P G P L
Sbjct: 558 TAYAHAEHAQSWPSINLLMETVGSDIRSCPLCQLGFPVGYPDDAL 602
>gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo
sapiens]
Length = 443
Score = 35.8 bits (81), Expect = 0.039
Identities = 39/134 (29%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 69 GTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQQVAPEGCG 128
GTG E+ + AP S AP R+ L + RL G AP
Sbjct: 9 GTGTGPDGQEAAESRRPAP-------SLRAPRGRTHLPGVARCPWRLHGAA--FAPPASQ 59
Query: 129 FGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRARGCVLGTVP 188
+ + GS R A + G L RA G + GG GAWG P
Sbjct: 60 AALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGE---------AP 110
Query: 189 IGSARGLPRPEATP 202
+GSA L P A+P
Sbjct: 111 VGSA-ALSSPTASP 123
>gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo
sapiens]
Length = 522
Score = 35.8 bits (81), Expect = 0.039
Identities = 39/134 (29%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 69 GTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQQVAPEGCG 128
GTG E+ + AP S AP R+ L + RL G AP
Sbjct: 9 GTGTGPDGQEAAESRRPAP-------SLRAPRGRTHLPGVARCPWRLHGAA--FAPPASQ 59
Query: 129 FGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRARGCVLGTVP 188
+ + GS R A + G L RA G + GG GAWG P
Sbjct: 60 AALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGE---------AP 110
Query: 189 IGSARGLPRPEATP 202
+GSA L P A+P
Sbjct: 111 VGSA-ALSSPTASP 123
>gi|239508696 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 35.8 bits (81), Expect = 0.039
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 92 GLLSASAPWDRSLLGPLLAYQNRLFGPRQ-QVAPEGCGFGIRTVGSSRVAQGSPAPPRGW 150
GL S+S W + GP LA Q GP Q Q+ P G +++ +S+ PAPP W
Sbjct: 315 GLYSSSTGWRTASAGPALASQ----GPLQAQLLPPRRPPGAKSLPASQQPACGPAPPSRW 370
Query: 151 PL 152
P+
Sbjct: 371 PV 372
>gi|155029552 hypothetical protein LOC388115 [Homo sapiens]
Length = 534
Score = 35.8 bits (81), Expect = 0.039
Identities = 46/165 (27%), Positives = 65/165 (39%), Gaps = 22/165 (13%)
Query: 64 GRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAP-WD-----RSLLGPLLAYQNRLFG 117
G+ RGG Q + P + G+ A G L+ A WD L G + R
Sbjct: 308 GKGRGG----QASRPSVAPATGSKARGKERLTGRARRWDMKEDKEELEGQEGSQSTRETP 363
Query: 118 PRQQVAPEGCGFGIRTVGSSRVAQ---GSPAPPRGWPLFLRADIWGFSSRKQP------S 168
++ A + G +GS+ A SP P+G + A S ++ S
Sbjct: 364 SEEEQAQKQSGMEQGRLGSAPAASPALASPEGPKGESVASTASSVPCSPQEPDLAPLDLS 423
Query: 169 LGGAGAWGSRARGCVLGTVPIGSARGLPRPEAT---PIAHPSHWA 210
LGGAG G R GCVLG P + PE + P+ +H A
Sbjct: 424 LGGAGIPGPRESGCVLGLRPGAQESPVSWPEGSKQQPLGWSNHQA 468
>gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo
sapiens]
Length = 800
Score = 35.4 bits (80), Expect = 0.050
Identities = 54/179 (30%), Positives = 67/179 (37%), Gaps = 15/179 (8%)
Query: 32 WTVPTLGTLTPAITNPNGSYLKVAQQGTADSR---GRNRGGTGGAQQAWPLPEASKGAPA 88
W P+L T TP +T G+ L Q+ + G +G G A + P +G P
Sbjct: 391 WPPPSLRTPTPGLTEGGGTGLPSKQRRGPSPKTELGGPQGSLGRASLSGPFGPGPQGGPP 450
Query: 89 SGDGL-LSASAPWDRSLLGPLLAYQNRLF----GPRQQVAPE---GCGFGIRTVGSSRVA 140
S D L R LG L Y R G R ++P+ C G R V S R
