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Search of human proteins with 239754896
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754896 PREDICTED: hypothetical protein XP_002346153 [Homo
sapiens]
(156 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754896 PREDICTED: hypothetical protein XP_002346153 [Homo ... 342 8e-95
gi|239749435 PREDICTED: hypothetical protein XP_002347043 [Homo ... 342 8e-95
gi|239743569 PREDICTED: hypothetical protein XP_002342895 [Homo ... 342 8e-95
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 41 5e-04
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 41 5e-04
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 41 5e-04
gi|53292629 keratin associated protein 5-11 [Homo sapiens] 36 0.015
gi|71274109 nuclear factor of kappa light polypeptide gene enhan... 33 0.098
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 33 0.098
gi|169204828 PREDICTED: hypothetical protein [Homo sapiens] 33 0.13
gi|169205567 PREDICTED: hypothetical protein [Homo sapiens] 33 0.13
gi|40786420 immunoglobulin-like domain containing receptor 2 [Ho... 33 0.13
gi|122937285 immunoglobulin superfamily 5 like [Homo sapiens] 33 0.13
gi|169204182 PREDICTED: hypothetical protein [Homo sapiens] 32 0.17
gi|118572608 keratin associated protein 4-5 [Homo sapiens] 32 0.17
gi|45545424 LISCH protein isoform 2 [Homo sapiens] 32 0.22
gi|45505163 LISCH protein isoform 1 [Homo sapiens] 32 0.22
gi|41281683 disabled homolog 2 interacting protein isoform 2 [Ho... 32 0.29
gi|94967023 disabled homolog 2 interacting protein isoform 1 [Ho... 32 0.29
gi|39752687 hypothetical protein LOC375791 [Homo sapiens] 32 0.29
gi|59709427 XK, Kell blood group complex subunit-related family,... 32 0.29
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 32 0.29
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 31 0.37
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 31 0.37
gi|239756792 PREDICTED: hypothetical protein [Homo sapiens] 31 0.37
gi|239751312 PREDICTED: hypothetical protein [Homo sapiens] 31 0.37
gi|239745809 PREDICTED: hypothetical protein [Homo sapiens] 31 0.37
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 31 0.37
gi|86990435 G protein signalling regulator 19 [Homo sapiens] 31 0.49
gi|5031705 G protein signalling regulator 19 [Homo sapiens] 31 0.49
>gi|239754896 PREDICTED: hypothetical protein XP_002346153 [Homo
sapiens]
Length = 156
Score = 342 bits (877), Expect = 8e-95
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MKFLRVRLSSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPR 60
MKFLRVRLSSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPR
Sbjct: 1 MKFLRVRLSSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPR 60
Query: 61 GLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARA 120
GLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARA
Sbjct: 61 GLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARA 120
Query: 121 RPRVYEPVTPSRGESARLAARRPRPFPASPRPRKAE 156
RPRVYEPVTPSRGESARLAARRPRPFPASPRPRKAE
Sbjct: 121 RPRVYEPVTPSRGESARLAARRPRPFPASPRPRKAE 156
>gi|239749435 PREDICTED: hypothetical protein XP_002347043 [Homo
sapiens]
Length = 156
Score = 342 bits (877), Expect = 8e-95
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MKFLRVRLSSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPR 60
MKFLRVRLSSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPR
