Guide to the Human Genome
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Search of human proteins with 239752897

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239752897 PREDICTED: similar to phosphodiesterase 4D
interacting protein [Homo sapiens]
         (259 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752897 PREDICTED: similar to phosphodiesterase 4D interact...   507   e-144
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ...   393   e-110
gi|239747450 PREDICTED: similar to phosphodiesterase 4D interact...   381   e-106
gi|58535453 CDK5 regulatory subunit associated protein 2 isoform...    77   1e-14
gi|58535451 CDK5 regulatory subunit associated protein 2 isoform...    77   1e-14
gi|221218991 neuroblastoma breakpoint family, member 4 [Homo sap...    38   0.008
gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2...    37   0.017
gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1...    37   0.017
gi|4758648 kinesin family member 5B [Homo sapiens]                     34   0.15 
gi|60498973 myelin transcription factor 1-like [Homo sapiens]          33   0.19 
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]                   33   0.19 
gi|238859651 pleckstrin homology domain containing family A memb...    32   0.42 
gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulat...    31   0.94 
gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulat...    31   0.94 
gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulat...    31   0.94 
gi|37574601 zinc finger protein 232 [Homo sapiens]                     31   0.94 
gi|238859653 pleckstrin homology domain containing family A memb...    30   1.6  
gi|70166832 glutamate receptor, ionotropic, N-methyl D-aspartate...    30   1.6  
gi|197313748 SET domain containing 2 [Homo sapiens]                    30   1.6  
gi|9945439 septin 5 [Homo sapiens]                                     30   1.6  
gi|68299759 ecotropic viral integration site 5 [Homo sapiens]          30   2.1  
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         30   2.1  
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         30   2.1  
gi|4758448 guanine nucleotide binding protein gamma 11 precursor...    30   2.1  
gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens]             30   2.7  
gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]             30   2.7  
gi|91208420 bassoon protein [Homo sapiens]                             30   2.7  
gi|153792110 HEG homolog 1 [Homo sapiens]                              30   2.7  
gi|171184451 centrosome-associated protein 350 [Homo sapiens]          30   2.7  
gi|222537750 ankyrin repeat domain 30B [Homo sapiens]                  29   3.6  

>gi|239752897 PREDICTED: similar to phosphodiesterase 4D interacting
           protein [Homo sapiens]
          Length = 259

 Score =  507 bits (1306), Expect = e-144
 Identities = 259/259 (100%), Positives = 259/259 (100%)

Query: 1   MFLPLRKQGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDT 60
           MFLPLRKQGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDT
Sbjct: 1   MFLPLRKQGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDT 60

Query: 61  SPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACS 120
           SPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACS
Sbjct: 61  SPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACS 120

Query: 121 FPGLEAQGTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGE 180
           FPGLEAQGTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGE
Sbjct: 121 FPGLEAQGTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGE 180

Query: 181 STERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTL 240
           STERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTL
Sbjct: 181 STERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTL 240

Query: 241 AFQEPCKKRSHQKSLYRYT 259
           AFQEPCKKRSHQKSLYRYT
Sbjct: 241 AFQEPCKKRSHQKSLYRYT 259


>gi|157311604 phosphodiesterase 4D interacting protein isoform 1 [Homo
            sapiens]
          Length = 2346

 Score =  393 bits (1009), Expect = e-110
 Identities = 201/212 (94%), Positives = 203/212 (95%)

Query: 13   VLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAPPKLEG 72
            +L DSAVSPPVRDVGMNSPALV PSSASSTPGSET IINR +GLGLDTSPVMK PPKLEG
Sbjct: 2106 LLQDSAVSPPVRDVGMNSPALVFPSSASSTPGSETPIINRANGLGLDTSPVMKTPPKLEG 2165

Query: 73   DATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLEAQGTGVL 132
            DATDGSFANKHGRHVIGHIDDYSALRQQI EGKLLVKKIVSLVRSACSFPGLEAQGT VL
Sbjct: 2166 DATDGSFANKHGRHVIGHIDDYSALRQQIAEGKLLVKKIVSLVRSACSFPGLEAQGTEVL 2225

Query: 133  GSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGESTERELLELRTK 192
            GSKGIHELRSSTSALHHALEESASLLTMFWR ALPSTHIPVLPGKVGESTERELLELRTK
Sbjct: 2226 GSKGIHELRSSTSALHHALEESASLLTMFWRAALPSTHIPVLPGKVGESTERELLELRTK 2285

