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Search of human proteins with 239754734
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
(122 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens] 252 6e-68
gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens] 124 1e-29
gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens] 104 2e-23
gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens] 100 5e-22
gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens] 99 8e-22
gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens] 99 8e-22
gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo ... 96 5e-21
gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens] 86 7e-18
gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo ... 86 7e-18
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens] 64 4e-11
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ... 64 4e-11
gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] 56 6e-09
gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] 54 2e-08
gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens] 50 4e-07
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 40 3e-04
gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens] 40 6e-04
gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] 38 0.002
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens] 38 0.002
gi|7019567 pre-B lymphocyte 3 [Homo sapiens] 37 0.003
gi|9507239 immunoglobulin iota chain precursor [Homo sapiens] 36 0.006
gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens] 36 0.008
gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens] 36 0.008
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 36 0.008
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 35 0.011
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 35 0.011
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 35 0.014
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 35 0.014
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 35 0.014
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 35 0.018
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 34 0.024
>gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
Length = 122
Score = 252 bits (643), Expect = 6e-68
Identities = 122/122 (100%), Positives = 122/122 (100%)
Query: 1 MSPIFTCITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKN 60
MSPIFTCITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKN
Sbjct: 1 MSPIFTCITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKN 60
Query: 61 EFKFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVLN 120
EFKFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVLN
Sbjct: 61 EFKFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVLN 120
Query: 121 IS 122
IS
Sbjct: 121 IS 122
>gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
Length = 182
Score = 124 bits (312), Expect = 1e-29
Identities = 57/113 (50%), Positives = 76/113 (67%)
Query: 7 CITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLI 66
C ++CLL AG V Q P+HLVR GQ+A+L C+P+KGHS+V+WY+Q+ + KF++
Sbjct: 40 CCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEEGLKFMV 99
Query: 67 SFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVL 119
Q EN+ DE+GMPKERFSA+ P L IQ DSA YFCASS T++
Sbjct: 100 YLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLM 152
>gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
Length = 189
Score = 104 bits (259), Expect = 2e-23
Identities = 54/114 (47%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 7 CITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLI 66
C LC+L A V Q+P+H V GQ+ L C PI GH Y+FWY+Q + + LI
Sbjct: 44 CCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELLI 103
Query: 67 SFQNENVFDETGMPKERFSAKCLPNSPCS-LEIQATKLEDSAVYFCASSQSTVL 119
F N D++GMP++RFSAK +PN+ S L+IQ ++ DSAVYFCASS +T L
Sbjct: 104 YFNNNVPIDDSGMPEDRFSAK-MPNASFSTLKIQPSEPRDSAVYFCASSLATAL 156
>gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
Length = 170
Score = 99.8 bits (247), Expect = 5e-22
Identities = 50/119 (42%), Positives = 69/119 (57%)
Query: 1 MSPIFTCITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKN 60
M+ C +LCLL V QTP+H V GQ+ + C PI GH+ VFWY+Q +
Sbjct: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
Query: 61 EFKFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVL 119
+ L F+N D++GMPK+RFSA+ + +L+IQ ++ DSAVYFCAS T L
Sbjct: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTAL 119
>gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
Length = 135
Score = 99.0 bits (245), Expect = 8e-22
Identities = 51/114 (44%), Positives = 70/114 (61%)
Query: 7 CITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLI 66
C LCLLAAG V+QTP+H V GQ+ L C P GH +V WY+Q L+ E K LI
