BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239752897 PREDICTED: similar to phosphodiesterase 4D interacting protein [Homo sapiens] (259 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239752897 PREDICTED: similar to phosphodiesterase 4D interact... 507 e-144 gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ... 393 e-110 gi|239747450 PREDICTED: similar to phosphodiesterase 4D interact... 381 e-106 gi|58535453 CDK5 regulatory subunit associated protein 2 isoform... 77 1e-14 gi|58535451 CDK5 regulatory subunit associated protein 2 isoform... 77 1e-14 gi|221218991 neuroblastoma breakpoint family, member 4 [Homo sap... 38 0.008 gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2... 37 0.017 gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1... 37 0.017 gi|4758648 kinesin family member 5B [Homo sapiens] 34 0.15 gi|60498973 myelin transcription factor 1-like [Homo sapiens] 33 0.19 gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 33 0.19 gi|238859651 pleckstrin homology domain containing family A memb... 32 0.42 gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulat... 31 0.94 gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulat... 31 0.94 gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulat... 31 0.94 gi|37574601 zinc finger protein 232 [Homo sapiens] 31 0.94 gi|238859653 pleckstrin homology domain containing family A memb... 30 1.6 gi|70166832 glutamate receptor, ionotropic, N-methyl D-aspartate... 30 1.6 gi|197313748 SET domain containing 2 [Homo sapiens] 30 1.6 gi|9945439 septin 5 [Homo sapiens] 30 1.6 gi|68299759 ecotropic viral integration site 5 [Homo sapiens] 30 2.1 gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 30 2.1 gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 30 2.1 gi|4758448 guanine nucleotide binding protein gamma 11 precursor... 30 2.1 gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens] 30 2.7 gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens] 30 2.7 gi|91208420 bassoon protein [Homo sapiens] 30 2.7 gi|153792110 HEG homolog 1 [Homo sapiens] 30 2.7 gi|171184451 centrosome-associated protein 350 [Homo sapiens] 30 2.7 gi|222537750 ankyrin repeat domain 30B [Homo sapiens] 29 3.6 >gi|239752897 PREDICTED: similar to phosphodiesterase 4D interacting protein [Homo sapiens] Length = 259 Score = 507 bits (1306), Expect = e-144 Identities = 259/259 (100%), Positives = 259/259 (100%) Query: 1 MFLPLRKQGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDT 60 MFLPLRKQGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDT Sbjct: 1 MFLPLRKQGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDT 60 Query: 61 SPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACS 120 SPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACS Sbjct: 61 SPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACS 120 Query: 121 FPGLEAQGTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGE 180 FPGLEAQGTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGE Sbjct: 121 FPGLEAQGTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGE 180 Query: 181 STERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTL 240 STERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTL Sbjct: 181 STERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTL 240 Query: 241 AFQEPCKKRSHQKSLYRYT 259 AFQEPCKKRSHQKSLYRYT