Query: 193  VSKQERLLQSTAEHLKNANQQKESMEQFIVSQ 224
            VSKQERLLQST EHLKNANQQKESMEQFIVSQ
Sbjct: 2286 VSKQERLLQSTTEHLKNANQQKESMEQFIVSQ 2317


>gi|239747450 PREDICTED: similar to phosphodiesterase 4D interacting
           protein [Homo sapiens]
          Length = 236

 Score =  381 bits (978), Expect = e-106
 Identities = 197/214 (92%), Positives = 201/214 (93%)

Query: 16  DSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAPPKLEGDAT 75
           DSAVSPPVRDVGMNS ALVLPSSASST GSETAIINRT+GLGLDTSPVMK PPKLEGDAT
Sbjct: 6   DSAVSPPVRDVGMNSQALVLPSSASSTSGSETAIINRTNGLGLDTSPVMKTPPKLEGDAT 65

Query: 76  DGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLEAQGTGVLGSK 135
           DGSFA+KHGRHVIGHIDDYSALRQQI EGKLLVKKIVSLVRSACSFPGLEAQGT VLGSK
Sbjct: 66  DGSFASKHGRHVIGHIDDYSALRQQIAEGKLLVKKIVSLVRSACSFPGLEAQGTEVLGSK 125

Query: 136 GIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGESTERELLELRTKVSK 195
           GIHELRSSTSALHHALEESASLLTMFWR ALPSTHIP LPGKV ESTERELLELRTKVSK
Sbjct: 126 GIHELRSSTSALHHALEESASLLTMFWRAALPSTHIPALPGKVRESTERELLELRTKVSK 185

Query: 196 QERLLQSTAEHLKNANQQKESMEQFIVSQREIPK 229
           QE LLQSTAEHLK  NQQKESMEQFI+SQR  P+
Sbjct: 186 QEWLLQSTAEHLKIDNQQKESMEQFIISQRRFPE 219


>gi|58535453 CDK5 regulatory subunit associated protein 2 isoform b
            [Homo sapiens]
          Length = 1814

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 29   NSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAPPKLEGDATDGS-FANKHGRHV 87
            +S   V P S S TP       N T  L  D+     + P +    T    +A+K+GRHV
Sbjct: 1592 DSSQAVTPKSVSETPPLSG---NDTDSLSCDSGSSATSTPCVSRLVTGHHLWASKNGRHV 1648

Query: 88   IGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLEAQGTGVLGSKGIH-----ELRS 142
            +G I+DY AL +QI +G+ L+ ++    + A S    E      LG+KG H     +  S
Sbjct: 1649 LGLIEDYEALLKQISQGQRLLAEMDIQTQEAPSSTSQE------LGTKGPHPAPLSKFVS 1702

Query: 143  STSALHHALEESASLLTMFWRVALPST-HIPVLPGKVGESTERELLELRTKVSKQERLLQ 201
            S S     LEE+   L + WRV+LP     P+   ++GE  + E+ +L  K+ +QE+ LQ
Sbjct: 1703 SVSTAKLTLEEAYRRLKLLWRVSLPEDGQCPLHCEQIGE-MKAEVTKLHKKLFEQEKKLQ 1761

Query: 202  STAEHLK-NANQQKESMEQFIVSQREIPK 229
            +T + L+ +  Q+K   +Q +V+ + + K
Sbjct: 1762 NTMKLLQLSKRQEKVIFDQLVVTHKILRK 1790


>gi|58535451 CDK5 regulatory subunit associated protein 2 isoform a
            [Homo sapiens]
          Length = 1893

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 29   NSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAPPKLEGDATDGS-FANKHGRHV 87
            +S   V P S S TP       N T  L  D+     + P +    T    +A+K+GRHV
Sbjct: 1671 DSSQAVTPKSVSETPPLSG---NDTDSLSCDSGSSATSTPCVSRLVTGHHLWASKNGRHV 1727

Query: 88   IGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLEAQGTGVLGSKGIH-----ELRS 142
            +G I+DY AL +QI +G+ L+ ++    + A S    E      LG+KG H     +  S
Sbjct: 1728 LGLIEDYEALLKQISQGQRLLAEMDIQTQEAPSSTSQE------LGTKGPHPAPLSKFVS 1781