Sbjct: 7 CWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKLLI 66
Query: 67 SFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVLN 120
SFQ +N+ ++GMPKERF+A+ + +L+I + DSAVY +S + L+
Sbjct: 67 SFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLS 120
>gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]
Length = 179
Score = 99.0 bits (245), Expect = 8e-22
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 12 CLLAAGSPGEE----VAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLIS 67
C+L P E V Q P H V +GQ L C PI GH ++WY++V+ E KFL+
Sbjct: 3 CILFLSLPTEHIEAGVTQFPSHSVIEKGQTVTLRCDPISGHDNLYWYRRVMGKEIKFLLH 62
Query: 68 FQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVLN 120
F E+ DE+GMP RF A+ + +L++Q +LEDS VYFCASSQ TVL+
Sbjct: 63 FVKESKQDESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYFCASSQDTVLH 115
>gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
sapiens]
Length = 245
Score = 96.3 bits (238), Expect = 5e-21
Identities = 48/106 (45%), Positives = 68/106 (64%)
Query: 12 CLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLISFQNE 71
CLL A G V+Q+P + V +G+ +L C PI GH+ ++WY+Q L +FLI FQ
Sbjct: 92 CLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQGLEFLIYFQGN 151
Query: 72 NVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQST 117
+ D++G+P +RFSA+ S +L IQ T+ EDSAVY CASS +T
Sbjct: 152 SAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLAT 197
>gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens]
Length = 147
Score = 85.9 bits (211), Expect = 7e-18
Identities = 44/112 (39%), Positives = 64/112 (57%)
Query: 7 CITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLI 66
C CLL V Q+P++ + + Q +C PI GH+ ++WY Q L + LI
Sbjct: 36 CWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQGPELLI 95
Query: 67 SFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTV 118
++NE D++ +PK+RFSA+ L +L+IQ +L DSAVY CASS TV
Sbjct: 96 RYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSLDTV 147
>gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo
sapiens]
Length = 118
Score = 85.9 bits (211), Expect = 7e-18
Identities = 44/112 (39%), Positives = 64/112 (57%)
Query: 7 CITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLI 66
C CLL V Q+P++ + + Q +C PI GH+ ++WY Q L + LI
Sbjct: 7 CWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQGPELLI 66
Query: 67 SFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTV 118
++NE D++ +PK+RFSA+ L +L+IQ +L DSAVY CASS TV
Sbjct: 67 RYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSLDTV 118
>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
Length = 167
Score = 63.5 bits (153), Expect = 4e-11
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 11 LCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLISFQN 70
LCLL G V Q P++ V G+ L C+ H+ ++WYQQ K L + +
Sbjct: 11 LCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYYD 70
Query: 71 ENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVL 119
++ +E P + F ++ S C L+I++ L D+A+Y CA+S+ T L
Sbjct: 71 KDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTEL 118
>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
sapiens]
Length = 167
Score = 63.5 bits (153), Expect = 4e-11
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 11 LCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLISFQN 70
LCLL G V Q P++ V G+ L C+ H+ ++WYQQ K L + +
Sbjct: 11 LCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYYD 70
Query: 71 ENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVL 119
++ +E P + F ++ S C L+I++ L D+A+Y CA+S+ T L
Sbjct: 71 KDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTEL 118
>gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]
Length = 235
Score = 56.2 bits (134), Expect = 6e-09
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 1 MSPIFTCITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKN 60
MS C LL AG V QTPK V GQ L CA H Y++WY+Q
Sbjct: 15 MSLGLLCCGAFSLLWAGPVNAGVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGM 74
Query: 61 EFKFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVLN 120
+ + E + +P + ++ L L +++ ++VYFCASS STVL+
Sbjct: 75 GLRLIHYSVGEGTTAKGEVP-DGYNVSRLKKQNFLLGLESAAPSQTSVYFCASSYSTVLH 133
>gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]
Length = 132
Score = 54.3 bits (129), Expect = 2e-08
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 8 ITILC-----LLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEF 62
I +LC L AG ++ QTP++LV G G+K L C+ GH ++WYQQ E
Sbjct: 3 IRLLCYMGFYFLGAGLMEADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGMEL 62
Query: 63 KFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVLN 120
+ N ++ + E ++ + L +++ + ++ Y CASS+ TVL+
Sbjct: 63 HLIHYSYGVNSTEKGDLSSESTVSR-IRTEHFPLTLESARPSHTSQYLCASSEYTVLH 119
>gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
Length = 132
Score = 50.1 bits (118), Expect = 4e-07
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 13 LLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFL-ISFQNE 71
LL GS +V QTP++ + G++ L C+ KGH ++WY+Q + + SF +
Sbjct: 13 LLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQLIYYSFDVK 72
Query: 72 NVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASS 114
++ G + +S + SL +++ +A+YFCA+S
Sbjct: 73 DI--NKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
sapiens]
Length = 264
Score = 40.4 bits (93), Expect = 3e-04
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 5 FTCITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIK---GHSYVFWYQQVLKNE 61
F + L AGS + V P GQ+ + C+ G + V WYQQ+
Sbjct: 30 FPLLLTLLTHCAGSWAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTA 89
Query: 62 FKFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCAS 113
K LI N+ +G+P +RFS S SL I + ED A Y+CA+
Sbjct: 90 PKLLIYSNNQR---PSGVP-DRFSGSKSGTS-ASLAISGLQSEDEADYYCAA 136
>gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]
Length = 170
Score = 39.7 bits (91), Expect = 6e-04
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 8 ITILCLLAAGSP-GEEVAQTPKHLVRGEGQKAKLYCAPIKGHSY-VFWYQQVLKNEFKFL 65
+ +L LL GS G V+Q P ++ G K+ C + + +FWY+Q K +
Sbjct: 21 LLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLM 80
Query: 66 I-SFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCAS 113
S + E G+ K++F + +L + + EDS+ Y C++
Sbjct: 81 ATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSA 129
>gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]
Length = 288
Score = 38.1 bits (87), Expect = 0.002
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)
Query: 17 GSPGEEVAQTPKHLVRGEGQKAKLYC----APIKGHSYVFWYQQVLKNEFKFLISFQNEN 72
GS + P + GQ + C + + G++YV WYQQ K +I
Sbjct: 16 GSWAQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMI------ 69
Query: 73 VFDETGMPK---ERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQST 117
+D + P RFS N+ SL I + ED A Y+C+S S+
Sbjct: 70 -YDVSNRPSGVSNRFSGSKSGNT-ASLTISGLQAEDEADYYCSSYTSS 115
>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
Length = 645
Score = 38.1 bits (87), Expect = 0.002
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 3 PIFTCITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCA-PIKGHSYVFWYQQVLKNE 61
P+ + ILC ++ S E+ Q P + GQ A++ C+ + Y W+QQ
Sbjct: 474 PLLLPLLILCTVSVAS--YELTQ-PSSVSVSPGQTARITCSGDVLAKKYARWFQQKPGQA 530
Query: 62 FKFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVLNI 121
+I +E +G+P ERFS + +L I ++ED A Y+C S+ L +
Sbjct: 531 PVLVIYKDSER---PSGIP-ERFSGSS-SGTTVTLTISGAQVEDEADYYCYSAADNNLTV 585
Query: 122 S 122
+
Sbjct: 586 T 586
>gi|7019567 pre-B lymphocyte 3 [Homo sapiens]
Length = 123
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 7 CITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSY-----VFWYQQVLKNE 61
C++ L + S + V L+ GQ A+L C H V WYQQ +
Sbjct: 5 CLSFLLMGTFLSVSQTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSA 64
Query: 62 FKFLISFQNENVFDETGMPKERFSA-KCLPNSPCSLEIQATKLEDSAVYFCA 112
++L+ +++E +RFSA K ++ C L I + ED A Y+C+
Sbjct: 65 PRYLLYYRSEEDHHRPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCS 116
>gi|9507239 immunoglobulin iota chain precursor [Homo sapiens]
Length = 145
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Query: 2 SPIFTCITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSY----VFWYQQV 57
+P+ + + C G + V P + G +L C H V+WYQQ
Sbjct: 4 APVLLMLFVYC---TGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60
Query: 58 LKNEFKFLISFQNENVFDETGMPKERFS-AKCLPNSPCSLEIQATKLEDSAVYFCA 112
+ +FL+ + +++ + RFS +K + + L I + ED A+Y+CA
Sbjct: 61 PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCA 116
>gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 35.8 bits (81), Expect = 0.008
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 17 GSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSY----VFWYQQVLKNEFKFLISFQNEN 72
GS + V P L G A+ C G + ++WYQQ + ++L+ +++++
Sbjct: 16 GSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDS 75
Query: 73 VFDE-TGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCA 112
+ +G+P +K + L I + ED A Y+CA
Sbjct: 76 DKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
>gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 35.8 bits (81), Expect = 0.008
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 17 GSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSY----VFWYQQVLKNEFKFLISFQNEN 72
GS + V P L G A+ C G + ++WYQQ + ++L+ +++++
Sbjct: 16 GSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDS 75
Query: 73 VFDE-TGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCA 112