Sbjct: 241 AFQEPCKKRSHQKSLYRYT 259 >gi|157311604 phosphodiesterase 4D interacting protein isoform 1 [Homo sapiens] Length = 2346 Score = 393 bits (1009), Expect = e-110 Identities = 201/212 (94%), Positives = 203/212 (95%) Query: 13 VLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAPPKLEG 72 +L DSAVSPPVRDVGMNSPALV PSSASSTPGSET IINR +GLGLDTSPVMK PPKLEG Sbjct: 2106 LLQDSAVSPPVRDVGMNSPALVFPSSASSTPGSETPIINRANGLGLDTSPVMKTPPKLEG 2165 Query: 73 DATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLEAQGTGVL 132 DATDGSFANKHGRHVIGHIDDYSALRQQI EGKLLVKKIVSLVRSACSFPGLEAQGT VL Sbjct: 2166 DATDGSFANKHGRHVIGHIDDYSALRQQIAEGKLLVKKIVSLVRSACSFPGLEAQGTEVL 2225 Query: 133 GSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGESTERELLELRTK 192 GSKGIHELRSSTSALHHALEESASLLTMFWR ALPSTHIPVLPGKVGESTERELLELRTK Sbjct: 2226 GSKGIHELRSSTSALHHALEESASLLTMFWRAALPSTHIPVLPGKVGESTERELLELRTK 2285 Query: 193 VSKQERLLQSTAEHLKNANQQKESMEQFIVSQ 224 VSKQERLLQST EHLKNANQQKESMEQFIVSQ Sbjct: 2286 VSKQERLLQSTTEHLKNANQQKESMEQFIVSQ 2317 >gi|239747450 PREDICTED: similar to phosphodiesterase 4D interacting protein [Homo sapiens] Length = 236 Score = 381 bits (978), Expect = e-106 Identities = 197/214 (92%), Positives = 201/214 (93%) Query: 16 DSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAPPKLEGDAT 75 DSAVSPPVRDVGMNS ALVLPSSASST GSETAIINRT+GLGLDTSPVMK PPKLEGDAT Sbjct: 6 DSAVSPPVRDVGMNSQALVLPSSASSTSGSETAIINRTNGLGLDTSPVMKTPPKLEGDAT 65 Query: 76 DGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLEAQGTGVLGSK 135 DGSFA+KHGRHVIGHIDDYSALRQQI EGKLLVKKIVSLVRSACSFPGLEAQGT VLGSK Sbjct: 66 DGSFASKHGRHVIGHIDDYSALRQQIAEGKLLVKKIVSLVRSACSFPGLEAQGTEVLGSK 125 Query: 136 GIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGESTERELLELRTKVSK 195 GIHELRSSTSALHHALEESASLLTMFWR ALPSTHIP LPGKV ESTERELLELRTKVSK Sbjct: 126 GIHELRSSTSALHHALEESASLLTMFWRAALPSTHIPALPGKVRESTERELLELRTKVSK 185 Query: 196 QERLLQSTAEHLKNANQQKESMEQFIVSQREIPK 229 QE LLQSTAEHLK NQQKESMEQFI+SQR P+ Sbjct: 186 QEWLLQSTAEHLKIDNQQKESMEQFIISQRRFPE 219 >gi|58535453 CDK5 regulatory subunit associated protein 2 isoform b [Homo sapiens] Length = 1814 Score = 77.0 bits (188), Expect = 1e-14 Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 29 NSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAPPKLEGDATDGS-FANKHGRHV 87 +S V P S S TP N T L D+ + P + T +A+K+GRHV Sbjct: 1592 DSSQAVTPKSVSETPPLSG---NDTDSLSCDSGSSATSTPCVSRLVTGHHLWASKNGRHV 1648 Query: 88 IGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLEAQGTGVLGSKGIH-----ELRS 142 +G I+DY AL +QI +G+ L+ ++ + A S E LG+KG H + S Sbjct: 1649 LGLIEDYEALLKQISQGQRLLAEMDIQTQEAPSSTSQE------LGTKGPHPAPLSKFVS 1702 Query: 143 STSALHHALEESASLLTMFWRVALPST-HIPVLPGKVGESTERELLELRTKVSKQERLLQ 201 S S LEE+ L + WRV+LP P+ ++GE + E+ +L K+ +QE+ LQ Sbjct: 1703 SVSTAKLTLEEAYRRLKLLWRVSLPEDGQCPLHCEQIGE-MKAEVTKLHKKLFEQEKKLQ 1761 Query: 202 STAEHLK-NANQQKESMEQFIVSQREIPK 229 +T + L+ + Q+K +Q +V+ + + K Sbjct: 1762 NTMKLLQLSKRQEKVIFDQLVVTHKILRK 1790 >gi|58535451 CDK5 regulatory subunit associated protein 2 isoform a [Homo sapiens] Length = 1893 Score = 77.0 bits (188), Expect = 1e-14 Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%) Query: 29 NSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAPPKLEGDATDGS-FANKHGRHV 87 +S V P S S TP N T L D+ + P + T +A+K+GRHV Sbjct: 1671 DSSQAVTPKSVSETPPLSG---NDTDSLSCDSGSSATSTPCVSRLVTGHHLWASKNGRHV 