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Search of human proteins with 239753561
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753561 PREDICTED: hypothetical protein XP_002345697 [Homo
sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753561 PREDICTED: hypothetical protein XP_002345697 [Homo ... 557 e-159
gi|239748101 PREDICTED: hypothetical protein [Homo sapiens] 557 e-159
gi|239741997 PREDICTED: hypothetical protein XP_002342369 [Homo ... 526 e-149
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] 35 0.068
gi|239757158 PREDICTED: hypothetical protein [Homo sapiens] 34 0.15
gi|239755454 PREDICTED: hypothetical protein [Homo sapiens] 34 0.15
gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo ... 34 0.15
gi|239746157 PREDICTED: hypothetical protein XP_002343679 [Homo ... 34 0.15
gi|41281612 zinc finger protein 828 [Homo sapiens] 33 0.34
gi|239757240 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|239756662 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|239753721 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo ... 32 0.76
gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo ... 32 0.76
gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo ... 32 0.76
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 31 0.99
gi|113416171 PREDICTED: hypothetical protein [Homo sapiens] 31 0.99
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 31 0.99
gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens] 31 0.99
gi|92859678 small nuclear RNA activating complex, polypeptide 4,... 31 0.99
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 31 1.3
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 31 1.3
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 31 1.3
gi|41054864 regulating synaptic membrane exocytosis 1 [Homo sapi... 31 1.3
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 31 1.3
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 30 1.7
gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo ... 30 1.7
gi|169210099 PREDICTED: hypothetical protein [Homo sapiens] 30 1.7
gi|153266901 gamma-glutamyltransferase 5 isoform a [Homo sapiens] 30 2.2
gi|153266885 gamma-glutamyltransferase 5 isoform b [Homo sapiens] 30 2.2
>gi|239753561 PREDICTED: hypothetical protein XP_002345697 [Homo
sapiens]
Length = 267
Score = 557 bits (1436), Expect = e-159
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG
Sbjct: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
Query: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPVFW 120
SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPVFW
Sbjct: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPVFW 120
Query: 121 VSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARG 180
VSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARG
Sbjct: 121 VSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARG 180
Query: 181 YSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSSA 240
YSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSSA
Sbjct: 181 YSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSSA 240
Query: 241 LPRLHNTPLALSVHRGRPAWDLEITRP 267
LPRLHNTPLALSVHRGRPAWDLEITRP
Sbjct: 241 LPRLHNTPLALSVHRGRPAWDLEITRP 267
>gi|239748101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 267
Score = 557 bits (1436), Expect = e-159
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG
Sbjct: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
Query: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPVFW 120
SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPVFW
Sbjct: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPVFW 120
Query: 121 VSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARG 180
VSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARG
Sbjct: 121 VSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARG 180
Query: 181 YSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSSA 240
YSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSSA
Sbjct: 181 YSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSSA 240
Query: 241 LPRLHNTPLALSVHRGRPAWDLEITRP 267
LPRLHNTPLALSVHRGRPAWDLEITRP
Sbjct: 241 LPRLHNTPLALSVHRGRPAWDLEITRP 267
>gi|239741997 PREDICTED: hypothetical protein XP_002342369 [Homo
sapiens]
Length = 268
Score = 526 bits (1354), Expect = e-149
Identities = 256/268 (95%), Positives = 257/268 (95%), Gaps = 1/268 (0%)
Query: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG
Sbjct: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
Query: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSR-GLHFLLSRIKSPRSSPGFRGPVF 119
SPADEPRDLPFGLGRSWLGVSNRSSPAAEP R + SRIKSPRSSPGFRGPVF
Sbjct: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVF 120
Query: 120 WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR 179
WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR
Sbjct: 121 WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR 180
Query: 180 GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS 239
GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS
Sbjct: 181 GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS 240
Query: 240 ALPRLHNTPLALSVHRGRPAWDLEITRP 267
ALPRLHNTPLALSVHRGRPAWDLEITRP
Sbjct: 241 ALPRLHNTPLALSVHRGRPAWDLEITRP 268
>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
Length = 681
Score = 35.0 bits (79), Expect = 0.068
Identities = 35/118 (29%), Positives = 42/118 (35%), Gaps = 11/118 (9%)
Query: 83 RSSPAAEPRERRSRGL---HFLLSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLLT 139
R + AE +RR L H + P P GP + A PGP
Sbjct: 383 RPNDGAEELQRRGALLVLNHGAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASA 442
Query: 140 ------QLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARGYSPGSGAGRPG 191
++T AQ G ED P S E GCR P P G +P GAG G
Sbjct: 443 RPSESKEMTGARLWAQDGSEDEPPKDSDGEDPETAAVGCRGPTP--GQAPAGGAGAEG 498
>gi|239757158 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 33.9 bits (76), Expect = 0.15
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 51 SILQRHT-TLGSPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPR 109
++LQ+H T G + PR P RS R+ A R R + G L SR+ SPR
Sbjct: 50 NLLQQHVDTGGLQSPPPRPSPALSARSSRRALART--ALPGRGRGAPGCAALPSRLPSPR 107
Query: 110 SSPGFRGPVFWVSERALATAGSWCPGPLL 138
P R P VS R TA W PGP L
Sbjct: 108 PRPSRRAPP-PVSRR---TARGWEPGPTL 132
>gi|239755454 PREDICTED: hypothetical protein [Homo sapiens]
Length = 305
Score = 33.9 bits (76), Expect = 0.15
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 22/123 (17%)
Query: 53 LQRHTTLGSPADEPR-DLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPR-- 109
L+R ++ SP + +P+ G W + R S A P E+ G+ + R+ P
Sbjct: 168 LERRASVASPGQKGECGVPWREGGVWRPLERRGS-VASPGEKGECGVPWREGRVWRPLER 226
Query: 110 ----SSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWR 165
+SPG +G W G + L + S A PG + + VRWR
Sbjct: 227 RASVASPGQKGEC----------GVPWREGAVWRPLDRRGSVASPGEK----GECGVRWR 272
Query: 166 EGR 168
EGR
Sbjct: 273 EGR 275
>gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo
sapiens]
Length = 150
Score = 33.9 bits (76), Expect = 0.15
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 51 SILQRHT-TLGSPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPR 109
++LQ+H T G + PR P RS R+ A R R + G L SR+ SPR