Sbjct: 451 SRDRRHLGVQIGRVRVPLGSALPYPARSELAPPGARDALSPDPERPCP-GTRGVRSGREG 509
Query: 141 QGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRARGCVLGTVPIGSARGL-PRP 198
SPAP L A F+ RK + G A G P SAR PRP
Sbjct: 510 LLSPAPRSA--LGETAPTAQFTFRKVRNPPGPRGGAMSAAGTRSPPGPAESARSRGPRP 566
>gi|239742763 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 35.4 bits (80), Expect = 0.050
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 92 GLLSASAPWDRSLLGPLLAYQNRLFGPRQ-QVAPEGCGFGIRTVGSSRVAQGSPAPPRGW 150
GL S+S W + GP LA Q GP Q Q+ P G +++ +S+ PAPP W
Sbjct: 315 GLYSSSTGWRTASAGPSLASQ----GPLQAQLLPPRRPPGAKSLPASQQPACGPAPPSRW 370
Query: 151 PL 152
P+
Sbjct: 371 PV 372
>gi|239740974 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 35.4 bits (80), Expect = 0.050
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 92 GLLSASAPWDRSLLGPLLAYQNRLFGPRQ-QVAPEGCGFGIRTVGSSRVAQGSPAPPRGW 150
GL S+S W + GP LA Q GP Q Q+ P G +++ +S+ PAPP W
Sbjct: 315 GLYSSSTGWRTASAGPSLASQ----GPLQAQLLPPRRPPGAKSLPASQQPACGPAPPSRW 370
Query: 151 PL 152
P+
Sbjct: 371 PV 372
>gi|239753543 PREDICTED: similar to hCG2041108 [Homo sapiens]
Length = 299
Score = 34.3 bits (77), Expect = 0.11
Identities = 41/135 (30%), Positives = 49/135 (36%), Gaps = 21/135 (15%)
Query: 67 RGGTGGAQQAWPL--PEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNR--LFGPRQQV 122
R G GAQ L P A P D S P G A Q+R P +
Sbjct: 26 RAGRVGAQGGVALLFPSALPSGPGGQDPGASGWEPPPVGAPGSPAAPQSRGNAVRPASVL 85
Query: 123 APEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFS--SRKQPSLGG---AGAWGS 177
P CG +SR+ G PAP R WP W S + + GG A W
Sbjct: 86 LPSACG-----QRTSRITGGLPAPDRKWP-------WQVSLQTSNRHICGGSLIARHWVL 133
Query: 178 RARGCVLGTVPIGSA 192
A C+ G P GS+
Sbjct: 134 TAAHCISGVDPGGSS 148
>gi|239748119 PREDICTED: similar to hCG2041108 [Homo sapiens]
Length = 299
Score = 34.3 bits (77), Expect = 0.11
Identities = 41/135 (30%), Positives = 49/135 (36%), Gaps = 21/135 (15%)
Query: 67 RGGTGGAQQAWPL--PEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNR--LFGPRQQV 122
R G GAQ L P A P D S P G A Q+R P +
Sbjct: 26 RAGRVGAQGGVALLFPSALPSGPGGQDPGASGWEPPPVGAPGSPAAPQSRGNAVRPASVL 85
Query: 123 APEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFS--SRKQPSLGG---AGAWGS 177
P CG +SR+ G PAP R WP W S + + GG A W
Sbjct: 86 LPSACG-----QRTSRITGGLPAPDRKWP-------WQVSLQTSNRHICGGSLIARHWVL 133
Query: 178 RARGCVLGTVPIGSA 192
A C+ G P GS+
Sbjct: 134 TAAHCISGVDPGGSS 148
>gi|239742018 PREDICTED: similar to hCG2041108 [Homo sapiens]
Length = 299
Score = 34.3 bits (77), Expect = 0.11
Identities = 41/135 (30%), Positives = 49/135 (36%), Gaps = 21/135 (15%)
Query: 67 RGGTGGAQQAWPL--PEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNR--LFGPRQQV 122
R G GAQ L P A P D S P G A Q+R P +
Sbjct: 26 RAGRVGAQGGVALLFPSALPSGPGGQDPGASGWEPPPVGAPGSPAAPQSRGNAVRPASVL 85
Query: 123 APEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFS--SRKQPSLGG---AGAWGS 177
P CG +SR+ G PAP R WP W S + + GG A W
Sbjct: 86 LPSACG-----QRTSRITGGLPAPDRKWP-------WQVSLQTSNRHICGGSLIARHWVL 133
Query: 178 RARGCVLGTVPIGSA 192
A C+ G P GS+
