Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239752632
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
sapiens]
(231 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 467 e-132
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ... 467 e-132
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 352 1e-97
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 323 1e-88
gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo ... 300 9e-82
gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo ... 244 5e-65
gi|239756562 PREDICTED: hypothetical protein [Homo sapiens] 239 1e-63
gi|239754599 PREDICTED: hypothetical protein [Homo sapiens] 229 1e-60
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 226 1e-59
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 86 3e-17
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 50 2e-06
gi|4885379 histone cluster 1, H1e [Homo sapiens] 44 2e-04
gi|239756880 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo ... 40 0.001
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 40 0.001
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 40 0.002
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 40 0.002
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 40 0.002
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|12056465 fibrillarin [Homo sapiens] 40 0.002
gi|4885375 histone cluster 1, H1c [Homo sapiens] 40 0.002
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 39 0.004
gi|57864582 hornerin [Homo sapiens] 39 0.005
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 39 0.005
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 39 0.005
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 39 0.005
gi|9966841 cell death regulator aven [Homo sapiens] 39 0.005
gi|12707580 paired-like homeobox 2b [Homo sapiens] 38 0.008
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 467 bits (1201), Expect = e-132
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 1 MSSPVLEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAG 60
MSSPVLEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAG
Sbjct: 1 MSSPVLEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAG 60
Query: 61 CDPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS 120
CDPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS
Sbjct: 61 CDPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS 120
Query: 121 GPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRR 180
GPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRR
Sbjct: 121 GPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRR 180
Query: 181 RGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA 231
RGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA
Sbjct: 181 RGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA 231
Score = 54.3 bits (129), Expect = 9e-08
Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 25/142 (17%)
Query: 86 QVQRRSMQAAAAQEQSLGRGCLGKEPPK----------WESSTRSGPRRCLSQDASRSGS 135
+++RR +AAAA +S G G GK+P K W+ R G + A+ G
Sbjct: 177 KIRRRGQKAAAAGAKSCGGG--GKKPQKARAVGARRRGWKKLRRRGKKA-----AAAGGE 229
Query: 136 RVCRSRPQTRGGGGKKPRR-GQKAATAGA-------KSRGGGVRSRGGKKIRRRGQKAAA 187
+ + Q G KKPRR GQKAA AG + + V ++ KK RRR +A
Sbjct: 230 KAGKKLRQQGEKGRKKPRRRGQKAAAAGGERCKKPRRQKAAAVSAKSPKKPRRRVLNSAR 289
Query: 188 AGAKSCGGGGKKPQKARAVGAR 209
GA+S ++ QK+ A +R
Sbjct: 290 LGAESRKNPQRRGQKSMAAKSR 311
>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
sapiens]
Length = 231
Score = 467 bits (1201), Expect = e-132
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 1 MSSPVLEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAG 60
MSSPVLEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAG
Sbjct: 1 MSSPVLEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAG 60
Query: 61 CDPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS 120
CDPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS
Sbjct: 61 CDPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS 120
Query: 121 GPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRR 180
GPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRR
Sbjct: 121 GPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRR 180
Query: 181 RGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA 231
RGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA
Sbjct: 181 RGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA 231
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 352 bits (904), Expect = 1e-97