Sbjct: 1 MKFLRVRLSSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPR 60
Query: 61 GLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARA 120
GLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARA
Sbjct: 61 GLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARA 120
Query: 121 RPRVYEPVTPSRGESARLAARRPRPFPASPRPRKAE 156
RPRVYEPVTPSRGESARLAARRPRPFPASPRPRKAE
Sbjct: 121 RPRVYEPVTPSRGESARLAARRPRPFPASPRPRKAE 156
>gi|239743569 PREDICTED: hypothetical protein XP_002342895 [Homo
sapiens]
Length = 156
Score = 342 bits (877), Expect = 8e-95
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MKFLRVRLSSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPR 60
MKFLRVRLSSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPR
Sbjct: 1 MKFLRVRLSSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPR 60
Query: 61 GLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARA 120
GLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARA
Sbjct: 61 GLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDFTRLPAARA 120
Query: 121 RPRVYEPVTPSRGESARLAARRPRPFPASPRPRKAE 156
RPRVYEPVTPSRGESARLAARRPRPFPASPRPRKAE
Sbjct: 121 RPRVYEPVTPSRGESARLAARRPRPFPASPRPRKAE 156
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 40.8 bits (94), Expect = 5e-04
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 20/128 (15%)
Query: 30 CPHSCYRCRSRCCCCCRCSWHSYAGPLHG------PRGL-VRAGGPPSVR----GGTHAT 78
C S RC CCCC R S S +GP+ G RG VR GG R GG+HA
Sbjct: 22 CKPSAGRCARSCCCCGRRSLPSVSGPVRGRAERRPARGKHVRGGGVGGCRDSRAGGSHAA 81
Query: 79 REPLAAAG-RWSGFG------PLLLQQTLCLSTACSTWEDFTRLPAARARPRVYEPVTPS 131
L G S G P L+ ++ L A AA P P PS
Sbjct: 82 PSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPS 141
Query: 132 --RGESAR 137
RG S R
Sbjct: 142 SRRGASKR 149
Score = 30.4 bits (67), Expect = 0.64
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 12/107 (11%)
Query: 48 SWHSYAGPLHGPRGLVRAGGPPSVRGGTHATR----EPLAAAGRWSGFGPLLLQQTLCLS 103
SWH + RG GG + G + R EP GR SG L
Sbjct: 317 SWHPFVANKLCGRGKGAGGGASRPKEGVGSGRARAWEP--RGGRESGRSRRRKSLLEDLQ 374
Query: 104 TACSTWEDFTRLPAARARPRVYEPV-----TPSRGESARLAARRPRP 145
T + W +P +RP + V T R + RLAAR PRP
Sbjct: 375 TEATLWPS-REVPREPSRPSCPQGVAETHTTAERAQLRRLAARAPRP 420
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 40.8 bits (94), Expect = 5e-04
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 20/128 (15%)
Query: 30 CPHSCYRCRSRCCCCCRCSWHSYAGPLHG------PRGL-VRAGGPPSVR----GGTHAT 78
C S RC CCCC R S S +GP+ G RG VR GG R GG+HA
Sbjct: 22 CKPSAGRCARSCCCCGRRSLPSVSGPVRGRAERRPARGKHVRGGGVGGCRDSRAGGSHAA 81
Query: 79 REPLAAAG-RWSGFG------PLLLQQTLCLSTACSTWEDFTRLPAARARPRVYEPVTPS 131
L G S G P L+ ++ L A AA P P PS
Sbjct: 82 PSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPS 141
Query: 132 --RGESAR 137
RG S R
Sbjct: 142 SRRGASKR 149
Score = 30.4 bits (67), Expect = 0.64
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 12/107 (11%)
Query: 48 SWHSYAGPLHGPRGLVRAGGPPSVRGGTHATR----EPLAAAGRWSGFGPLLLQQTLCLS 103
SWH + RG GG + G + R EP GR SG L
Sbjct: 270 SWHPFVANKLCGRGKGAGGGASRPKEGVGSGRARAWEP--RGGRESGRSRRRKSLLEDLQ 327
Query: 104 TACSTWEDFTRLPAARARPRVYEPV-----TPSRGESARLAARRPRP 145
T + W +P +RP + V T R + RLAAR PRP
Sbjct: 328 TEATLWPS-REVPREPSRPSCPQGVAETHTTAERAQLRRLAARAPRP 373
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 40.8 bits (94), Expect = 5e-04
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 20/128 (15%)
Query: 30 CPHSCYRCRSRCCCCCRCSWHSYAGPLHG------PRGL-VRAGGPPSVR----GGTHAT 78