Sbjct: 134 TAAHCISGVDPGGSS 148
>gi|169184025 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 33.5 bits (75), Expect = 0.19
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Query: 162 SSRKQPSLGGAGAWGSRARG---CVLGTVPIGSARGLPRPEATPIAHPSHWALTPYLCKT 218
+ K S GGA W S+ RG G+ RG+PRP P+AH P C++
Sbjct: 29 AGNKCGSRGGA-RWSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAH-------PLPCES 80
Query: 219 VQISVKCVQLAWRGWPWGLPQ 239
V C A G P GLPQ
Sbjct: 81 VS---PCAWPACFG-PSGLPQ 97
>gi|239755004 PREDICTED: hypothetical protein [Homo sapiens]
Length = 558
Score = 33.5 bits (75), Expect = 0.19
Identities = 34/122 (27%), Positives = 43/122 (35%), Gaps = 9/122 (7%)
Query: 69 GTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQQVAPEGCG 128
GTG E+ + AP S AP R+ L + RL G AP
Sbjct: 9 GTGTGPDGQEAAESRRPAP-------SLRAPRGRTHLPGVARCPWRLHGAA--FAPPASQ 59
Query: 129 FGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRARGCVLGTVP 188
+ + GS R A + G L RA G + GG GAWG G + P
Sbjct: 60 AALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSP 119
Query: 189 IG 190
G
Sbjct: 120 TG 121
>gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 33.5 bits (75), Expect = 0.19
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Query: 162 SSRKQPSLGGAGAWGSRARG---CVLGTVPIGSARGLPRPEATPIAHPSHWALTPYLCKT 218
+ K S GGA W S+ RG G+ RG+PRP P+AH P C++
Sbjct: 29 AGNKCGSRGGA-RWSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAH-------PLPCES 80
Query: 219 VQISVKCVQLAWRGWPWGLPQ 239
V C A G P GLPQ
Sbjct: 81 VS---PCAWPACFG-PSGLPQ 97
>gi|169180137 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 33.5 bits (75), Expect = 0.19
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Query: 162 SSRKQPSLGGAGAWGSRARG---CVLGTVPIGSARGLPRPEATPIAHPSHWALTPYLCKT 218
+ K S GGA W S+ RG G+ RG+PRP P+AH P C++
Sbjct: 29 AGNKCGSRGGA-RWSSKPRGPGGAAAGSESQSPPRGVPRPSRRPLAH-------PLPCES 80
Query: 219 VQISVKCVQLAWRGWPWGLPQ 239
V C A G P GLPQ
Sbjct: 81 VS---PCAWPACFG-PSGLPQ 97
>gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]
Length = 457
Score = 33.1 bits (74), Expect = 0.25
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 87 PASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQQVAPEGCGFGIRTVGSSRVAQGSPAP 146
P +GDG L+ + PW R L P A + P ++ E G G T+ S++ A+ A
Sbjct: 341 PPTGDGALTRAGPWGRGLTSPGEAPEAGARAPEEEAEGESGGAG-ATLSSAQSARAPGAE 399
Query: 147 PRG 149
G
Sbjct: 400 GAG 402
>gi|169211552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 32.7 bits (73), Expect = 0.33
Identities = 33/114 (28%), Positives = 42/114 (36%), Gaps = 35/114 (30%)
Query: 144 PAPPRGWPLFLRADIW----GFSSRKQPSLGGAG----------AWGSRARGCVLGTVPI 189
P P R W F +W GF S+GG G AWG GT P
Sbjct: 60 PRPSRAWSSFPCCCLWDLGGGFDKSWSSSVGGEGEIQGQVACSPAWGR-------GTQPS 112
Query: 190 GSARGLPRPEATPIAHPSHWALTPYLCKTVQISVKCVQLAWRGWPWGLPQGTLS 243
G+ +G PR HP P + V+ +QL G P P+G +S
Sbjct: 113 GAEKGTPR-------HPE----LPGMDDMGGTGVRGLQL---GCPMAQPEGNIS 152
>gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 386
Score = 32.7 bits (73), Expect = 0.33