Identities = 198/269 (73%), Positives = 207/269 (76%), Gaps = 42/269 (15%)
Query: 1 MSSPVLEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAG 60
MSSPVLEPSPGP+SPYLHG YLLLGEVLGHSALGAQHAQPANGDADELLELPALLQH G
Sbjct: 1 MSSPVLEPSPGPRSPYLHGPYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHPTG 60
Query: 61 CDPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS 120
CDPCASLRDS VTPATALLLLSHRG+ QRRS+QAAAAQEQS GRGCLGKEPP ES TRS
Sbjct: 61 CDPCASLRDSRVTPATALLLLSHRGRAQRRSIQAAAAQEQSTGRGCLGKEPPSQESWTRS 120
Query: 121 GPRRCLSQDASRSGSRVCRSRPQTRGGGGKKP---------------------RRGQKAA 159
PRRCLSQDA RSGSRVCRSRPQTRGGGGK+P RRGQKAA
Sbjct: 121 DPRRCLSQDAVRSGSRVCRSRPQTRGGGGKQPRRQKAAVAGAKSRGGEGKKPQRRGQKAA 180
Query: 160 TAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGG------GKK-----------PQK 202
TAGAKSRGGGVRS GGKK+ RRGQK AAGAK CGGG G+K PQK
Sbjct: 181 TAGAKSRGGGVRSLGGKKM-RRGQK-GAAGAKRCGGGKQPRRRGQKASKSGGVRCQTPQK 238
Query: 203 ARAVGARRRGWKKLRRRGKKAAAAGGEKA 231
A A G + R KKLR+RG+KAAAAG E A
Sbjct: 239 AAAQGVKSR--KKLRQRGQKAAAAGQEAA 265
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 323 bits (827), Expect = 1e-88
Identities = 178/234 (76%), Positives = 190/234 (81%), Gaps = 5/234 (2%)
Query: 1 MSSPVLEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAG 60
MSSPVLEP+PGP+ YLH YLLLGEVLGHSALGAQ AQ ANGDADELLELPALLQ AG
Sbjct: 1 MSSPVLEPNPGPRPRYLHSPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQLPAG 60
Query: 61 CDPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS 120
CDPCASLRDS VTPATALL LSHRG+ QRRSM AAAAQE+SLGRGCLGKEPP ES TRS
Sbjct: 61 CDPCASLRDSRVTPATALLPLSHRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRS 120
Query: 121 GPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRR 180
PR C+SQDASRSGSRVCRSRPQTRGGGGKKPRR QK A AGAKSR GG + R G+K RR
Sbjct: 121 DPRHCISQDASRSGSRVCRSRPQTRGGGGKKPRR-QKDAAAGAKSR-GGKKPRRGRKPRR 178
Query: 181 RGQKAAAAGAKSCGGGGKKP--QKARAVGARR-RGWKKLRRRGKKAAAAGGEKA 231
RGQK+ AAGAKS G GGKKP QK A GA+ G KK RR G+K G++A
Sbjct: 179 RGQKSTAAGAKSRGEGGKKPRQQKPAAAGAKSGLGDKKSRRWGRKKPGRWGQEA 232
Score = 28.9 bits (63), Expect = 3.9
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 113 KWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGGGGKKP-RRGQKAATAGAKSRGG 168
+W+ + ++ G + +R ++ G GGKK RRGQ+A KSRGG
Sbjct: 262 QWQKAAAEKVAVAGAESCGGRGQKAAAARAKSGGFGGKKQRRRGQRA----PKSRGG 314
>gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo
sapiens]
Length = 240
Score = 300 bits (767), Expect = 9e-82
Identities = 167/234 (71%), Positives = 179/234 (76%), Gaps = 12/234 (5%)
Query: 1 MSSPVLEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAG 60
MSSPVLEP+PGP+ YLHG YLLLGEVLGHSALGAQ AQ ANGDADELLELPALLQ AG
Sbjct: 1 MSSPVLEPNPGPRPRYLHGPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQLPAG 60
Query: 61 CDPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS 120
CDPCASLRDS VTPATALL LSHRG+ QRRSM AAAAQE+SLGRGCLGKEPP ES TRS
Sbjct: 61 CDPCASLRDSRVTPATALLPLSHRGRAQRRSMHAAAAQERSLGRGCLGKEPPNRESWTRS 120
Query: 121 GPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPR-RGQKAATAGAKSRGGGVRSRGGKKIR 179
PR C+SQDASRSGSRVCRSRPQTRG GGKK R RG+KAA V++ G+ +
Sbjct: 121 DPRHCISQDASRSGSRVCRSRPQTRGSGGKKLRQRGEKAA---------AVKTCSGRSKK 171
Query: 180 RRGQKAAAAGAKSCGGGGKKPQKARAVGAR--RRGWKKLRRRGKKAAAAGGEKA 231
QKAA GAKS GG GKKPQKA A GA+ G KKL R GKK G + A
Sbjct: 172 PGRQKAAVMGAKSRGGRGKKPQKAAAAGAKSCNGGGKKLGRWGKKPGRRGQKAA 225
>gi|239741651 PREDICTED: hypothetical protein XP_002342270 [Homo
sapiens]
Length = 337
Score = 244 bits (623), Expect = 5e-65
Identities = 153/273 (56%), Positives = 163/273 (59%), Gaps = 68/273 (24%)
Query: 19 GLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCASLRDSCVTPATAL 78
G YLLLGEVLGHSALGAQ AQ ANGDADELLELPALLQ AG PCASLRDS VTPATAL
Sbjct: 12 GPYLLLGEVLGHSALGAQPAQAANGDADELLELPALLQRPAGRGPCASLRDSRVTPATAL 71
Query: 79 LLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVC 138
LLLSH + QRRSM+AAAAQE+S GR LGKEP ES TRS P RCLSQDA R+GS+VC
Sbjct: 72 LLLSHCSRAQRRSMRAAAAQERSPGRRRLGKEPLIRESWTRSAPWRCLSQDAGRAGSQVC 131
Query: 139 RSRPQTRGGGGKKPRR-----------------GQKAATAGAKSRGGG------------ 169
S PQTRGGGGKK +R GQKAATAGAKS GGG
Sbjct: 132 GSSPQTRGGGGKKLQRQKATVMGAKSRKKPQHWGQKAATAGAKSPGGGGKKPGQEKPAAT 191
Query: 170 ---------------------------------------VRSRGGKKIRRRGQKAAAAGA 190
R GG+K R RGQKA AGA
Sbjct: 192 GEKTRAAKSRGGGGKKPRREKPAAAGAKNPQKAAAAGAKFREAGGRKPRWRGQKATEAGA 251
Query: 191 KSCGGGGKKPQKARAVGARRRGWKKLRRRGKKA 223
KS GGGG KPQK A GA+ G KK RRRG+ +
Sbjct: 252 KSRGGGGIKPQKPAAAGAKIHGGKKPRRRGQSS 284
