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Search of human proteins with 239754742
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
(132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens] 274 1e-74
gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] 126 4e-30
gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] 123 4e-29
gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo ... 80 6e-16
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens] 75 2e-14
gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens] 75 2e-14
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ... 75 2e-14
gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens] 72 1e-13
gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens] 69 8e-13
gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens] 60 4e-10
gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens] 56 9e-09
gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens] 55 2e-08
gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo ... 55 2e-08
gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens] 50 5e-07
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 46 1e-05
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 46 1e-05
gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens] 45 2e-05
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 44 4e-05
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 44 4e-05
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 44 4e-05
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 43 8e-05
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 43 8e-05
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 43 8e-05
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 43 8e-05
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 43 8e-05
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 42 2e-04
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 42 2e-04
gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] 41 2e-04
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 41 2e-04
gi|9507239 immunoglobulin iota chain precursor [Homo sapiens] 41 2e-04
>gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
Length = 132
Score = 274 bits (701), Expect = 1e-74
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL
Sbjct: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
Query: 61 GLQLIYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSASW 120
GLQLIYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSASW
Sbjct: 61 GLQLIYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSASW 120
Query: 121 PPALYTERQTHG 132
PPALYTERQTHG
Sbjct: 121 PPALYTERQTHG 132
>gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]
Length = 235
Score = 126 bits (317), Expect = 4e-30
Identities = 60/109 (55%), Positives = 78/109 (71%)
Query: 5 LFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQL 64
L CGAF LL G ++A VTQTP+ R+ KTG+ + L C+Q H+ MYWYRQDPG+GL+L
Sbjct: 19 LLCCGAFSLLWAGPVNAGVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGMGLRL 78
Query: 65 IYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
I+YS KGE+ DGY+VSR + F L LESA P+QT++YFCA+S
Sbjct: 79 IHYSVGEGTTAKGEVPDGYNVSRLKKQNFLLGLESAAPSQTSVYFCASS 127
>gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]
Length = 132
Score = 123 bits (309), Expect = 4e-29
Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Query: 4 LLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQ 63
LL + G FY LG G M+AD+ QTPR + TGK+I LECSQT GHD+MYWY+QDPG+ L
Sbjct: 5 LLCYMG-FYFLGAGLMEADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMELH 63
Query: 64 LIYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSD 114
LI+YS+ V KG++S +VSR F L+LESA P+ T+ Y CA+S+
Sbjct: 64 LIHYSYGVNSTEKGDLSSESTVSRIRTEHFPLTLESARPSHTSQYLCASSE 114
>gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
sapiens]
Length = 245
Score = 79.7 bits (195), Expect = 6e-16
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
M + L F AF LLG A V+Q+P N++T+ GK + L C GH +YWYRQ G
Sbjct: 81 MGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQ 140
Query: 61 GLQ-LIYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSAS 119
GL+ LIY+ + G SD +S R + +L+++ +A+Y CA+S + +
Sbjct: 141 GLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASS--LATA 198
Query: 120 WPPALYTERQTH 131
W L + H