Identities = 40/125 (32%), Positives = 47/125 (37%), Gaps = 23/125 (18%)
Query: 78 PLPEASKGA----PASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQQVAPEGCGFGIRT 133
P P A+ G PA G GL R G L A R R ++A G G R
Sbjct: 122 PPPRAAHGRGTQLPAPGSGLRG------RGQRGRLSAATWRRGPARAELA----GSGRRW 171
Query: 134 VGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRARGCVLGTVPIGSAR 193
G +G APPR WP L +PS G G RA G V + S
Sbjct: 172 WGVGEAREGRSAPPRDWPEPL--------GELRPSAPRGGKGGPRA-GVVAASWARDSGP 222
Query: 194 GLPRP 198
G+ RP
Sbjct: 223 GVGRP 227
>gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo
sapiens]
Length = 386
Score = 32.7 bits (73), Expect = 0.33
Identities = 40/125 (32%), Positives = 47/125 (37%), Gaps = 23/125 (18%)
Query: 78 PLPEASKGA----PASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQQVAPEGCGFGIRT 133
P P A+ G PA G GL R G L A R R ++A G G R
Sbjct: 122 PPPRAAHGRGTQLPAPGSGLRG------RGQRGRLSAATWRRGPARAELA----GSGRRW 171
Query: 134 VGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGGAGAWGSRARGCVLGTVPIGSAR 193
G +G APPR WP L +PS G G RA G V + S
Sbjct: 172 WGVGEAREGRSAPPRDWPEPL--------GELRPSAPRGGKGGPRA-GVVAASWARDSGP 222
Query: 194 GLPRP 198
G+ RP
Sbjct: 223 GVGRP 227
>gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting
protein [Homo sapiens]
Length = 1209
Score = 32.7 bits (73), Expect = 0.33
Identities = 40/142 (28%), Positives = 50/142 (35%), Gaps = 13/142 (9%)
Query: 42 PAITNPNGSYLKVAQQGT--ADSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAP 99
PA + G A GT +RG G G P P A + A A D + P
Sbjct: 971 PAAKSAFGQLPSCATAGTEAGGARGTFHMGCGSPSFLTPSPGAERDAGAQAD----RTPP 1026
Query: 100 WDRSLLGPLLAYQNRLFGPRQQVAPEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIW 159
W A+Q+RL P + VGS R +GS P RG P A
Sbjct: 1027 WSD------FAHQSRLPSPWVLRSEGRDAVWRGGVGSER-DKGSEGPARGLPSLPLAGFS 1079
Query: 160 GFSSRKQPSLGGAGAWGSRARG 181
S + G +WG R G
Sbjct: 1080 PLLSTQLFHFGKGVSWGGRQAG 1101
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 32.3 bits (72), Expect = 0.43
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 55 AQQGTADSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNR 114
A Q +A+ +G N+G G A L G PA+G SA+ + L GPL+ +
Sbjct: 208 APQESAE-QGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSGPLI---SD 263
Query: 115 LFGPRQQVAPE 125
F R++ APE
Sbjct: 264 FFAKRKRSAPE 274
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 32.3 bits (72), Expect = 0.43
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 55 AQQGTADSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNR 114
A Q +A+ +G N+G G A L G PA+G SA+ + L GPL+ +
Sbjct: 208 APQESAE-QGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSGPLI---SD 263
Query: 115 LFGPRQQVAPE 125
F R++ APE
Sbjct: 264 FFAKRKRSAPE 274
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 32.3 bits (72), Expect = 0.43
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 55 AQQGTADSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNR 114
A Q +A+ +G N+G G A L G PA+G SA+ + L GPL+ +
Sbjct: 219 APQESAE-QGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSGPLI---SD 274