+ +G+P +K + L I + ED A Y+CA
Sbjct: 76 DKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 35.8 bits (81), Expect = 0.008
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 10 ILCLLAAGSPGEEV-AQTPKHLVRGEGQKAKLYCAPIKG--HSYVFWYQQVLKNEFKFLI 66
+L L + GE V Q+P L G++A L C + SY+ WYQQ + LI
Sbjct: 10 LLLLWLPDTTGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQAPRLLI 69
Query: 67 SFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFC 111
+ TG+P RFS + +L I + + ED AVY+C
Sbjct: 70 YGASTRA---TGIPA-RFSGSG-SGTDFTLTISSLQPEDFAVYYC 109
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 35.4 bits (80), Expect = 0.011
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Query: 10 ILCLLAAGSPGEE---------VAQTPKHLVRGEGQKAKLYCAPIKG--HSYVFWYQQVL 58
+L LL PGE + Q+P L G++A L C + SY+ WYQQ
Sbjct: 7 LLFLLLLWLPGEGNMRYHGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKP 66
Query: 59 KNEFKFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFC 111
+ LI + TG+P RFS + +L I + + ED AVY+C
Sbjct: 67 GQAPRLLIYGASTRA---TGIPA-RFSGSG-SGTDFTLTISSLQPEDFAVYYC 114
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 35.4 bits (80), Expect = 0.011
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 10 ILCLLAAGSPGE----EVAQTPKHLVRGEGQKAKLYCAPIKGHSY-VFWYQQVLKNEFKF 64
+L LL PG ++ Q+P L G + + C +G S + WYQQ K
Sbjct: 520 LLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKL 579
Query: 65 LISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQST 117
LI + ++G+P RFS + +L I++ + ED A Y+C S ST
Sbjct: 580 LIYAASSL---QSGIPS-RFSDSG-SGADYTLTIRSLQPEDFATYYCQQSDST 627
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 35.0 bits (79), Expect = 0.014
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 10 ILCLLAAGSPGE----EVAQTPKHLVRGEGQKAKLYCAPIKGHSY-VFWYQQVLKNEFKF 64
+L LL PG ++ Q+P L G + + C +G S + WYQQ K
Sbjct: 180 LLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKL 239
Query: 65 LISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQST 117
LI + ++G+P RFS + +L I + + ED A Y+C S ST
Sbjct: 240 LIYAASSL---QSGIPS-RFSDSG-SGTDYTLTISSLQPEDFATYYCQQSDST 287
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 35.0 bits (79), Expect = 0.014
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 10 ILCLLAAGSPGE----EVAQTPKHLVRGEGQKAKLYCAPIKGHSY-VFWYQQVLKNEFKF 64
+L LL PG ++ Q+P L G + + C +G S + WYQQ K
Sbjct: 126 LLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKL 185
Query: 65 LISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQST 117
LI + ++G+P RFS + +L I + + ED A Y+C S ST
Sbjct: 186 LIYAASSL---QSGIPS-RFSDSG-SGTDYTLTISSLQPEDFATYYCQQSDST 233
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 35.0 bits (79), Expect = 0.014
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 10 ILCLLAAGSPGE----EVAQTPKHLVRGEGQKAKLYCAPIKGHSY-VFWYQQVLKNEFKF 64
+L LL PG ++ Q+P L G + + C +G S + WYQQ K
Sbjct: 126 LLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKL 185
Query: 65 LISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQST 117
LI + ++G+P RFS + +L I + + ED A Y+C S ST
Sbjct: 186 LIYAASSL---QSGIPS-RFSDSG-SGTDYTLTISSLQPEDFATYYCQQSDST 233
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 34.7 bits (78), Expect = 0.018
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 10 ILCLLAAGSPGE----EVAQTPKHLVRGEGQKAKLYCAPIKGHSY-VFWYQQVLKNEFKF 64
+L LL PG ++ Q+P L G + + C +G S + WYQQ + K
Sbjct: 645 LLGLLGLWLPGARCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPRKTPKL 704
Query: 65 LISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQS---TVLNI 121
LI + ++G+P RFS + +L I + + ED A Y+C S S TVL +
Sbjct: 705 LIYAASSL---QSGIPS-RFSDSG-SGTDYTLTISSLQPEDFATYYCQQSDSNPPTVLQV 759
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 34.3 bits (77), Expect = 0.024
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 10 ILCLLAAGSPGE----EVAQTPKHLVRGEGQKAKLYCAPIKGHSY-VFWYQQVLKNEFKF 64
+L LL PG ++ Q+P L G + + C +G S + WYQQ + K
Sbjct: 160 LLGLLGLWLPGVRCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPRKTPKL 219
Query: 65 LISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQS---TVLNI 121
LI + ++G+P RFS + +L I + + ED A Y+C S S TVL +
Sbjct: 220 LIYAASSL---QSGIPS-RFSDSG-SGTDYTLTISSLQPEDFATYYCQQSDSNPPTVLQV 274
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,826,833
Number of Sequences: 37866
Number of extensions: 194534
Number of successful extensions: 632
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 590
Number of HSP's gapped (non-prelim): 69
length of query: 122
length of database: 18,247,518
effective HSP length: 89
effective length of query: 33
effective length of database: 14,877,444
effective search space: 490955652
effective search space used: 490955652
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.