Sbjct: 50 NLLQQHVDTGGLQSPPPRPSPALSARSSRRALART--ALPGRGRGAPGCAALPSRLPSPR 107
Query: 110 SSPGFRGPVFWVSERALATAGSWCPGPLL 138
P R P VS R TA W PGP L
Sbjct: 108 PRPSRRAPP-PVSRR---TARGWEPGPTL 132
>gi|239746157 PREDICTED: hypothetical protein XP_002343679 [Homo
sapiens]
Length = 150
Score = 33.9 bits (76), Expect = 0.15
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 51 SILQRHT-TLGSPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPR 109
++LQ+H T G + PR P RS R+ A R R + G L SR+ SPR
Sbjct: 50 NLLQQHVDTGGLQSPPPRPSPALSARSSRRALART--ALPGRGRGAPGCAALPSRLPSPR 107
Query: 110 SSPGFRGPVFWVSERALATAGSWCPGPLL 138
P R P VS R TA W PGP L
Sbjct: 108 PRPSRRAPP-PVSRR---TARGWEPGPTL 132
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 32.7 bits (73), Expect = 0.34
Identities = 50/174 (28%), Positives = 58/174 (33%), Gaps = 34/174 (19%)
Query: 85 SPAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPVFWVSERALATA-----GSWCPGPLLT 139
SPAA P R+S R SP SP P VS A GSW PGP
Sbjct: 260 SPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGP--- 316
Query: 140 QLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARGYSPGSGAGRPGAPQCALVV 199
P PS S W+ + PA SPG P P ++
Sbjct: 317 -------PGSPRPWKSNPSASSGPWKPAK--------PAPSVSPG-----PWKPIPSVSP 356
Query: 200 YTLKPF-EFESACWCLSSPRPCKGTANPISQTANRGARKSSALPRLHNTPLALS 252
KP SA W SS P + P S + + S P L T LS
Sbjct: 357 GPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWK-----SGPPELRKTAPTLS 405
>gi|239757240 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 31.6 bits (70), Expect = 0.76
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 217 PRPCKGTANPISQTANRGARKSSALPRLHNTPLALS 252
P C G+ +P+S + R K+ +LPR+ N LA+S
Sbjct: 14 PSSCSGSRSPLSGSRRRTWLKAKSLPRMANWSLAMS 49
>gi|239756662 PREDICTED: hypothetical protein [Homo sapiens]
Length = 418
Score = 31.6 bits (70), Expect = 0.76
Identities = 28/99 (28%), Positives = 33/99 (33%), Gaps = 13/99 (13%)
Query: 170 RGCRAPFPARGYSPGSGAGRPGAPQCALVVYTLKPFE------FESACWCLSSPRPCKGT 223
RG +P A ++ G G APQC L + SP P GT
Sbjct: 2 RGGHSPAAAPAHTGGRRGGGAPAPQCVRSPAALSRRHQPGRLLLHVRTTSVCSPLPWTGT 61
Query: 224 ANPISQTANRGARKSSALPRLHNTPLALSVHRGRPAWDL 262
A G + LP L PL HRG W L
Sbjct: 62 AT-------EGQSVGTCLPGLFTRPLDRHRHRGSECWHL 93
Score = 30.8 bits (68), Expect = 1.3
Identities = 39/135 (28%), Positives = 43/135 (31%), Gaps = 37/135 (27%)
Query: 160 SPVRWREGRHRGCRAPFPARGY---SPGSGAGRPGAPQCALVVYTLKPFEFE-------- 208
SPV W G + G SPG P PQ V T P +F
Sbjct: 121 SPVPWTGTGTEGXECWHLSSGSVHPSPG-----PAPPQRVRSVGTCLPGQFTRPLDRHRH 175
Query: 209 --SACWCLSSP--RPCKGTANPI-----------------SQTANRGARKSSALPRLHNT 247
S CW LSS P G A P + TA G + LP L
Sbjct: 176 RGSECWHLSSGSVHPSPGPAPPQRVRVLAPVFRICSPVPWTGTATEGQSVGTCLPDLFTR 235
Query: 248 PLALSVHRGRPAWDL 262
PL HRG W L
Sbjct: 236 PLDRHRHRGSECWHL 250
>gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 342
Score = 31.6 bits (70), Expect = 0.76
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 122 SERALATAGSWCPGPLLTQLT---FQNSAAQP----GGEDLTPSQSPVRWREGRHRGCRA 174
SER A SW PGPL Q T + S QP G+ + + R GR RG +
Sbjct: 71 SERGRGPAASWAPGPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGGS 130
Query: 175 PFPARGYSPG 184
P G + G
Sbjct: 131 PAAREGDAAG 140
>gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo
sapiens]
Length = 342
Score = 31.6 bits (70), Expect = 0.76
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 122 SERALATAGSWCPGPLLTQLT---FQNSAAQP----GGEDLTPSQSPVRWREGRHRGCRA 174
SER A SW PGPL Q T + S QP G+ + + R GR RG +
Sbjct: 71 SERGRGPAASWAPGPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGGS 130
Query: 175 PFPARGYSPG 184