Sbjct: 199 WHSRLLPAHKPH 210
>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
Length = 167
Score = 74.7 bits (182), Expect = 2e-14
Identities = 39/104 (37%), Positives = 56/104 (53%)
Query: 10 AFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQLIYYSF 69
A LLGTG DA V Q PR ++T+ GK + L CSQT H+ MYWY+Q +L+++ +
Sbjct: 10 ALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYY 69
Query: 70 DVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
D N+ + D + R + L + S A+Y CATS
Sbjct: 70 DKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATS 113
>gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
Length = 170
Score = 74.7 bits (182), Expect = 2e-14
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
MA+ L C LLG +DA VTQTPR+++T+ G+ + + C GH+ ++WYRQ
Sbjct: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
Query: 61 GLQLIYYSFDVKDI-NKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCAT 112
GL+L+ Y + + + G D +S +L ++ + P +A+YFCA+
Sbjct: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCAS 113
>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
sapiens]
Length = 167
Score = 74.7 bits (182), Expect = 2e-14
Identities = 39/104 (37%), Positives = 56/104 (53%)
Query: 10 AFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQLIYYSF 69
A LLGTG DA V Q PR ++T+ GK + L CSQT H+ MYWY+Q +L+++ +
Sbjct: 10 ALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYY 69
Query: 70 DVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
D N+ + D + R + L + S A+Y CATS
Sbjct: 70 DKDFNNEADTPDNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATS 113
>gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
Length = 189
Score = 72.4 bits (176), Expect = 1e-13
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
M S C + +L DA V Q+PR+ +T+ G+ + L C GHD ++WYRQ
Sbjct: 38 MDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMR 97
Query: 61 GLQ-LIYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
GL+ LIY++ +V + G D +S + +L ++ + P +A+YFCA+S
Sbjct: 98 GLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASS 151
>gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
Length = 182
Score = 69.3 bits (168), Expect = 8e-13
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
M + + C LLG G +A V Q PR+ + + G+ L CS KGH +YWYRQ P
Sbjct: 34 MDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEE 93
Query: 61 GLQLIYYSFDVKDINK-GEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
GL+ + Y I++ G + +S + L ++ + +A YFCA+S
Sbjct: 94 GLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASS 147
>gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]
Length = 179
Score = 60.5 bits (145), Expect = 4e-10
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 8 CGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQ-LIY 66
C F L T ++A VTQ P + + + G+ + L C GHD +YWYR+ G ++ L++
Sbjct: 3 CILFLSLPTEHIEAGVTQFPSHSVIEKGQTVTLRCDPISGHDNLYWYRRVMGKEIKFLLH 62
Query: 67 YSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSD---LHS 117
+ + K G ++ + R +L ++ A + +YFCA+S LHS
Sbjct: 63 FVKESKQDESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYFCASSQDTVLHS 116
>gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
Length = 135
Score = 55.8 bits (133), Expect = 9e-09
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 13 LLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQ-LIYYSFDV 71
LL G + V+QTPR+++T G+ ++L C + GH ++WYRQ+ ++ LI + +
Sbjct: 13 LLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKLLISFQYQN 72
Query: 72 KDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALY 108
++ G + ++ R +L + A P +A+Y
Sbjct: 73 IAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVY 109
>gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens]
Length = 147
Score = 55.1 bits (131), Expect = 2e-08
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
M + L AF LL ++A V Q+PR +I + + + C+ GH+ +YWY Q+ G
Sbjct: 30 MGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQ 89
Query: 61 GLQLIYYSFDVKDINKGEI-SDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
G +L+ + + ++ ++ D +S R +L ++ A +A+Y CA+S
Sbjct: 90 GPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASS 143
>gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo
sapiens]
Length = 118
Score = 55.1 bits (131), Expect = 2e-08
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