C S RC CCCC R S S +GP+ G RG VR GG R GG+HA
Sbjct: 22 CKPSAGRCARSCCCCGRRSLPSVSGPVRGRAERRPARGKHVRGGGVGGCRDSRAGGSHAA 81
Query: 79 REPLAAAG-RWSGFG------PLLLQQTLCLSTACSTWEDFTRLPAARARPRVYEPVTPS 131
L G S G P L+ ++ L A AA P P PS
Sbjct: 82 PSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPS 141
Query: 132 --RGESAR 137
RG S R
Sbjct: 142 SRRGASKR 149
Score = 30.4 bits (67), Expect = 0.64
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 12/107 (11%)
Query: 48 SWHSYAGPLHGPRGLVRAGGPPSVRGGTHATR----EPLAAAGRWSGFGPLLLQQTLCLS 103
SWH + RG GG + G + R EP GR SG L
Sbjct: 317 SWHPFVANKLCGRGKGAGGGASRPKEGVGSGRARAWEP--RGGRESGRSRRRKSLLEDLQ 374
Query: 104 TACSTWEDFTRLPAARARPRVYEPV-----TPSRGESARLAARRPRP 145
T + W +P +RP + V T R + RLAAR PRP
Sbjct: 375 TEATLWPS-REVPREPSRPSCPQGVAETHTTAERAQLRRLAARAPRP 420
>gi|53292629 keratin associated protein 5-11 [Homo sapiens]
Length = 156
Score = 35.8 bits (81), Expect = 0.015
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 9 SSHSCVLHALASDLSGPRGCCCPHSCYRCRSRCC--CCCRCS 48
SS C S S P CCC SC C+S CC CCC+ S
Sbjct: 93 SSSGCGSFCCQSSCSKP--CCCQSSC--CQSSCCKPCCCQSS 130
Score = 30.4 bits (67), Expect = 0.64
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 10/48 (20%)
Query: 10 SHSCVLHALASDLSGPRGCCCPHSCYR--CRSRCCC--------CCRC 47
S C + S + CCC SC + C CCC CC+C
Sbjct: 107 SKPCCCQSSCCQSSCCKPCCCQSSCCQSSCFKPCCCQSSCCVPVCCQC 154
Score = 29.3 bits (64), Expect = 1.4
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 28 CCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPRGLVRAGGPPSVRGG 74
CC P C C+ CCC CS S G G +G G S +GG
Sbjct: 35 CCVPICC--CKPVCCCVPACSCSS-CGSCGGSKG--GCGSCGSSKGG 76
>gi|71274109 nuclear factor of kappa light polypeptide gene enhancer
in B-cells inhibitor, epsilon [Homo sapiens]
Length = 500
Score = 33.1 bits (74), Expect = 0.098
Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 18/114 (15%)
Query: 53 AGPLHGPRGLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDF 112
AGPL G R GG G R P + G G GP + L TA TW
Sbjct: 29 AGPLSGSARRGRGGG------GAIRVRRPCWSGGAGRGGGPAWAVR-LPTVTAGWTWPAL 81
Query: 113 TRLPAARARP-----------RVYEPVTPSRGESARLAARRPRPFPASPRPRKA 155
L + RA P R P+ + + + A R P PA PR A
Sbjct: 82 RTLSSLRAGPSEPHSPGRRPPRAGRPLCQADPQPGKAARRSLEPDPAQTGPRPA 135
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 33.1 bits (74), Expect = 0.098
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 20 SDLSGPRGCCCPHSCYR---CRSRCC--CCCRC 47
S SG CC SCY+ C+S CC CC+C
Sbjct: 203 SCFSGCGSSCCQSSCYKPCCCQSSCCVPVCCQC 235
Score = 30.4 bits (67), Expect = 0.64
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 27 GCCCPHSCYRCRSRCCCCCRCSWHS 51
GCC P C C+ CCC CS S
Sbjct: 61 GCCVPVCC--CKPMCCCVPACSCSS 83
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 8/29 (27%)
Query: 28 CCCPHSCYR-CRSRCC-------CCCRCS 48
CC P SC+ C S CC CCC+ S
Sbjct: 198 CCKPCSCFSGCGSSCCQSSCYKPCCCQSS 226
Score = 28.1 bits (61), Expect = 3.2
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Query: 29 CCPHSC---YRCRSRCCCCCRC 47
CC SC Y C+S CC C C
Sbjct: 183 CCQSSCCKPYCCQSSCCKPCSC 204
Score = 26.6 bits (57), Expect = 9.2
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 20/47 (42%)
Query: 28 CCCPHSC------------YRCRSRCC--------CCCRCSWHSYAG 54
CCC C Y C+S CC CC CS S G
Sbjct: 163 CCCSSGCGSSCCQSSCCKPYCCQSSCCKPYCCQSSCCKPCSCFSGCG 209
>gi|169204828 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 32.7 bits (73), Expect = 0.13