P G + G
Sbjct: 131 PAAREGDAAG 140
>gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo
sapiens]
Length = 389
Score = 31.6 bits (70), Expect = 0.76
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 22/123 (17%)
Query: 53 LQRHTTLGSPADEPR-DLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPR-- 109
L+R ++ SP ++ +P+ G W + R+S A P E+ G+ + + P
Sbjct: 252 LERRGSVASPGEKGECGVPWTEGGVWRPLERRAS-VASPGEKGECGVPWTEGGVWRPLER 310
Query: 110 ----SSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWR 165
+SPG +G W G + L + S A PG + + VRWR
Sbjct: 311 RASVASPGEKGEC----------GVPWREGGVWRPLDRRGSVASPGEK----GECGVRWR 356
Query: 166 EGR 168
EGR
Sbjct: 357 EGR 359
>gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo
sapiens]
Length = 342
Score = 31.6 bits (70), Expect = 0.76
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 122 SERALATAGSWCPGPLLTQLT---FQNSAAQP----GGEDLTPSQSPVRWREGRHRGCRA 174
SER A SW PGPL Q T + S QP G+ + + R GR RG +
Sbjct: 71 SERGRGPAASWAPGPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGGS 130
Query: 175 PFPARGYSPG 184
P G + G
Sbjct: 131 PAAREGDAAG 140
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 31.2 bits (69), Expect = 0.99
Identities = 45/168 (26%), Positives = 55/168 (32%), Gaps = 41/168 (24%)
Query: 29 RALGGKTQKIEKHNGNGHKAEDSILQRHTTLGSPADEPRDLPFGLGRSWLGVSNRSSPAA 88
RA G T + E G H +D + G+ A EP R W R P
Sbjct: 337 RAGGTWTSRFEAQRGCAH--QDGQRRTRDGAGNHASEP-------ARVWSPPPRRQRPRR 387
Query: 89 EPRERRSRGLHFLLSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAA 148
PR S + P+ P P + AG GP AA
Sbjct: 388 LPRA----------SLQEEPKRRPPCARP---------SGAGPAREGP----------AA 418
Query: 149 QPGGEDLTPSQSPVRWREGRHRGCRAPF---PARGYSPGSGAGRPGAP 193
PGG P P R+ G RAP + G+ GS AGR P
Sbjct: 419 WPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDP 466
>gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 31.2 bits (69), Expect = 0.99
Identities = 49/178 (27%), Positives = 61/178 (34%), Gaps = 37/178 (20%)
Query: 111 SPGFRGPVFWVSERALATAGS-----WCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWR 165
SPG RG + R GS +C G + T + A+ PG D T + R
Sbjct: 23 SPGRRGTAGNLPRRLPLAQGSPRCCRFCKGSVSTATVTSSGASAPGSADPTLGSTAARRA 82
Query: 166 EGR---HRGC---RAPFPAR----------GYSPGSGA------------GRPGAPQCAL 197
GC AP PAR + G A GR P+ A
Sbjct: 83 SAPWACPAGCCRANAPAPARNPRRKEPRRQSRATGKSARTRRACASPCRPGRHCGPETAR 142
Query: 198 VVYTLKPFEFESACWCLSSPRP--CKGTANPISQTANRGARKSSALPRLHNTPLALSV 253
L F LS+P P G A P R S++LP+ TP ALSV
Sbjct: 143 RPRPLAGTTFCGGARVLSNPPPSGSGGDARPSPLVPRRCRATSASLPQ--ETPFALSV 198
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 31.2 bits (69), Expect = 0.99
Identities = 45/168 (26%), Positives = 55/168 (32%), Gaps = 41/168 (24%)
Query: 29 RALGGKTQKIEKHNGNGHKAEDSILQRHTTLGSPADEPRDLPFGLGRSWLGVSNRSSPAA 88
RA G T + E G H +D + G+ A EP R W R P
Sbjct: 337 RAGGTWTSRFEAQRGCAH--QDGQRRTRDGAGNHASEP-------ARVWSPPPRRQRPRR 387
Query: 89 EPRERRSRGLHFLLSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAA 148
PR S + P+ P P + AG GP AA
Sbjct: 388 LPRA----------SLQEEPKRRPPCARP---------SGAGPAREGP----------AA 418
Query: 149 QPGGEDLTPSQSPVRWREGRHRGCRAPF---PARGYSPGSGAGRPGAP 193
PGG P P R+ G RAP + G+ GS AGR P
Sbjct: 419 WPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDP 466
>gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens]
Length = 1462
Score = 31.2 bits (69), Expect = 0.99
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 135 GPLLTQLTFQNSAAQPG--GEDLTPSQSPVRWREGRHRGCRAPFPARGYSPGSGAGRP 190
GP + FQ+ P GED P +P E GC + PA G GSG RP
Sbjct: 182 GPWAGEGVFQSDLLLPHIHGEDQEPPDTPGEAEEDDEEGCASTDPA-GADEGSGPDRP 238