Score = 28.1 bits (61), Expect = 6.6
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 19/94 (20%)
Query: 85 GQVQRRSMQAAAAQEQSLGRGCLGKE-------PPKW--ESSTRSGPRRCLSQDASRSGS 135
G+ RR AAA + G + P+W + +T +G + SR G
Sbjct: 205 GKKPRREKPAAAGAKNPQKAAAAGAKFREAGGRKPRWRGQKATEAGAK-------SRGGG 257
Query: 136 RVCRSRPQTRGG---GGKKPRRGQKAATAGAKSR 166
+ +P G GGKKPRR +++ G + +
Sbjct: 258 GIKPQKPAAAGAKIHGGKKPRRRGQSSGNGVEGQ 291
>gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 239 bits (610), Expect = 1e-63
Identities = 144/232 (62%), Positives = 162/232 (69%), Gaps = 26/232 (11%)
Query: 6 LEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCA 65
L + GP +PYL G YLLLGEV+GHSALGAQ AQ A DE+LELPALLQ AG PCA
Sbjct: 3 LRQNRGPHTPYLQGPYLLLGEVVGHSALGAQPAQAA----DEVLELPALLQRPAGRRPCA 58
Query: 66 SLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRC 125
S R +TPATALLLLSHRG+ +RRSMQAAAA+ S GR +GK PP ES TRS P+RC
Sbjct: 59 SHRGRRITPATALLLLSHRGRAERRSMQAAAAKAGSPGRRRVGKGPPSRESWTRSAPQRC 118
Query: 126 LSQDASRSGSRVCRSRPQTRGG-------------GGKKPRRGQKAATAGAKSRGGGVRS 172
SQDA R+GSRVCRSRPQ+RGG GGK+PRR QK A AGAKSRGG
Sbjct: 119 PSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRR-QKPAAAGAKSRGG---- 173
Query: 173 RGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRR--GWKKLRRRGKK 222
+ KK RRRGQKAA AK+ GGGG KPQKA A GA+ R G K RRG++
Sbjct: 174 KSHKKPRRRGQKAAP--AKNSGGGGNKPQKAAAAGAKNRGGGGGKKPRRGRR 223
>gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 229 bits (584), Expect = 1e-60
Identities = 139/228 (60%), Positives = 152/228 (66%), Gaps = 21/228 (9%)
Query: 19 GLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCASLRDSCVTPATAL 78
G YLLLGEV+GHSALGAQ AQ ANGDADELLEL ALLQ AG PCA+L C+TPATAL
Sbjct: 12 GPYLLLGEVVGHSALGAQPAQAANGDADELLELSALLQPRAGRGPCATLSGRCITPATAL 71
Query: 79 LLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVC 138
LLLSHR + Q R MQA AA+ S G G LGKEPP ES T S PRRC QDASR+GS VC
Sbjct: 72 LLLSHRLRAQCRPMQATAAEAGSPGLGRLGKEPPSRESWTGSAPRRCPCQDASRAGSGVC 131
Query: 139 RSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAA----------- 187
RSRPQ+RGGG +KPRR QKAA A AKS GGG + +K GQKAAA
Sbjct: 132 RSRPQSRGGGSRKPRR-QKAAAAQAKSLGGGGKKPRRQKCAAAGQKAAAEESRRGGGKKP 190
Query: 188 --AGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAG--GEKA 231
G K+ G G KKPQKA A G K RRR +KAA A G+KA
Sbjct: 191 RRGGQKAVGAGAKKPQKAAAAGT-----KTPRRRRQKAAKAAVWGQKA 233
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 226 bits (576), Expect = 1e-59
Identities = 141/224 (62%), Positives = 150/224 (66%), Gaps = 30/224 (13%)
Query: 19 GLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLAGCDPCASLRDSCVTPATAL 78
G YLLLGE +GHSALGAQ Q A GDADELLELPALLQ AG PCA+LR +TPA AL
Sbjct: 12 GPYLLLGEAVGHSALGAQPVQAAEGDADELLELPALLQRPAGRGPCATLRSHPITPAPAL 71
Query: 79 LLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVC 138
LLLSH QRRSMQA A+ S GRG LGKEP + ES TRS PRRC QDASR+GSRVC
Sbjct: 72 LLLSHSLPAQRRSMQATVAKAGSPGRGRLGKEPRRRESWTRSAPRRCPYQDASRAGSRVC 131
Query: 139 RSRPQTRGGGGKKP-RRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAK------ 191
RSRPQ RGGG KKP RRGQKA AKSRGG GGKK RGQKAA AGAK
Sbjct: 132 RSRPQNRGGGDKKPRRRGQKA----AKSRGG-----GGKK--PRGQKAAGAGAKKHRKPR 180
Query: 192 -----SCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEK 230
+ GGKK QKA A +R G GKK AAAGG+K
Sbjct: 181 RRGERAAAAGGKKLQKAAAAKSRGGG-------GKKTAAAGGKK 217
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 85.5 bits (210), Expect = 3e-17
Identities = 72/160 (45%), Positives = 83/160 (51%), Gaps = 22/160 (13%)
Query: 84 RGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQ 143
RG+ RR +AA + G G K R PR Q+ R + ++P
Sbjct: 364 RGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRW---QNPRRRAQKAPAAKP- 419
Query: 144 TRGGGGKKP-RRGQKAATAGAKSRGGGVRSRGGKKIRRRG----QKAAAAGAKSCGGGGK 198
RGGG KKP RRG KA AKSRGG RS GGKK RRRG QKAA AGA+S G +
Sbjct: 420 -RGGGSKKPRRRGPKA----AKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQ 474
Query: 199 KPQKARAVGARRRG-------WKKLRRRGKKAAAAGGEKA 231
QKA A G + RG K L RRG+KA AA GEKA
Sbjct: 475 GRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAA-GEKA 513
Score = 76.6 bits (187), Expect = 2e-14
Identities = 69/169 (40%), Positives = 82/169 (48%), Gaps = 31/169 (18%)
Query: 82 SHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSR 141
S G+ RR + E GR +E TR G R+ + +G
Sbjct: 184 SRSGKKPRRRGAKSRGDEDKKGRQ---REAKSRFGKTRGGRRKKHRRPKPAAGGA----- 235
Query: 142 PQTRGGGGKKP----RRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGG-- 195