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
Query: 30 CPHSCYRCRSRCCCCCRCSW 49
CP C C CCCCC C W
Sbjct: 152 CPGCCCCC---CCCCCCCCW 168
>gi|169205567 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 32.7 bits (73), Expect = 0.13
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
Query: 30 CPHSCYRCRSRCCCCCRCSW 49
CP C C CCCCC C W
Sbjct: 152 CPGCCCCC---CCCCCCCCW 168
>gi|40786420 immunoglobulin-like domain containing receptor 2 [Homo
sapiens]
Length = 639
Score = 32.7 bits (73), Expect = 0.13
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 9/49 (18%)
Query: 25 PRGCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPRGLVRAGGPPSVRG 73
P CCC C C CCC L+ +AG PPSV G
Sbjct: 213 PHSCCCYVRCPCCPDSCCC---------PQALYEAGKAAKAGYPPSVSG 252
>gi|122937285 immunoglobulin superfamily 5 like [Homo sapiens]
Length = 407
Score = 32.7 bits (73), Expect = 0.13
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 9/23 (39%)
Query: 28 CCCPHSCYRCRSRCC---CCCRC 47
CCC CR RCC CCCRC
Sbjct: 287 CCC------CRRRCCGCNCCCRC 303
Score = 31.6 bits (70), Expect = 0.29
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Query: 26 RGCCCPHSCYRCR--SRCCCCCR 46
R CCC C C RCC CCR
Sbjct: 286 RCCCCRRRCCGCNCCCRCCFCCR 308
>gi|169204182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 32.3 bits (72), Expect = 0.17
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Query: 30 CPHSCYRCRSRCCCCCRCSW 49
CP C C CCCCC C W
Sbjct: 152 CPGCC--CCCCCCCCCCCCW 169
Score = 32.0 bits (71), Expect = 0.22
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Query: 27 GCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPRGLVR 64
GCCC C CCCCC C S G + VR
Sbjct: 154 GCCCCCCC------CCCCCCCWCCSCLGGISSSPSSVR 185
>gi|118572608 keratin associated protein 4-5 [Homo sapiens]
Length = 181
Score = 32.3 bits (72), Expect = 0.17
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 5/25 (20%)
Query: 26 RGCCCPHSCYR---CRSRCCC--CC 45
R CCC +C R CR+ CCC CC
Sbjct: 77 RPCCCQTTCCRTTCCRTTCCCPSCC 101
Score = 28.9 bits (63), Expect = 1.8
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 28 CCCPHSCYR--CRSRCC--CCCR 46
CCCP C CR +CC CC+
Sbjct: 95 CCCPSCCVSSCCRPQCCQSVCCQ 117
Score = 28.5 bits (62), Expect = 2.4
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
Query: 29 CCPHSC---YRCRSRCC--CCCR 46
CC SC Y C S CC CCC+
Sbjct: 60 CCISSCCRPYCCESSCCRPCCCQ 82
Score = 28.1 bits (61), Expect = 3.2
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Query: 12 SCVLHALASDLSGPRGCCCPHSCYR--CRSRCC---CCC 45
SC + + CC P C CR+ CC CCC
Sbjct: 59 SCCISSCCRPYCCESSCCRPCCCQTTCCRTTCCRTTCCC 97
Score = 26.9 bits (58), Expect = 7.0
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 12 SCVLHALASDLSGPRGCCCPHSCYR--CRSRCC--CCCR 46
SC + G CC P C CR+ CC CC+
Sbjct: 4 SCCGSVSSEQSCGLENCCRPSCCQTTCCRTTCCRPSCCK 42
Score = 26.9 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 4/19 (21%)
Query: 29 CCPHSCYRCRSRCC--CCC 45
CC SC C S CC CCC
Sbjct: 130 CCHPSC--CESSCCRPCCC 146
>gi|45545424 LISCH protein isoform 2 [Homo sapiens]
Length = 649
Score = 32.0 bits (71), Expect = 0.22
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 10/46 (21%)
Query: 29 CCPHSCYRCRSRCCCC---CRCSWHSYAGPLHGPRGLVRAGGPPSV 71
CCPH+C C RC CC C C YA G G PS+
Sbjct: 284 CCPHTCC-CYVRCPCCPDKCCCPEALYAA------GKAATSGVPSI 322
Score = 29.3 bits (64), Expect = 1.4
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 25 PRGCCCPHSCYRCRSRCCC 43
P CCC C C +CCC