Query: 143  STSALHHALEESASLLTMFWRVALPST-HIPVLPGKVGESTERELLELRTKVSKQERLLQ 201
            S S     LEE+   L + WRV+LP     P+   ++GE  + E+ +L  K+ +QE+ LQ
Sbjct: 1782 SVSTAKLTLEEAYRRLKLLWRVSLPEDGQCPLHCEQIGE-MKAEVTKLHKKLFEQEKKLQ 1840

Query: 202  STAEHLK-NANQQKESMEQFIVSQREIPK 229
            +T + L+ +  Q+K   +Q +V+ + + K
Sbjct: 1841 NTMKLLQLSKRQEKVIFDQLVVTHKILRK 1869


>gi|221218991 neuroblastoma breakpoint family, member 4 [Homo
           sapiens]
          Length = 638

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 56  LGLDTSPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLV 115
           L L+ S  MK PP+LE DA +GS +N  GR V G I     L  + +  +L   K     
Sbjct: 555 LVLEPSLGMKNPPQLEDDALEGSASNTQGRQVTGRIRASLVLILKTIRRRLPFSK----W 610

Query: 116 RSACSFPGLEAQGTGVLGSKG 136
           R A  F G  A+   +  + G
Sbjct: 611 RLAFRFAGPHAESAEIPNTAG 631


>gi|221136848 neuroblastoma breakpoint family, member 6 isoform 2
           [Homo sapiens]
          Length = 638

 Score = 37.0 bits (84), Expect = 0.017
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query: 56  LGLDTSPVMKAPPKLEGDATDGSFANKHGRHVIGHI 91
           L L+ S  MK PP+LE DA +GS +N  GR V G I
Sbjct: 555 LVLEPSLGMKNPPQLEDDALEGSASNTQGRQVTGRI 590


>gi|221136844 neuroblastoma breakpoint family, member 6 isoform 1
           [Homo sapiens]
          Length = 667

 Score = 37.0 bits (84), Expect = 0.017
 Identities = 19/36 (52%), Positives = 23/36 (63%)

Query: 56  LGLDTSPVMKAPPKLEGDATDGSFANKHGRHVIGHI 91
           L L+ S  MK PP+LE DA +GS +N  GR V G I
Sbjct: 584 LVLEPSLGMKNPPQLEDDALEGSASNTQGRQVTGRI 619


>gi|4758648 kinesin family member 5B [Homo sapiens]
          Length = 963

 Score = 33.9 bits (76), Expect = 0.15
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 9/65 (13%)

Query: 180 ESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVT 239
           E  E+EL   + ++S+ E  ++S  E+L+N  Q+K  +E+ +          A+   LV 
Sbjct: 623 EENEKELAACQLRISQHEAKIKSLTEYLQNVEQKKRQLEESV---------DALSEELVQ 673

Query: 240 LAFQE 244
           L  QE
Sbjct: 674 LRAQE 678



 Score = 28.9 bits (63), Expect = 4.7
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 7/50 (14%)

Query: 180 ESTERELLELRTKVSKQERLLQSTAEHL---KNANQQKESMEQFIVSQRE 226
           ++   EL++LR     QE++ +   EHL   + AN+ K+++EQ I S RE
Sbjct: 665 DALSEELVQLRA----QEKVHEMEKEHLNKVQTANEVKQAVEQQIQSHRE 710


>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
          Length = 1184

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 44/174 (25%), Positives = 69/174 (39%), Gaps = 19/174 (10%)

Query: 59   DTSPVMKAPPKLEGDATDGSFANKHGRHVIGHIDDYSALRQQ--IVEGKLLVKKIVSLVR 116
            D  P+    P  +G    G    K+  H        +A RQ+   + G     K V    
Sbjct: 946  DQEPIRCPVPGCDGQ---GHITGKYASHRSASGCPLAAKRQKDGYLNGSQFSWKSVKTEG 1002

Query: 117  SACSFPGLEAQGTGVLGSKGIHELRS----STSALHHALEESASLLTMFWRVALP---ST 169
             +C  PG +  G  V GS   H   S    +TSA+  A      +LT+  R +       
Sbjct: 1003 MSCPTPGCDGSGH-VSGSFLTHRSLSGCPRATSAMKKAKLSGEQMLTIKQRASNGIENDE 1061