1727 Query: 88 IGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLEAQGTGVLGSKGIH-----ELRS 142 +G I+DY AL +QI +G+ L+ ++ + A S E LG+KG H + S Sbjct: 1728 LGLIEDYEALLKQISQGQRLLAEMDIQTQEAPSSTSQE------LGTKGPHPAPLSKFVS 1781 Query: 143 STSALHHALEESASLLTMFWRVALPST-HIPVLPGKVGESTERELLELRTKVSKQERLLQ 201 S S LEE+ L + WRV+LP P+ ++GE + E+ +L K+ +QE+ LQ Sbjct: 1782 SVSTAKLTLEEAYRRLKLLWRVSLPEDGQCPLHCEQIGE-MKAEVTKLHKKLFEQEKKLQ 1840 Query: 202 STAEHLK-NANQQKESMEQFIVSQREIPK 229 +T + L+ + Q+K +Q +V+ + + K Sbjct: 1841 NTMKLLQLSKRQEKVIFDQLVVTHKILRK 1869 >gi|221218991 neuroblastoma breakpoint family, member 4 [Homo sapiens] Length = 638 Score = 38.1 bits (87), Expect = 0.008 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 56 LGLDTSPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLV 115 L L+ S MK PP+LE DA +GS +N GR V G I L + + +L K Sbjct: 555 LVLEPSLGMKNPPQLEDDALEGSASNTQGRQVTGRIRASLVLILKTIRRRLPFSK----W 610 Query: 116 RSACSFPGLEAQGTGVLGSKG 136 R A F G A+ + + G Sbjct: 611 RLAFRFAGPHAESAEIPNTAG 631 >gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2 [Homo sapiens] Length = 638 Score = 37.0 bits (84), Expect = 0.017 Identities = 19/36 (52%), Positives = 23/36 (63%) Query: 56 LGLDTSPVMKAPPKLEGDATDGSFANKHGRHVIGHI 91 L L+ S MK PP+LE DA +GS +N GR V G I Sbjct: 555 LVLEPSLGMKNPPQLEDDALEGSASNTQGRQVTGRI 590 >gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1 [Homo sapiens] Length = 667 Score = 37.0 bits (84), Expect = 0.017 Identities = 19/36 (52%), Positives = 23/36 (63%) Query: 56 LGLDTSPVMKAPPKLEGDATDGSFANKHGRHVIGHI 91 L L+ S MK PP+LE DA +GS +N GR V G I Sbjct: 584 LVLEPSLGMKNPPQLEDDALEGSASNTQGRQVTGRI 619 >gi|4758648 kinesin family member 5B [Homo sapiens] Length = 963 Score = 33.9 bits (76), Expect = 0.15 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 9/65 (13%) Query: 180 ESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVT 239 E E+EL + ++S+ E ++S E+L+N Q+K +E+ + A+ LV Sbjct: 623 EENEKELAACQLRISQHEAKIKSLTEYLQNVEQKKRQLEESV---------DALSEELVQ 673 Query: 240 LAFQE 244 L QE Sbjct: 674 LRAQE 678 Score = 28.9 bits (63), Expect = 4.7 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 7/50 (14%) Query: 180 ESTERELLELRTKVSKQERLLQSTAEHL---KNANQQKESMEQFIVSQRE 226 ++ EL++LR QE++ + EHL + AN+ K+++EQ I S RE Sbjct: 665 DALSEELVQLRA----QEKVHEMEKEHLNKVQTANEVKQAVEQQIQSHRE 710 >gi|60498973 myelin transcription factor 1-like [Homo sapiens] Length = 1184 Score = 33.5 bits (75), Expect = 0.19 Identities = 44/174 (25%), Positives = 69/174 (39%), Gaps = 19/174 (10%) Query: 59 DTSPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQ--IVEGKLLVKKIVSLVR 116 D P+ P +G G K+ H +A RQ+ + G K V Sbjct: 946 DQEPIRCPVPGCDGQ---GHITGKYASHRSASGCPLAAKRQKDGYLNGSQFSWKSVKTEG 1002 Query: 117 SACSFPGLEAQGTGVLGSKGIHELRS----STSALHHALEESASLLTMFWRVALP---ST 169 +C PG + G V GS H S +TSA+ A +LT+ R + Sbjct: 1003 MSCPTPGCDGSGH-VSGSFLTHRSLSGCPRATSAMKKAKLSGEQMLTIKQRASNGIENDE 1061 Query: 170 HIPVLPGKVGE------STERELLELRTKVSKQERLLQSTAEHLKNANQQKESM 217 I L ++ E E ++++LRT+++ E L++ E K QQ ES+ Sbjct: 1062 EIKQLDEEIKELNESNSQMEADMIKLRTQITTMESNLKTIEEENKVIEQQNESL 1115 >gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] Length = 1417 Score = 33.5 bits (75), Expect = 0.19 Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 8/89 (8%) Query: 138 HELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGESTERELLELRTKVSKQE 197 H L + ++H L +S + ++M + +P+L E +++ L +VS Q+ Sbjct: 253 HSLMTKFESIHFELTQSRAKVSMLESAQQQAASVPIL--------EEQIINLEAEVSAQD 304 Query: 198 RLLQSTAEHLKNANQQKESMEQFIVSQRE 226 ++L+ L+ + + EQ + +E Sbjct: 305 KVLREAENKLEQSQKMVIEKEQSLQESKE 333 >gi|238859651 pleckstrin homology domain containing family A member 4 isoform 1 [Homo sapiens] Length = 779 Score = 32.3 bits (72), Expect = 0.42 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 173 VLPGKVGESTERELLE---LRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQRE 226 +LPG EST + LE L TK+ Q+RLL+ E + ++KE +E + R+ Sbjct: 348 LLPGPPLESTFHQSLETDTLLTKLCGQDRLLRRLQEEIDQKQEEKEQLEAALELTRQ 404 >gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B isoform a [Homo sapiens] Length = 629 Score = 31.2 bits (69), Expect = 0.94 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 19/69 (27%) Query: 21 PPVRDVGMNSPALV-------------------LPSSASSTPGSETAIINRTHGLGLDTS 61 PP+ D MNSP + P+SASS PG+ + + LG S Sbjct: 495 PPITDCEMNSPQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGRPPS 554 Query: 62 PVMKAPPKL 70 P PP+L Sbjct: 555 PTSPPPPEL 563 >gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B isoform c [Homo sapiens] Length = 601 Score = 31.2 bits (69), Expect = 0.94 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 19/69 (27%) Query: 21 PPVRDVGMNSPALV-------------------LPSSASSTPGSETAIINRTHGLGLDTS 61 PP+ D MNSP + P+SASS PG+ + + LG S Sbjct: 467 PPITDCEMNSPQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGRPPS 526 Query: 62 PVMKAPPKL 70 P PP+L Sbjct: 527 PTSPPPPEL 535 >gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B isoform b [Homo sapiens] Length = 589 Score = 31.2 bits (69), Expect = 0.94 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 19/69 (27%) Query: 21 PPVRDVGMNSPALV-------------------LPSSASSTPGSETAIINRTHGLGLDTS 61 PP+ D MNSP + P+SASS PG+ + + LG S Sbjct: 455 PPITDCEMNSPQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGRPPS 514 Query: 62 PVMKAPPKL 70 P PP+L Sbjct: 515 PTSPPPPEL 523 >gi|37574601 zinc finger protein 232 [Homo sapiens] Length = 444 Score = 31.2 bits (69), Expect = 0.94 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 8/51 (15%) Query: 180 ESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKG 230 E+T LEL+ + K ERL S A Q+ES Q +V +EIP G Sbjct: 257 EATSEGTLELQQRNPKAERLRWSPA--------QEESFRQMVVIHKEIPTG 299 >gi|238859653 pleckstrin homology domain containing family A member 4 isoform 2 [Homo sapiens] Length = 583 Score = 30.4 bits (67), Expect = 1.6 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Query: 175 PGKVGESTERELLE---LRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQRE 226 PG EST + LE L TK+ Q+RLL+ E + ++KE +E + R+ Sbjct: 325 PGPPLESTFHQSLETDTLLTKLCGQDRLLRRLQEEIDQKQEEKEQLEAALELTRQ 379 >gi|70166832 glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A isoform 2 [Homo sapiens] Length = 211 Score = 30.4 bits (67), Expect = 1.6 Identities = 13/37 (35%), Positives = 25/37 (67%) Query: 183 ERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQ 219 +R L+ELR + +QERLL++ + + A+Q ++ E+ Sbjct: 18 QRSLVELREMLKRQERLLRNELQRITIADQGEQQSEE 54 >gi|197313748 SET domain containing 2 [Homo sapiens] Length = 2564 Score = 30.4 bits (67), Expect = 1.6 Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 18/153 (11%) Query: 21 PPVRDVGMNSPALVL-PSSASSTPGSETAIINRTHGLGLDTS-------PVMKAPPKLEG 