Sbjct: 286 PHTCCCYVRCPCCPDKCCC 304
>gi|45505163 LISCH protein isoform 1 [Homo sapiens]
Length = 630
Score = 32.0 bits (71), Expect = 0.22
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 10/46 (21%)
Query: 29 CCPHSCYRCRSRCCCC---CRCSWHSYAGPLHGPRGLVRAGGPPSV 71
CCPH+C C RC CC C C YA G G PS+
Sbjct: 265 CCPHTCC-CYVRCPCCPDKCCCPEALYAA------GKAATSGVPSI 303
Score = 29.3 bits (64), Expect = 1.4
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 25 PRGCCCPHSCYRCRSRCCC 43
P CCC C C +CCC
Sbjct: 267 PHTCCCYVRCPCCPDKCCC 285
>gi|41281683 disabled homolog 2 interacting protein isoform 2 [Homo
sapiens]
Length = 1065
Score = 31.6 bits (70), Expect = 0.29
Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 23/110 (20%)
Query: 53 AGPLHGPRGLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDF 112
AG PRGL +G +H+ E LAAA + F STA E+
Sbjct: 713 AGLPLSPRGLGDSGSEGHSSLSSHSNSEELAAAAKLGSF-----------STAA---EEL 758
Query: 113 TRLPAARARPRVY------EPVTP---SRGESARLAARRPRPFPASPRPR 153
R P AR ++ +P P S G R+ P P P P PR
Sbjct: 759 ARRPGELARRQMSLTEKGGQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPR 808
>gi|94967023 disabled homolog 2 interacting protein isoform 1 [Homo
sapiens]
Length = 1132
Score = 31.6 bits (70), Expect = 0.29
Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 23/110 (20%)
Query: 53 AGPLHGPRGLVRAGGPPSVRGGTHATREPLAAAGRWSGFGPLLLQQTLCLSTACSTWEDF 112
AG PRGL +G +H+ E LAAA + F STA E+
Sbjct: 809 AGLPLSPRGLGDSGSEGHSSLSSHSNSEELAAAAKLGSF-----------STAA---EEL 854
Query: 113 TRLPAARARPRVY------EPVTP---SRGESARLAARRPRPFPASPRPR 153
R P AR ++ +P P S G R+ P P P P PR
Sbjct: 855 ARRPGELARRQMSLTEKGGQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPR 904
>gi|39752687 hypothetical protein LOC375791 [Homo sapiens]
Length = 144
Score = 31.6 bits (70), Expect = 0.29
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
Query: 28 CCCP--HSCYR---CRSRCCCCC 45
CCCP H C+ CR CCCC
Sbjct: 119 CCCPCCHCCHCPPFCRCHSCCCC 141
>gi|59709427 XK, Kell blood group complex subunit-related family,
member 4 [Homo sapiens]
Length = 650
Score = 31.6 bits (70), Expect = 0.29
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 10/49 (20%)
Query: 19 ASDLSGPRGCCCPHS--CYRCRSRCCCCCRCSWHSY----AGPLHGPRG 61
A D G CCP C SRCCCCC S S +G + GP G
Sbjct: 44 AEDEEAAGGGCCPDGGGC----SRCCCCCAGSGGSAGSGGSGGVAGPGG 88
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 31.6 bits (70), Expect = 0.29
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 27 GCCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPRGLVRAGG 67
GCC P C C+ CCC CS S G G +G+ + G
Sbjct: 34 GCCVPVCC--CKPVCCCVPACSCSS-CGSCGGSKGVCGSCG 71
Score = 26.9 bits (58), Expect = 7.0
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 10 SHSCVLHALASDLSGPRGCCCPHSCYR--CRSRCC--CCCRCS 48
S S S S + CCC C C+S CC CC + S
Sbjct: 156 SQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCSQSS 198
Score = 26.6 bits (57), Expect = 9.2
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 12 SCVLHALASDLSGPRGCCCPHSCYR-CRSRCC---CCCRCSWHS 51
SC + CC P C C S CC CC CS S
Sbjct: 183 SCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQS 226
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 31.2 bits (69), Expect = 0.37
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 102 LSTACSTWEDFTRLPAARARPRVYEPVTP---------SRG-ESARLAARRPRPFPASPR 151
L+ A S + + LP+ RA PR + P P RG E + L P P PASPR
Sbjct: 265 LNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPR 324