++R GGGKKP RRGQKAAT G KSR G R G KK+RR+GQ AA AGAK G
Sbjct: 236 -KSRRGGGKKPQKQRRRGQKAATGG-KSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAAT 293
Query: 196 GGKKPQKARAVGAR------------RRGWKKLRRRGKKA--AAAGGEK 230
G+KP A+ G R RG KK RRRG+KA AAA G K
Sbjct: 294 AGEKP-AAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTK 341
Score = 75.5 bits (184), Expect = 4e-14
Identities = 62/166 (37%), Positives = 84/166 (50%), Gaps = 28/166 (16%)
Query: 89 RRSMQAAAAQEQSLGRGCL----GKEPPKWESSTRSGPRR----CLSQDASRSGSRVCRS 140
RR + AAA E++ G G + P+W+ +G + Q+A + + R
Sbjct: 634 RRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAE-ARKKPRRR 692
Query: 141 RPQTRGGGG--------------KKPRRGQKAATAGAKSRG-GGVRSRGGKKIRRRGQKA 185
R ++RG GG KKPR G+ GAKSRG GG +SRG + R K
Sbjct: 693 RAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKK 752
Query: 186 AAAGAKSCGGGGKKPQKARAVGARRR-GWKKLRRRGKKAAAAGGEK 230
AAA +KS GGGG K + R GA+ R G K + G+KAAAAGG+K
Sbjct: 753 AAA-SKSHGGGGAK--RRRGGGAKSRSGEKAVTAGGQKAAAAGGKK 795
Score = 73.9 bits (180), Expect = 1e-13
Identities = 69/186 (37%), Positives = 83/186 (44%), Gaps = 47/186 (25%)
Query: 86 QVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTR 145
Q QRR Q AA G+ +GK + R + A R G+ +P +
Sbjct: 246 QKQRRRGQKAATG----GKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAK 301
Query: 146 GGGGKKP------------------RRGQKA---ATAGAKSRGGG--------VRSRGGK 176
G GG+ P RRGQKA A AG K GGG V+SR K
Sbjct: 302 GRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSR--K 359
Query: 177 KIRRRG-----QKAAAAGAKSCGGGGKK---PQKARAVGARRRGWKKLRRRGKKAAAA-- 226
K RRRG QKA+AAGAKS GGG KK K R G ++ W+ RRR +KA AA
Sbjct: 360 KQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKP 419
Query: 227 --GGEK 230
GG K
Sbjct: 420 RGGGSK 425
Score = 73.2 bits (178), Expect = 2e-13
Identities = 58/159 (36%), Positives = 78/159 (49%), Gaps = 28/159 (17%)
Query: 91 SMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGGGGK 150
++ AAAA + LG G K+ + +++ R Q + +G + + G GG
Sbjct: 41 ALSAAAAGVKILGSG--DKKLRRQKAAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGA 98
Query: 151 KPRRG--QKAATAGAKSRGGGVR----------SRGGKKIRRRGQKAAAAGAKSCGGG-- 196
+ R G QKAA AG KS GG R + G KK R R QK+AAAG+K+ G G
Sbjct: 99 ENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQ 158
Query: 197 ------------GKKPQKARAVGARRRGWKKLRRRGKKA 223
G+KPQKA A GA+ R KK RRRG K+
Sbjct: 159 KAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKS 197
Score = 72.0 bits (175), Expect = 4e-13
Identities = 70/177 (39%), Positives = 79/177 (44%), Gaps = 49/177 (27%)
Query: 84 RGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSG-SRVCRSRP 142
R + RR AA + G G K+P K +R Q A+ G SRV +SR
Sbjct: 221 RRKKHRRPKPAAGGAKSRRGGG---KKPQK---------QRRRGQKAATGGKSRVGKSR- 267
Query: 143 QTRGGGGKKPRR-GQKAATAGAKSRGGGVRS------------------------RGGKK 177
GGG KK RR GQ AA AGAK RG RGGKK
Sbjct: 268 ---GGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKK 324
Query: 178 IRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGK-----KAAAAGGE 229
RRRGQKA A A GG QKA VG + R KK RRRGK KA+AAG +
Sbjct: 325 PRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSR--KKQRRRGKKPRRQKASAAGAK 379
Score = 70.1 bits (170), Expect = 2e-12
Identities = 57/166 (34%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 81 LSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRS 140
+ +RG Q A LG L + P + + + + + GS +
Sbjct: 1 MDYRGHRQCNQAAGRAGPGAPLG-AALARTPVELAAESAAPALSAAAAGVKILGSGDKKL 59
Query: 141 RPQTRGGGGKKPR-RGQKAATAGAKSR--------GGGVRSRGGKKIRRRGQKAAAAGAK 191
R Q GGKK R RGQK A AG ++R GG +RGG + QKAAAAG K
Sbjct: 60 RRQKAAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGE-----QKAAAAGTK 114
Query: 192 SCGGGGKKP----QKARAVGARRRGWK--KLRRRGKKAAAAGGEKA 231
S GG G+KP QKA A G+++ W+ K G K AG +KA
Sbjct: 115 SLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKA 160
Score = 70.1 bits (170), Expect = 2e-12
Identities = 72/210 (34%), Positives = 89/210 (42%), Gaps = 67/210 (31%)
Query: 85 GQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRS------GPRRCLSQDASRSGSRVC 138
G+ R+ Q AA + RG G E + T+S PRR Q A+ +GS+
Sbjct: 82 GKEARQHWQKAAGAGGAENRG--GGEQKAAAAGTKSLGGRGRKPRR-RGQKAAATGSKKP 138
Query: 139 RSRPQTRGGGGKKPRRG---QKAATAGAKSRGG---------GVRSRGGKKIRRRGQKA- 185
R R Q G K R + AA AG KS+GG G +SR GKK RRRG K+
Sbjct: 139 RWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSR 198
Query: 186 --------------------------------AAAGAKSCGGGGKKPQKAR------AVG 207
AA GAKS GGGKKPQK R A G
Sbjct: 199 GDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATG 258