Query: 170  HIPVLPGKVGE------STERELLELRTKVSKQERLLQSTAEHLKNANQQKESM 217
             I  L  ++ E        E ++++LRT+++  E  L++  E  K   QQ ES+
Sbjct: 1062 EIKQLDEEIKELNESNSQMEADMIKLRTQITTMESNLKTIEEENKVIEQQNESL 1115


>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
          Length = 1417

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 138 HELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGESTERELLELRTKVSKQE 197
           H L +   ++H  L +S + ++M       +  +P+L        E +++ L  +VS Q+
Sbjct: 253 HSLMTKFESIHFELTQSRAKVSMLESAQQQAASVPIL--------EEQIINLEAEVSAQD 304

Query: 198 RLLQSTAEHLKNANQQKESMEQFIVSQRE 226
           ++L+     L+ + +     EQ +   +E
Sbjct: 305 KVLREAENKLEQSQKMVIEKEQSLQESKE 333


>gi|238859651 pleckstrin homology domain containing family A member
           4 isoform 1 [Homo sapiens]
          Length = 779

 Score = 32.3 bits (72), Expect = 0.42
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 173 VLPGKVGESTERELLE---LRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQRE 226
           +LPG   EST  + LE   L TK+  Q+RLL+   E +    ++KE +E  +   R+
Sbjct: 348 LLPGPPLESTFHQSLETDTLLTKLCGQDRLLRRLQEEIDQKQEEKEQLEAALELTRQ 404


>gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulated
           kinase 1B isoform a [Homo sapiens]
          Length = 629

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 19/69 (27%)

Query: 21  PPVRDVGMNSPALV-------------------LPSSASSTPGSETAIINRTHGLGLDTS 61
           PP+ D  MNSP +                     P+SASS PG+   +  +   LG   S
Sbjct: 495 PPITDCEMNSPQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGRPPS 554

Query: 62  PVMKAPPKL 70
           P    PP+L
Sbjct: 555 PTSPPPPEL 563


>gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulated
           kinase 1B isoform c [Homo sapiens]
          Length = 601

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 19/69 (27%)

Query: 21  PPVRDVGMNSPALV-------------------LPSSASSTPGSETAIINRTHGLGLDTS 61
           PP+ D  MNSP +                     P+SASS PG+   +  +   LG   S
Sbjct: 467 PPITDCEMNSPQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGRPPS 526

Query: 62  PVMKAPPKL 70
           P    PP+L
Sbjct: 527 PTSPPPPEL 535


>gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulated
           kinase 1B isoform b [Homo sapiens]
          Length = 589

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 19/69 (27%)

Query: 21  PPVRDVGMNSPALV-------------------LPSSASSTPGSETAIINRTHGLGLDTS 61
           PP+ D  MNSP +                     P+SASS PG+   +  +   LG   S
Sbjct: 455 PPITDCEMNSPQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGRPPS 514

Query: 62  PVMKAPPKL 70
           P    PP+L
Sbjct: 515 PTSPPPPEL 523


>gi|37574601 zinc finger protein 232 [Homo sapiens]
          Length = 444

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 8/51 (15%)

Query: 180 ESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKG 230
           E+T    LEL+ +  K ERL  S A        Q+ES  Q +V  +EIP G
Sbjct: 257 EATSEGTLELQQRNPKAERLRWSPA--------QEESFRQMVVIHKEIPTG 299


>gi|238859653 pleckstrin homology domain containing family A member
           4 isoform 2 [Homo sapiens]
          Length = 583

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 175 PGKVGESTERELLE---LRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQRE 226
           PG   EST  + LE   L TK+  Q+RLL+   E +    ++KE +E  +   R+
Sbjct: 325 PGPPLESTFHQSLETDTLLTKLCGQDRLLRRLQEEIDQKQEEKEQLEAALELTRQ 379


>gi|70166832 glutamate receptor, ionotropic, N-methyl
           D-aspartate-like 1A isoform 2 [Homo sapiens]
          Length = 211

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 13/37 (35%), Positives = 25/37 (67%)

Query: 183 ERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQ 219
           +R L+ELR  + +QERLL++  + +  A+Q ++  E+
Sbjct: 18  QRSLVELREMLKRQERLLRNELQRITIADQGEQQSEE 54


>gi|197313748 SET domain containing 2 [Homo sapiens]
          Length = 2564

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 18/153 (11%)