M + L AF LL ++A V Q+PR +I + + + C+ GH+ +YWY Q+ G
Sbjct: 1 MGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQ 60
Query: 61 GLQLIYYSFDVKDINKGEI-SDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
G +L+ + + ++ ++ D +S R +L ++ A +A+Y CA+S
Sbjct: 61 GPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASS 114
>gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
Length = 122
Score = 50.1 bits (118), Expect = 5e-07
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 13 LLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQLIYYSFDVK 72
LL GS +V QTP++ + G++ L C+ KGH ++WY+Q + + SF +
Sbjct: 13 LLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFL-ISFQNE 71
Query: 73 DI--NKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
++ G + +S + SL +++ +A+YFCA+S
Sbjct: 72 NVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASS 114
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 45.8 bits (107), Expect = 1e-05
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D +TQ+P + G R+ + C ++G + + WY+Q PG +L+ Y+ + G
Sbjct: 193 DIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPGKTPKLLIYA--ASSLQSG- 249
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSASWPPAL 124
I +S S A ++L++ S P A Y+C SD S PP +
Sbjct: 250 IPSRFSDSGSG-ADYTLTISSLQPEDFAAYYCQQSD----STPPTV 290
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 45.8 bits (107), Expect = 1e-05
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D +TQ+P + G R+ + C ++G + + WY+Q PG +L+ Y+ + G
Sbjct: 534 DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLIYA--ASSLQSG- 590
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSASWPP 122
I +S S A ++L++ S P A Y+C SD S PP
Sbjct: 591 IPSRFSDSGSG-ADYTLTIRSLQPEDFATYYCQQSD----STPP 629
>gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]
Length = 170
Score = 44.7 bits (104), Expect = 2e-05
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 13 LLGTGS-MDADVTQTPRNRITKTGKRIMLECSQTKGH-DRMYWYRQDPGLGLQLIYYSFD 70
LLG GS + A V+Q P I K+G + +EC M+WYRQ P L L+ S +
Sbjct: 26 LLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNE 85
Query: 71 --VKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSD 114
+G D + ++ + +L++ SA P ++ Y C+ D
Sbjct: 86 GSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARD 131
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 43.9 bits (102), Expect = 4e-05
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D +TQ+P + G R+ + C ++G + + WY+Q PG +L+ Y+ + G
Sbjct: 194 DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLIYA--ASSLQSG- 250
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSD 114
I +S S ++L++ S P A Y+C SD
Sbjct: 251 IPSRFSDSGSG-TDYTLTISSLQPEDFATYYCQQSD 285
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 43.9 bits (102), Expect = 4e-05
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D +TQ+P + G R+ + C ++G + + WY+Q PG +L+ Y+ + G
Sbjct: 140 DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLIYA--ASSLQSG- 196
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSD 114
I +S S ++L++ S P A Y+C SD
Sbjct: 197 IPSRFSDSGSG-TDYTLTISSLQPEDFATYYCQQSD 231
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 43.9 bits (102), Expect = 4e-05
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D +TQ+P + G R+ + C ++G + + WY+Q PG +L+ Y+ + G
Sbjct: 140 DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLIYA--ASSLQSG- 196
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSD 114
I +S S ++L++ S P A Y+C SD
Sbjct: 197 IPSRFSDSGSG-TDYTLTISSLQPEDFATYYCQQSD 231
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 42.7 bits (99), Expect = 8e-05
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D VTQ+P + G R+ + C ++G + + WY+Q PG L+ Y+ + G
Sbjct: 23 DIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTLLIYA--ASSLQSG- 79
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFC 110
+ +S S F+L++ S P A Y+C
Sbjct: 80 VPSRFSGSGSG-TDFTLTISSLQPEDVATYYC 110
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 42.7 bits (99), Expect = 8e-05
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 23 VTQTPRNRITKTGKRIMLEC--SQTKGHDRMYWYRQDPGLGLQLIYYSFDVKDINKGEIS 80
+TQ+P G+R L C SQ+ + WY+Q PGL +L+ Y + I
Sbjct: 24 LTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATG---IP 80
Query: 81 DGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSASWPPALYTERQT 130