Query: 208 ARRR-------GWKKLRRRGKKAAAAGGEK 230
+ R G KKLRR+G+ AA AG ++
Sbjct: 259 GKSRVGKSRGGGDKKLRRQGQNAALAGAKR 288
Score = 69.3 bits (168), Expect = 3e-12
Identities = 71/191 (37%), Positives = 87/191 (45%), Gaps = 59/191 (30%)
Query: 88 QRRSMQAAAAQEQSLGRG-----CLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRP 142
+RR A + + GRG LG + P+W + RR Q A+++ + +
Sbjct: 287 KRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRR--GQKATKAAAAGTK--- 341
Query: 143 QTRGGGG-------------------KKPRRGQKAATAGAKSRGGGV---------RSRG 174
RGGGG KKPRR QKA+ AGAKSRGGG R G
Sbjct: 342 --RGGGGQQKAAVVGVKSRKKQRRRGKKPRR-QKASAAGAKSRGGGDKKGLREAKRRGDG 398
Query: 175 GKKIR-----RRGQKAAAAGAKSCGGGGKKPQ-------KARAVGARRRGWKKLRRRG-- 220
KK R RR QKA AA K GGG KKP+ K+R +R G KK RRRG
Sbjct: 399 RKKPRWQNPRRRAQKAPAA--KPRGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQK 456
Query: 221 --KKAAAAGGE 229
+KAA AG E
Sbjct: 457 ARQKAAEAGAE 467
Score = 64.7 bits (156), Expect = 6e-11
Identities = 64/183 (34%), Positives = 82/183 (44%), Gaps = 40/183 (21%)
Query: 84 RGQVQRRSMQAAAAQEQSLGRGCLGKEPPK-W---ESSTRSGPRRCLSQDASRSGSRVCR 139
RG ++ +A+AA +S G G W + + +G + + SR + R
Sbjct: 469 RGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRR 528
Query: 140 SRPQTRGG----GGKKPRRGQKAATAGAKSRGGG----VRSRGGKKIRRRGQKAAAAGAK 191
+P G GG K R+ QKA AGA S GGG R GG K R+ GQ AAAA K
Sbjct: 529 QKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAA--K 586
Query: 192 SCGGGGKKP-----------------------QKARAVGARRRGWKKLRRRGKKAAAAGG 228
+ GGG K+P QKA GA+ R KK RRG+K AAA
Sbjct: 587 TRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGTGAKSR--KKPWRRGQKDAAA-A 643
Query: 229 EKA 231
EKA
Sbjct: 644 EKA 646
Score = 64.3 bits (155), Expect = 8e-11
Identities = 58/168 (34%), Positives = 75/168 (44%), Gaps = 28/168 (16%)
Query: 89 RRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQ---DASRSGSRVCRSRPQTR 145
RR AA R GK+P + R ++ D + + + ++R
Sbjct: 428 RRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSR 487
Query: 146 GGGGKKP------RRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKK 199
GGG K RRGQKA AG K+ G +SRG K+ RR QK A AGAKS GG K
Sbjct: 488 GGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRR--QKPAVAGAKSRVGGSKS 545
Query: 200 PQKARAVGA-------------RRRGWKKLRRRGKKAAAA----GGEK 230
Q+ +AV A R G K R+ G+ AAAA GG+K
Sbjct: 546 RQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDK 593
Score = 62.0 bits (149), Expect = 4e-10
Identities = 53/172 (30%), Positives = 73/172 (42%), Gaps = 44/172 (25%)
Query: 85 GQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGS--------- 135
G Q R + AAA +S +G+E + R PRR ++ G
Sbjct: 657 GGKQPRWQKPAAAGSESSAAAAVGQE-----AEARKKPRRRRAKSRGDGGQNAAVGINPW 711
Query: 136 -------RVCRSR------------PQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGK 176
R+ +SR ++RG GG K R G+KAA + + GG R RGG
Sbjct: 712 QRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGG 771
Query: 177 KIRRRGQKAAAAGA-KSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAG 227
R G+KA AG K+ GGKKP + ++ G RG+KAAA G
Sbjct: 772 AKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGG----------RGQKAAAGG 813
Score = 57.0 bits (136), Expect = 1e-08
Identities = 58/171 (33%), Positives = 72/171 (42%), Gaps = 32/171 (18%)
Query: 85 GQVQRRSMQAAAAQEQSLG-------RGCLGKEPPKW-----ESSTRSG-------PRRC 125
G R+ +A AA S G RG G +P +W + TR G +
Sbjct: 542 GSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAA 601
Query: 126 LSQDASRSGSRVCRSRPQTRGGGG----KKP-RRGQKAATAGAKSRGGGVRSRGGKKIRR 180
SRSG ++ Q G G KKP RRGQK A A K+ G SRG +
Sbjct: 602 AGVTKSRSGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQP 661
Query: 181 RGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA 231
R QK AAAG++S A AVG KK RRR K+ GG+ A
Sbjct: 662 RWQKPAAAGSES--------SAAAAVGQEAEARKKPRRRRAKSRGDGGQNA 704
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 50.1 bits (118), Expect = 2e-06
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 88 QRRSMQAAAAQEQSLGRGCLGKEPPK-WESSTRSGPRRCLSQDASRSGSRVCRSRPQTRG 146
++RS +A A S G P W+S R AS S R RSR ++R
Sbjct: 523 RKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRS 582
Query: 147 GGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQ---KA 203
RR ++ + RGG RSR +K RRR + A+ A S ++ + K
Sbjct: 583 -----TRRRSRSTD---RRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKH 634
Query: 204 RAVGARRRGWKKLRRRGKKAAAAGGEKA 231
R G ++ K+ R RG+K + G EKA
Sbjct: 635 RDGGGSKKKKKRSRSRGEKRSGDGSEKA 662
Score = 40.0 bits (92), Expect = 0.002