Query: 21  PPVRDVGMNSPALVL-PSSASSTPGSETAIINRTHGLGLDTS-------PVMKAPPKLEG 72
           PP +   ++SPA V  P +   TP   T ++     L +D +       P++  P  LE 
Sbjct: 195 PPAQATTLSSPAPVTEPVALPHTP--ITVLMAAPVPLPVDVAVRSLKEPPIIIVPESLEA 252

Query: 73  DATDGSFAN---KHGRHVIGHIDDYSALRQQIVEGKLLVKKIVSLVRSACSFPGLE---A 126
           D    + +N   +H   ++    D S+ ++    GK       S +  +C   G +   +
Sbjct: 253 DTKQDTISNSLEEHVTQILNEQADISSKKEDSHIGKDEEIPDSSKISLSCKKTGSKKKSS 312

Query: 127 QGTGV-LGSKGIHE-LRSSTSALHHALEESASL 157
           Q  G+ LGS+   + +R+S+S   H L+ SAS+
Sbjct: 313 QSEGIFLGSESDEDSVRTSSSQRSHDLKFSASI 345


>gi|9945439 septin 5 [Homo sapiens]
          Length = 369

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 27/132 (20%)

Query: 100 QIVEGKLLVKKIVSLVRSA-CSFPGLEAQGTGVLGSKGIHELRSSTSALH------HALE 152
           Q V G+L    IV +   A C F  L      +L    +H+L+  T  +H      H ++
Sbjct: 258 QRVRGRLYPWGIVEVENQAHCDFVKLR----NMLIRTHMHDLKDVTCDVHYENYRAHCIQ 313

Query: 153 ESASLLTMFWRVALPSTHIPVLPGKVGESTERELLELRTKVSKQERLLQSTAEHLKNANQ 212
           +  S LT   R+  P   IP+LP             L T  ++ E+L++   E L+   +
Sbjct: 314 QMTSKLTQDSRMESP---IPILP-------------LPTPDAETEKLIRMKDEELRRMQE 357

Query: 213 QKESMEQFIVSQ 224
             + M+Q +  Q
Sbjct: 358 MLQRMKQQMQDQ 369


>gi|68299759 ecotropic viral integration site 5 [Homo sapiens]
          Length = 810

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 13/107 (12%)

Query: 128 GTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHI-----------PVLPG 176
           G  V   K   +L S+ S + + +  + S +    +VA PST +           P L  
Sbjct: 15  GKQVATDKVAEKLSSTLSWVKNTVSHTVSQMAS--QVASPSTSLHTTSSSTTLSTPALSP 72

Query: 177 KVGESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVS 223
                   + LEL  K+ +Q RLL++ ++ L++ N  + +    +VS
Sbjct: 73  SSPSQLSPDDLELLAKLEEQNRLLETDSKSLRSVNGSRRNSGSSLVS 119


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 17/74 (22%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 183 ERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTLAF 242
           E++ LEL+ K++  ++LL    E +   NQ+ ++M+  + + ++  + S+     + +  
Sbjct: 342 EKKTLELKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQL-MGT 400

Query: 243 QEPCKKRSHQKSLY 256
            E  +KR+H+ S +
Sbjct: 401 VEELQKRNHKDSQF 414


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 17/74 (22%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 183 ERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTLAF 242
           E++ LEL+ K++  ++LL    E +   NQ+ ++M+  + + ++  + S+     + +  
Sbjct: 342 EKKTLELKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKERQSSEEIKQL-MGT 400

Query: 243 QEPCKKRSHQKSLY 256
            E  +KR+H+ S +
Sbjct: 401 VEELQKRNHKDSQF 414


>gi|4758448 guanine nucleotide binding protein gamma 11 precursor
           [Homo sapiens]
          Length = 73

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 166 LPSTHIPVLPGKVGESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQFI--VS 223
           +P+ HI  LP K  E  + E+ +LR +V  Q + +   +E +KN  +++   +  +  + 
Sbjct: 1   MPALHIEDLPEK--EKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIP 58

Query: 224 QREIP---KGSAVYS 235
           + + P   KGS V S
Sbjct: 59  EDKNPFKEKGSCVIS 73


>gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens]
          Length = 587

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 21/71 (29%), Positives = 30/71 (42%)