Query: 152 P 152
P
Sbjct: 325 P 325
>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 2 [Homo sapiens]
Length = 902
Score = 31.2 bits (69), Expect = 0.37
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 102 LSTACSTWEDFTRLPAARARPRVYEPVTP---------SRG-ESARLAARRPRPFPASPR 151
L+ A S + + LP+ RA PR + P P RG E + L P P PASPR
Sbjct: 202 LNEAASRFGLGSPLPSPRASPRPWTPEDPWSLYGPSPGGRGPEDSWLLLSAPGPTPASPR 261
Query: 152 P 152
P
Sbjct: 262 P 262
>gi|239756792 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 31.2 bits (69), Expect = 0.37
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
Query: 26 RGCCCPHSCYR---CRSRCCC--CC 45
R CC +CYR CR CCC CC
Sbjct: 154 RPTCCQTTCYRTTCCRPSCCCSPCC 178
Score = 26.6 bits (57), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 3/22 (13%)
Query: 28 CCCPHSCYRCRSRCCC---CCR 46
CC P C C CC CCR
Sbjct: 42 CCVPSCCQPCCHPTCCQNTCCR 63
>gi|239751312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 31.2 bits (69), Expect = 0.37
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
Query: 26 RGCCCPHSCYR---CRSRCCC--CC 45
R CC +CYR CR CCC CC
Sbjct: 154 RPTCCQTTCYRTTCCRPSCCCSPCC 178
Score = 26.6 bits (57), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 3/22 (13%)
Query: 28 CCCPHSCYRCRSRCCC---CCR 46
CC P C C CC CCR
Sbjct: 42 CCVPSCCQPCCHPTCCQNTCCR 63
>gi|239745809 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 31.2 bits (69), Expect = 0.37
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
Query: 26 RGCCCPHSCYR---CRSRCCC--CC 45
R CC +CYR CR CCC CC
Sbjct: 154 RPTCCQTTCYRTTCCRPSCCCSPCC 178
Score = 26.6 bits (57), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 3/22 (13%)
Query: 28 CCCPHSCYRCRSRCCC---CCR 46
CC P C C CC CCR
Sbjct: 42 CCVPSCCQPCCHPTCCQNTCCR 63
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 31.2 bits (69), Expect = 0.37
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 5/26 (19%)
Query: 28 CCCPHSC---YRCRSRCC--CCCRCS 48
CCC SC C+S CC CCC+ S
Sbjct: 166 CCCQSSCCVPVCCQSSCCKPCCCQSS 191
Score = 30.4 bits (67), Expect = 0.64
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Query: 28 CCCPHSCYR-CRSRCC--CCCRCS 48
CCC C C+S CC CCC+ S
Sbjct: 148 CCCSSGCGSCCQSSCCNPCCCQSS 171
Score = 28.5 bits (62), Expect = 2.4
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 28 CCCPHSCYRCRSRCCCCCRCSWHSYAGPLHGPRG 61
CC P C C+ CCC CS S G G +G
Sbjct: 42 CCVPVCC--CKPVCCCVPACSCSS-CGSCGGSKG 72
>gi|86990435 G protein signalling regulator 19 [Homo sapiens]
Length = 217
Score = 30.8 bits (68), Expect = 0.49
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 8/35 (22%)
Query: 16 HALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWH 50
H AS + R CC C+ CCCC CSW+
Sbjct: 26 HDTASPAAPSRNPCC--LCW------CCCCSCSWN 52
>gi|5031705 G protein signalling regulator 19 [Homo sapiens]
Length = 217
Score = 30.8 bits (68), Expect = 0.49
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 8/35 (22%)
Query: 16 HALASDLSGPRGCCCPHSCYRCRSRCCCCCRCSWH 50
H AS + R CC C+ CCCC CSW+
Sbjct: 26 HDTASPAAPSRNPCC--LCW------CCCCSCSWN 52
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.137 0.488
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,220,366
Number of Sequences: 37866
Number of extensions: 448856
Number of successful extensions: 3292
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 2861
Number of HSP's gapped (non-prelim): 554
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.