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 116 SSTRSGPRRCLSQDASRSGSRVCRSRPQTRG---GGGKKPRRGQKAATAGAKSRG----G 168
S +RS RR S D R GSR RSR + R P +++ + RG G
Sbjct: 578 SRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKHRDG 637
Query: 169 GVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVG---ARRRG 212
G + K+ R RG+K + G++ P + + G +RRRG
Sbjct: 638 GGSKKKKKRSRSRGEKRSGDGSEKAPAPAPPPSGSTSCGDRDSRRRG 684
Score = 28.9 bits (63), Expect = 3.9
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 12/83 (14%)
Query: 148 GGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARA-- 205
G KP++ + A AGAK G ++G K + +K + G GG +K++A
Sbjct: 893 GSTKPKKTKVKAKAGAKKTKG---TKGKTKPSKTRKKVRSGGGSGGSGGQVSLKKSKADS 949
Query: 206 -------VGARRRGWKKLRRRGK 221
GA W R K
Sbjct: 950 CSQAAGTKGAEETSWSGEERAAK 972
>gi|4885379 histone cluster 1, H1e [Homo sapiens]
Length = 219
Score = 43.5 bits (101), Expect = 2e-04
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Query: 143 QTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQK 202
QT+G G + K A +G + + + +KA AA AK G KKP+K
Sbjct: 95 QTKGTGASGSFKLNKKAASG--------------EAKPKAKKAGAAKAKKPAGAAKKPKK 140
Query: 203 ARAVGARRRGWKKLRRRGKKAAAAGGEK 230
A ++ KK ++ KK AAA G K
Sbjct: 141 ATGAATPKKSAKKTPKKAKKPAAAAGAK 168
Score = 38.1 bits (87), Expect = 0.006
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 140 SRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQK-AAAAGAKSCGGGGK 198
++P+ + G K ++ AA K+ G + KK ++ +K AAAAGAK K
Sbjct: 116 AKPKAKKAGAAKAKKPAGAAKKPKKATGAATPKKSAKKTPKKAKKPAAAAGAKKA----K 171
Query: 199 KPQKARAVGARRRGWKKLRRRGKKAAAA 226
P+KA+A ++ + + K AA
Sbjct: 172 SPKKAKAAKPKKAPKSPAKAKAVKPKAA 199
>gi|239756880 PREDICTED: hypothetical protein [Homo sapiens]
Length = 376
Score = 40.4 bits (93), Expect = 0.001
Identities = 55/217 (25%), Positives = 78/217 (35%), Gaps = 40/217 (18%)
Query: 6 LEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLA----GC 61
L GP P G+ ++ A A+P D+ + LP ++ L C
Sbjct: 186 LPAEQGPNLPTRRGV---------QKSVSAMAARPGPPDSTHIF-LPCPVRRLQRNNKDC 235
Query: 62 DPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSG 121
D + R+ A+ +L L G E+ G GCL PP+ R
Sbjct: 236 DLASPPREGAFAGASPVLRLRDVGT------------ERESGAGCLRSAPPR-AGDARQQ 282
Query: 122 PRRCLS-----QDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGK 176
+RC S + SRS S RS P+ G G + A+ A S R RG
Sbjct: 283 TQRCQSPSGGCEKGSRSVSGSRRSEPRPPAGLGD----ARAASPADTVSDDVSRRHRGCF 338
Query: 177 KIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGW 213
R R + GGG + R +G +RGW
Sbjct: 339 AGRARAPTGPRRRFANLGGG----DRTRPLGLLKRGW 371
>gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo
sapiens]
Length = 376
Score = 40.4 bits (93), Expect = 0.001
Identities = 55/217 (25%), Positives = 78/217 (35%), Gaps = 40/217 (18%)
Query: 6 LEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLA----GC 61
L GP P G+ ++ A A+P D+ + LP ++ L C
Sbjct: 186 LPAEQGPNLPTRRGV---------QKSVSAMAARPGPPDSTHIF-LPCPVRRLQRNNKDC 235
Query: 62 DPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSG 121
D + R+ A+ +L L G E+ G GCL PP+ R
Sbjct: 236 DLASPPREGAFAGASPVLRLRDVGT------------ERESGAGCLRSAPPR-AGDARQQ 282
Query: 122 PRRCLS-----QDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGK 176
+RC S + SRS S RS P+ G G + A+ A S R RG
Sbjct: 283 TQRCQSPSGGCEKGSRSVSGSRRSEPRPPAGLGD----ARAASPADTVSDDVSRRHRGCF 338
Query: 177 KIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGW 213
R R + GGG + R +G +RGW
Sbjct: 339 AGRARAPTGPRRRFANLGGG----DRTRPLGLLKRGW 371
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 40.4 bits (93), Expect = 0.001
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 93 QAAAAQEQSLGRGCLGKEPPKWESSTRSGP-------RRCLSQDASRSGSRVCRSRPQTR 145
+AAAA + G +PP P RR S +S S SR SR +R
Sbjct: 338 EAAAAAAAAAASGVTTGKPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSR 397
Query: 146 GGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIR---RRGQKAAAAGAKSCGGGGKKPQK 202
+ RRG +G +R RSR + R RR ++ + G + GGG + +
Sbjct: 398 SSS--RSRRGGGYYRSGRHARS---RSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHR 452
Query: 203 ARAVGARRRGWKKLRRRGKKAAAAG 227
ARR G+ RRR + + +G
Sbjct: 453 YSRSPARRGGYGP-RRRSRSRSHSG 476
Score = 32.0 bits (71), Expect = 0.46
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 18/129 (13%)
Query: 82 SHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSR 141
S RG RS + A ++ +S R + + S +RS RR S SR G R RS
Sbjct: 402 SRRGGGYYRSGRHARSRSRSWSRS---RSRSRRYSRSRSRGRRH-SGGGSRDGHRYSRS- 456
Query: 142 PQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQ 201