Query: 8   QGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAP 67
           QGS E   D+  SPP         +    S  SSTP +  +  + T G   +++ V  +P
Sbjct: 411 QGSTEATLDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEESTTVHSSP 470

Query: 68  PKLEGDATDGS 78
              E  A  GS
Sbjct: 471 GSTETTALPGS 481


>gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]
          Length = 456

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 21/71 (29%), Positives = 30/71 (42%)

Query: 8   QGSGEVLDDSAVSPPVRDVGMNSPALVLPSSASSTPGSETAIINRTHGLGLDTSPVMKAP 67
           QGS E   D+  SPP         +    S  SSTP +  +  + T G   +++ V  +P
Sbjct: 305 QGSTEATLDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEESTTVHSSP 364

Query: 68  PKLEGDATDGS 78
              E  A  GS
Sbjct: 365 GSTETTALPGS 375


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 128  GTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVLPGKVGESTERELL 187
            GT       + E   S+ +    LEE+        R A   +H P+LP     S E EL 
Sbjct: 993  GTSPTSLSSLEEDSDSSPSRRQRLEEAKQQ-----RKARHRSHGPLLPTIEDSSEEEELR 1047

Query: 188  ELRTKVSKQERLLQSTAEHLKNANQQKESMEQFIVSQREIPKGSAVYSSLVTLAFQEPCK 247
            E    + +QE++ +   + +++  ++    ++ + +QR   +     S+L  +    P +
Sbjct: 1048 EEEELLREQEKMREVEQQRIRSTARKTRRDKEELRAQRRRERSKTPPSNLSPIEDASPTE 1107

Query: 248  K 248
            +
Sbjct: 1108 E 1108


>gi|153792110 HEG homolog 1 [Homo sapiens]
          Length = 1381

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 18/173 (10%)

Query: 10  SGEVLDDSAVSPPVRDVGMNSPALV-LPSSASSTPGSETAIINRTHGLGLDTSP---VMK 65
           S +V   SA  P     G+N+  L     S   + GS TA+ +R++     TS    +  
Sbjct: 466 SADVTGSSASYPE----GVNASVLTQFSDSTVQSGGSHTALGDRSYSESSSTSSSESLNS 521

Query: 66  APPKLEGDATDGSFANKHGRHVIGHID----DYSALRQQIVEGKLLVKKIVSLVRSACSF 121
           + P+ E      S+    G  +         D++ L     +G+   + ++S+  ++ S 
Sbjct: 522 SAPRGERSIAGISYGQVRGTAIEQRTSSDHTDHTYLSSTFTKGE---RALLSITDNSSSS 578

Query: 122 PGLEAQGTGVLGSKGIHELRSSTSALHHALEESASLLTMFWRVALPSTHIPVL 174
             +E+  + +  S   H   S  S+  HA  E +++ +     A PST  PVL
Sbjct: 579 DIVESSTSYIKISNSSH---SEYSSFFHAQTERSNISSYDGEYAQPSTESPVL 628


>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
          Length = 3117

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 136  GIHELRSSTSALHHALEESASLLTMFWRVA------LPSTHIPVLPGKVGESTERELLEL 189
            G+H   ++  +  +A+EES   L+   RV         S  +  +     +  ER+L  L
Sbjct: 1324 GLHHRMAAELSYLNAIEESVRQLSDVERVRGISLAQQESVSLAQIIKAQQQRHERDLALL 1383

Query: 190  RTKVSKQERLLQSTAEHLKN--ANQQKESMEQFIVSQREI 227
            + K  ++    Q   E  +N  A    ES++Q + SQRE+
Sbjct: 1384 KLKAEQEALESQRQLEETRNKAAQVHAESLQQVVQSQREV 1423


>gi|222537750 ankyrin repeat domain 30B [Homo sapiens]
          Length = 1392

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 12/42 (28%), Positives = 25/42 (59%)

Query: 178  VGESTERELLELRTKVSKQERLLQSTAEHLKNANQQKESMEQ 219
            V E  +R+  E + ++ K E + Q+  +++    +Q+ES+EQ
Sbjct: 1260 VSEHAQRDRCETQCQMKKAEHMYQNEQDNVDKHTEQQESLEQ 1301


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,951,740
Number of Sequences: 37866
Number of extensions: 431747
Number of successful extensions: 1608
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1572
Number of HSP's gapped (non-prelim): 63
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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