Guide to the Human Genome
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Name: LOC651536 Sequence: fasta or formatted (150aa) NCBI GI: 169217719
Description:

PREDICTED: similar to hCG96018

Referenced in:

B cells

Other entries for this name:
alt mRNA [150aa] PREDICTED: similar to hCG96018
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          8           1
 C cysteine            3.3          5           1
 D aspartate           4.0          6           1
 E glutamate           1.3          2           1
 F phenylalanine       2.7          4           1
 G glycine             8.0         12           1
 H histidine           2.7          4           1
 I isoleucine          3.3          5           1
 K lysine              4.0          6           1
 L leucine            11.3         17           4
 M methionine          0.7          1           1
 N asparagine          1.3          2           1
 P proline             5.3          8           1
 Q glutamine           4.7          7           2
 R arginine            4.0          6           1
 S serine             18.0         27           2
 T threonine           9.3         14           1
 V valine              2.7          4           1
 W tryptophan          2.7          4           1
 Y tyrosine            5.3          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG96018 
LOC651536             1.000   PREDICTED: similar to hCG96018 
VPREB1                0.413   immunoglobulin iota chain precursor 
LOC100293277          0.344   PREDICTED: similar to hCG2040021 
LOC100290481          0.340   PREDICTED: hypothetical protein XP_002348153 
LOC100293440          0.316   PREDICTED: similar to Ig lambda chain 
LOC100293142          0.264   PREDICTED: similar to hCG2040019 
VPREB3                0.257   pre-B lymphocyte 3 
LOC440871             0.170   PREDICTED: similar to hCG2043206 
LOC650405             0.167   PREDICTED: similar to hCG2042707 
LOC100291682          0.156   PREDICTED: similar to hCG1686089 
LOC100290992          0.156   PREDICTED: hypothetical protein XP_002347049 
LOC100130100          0.156   PREDICTED: similar to hCG26659 
LOC100291464          0.156   PREDICTED: hypothetical protein XP_002346449 
LOC100130100          0.156   PREDICTED: similar to hCG26659 
LOC100291786          0.146   PREDICTED: similar to hCG2043206 
LOC652493             0.146   PREDICTED: similar to pre-B lymphocyte gene 1 [Homo...
LOC642424             0.142   PREDICTED: similar to hCG1742442 
LOC642424             0.142   PREDICTED: similar to hCG1742442 
LOC642424             0.142   PREDICTED: similar to hCG1742442 
LOC100291027          0.139   PREDICTED: hypothetical protein XP_002348323 
LOC642838             0.135   PREDICTED: similar to hCG1742442 
LOC100287723          0.135   PREDICTED: hypothetical protein XP_002342271 
LOC100132426          0.125   PREDICTED: similar to hCG1742442 
LOC100288993          0.125   PREDICTED: hypothetical protein XP_002342967 
LOC439957             0.118   PREDICTED: similar to hCG1742442 
LOC439957             0.118   PREDICTED: similar to hCG1742442 
LOC100292483          0.108   PREDICTED: similar to pre-B lymphocyte gene 2 [Homo...
LOC100290448          0.108   PREDICTED: hypothetical protein XP_002347494 
LOC100130811          0.104   PREDICTED: similar to hCG2038921 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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