72 PP + ++SPA V P + TP T ++ L +D + P++ P LE Sbjct: 195 PPAQATTLSSPAPVTEPVALPHTP--ITVLMAAPVPLPVDVAVRSLKEPPIIIVPESLEA 252 Query: 73 DATDGSFAN---KHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLE---A 126 D + +N +H ++ D S+ ++ GK S + +C G + + Sbjct: 253 DTKQDTISNSLEEHVTQILNEQADISSKKEDSHIGKDEEIPDSSKISLSCKKTGSKKKSS 312 Query: 127 QGTGV-LGSKGIHE-LRSSTSALHHALEESASL 157 Q G+ LGS+ + +R+S+S H L+ SAS+ Sbjct: 313 QSEGIFLGSESDEDSVRTSSSQRSHDLKFSASI 345 >gi|9945439 septin 5 [Homo sapiens] Length = 369 Score = 30.4 bits (67), Expect = 1.6 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 27/132 (20%) Query: 100 QIVEGKLLVKKIVSLVRSA-CSFPGLEAQGTGVLGSKGIHELRSSTSALH------HALE 152 Q V G+L IV + A C F L +L +H+L+ T +H H ++ Sbjct: 258 QRVRGRLYPWGIVEVENQAHCDFVKLR----NMLIRTHMHDLKDVTCDVHYENYRAHCIQ 313 Query: 153 ESASLLTMFWRVALPSTHIPVLPGKVGESTERELLELRTKVSKQERLLQSTAEHLKNANQ 212 + S LT R+ P IP+LP L T ++ E+L++ E L+ + Sbjct: 314 QMTSKLTQDSRMESP---IPILP-------------LPTPDAETEKLIRMKDEELRRMQE 357 Query: 213 QKESMEQFIVSQ 224 + M+Q + Q Sbjct: 358 MLQRMKQQMQDQ 369 >gi|68299759 ecotropic viral integration site 5 [Homo sapiens] Length = 810 Score = 30.0 bits (66), Expect = 2.1 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 13/107 (12%) Query: 128 GTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHI-----------PVLPG 176 G V K +L S+ S + + + + S + +VA PST + P L Sbjct: 15 GKQVATDKVAEKLSSTLSWVKNTVSHTVSQMAS--QVASPSTSLHTTSSSTTLSTPALSP 72 Query: 177 KVGESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVS 223 + LEL K+ +Q RLL++ ++ L++ N + + +VS Sbjct: 73 SSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVS 119 >gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] Length = 3907 Score = 30.0 bits (66), Expect = 2.1 Identities = 17/74 (22%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 183 ERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTLAF 242 E++ LEL+ K++ ++LL E + NQ+ ++M+ + + ++ + S+ + + Sbjct: 342 EKKTLELKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQL-MGT 400 Query: 243 QEPCKKRSHQKSLY 256 E +KR+H+ S + Sbjct: 401 VEELQKRNHKDSQF 414 >gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] Length = 3899 Score = 30.0 bits (66), Expect = 2.1 Identities = 17/74 (22%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 183 ERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTLAF 242 E++ LEL+ K++ ++LL E + NQ+ ++M+ + + ++ + S+ + + Sbjct: 342 EKKTLELKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQL-MGT 400 Query: 243 QEPCKKRSHQKSLY 256 E +KR+H+ S + Sbjct: 401 VEELQKRNHKDSQF 414 >gi|4758448 guanine nucleotide binding protein gamma 11 precursor [Homo sapiens] Length = 73 Score = 30.0 bits (66), Expect = 2.1 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 7/75 (9%) Query: 166 LPSTHIPVLPGKVGESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFI--VS 223 +P+ HI LP K E + E+ +LR +V Q + + +E +KN +++ + + + Sbjct: 1 MPALHIEDLPEK--EKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIP 58 Query: 224 QREIP---KGSAVYS 235 + + P KGS V S Sbjct: 59 EDKNPFKEKGSCVIS 73 >gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens] Length = 587 Score = 29.6 bits (65), Expect = 2.7 Identities = 21/71 (29%), Positives = 30/71 (42%) Query: 8 QGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAP 67 QGS E D+ SPP + S SSTP + + + T G +++ V +P