>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
190kDa [Homo sapiens]
Length = 1469
Score = 31.2 bits (69), Expect = 0.99
Identities = 36/150 (24%), Positives = 51/150 (34%), Gaps = 22/150 (14%)
Query: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFL---------------LSRI 105
+PA P + S LG S +PAA ++ FL L+ I
Sbjct: 1006 APALGPGQISVSCPESGLGQSQ--APAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHI 1063
Query: 106 KSPRSSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWR 165
P + PV WV TA P P+ ++ A PG L + P
Sbjct: 1064 GGPHVATSVPLPVTWV-----LTAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTE 1118
Query: 166 EGRHRGCRAPFPARGYSPGSGAGRPGAPQC 195
+G RAP + + P + R P C
Sbjct: 1119 TRAAQGPRAPALSSSWQPPANMNREPEPSC 1148
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 30.8 bits (68), Expect = 1.3
Identities = 32/110 (29%), Positives = 39/110 (35%), Gaps = 15/110 (13%)
Query: 86 PAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPV------FWVSERALATAG-SWCPGPLL 138
P + P+ R R L SR+ S P P F RA A G W P P
Sbjct: 157 PPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLP-PCR 215
Query: 139 TQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARGYSPGSGAG 188
+L Q G P P R GR RG P + G + G+G
Sbjct: 216 LRL-------QDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSG 258
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 30.8 bits (68), Expect = 1.3
Identities = 32/110 (29%), Positives = 39/110 (35%), Gaps = 15/110 (13%)
Query: 86 PAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPV------FWVSERALATAG-SWCPGPLL 138
P + P+ R R L SR+ S P P F RA A G W P P
Sbjct: 157 PPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLP-PCR 215
Query: 139 TQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARGYSPGSGAG 188
+L Q G P P R GR RG P + G + G+G
Sbjct: 216 LRL-------QDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSG 258
>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
Length = 321
Score = 30.8 bits (68), Expect = 1.3
Identities = 32/110 (29%), Positives = 39/110 (35%), Gaps = 15/110 (13%)
Query: 86 PAAEPRERRSRGLHFLLSRIKSPRSSPGFRGPV------FWVSERALATAG-SWCPGPLL 138
P + P+ R R L SR+ S P P F RA A G W P P
Sbjct: 157 PPSSPKARMERASRKLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLP-PCR 215
Query: 139 TQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARGYSPGSGAG 188
+L Q G P P R GR RG P + G + G+G
Sbjct: 216 LRL-------QDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTGGSG 258
>gi|41054864 regulating synaptic membrane exocytosis 1 [Homo sapiens]
Length = 1692
Score = 30.8 bits (68), Expect = 1.3
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 17/129 (13%)
Query: 40 KHNGNGHKAEDSILQRHTTLGSPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLH 99
+++ + K+E S +Q+ T G+ +D R LP L R ++P A + RG H
Sbjct: 1158 ENDRHSRKSERSSIQKQTRKGTASDAERVLPTCLSRR-----GHAAPRATDQPV-IRGKH 1211
Query: 100 FLLSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQ 159
SR S S L GS P PLLT++ Q S Q P+
Sbjct: 1212 PARSRSSEHSSIRTL------CSMHHLVPGGSAPPSPLLTRMHRQRSPTQS-----PPAD 1260
Query: 160 SPVRWREGR 168
+ R GR
Sbjct: 1261 TSFSSRRGR 1269
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 30.8 bits (68), Expect = 1.3
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 55 RHTTLGSPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPRSSPGF 114
R ++G+ PR L G GR G + PA E S G S + P+S+
Sbjct: 844 RSNSIGARHSTPRPLDAGRGRRLGGPRD---PAPEKSRASSSGGSGGGSGGRVPKSAS-- 898
Query: 115 RGPVFWVSERALA-TAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSP 161
VS +L TA GPL++ L+ ++ ++ P D +PS+ P