Query: 115 LFGPRQQVAPE 125
F R++ APE
Sbjct: 275 FFAKRKRSAPE 285
>gi|91208423 thyroid receptor-interacting protein 6 [Homo sapiens]
Length = 476
Score = 32.3 bits (72), Expect = 0.43
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 21/121 (17%)
Query: 67 RGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQQVAPEG 126
R G+ A PLP + G P +AS P GP Q ++ P + G
Sbjct: 132 RTGSLKPNPASPLPASPYGGPTPAS-YTTASTP-----AGPAFPVQVKVAQPVR-----G 180
Query: 127 CGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIW--GFSSRKQPSLG----GAGAWGSRAR 180
CG R G+S+ + P P +PL R ++W G+ S+++P G AG G R
Sbjct: 181 CGPPRR--GASQAS--GPLPGPHFPLPGRGEVWGPGYRSQREPGPGAKEEAAGVSGPAGR 236
Query: 181 G 181
G
Sbjct: 237 G 237
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 32.0 bits (71), Expect = 0.56
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 17/88 (19%)
Query: 68 GGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQNRLFGPRQQVAPEGC 127
G G QA P G P+SG + S P D +L L A PR + EG
Sbjct: 1065 GSNGAGGQARP-----DGTPSSGSSRVQRSGPVDEALAEELEA-------PRPE--EEGS 1110
Query: 128 GFGIRTVGSSRV---AQGSPAPPRGWPL 152
G + VG+ + SPAPP PL
Sbjct: 1111 GTALAPVGAPALRTRRSRSPAPPPPMPL 1138
>gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens]
Length = 689
Score = 32.0 bits (71), Expect = 0.56
Identities = 38/147 (25%), Positives = 53/147 (36%), Gaps = 22/147 (14%)
Query: 56 QQGTADSRGRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPLLAYQN-- 113
+ + + RG G G + P A+ G + G S+S P + G Q+
Sbjct: 37 EAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHG 96
Query: 114 --RLFGPRQQVAPEGCGFGIRTVGSSRVAQGSPAPPRGWPLFLRADIWGFSSRKQPSLGG 171
RL P + AP G R G + + G PAPPR G+ + P GG
Sbjct: 97 EARLSDPPGRAAPPDVGEERRGGGGTEL--GPPAPPRPRN--------GYQPHRPPGGGG 146
Query: 172 AGAWGSRARGCVLGTVPIGSARGLPRP 198
G R C +G G G P
Sbjct: 147 ----GKRRNSCNVG----GGGGGFKHP 165
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 31.6 bits (70), Expect = 0.73
Identities = 44/148 (29%), Positives = 54/148 (36%), Gaps = 31/148 (20%)
Query: 17 GHKEHLYHSLGKLTTWTVPTLGTL------------TPAITNPNGSYLK-VAQQGTADSR 63
G + H GKL T+G P P G+ + VA A SR
Sbjct: 72 GSRSRYCHGDGKLAAAAAGTVGPRWLPAGQCLSEAERPRRPEPGGARSRPVAASPAASSR 131
Query: 64 GRNRGGTGGAQQAWPLPEASKGAPASGDGLLSASAPWDRSLLGPL-LAYQNRLFGPRQQV 122
R+R PE+S GAP S L S P L P L+ + RL P+ Q
Sbjct: 132 ARSR------------PESSPGAPGSSVPALLPSLP---PLAAPRPLSARPRLRPPQPQP 176
Query: 123 APEGCGFGIRT--VGSSRVAQGSPAPPR 148
G G R G SR +GS PR
Sbjct: 177 LALTVGNGPRAPPAGGSRQPRGSVRGPR 204
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,385,433
Number of Sequences: 37866
Number of extensions: 697556
Number of successful extensions: 2516
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 2476
Number of HSP's gapped (non-prelim): 132
length of query: 261
length of database: 18,247,518
effective HSP length: 100
effective length of query: 161
effective length of database: 14,460,918
effective search space: 2328207798
effective search space used: 2328207798
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.