Sbjct: 411 QGSTEATLDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEESTTVHSSP 470 Query: 68 PKLEGDATDGS 78 E A GS Sbjct: 471 GSTETTALPGS 481 >gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens] Length = 456 Score = 29.6 bits (65), Expect = 2.7 Identities = 21/71 (29%), Positives = 30/71 (42%) Query: 8 QGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAP 67 QGS E D+ SPP + S SSTP + + + T G +++ V +P Sbjct: 305 QGSTEATLDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEESTTVHSSP 364 Query: 68 PKLEGDATDGS 78 E A GS Sbjct: 365 GSTETTALPGS 375 >gi|91208420 bassoon protein [Homo sapiens] Length = 3926 Score = 29.6 bits (65), Expect = 2.7 Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 5/121 (4%) Query: 128 GTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGESTERELL 187 GT + E S+ + LEE+ R A +H P+LP S E EL Sbjct: 993 GTSPTSLSSLEEDSDSSPSRRQRLEEAKQQ-----RKARHRSHGPLLPTIEDSSEEEELR 1047 Query: 188 ELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTLAFQEPCK 247 E + +QE++ + + +++ ++ ++ + +QR + S+L + P + Sbjct: 1048 EEEELLREQEKMREVEQQRIRSTARKTRRDKEELRAQRRRERSKTPPSNLSPIEDASPTE 1107 Query: 248 K 248 + Sbjct: 1108 E 1108 >gi|153792110 HEG homolog 1 [Homo sapiens] Length = 1381 Score = 29.6 bits (65), Expect = 2.7 Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 18/173 (10%) Query: 10 SGEVLDDSAVSPPVRDVGMNSPALV-LPSSASSTPGSETAIINRTHGLGLDTSP---VMK 65 S +V SA P G+N+ L S + GS TA+ +R++ TS + Sbjct: 466 SADVTGSSASYPE----GVNASVLTQFSDSTVQSGGSHTALGDRSYSESSSTSSSESLNS 521 Query: 66 APPKLEGDATDGSFANKHGRHVIGHID----DYSALRQQIVEGKLLVKKIVSLVRSACSF 121 + P+ E S+ G + D++ L +G+ + ++S+ ++ S Sbjct: 522 SAPRGERSIAGISYGQVRGTAIEQRTSSDHTDHTYLSSTFTKGE---RALLSITDNSSSS 578 Query: 122 PGLEAQGTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVL 174 +E+ + + S H S S+ HA E +++ + A PST PVL Sbjct: 579 DIVESSTSYIKISNSSH---SEYSSFFHAQTERSNISSYDGEYAQPSTESPVL 628 >gi|171184451 centrosome-associated protein 350 [Homo sapiens] Length = 3117 Score = 29.6 bits (65), Expect = 2.7 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 8/100 (8%) Query: 136 GIHELRSSTSALHHALEESASLLTMFWRVA------LPSTHIPVLPGKVGESTERELLEL 189 G+H ++ + +A+EES L+ RV S + + + ER+L L Sbjct: 1324 GLHHRMAAELSYLNAIEESVRQLSDVERVRGISLAQQESVSLAQIIKAQQQRHERDLALL 1383 Query: 190 RTKVSKQERLLQSTAEHLKN--ANQQKESMEQFIVSQREI 227 + K ++ Q E +N A ES++Q + SQRE+ Sbjct: 1384 KLKAEQEALESQRQLEETRNKAAQVHAESLQQVVQSQREV 1423 >gi|222537750 ankyrin repeat domain 30B [Homo sapiens] Length = 1392 Score = 29.3 bits (64), Expect = 3.6 Identities = 12/42 (28%), Positives = 25/42 (59%) Query: 178 VGESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQ 219 V E +R+ E + ++ K E + Q+ +++ +Q+ES+EQ Sbjct: 1260 VSEHAQRDRCETQCQMKKAEHMYQNEQDNVDKHTEQQESLEQ 1301 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.313 0.129 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,951,740 Number of Sequences: 37866 Number of extensions: 431747 Number of successful extensions: 1608 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1572 Number of HSP's gapped (non-prelim): 63 length of query: 259 length of database: 18,247,518 effective HSP length: 100 effective length of query: 159 effective length of database: 14,460,918 effective search space: 2299285962 effective search space used: 2299285962 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.