P RGG G PRR + ++S G RGG+ +R + ++S P
Sbjct: 457 PARRGGYG--PRRRSR-----SRSHSGDRYRRGGRGLRHH------SSSRSRSSWSLSPS 503
Query: 202 KARAVGARR 210
++R++ R
Sbjct: 504 RSRSLTRSR 512
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 40.0 bits (92), Expect = 0.002
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 90 RSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGG-- 147
RS A+E+ +GK PK S P R S+ SRS S+ R + RG
Sbjct: 266 RSKSKDQAEEKIQNNDNVGK--PKSRS-----PSRHKSKSKSRSRSQERRVEEEKRGSVS 318
Query: 148 GGKKPRRGQKAATAGAKSRGGG---VRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKAR 204
G+ + + + + ++S+GG RSR K +R+G+K + ++S K +++R
Sbjct: 319 RGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSR 378
Query: 205 AVGARRRGWKKLRRRGKK 222
G++R ++ KK
Sbjct: 379 KRGSKRDSKAGSSKKKKK 396
Score = 31.2 bits (69), Expect = 0.78
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 119 RSGPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKI 178
+ G RR S SRS SR SR ++R + R G + ++ +KSR RSR G +
Sbjct: 176 KPGSRRRRSYSRSRSHSR---SRSRSRHSRKSRSRSGS-SKSSHSKSRS---RSRSGSRS 228
Query: 179 RRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAA 224
R + + + + ++S + P K ++ +R K R + K A
Sbjct: 229 RSKSRSRSQSRSRSKKEKSRSPSKEKS-RSRSHSAGKSRSKSKDQA 273
Score = 30.0 bits (66), Expect = 1.7
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 9/120 (7%)
Query: 85 GQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQT 144
G+ + RS ++ +S R + + E R R SQ+ S R RSR ++
Sbjct: 284 GKPKSRSPSRHKSKSKSRSRS----QERRVEEEKRGSVSRGRSQEKSL---RQSRSRSRS 336
Query: 145 RGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAK--SCGGGGKKPQK 202
+GG + R K+ + SR + R + +++ G+K S G KK +K
Sbjct: 337 KGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKK 396
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 40.0 bits (92), Expect = 0.002
Identities = 43/152 (28%), Positives = 55/152 (36%), Gaps = 32/152 (21%)
Query: 89 RRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGGG 148
RRS +AA G C G P + + GP A S R ++ GGG
Sbjct: 108 RRSRRAAGP-----GLDCAGSAPAPSGAQSCGGP-------APASALRRPLTQWDASGGG 155
Query: 149 GKKPRRGQKAATAGAKSRGGGVRSRGGKKIR----------RRGQKAAAAGAKSCGGGGK 198
G+ G +A T G GG SR G + + R+G G S GG
Sbjct: 156 GRASHSGPRAGTPG-----GGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSG 210
Query: 199 KPQKARAVGARRRGWKKLRRRGKKAAAAGGEK 230
P RA+ R G G +A G EK
Sbjct: 211 TPPPPRALWNRHGG-----AAGARAQVRGSEK 237
Score = 29.3 bits (64), Expect = 3.0
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 133 SGSRVCRSRPQTRG----GGGKKPRRGQKAATA--GAKSRGGGVRSRGGKKIRRRGQKAA 186
SGS R RP+ G G + RR +A TA G +SR G + G A
Sbjct: 73 SGSLTTR-RPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAA-----GPGLDCAGSAPA 126
Query: 187 AAGAKSCGGGGKKPQKARAVGARRRGWK------KLRRRGKKAAAAGGEKA 231
+GA+SCGG P A A+ W + G +A GG ++
Sbjct: 127 PSGAQSCGG----PAPASALRRPLTQWDASGGGGRASHSGPRAGTPGGGRS 173
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 40.0 bits (92), Expect = 0.002
Identities = 43/163 (26%), Positives = 59/163 (36%), Gaps = 17/163 (10%)
Query: 74 PATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRS 133
P LL L+ G AAAA + C PP G RR + R
Sbjct: 54 PPPPLLFLAAPGTA------AAAAAAAAASSSCFSPGPPLEVKRLARGKRRAGGRQKRRR 107
Query: 134 GSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGG--------GVRSRGGKKIRRRGQKA 185
G R + + R +P Q+ GA S GG V S+ + + G A
Sbjct: 108 GPRAGQEAEKRRVFSLPQP---QQDGGGGASSGGGVTPLVEYEDVSSQSEQGLLLGGASA 164
Query: 186 AAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGG 228
A A + G GG A + G +RRG RR + ++ G
Sbjct: 165 ATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSG 207
Score = 27.7 bits (60), Expect = 8.7
Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 15/121 (12%)
Query: 94 AAAAQEQSLGRGCLGKEPPKWESSTRSGP---RRCLSQDASRSGSRVCRSRPQTRGGGGK 150
AA A + G G G P + R G RR S SG R R R
Sbjct: 164 AATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRR----- 218
Query: 151 KPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARR 210
R GQ+ + +KSR SR R + A + + S GG K + + R
Sbjct: 219 --RDGQRGGSEASKSR-----SRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSR 271
Query: 211 R 211
+
Sbjct: 272 K 272
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 40.0 bits (92), Expect = 0.002
Identities = 43/163 (26%), Positives = 59/163 (36%), Gaps = 17/163 (10%)
Query: 74 PATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRS 133
P LL L+ G AAAA + C PP G RR + R
Sbjct: 54 PPPPLLFLAAPGTA------AAAAAAAAASSSCFSPGPPLEVKRLARGKRRAGGRQKRRR 107