D +S S F+L++ P A+Y+C + +S P + E +T
Sbjct: 81 DRFSGSGSG-TDFTLTISRLEPEDFAVYYC---QQYGSSPPTVIQLETKT 126
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 42.7 bits (99), Expect = 8e-05
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 23 VTQTPRNRITKTGKRIMLEC--SQTKGHDRMYWYRQDPGLGLQLIYYSFDVKDINKGEIS 80
+TQ+P G+R L C SQ+ + WY+Q PGL +L+ Y + I
Sbjct: 24 LTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIYDASSRATG---IP 80
Query: 81 DGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSASWPPALYTERQT 130
D +S S F+L++ P A+Y+C + +S P + E +T
Sbjct: 81 DRFSGSGSG-TDFTLTISRLEPEDFAVYYC---QQYGSSPPTVIQLETKT 126
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 42.7 bits (99), Expect = 8e-05
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D VTQ+P + G R+ + C ++G + + WY+Q PG L+ Y+ + G
Sbjct: 23 DIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTLLIYA--ASSLQSG- 79
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFC 110
+ +S S F+L++ S P A Y+C
Sbjct: 80 VPSRFSGSGSG-TDFTLTISSLQPEDVATYYC 110
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 42.7 bits (99), Expect = 8e-05
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D VTQ+P + G R+ + C ++G + + WY+Q PG L+ Y+ + G
Sbjct: 23 DIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTLLIYA--ASSLQSG- 79
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFC 110
+ +S S F+L++ S P A Y+C
Sbjct: 80 VPSRFSGSGSG-TDFTLTISSLQPEDVATYYC 110
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 41.6 bits (96), Expect = 2e-04
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 5 LFFCGAFYLLGTGSM----DADVTQTPRNRITKTGKRIMLEC--SQTKGHDRMYWYRQDP 58
L F +L G G+M + +TQ+P G+R L C SQ+ + WY+Q P
Sbjct: 7 LLFLLLLWLPGEGNMRYHGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKP 66
Query: 59 GLGLQLIYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFC 110
G +L+ Y + I +S S F+L++ S P A+Y+C
Sbjct: 67 GQAPRLLIYGASTRATG---IPARFSGSGSG-TDFTLTISSLQPEDFAVYYC 114
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 41.6 bits (96), Expect = 2e-04
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D +TQ+P + G R+ + C ++G + + WY+Q PG +L+ Y+ + G
Sbjct: 32 DIQMTQSPSSLSASVGDRVTITCRASQGISNSLAWYQQKPGKAPKLLLYA--ASRLESG- 88
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSASWPPALYTERQT 130
+ +S S ++L++ S P A Y+C + ++ P L+T +T
Sbjct: 89 VPSRFSGSGSG-TDYTLTISSLQPEDFATYYC---QQYYSTPPTVLHTRTKT 136
>gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]
Length = 288
Score = 41.2 bits (95), Expect = 2e-04
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 15 GTGSMDADVTQTPRNRITKTGKRIMLECSQTK----GHDRMYWYRQDPGLGLQLIYYSFD 70
GTGS P + G+ I + C+ T G++ + WY+Q PG +L+ Y D
Sbjct: 14 GTGSWAQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIY--D 71
Query: 71 VKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFC----ATSDLHSASWPPALYT 126
V + G +S+ +S S+ SL++ A Y+C ++S LHS P + T
Sbjct: 72 VSNRPSG-VSNRFSGSKSGNTA-SLTISGLQAEDEADYYCSSYTSSSTLHSG--PSSWGT 127
Query: 127 ERQT 130
E +T
Sbjct: 128 ETKT 131
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 41.2 bits (95), Expect = 2e-04
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 20 DADVTQTPRNRITKTGKRIMLECSQTKG-HDRMYWYRQDPGLGLQLIYYSFDVKDINKGE 78
D +TQ+P G R+ + C ++G + WY+Q PG +L+ Y+ + G
Sbjct: 23 DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYA--ASTLQSG- 79
Query: 79 ISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSASWPPAL 124
+ +S S +F+L++ S P A Y+C + S+PP +
Sbjct: 80 VPSRFSGSGSG-TEFTLTISSLQPEDFATYYCQQLN----SYPPTV 120
>gi|9507239 immunoglobulin iota chain precursor [Homo sapiens]
Length = 145
Score = 41.2 bits (95), Expect = 2e-04
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 16 TGSMDADVTQTPRNRITKTGKRIMLECSQTKGHD----RMYWYRQDPGLGLQLIYYSFDV 71
TG V P + G I L C+ HD +YWY+Q PG + + F
Sbjct: 15 TGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQ 74
Query: 72 KDINKG-EISDGYSVSRQ-AQAKFSLSLESAIPNQTALYFCA 111
D ++G ++ +S S+ A+ + LS+ P A+Y+CA
Sbjct: 75 SDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCA 116
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,843,418
Number of Sequences: 37866
Number of extensions: 171595
Number of successful extensions: 448
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 396
Number of HSP's gapped (non-prelim): 83
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.