Sbjct: 899 ------VSALSLIITADDGSGGPLMSPLSPRSLSSNPSSRDSSPSRDP 940
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 30.4 bits (67), Expect = 1.7
Identities = 43/145 (29%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 54 QRHTTLGSPADEP-RDLPFGL-GRSWLGVSNRSSPAAEPRERRSRGLHFLLSRIKSPRSS 111
Q H G P P R +G R+ R+ PA P RG R +P ++
Sbjct: 66 QEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAPGRGRAAATRRSPAPGTA 125
Query: 112 PGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQP-GGEDLTPSQSPVRWREGRHR 170
RG V ATA S T+ P GG L +R R G
Sbjct: 126 ---RGSPAGVERAGGATAASSAG----TRSVPARRLPPPCGGTSLGAGSRALR-RPGSAA 177
Query: 171 GCRAPFPARGYS--PGSGAGRPGAP 193
R+P +R ++ PG GA RPGAP
Sbjct: 178 LPRSPSSSRRWAAMPGPGAPRPGAP 202
>gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo
sapiens]
Length = 177
Score = 30.4 bits (67), Expect = 1.7
Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 127 ATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARGYSPG-S 185
A +GSW + + S G L+ +P G H CR R PG S
Sbjct: 27 AQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCR-----RAVRPGLS 81
Query: 186 GAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSSALP 242
AG+ AP+ A +Y+ S SSP K + S + A SS P
Sbjct: 82 VAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASSTTP 138
>gi|169210099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 413
Score = 30.4 bits (67), Expect = 1.7
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 8/94 (8%)
Query: 170 RGCRAPFPARGYSPGSGAGRPGAPQCALVVYTL-KPFEFESACWCLSSPRPCKGTANPIS 228
RG +P A ++ G G APQC L + + + SP P GTA
Sbjct: 2 RGGHSPAAAPAHTGGRRGGGAPAPQCVRSPAALSRRHQPGRLLLHVCSPVPWTGTAT--- 58
Query: 229 QTANRGARKSSALPRLHNTPLALSVHRGRPAWDL 262
G + LP PL HRG W L
Sbjct: 59 ----EGQSVGTCLPGQFTRPLDRHRHRGSECWHL 88
Score = 28.1 bits (61), Expect = 8.4
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Query: 211 CWCLSSP--RPCKGTANPISQTANRGARKSSALPRLHNTPLALSVHRGRPAWDL 262
CW LSS P G A P R + LP L PL HRG W L
Sbjct: 130 CWHLSSGSVHPSPGPAPP-----QRVRSVGTCLPDLFTRPLDRHRHRGSECWHL 178
Score = 28.1 bits (61), Expect = 8.4
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 19/73 (26%)
Query: 209 SACWCLSSP--RPCKGTANPI-----------------SQTANRGARKSSALPRLHNTPL 249
S CW LSS P G A P + TA G + LP L PL
Sbjct: 173 SECWHLSSGSVHPSPGPAPPQRVRVLAPVFRICSPVPWTGTATEGQSVGTCLPDLFTRPL 232
Query: 250 ALSVHRGRPAWDL 262
HRG W L
Sbjct: 233 DRHRHRGSECWHL 245
>gi|153266901 gamma-glutamyltransferase 5 isoform a [Homo sapiens]
Length = 587
Score = 30.0 bits (66), Expect = 2.2
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 12 TSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLGSPADE-PRDLP 70
TS+++P+ + L +F T K+E N A +++ H S D+ + LP
Sbjct: 78 TSVVNPQSMGLGGGVIFTIYNVTTGKVEVIN-----ARETVPASHAP--SLLDQCAQALP 130
Query: 71 FGLGRSWLGVSNRSSPAAEPRERRSR 96
G G W+GV AE R R
Sbjct: 131 LGTGAQWIGVPGELRGYAEAHRRHGR 156
>gi|153266885 gamma-glutamyltransferase 5 isoform b [Homo sapiens]
Length = 586
Score = 30.0 bits (66), Expect = 2.2
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 12 TSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLGSPADE-PRDLP 70
TS+++P+ + L +F T K+E N A +++ H S D+ + LP
Sbjct: 78 TSVVNPQSMGLGGGVIFTIYNVTTGKVEVIN-----ARETVPASHAP--SLLDQCAQALP 130
Query: 71 FGLGRSWLGVSNRSSPAAEPRERRSR 96
G G W+GV AE R R
Sbjct: 131 LGTGAQWIGVPGELRGYAEAHRRHGR 156
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,124,839
Number of Sequences: 37866
Number of extensions: 764311
Number of successful extensions: 2243
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 2213
Number of HSP's gapped (non-prelim): 88
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.