Query: 134 GSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGG--------GVRSRGGKKIRRRGQKA 185
G R + + R +P Q+ GA S GG V S+ + + G A
Sbjct: 108 GPRAGQEAEKRRVFSLPQP---QQDGGGGASSGGGVTPLVEYEDVSSQSEQGLLLGGASA 164
Query: 186 AAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGG 228
A A + G GG A + G +RRG RR + ++ G
Sbjct: 165 ATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSG 207
Score = 27.7 bits (60), Expect = 8.7
Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 15/121 (12%)
Query: 94 AAAAQEQSLGRGCLGKEPPKWESSTRSGP---RRCLSQDASRSGSRVCRSRPQTRGGGGK 150
AA A + G G G P + R G RR S SG R R R
Sbjct: 164 AATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRR----- 218
Query: 151 KPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARR 210
R GQ+ + +KSR SR R + A + + S GG K + + R
Sbjct: 219 --RDGQRGGSEASKSR-----SRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSR 271
Query: 211 R 211
+
Sbjct: 272 K 272
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 39.7 bits (91), Expect = 0.002
Identities = 43/152 (28%), Positives = 55/152 (36%), Gaps = 32/152 (21%)
Query: 89 RRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGGG 148
RRS +AA G C G P + + GP A S R ++ GGG
Sbjct: 108 RRSRRAAGP-----GLDCAGSAPAPSGAQSCGGP-------APASALRRPLTQWDASGGG 155
Query: 149 GKKPRRGQKAATAGAKSRGGGVRSRGGKKIR----------RRGQKAAAAGAKSCGGGGK 198
G+ G +A T GGG SR G + + R+G G S GG
Sbjct: 156 GRGSHSGPRAGTP-----GGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSG 210
Query: 199 KPQKARAVGARRRGWKKLRRRGKKAAAAGGEK 230
P RA+ R G G +A G EK
Sbjct: 211 TPPPPRALWNRHGG-----AAGARAQVRGSEK 237
Score = 28.1 bits (61), Expect = 6.6
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 133 SGSRVCRSRPQTRG----GGGKKPRRGQKAATA--GAKSRGGGVRSRGGKKIRRRGQKAA 186
SGS R RP+ G G + RR +A TA G +SR G + G A
Sbjct: 73 SGSLTTR-RPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAA-----GPGLDCAGSAPA 126
Query: 187 AAGAKSCGG 195
+GA+SCGG
Sbjct: 127 PSGAQSCGG 135
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 39.7 bits (91), Expect = 0.002
Identities = 43/152 (28%), Positives = 55/152 (36%), Gaps = 32/152 (21%)
Query: 89 RRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGGG 148
RRS +AA G C G P + + GP A S R ++ GGG
Sbjct: 108 RRSRRAAGP-----GLDCAGSAPAPSGAQSCGGP-------APASALRRPLTQWDASGGG 155
Query: 149 GKKPRRGQKAATAGAKSRGGGVRSRGGKKIR----------RRGQKAAAAGAKSCGGGGK 198
G+ G +A T GGG SR G + + R+G G S GG
Sbjct: 156 GRGSHSGPRAGTP-----GGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSG 210
Query: 199 KPQKARAVGARRRGWKKLRRRGKKAAAAGGEK 230
P RA+ R G G +A G EK
Sbjct: 211 TPPPPRALWNRHGG-----AAGARAQVRGSEK 237
Score = 28.1 bits (61), Expect = 6.6
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 133 SGSRVCRSRPQTRG----GGGKKPRRGQKAATA--GAKSRGGGVRSRGGKKIRRRGQKAA 186
SGS R RP+ G G + RR +A TA G +SR G + G A
Sbjct: 73 SGSLTTR-RPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAA-----GPGLDCAGSAPA 126
Query: 187 AAGAKSCGG 195
+GA+SCGG
Sbjct: 127 PSGAQSCGG 135
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/77 (36%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 145 RGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKAR 204
RGG G + RG + G + RGGG R RG R G G GGGG R
Sbjct: 15 RGGFGDRGGRGGRGGFGGGRGRGGGFRGRG----RGGGGGGGGGGGGGRGGGGFHSGGNR 70
Query: 205 AVGARRRGWKKLRRRGK 221
R RG K+ + GK
Sbjct: 71 ---GRGRGGKRGNQSGK 84
>gi|4885375 histone cluster 1, H1c [Homo sapiens]
Length = 213
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 140 SRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQK-AAAAGAKSCGGGGK 198
++P+ + GG KP++ AA K+ GG + KK ++ +K AAA K K
Sbjct: 116 AKPKVKKAGGTKPKKPVGAAKKPKKAAGGATPKKSAKKTPKKAKKPAAATVTKKVAKSPK 175
Query: 199 KPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA 231
K + A+ A + K ++ + K +KA
Sbjct: 176 KAKVAKPKKAAKSAAKAVKPKAAKPKVVKPKKA 208
>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
Length = 352
Score = 38.9 bits (89), Expect = 0.004
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 26/172 (15%)
Query: 84 RGQVQRRSMQAAAAQEQSLGRGCLGKEPPK--------------WESSTRSGPRRCLSQD 129
R +R +++ AA + RGC + P W T+ S+
Sbjct: 29 RACAERAALEVGAASADTGVRGCGARGPAPLLASAGGGRARDGTWGVRTKGSGAALPSRP 88
Query: 130 ASRSGSRVCRSRP-----QTRGG--GGKKPRRGQKAATAGAKSRGGG---VRSRGGKKIR 179
ASR+ R S P + RGG G + R A G++ R R RG +K +
Sbjct: 89 ASRAAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRK 148
Query: 180 RRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA 231
++ +K + + G+K + A GA R +K RRR + ++++ +
Sbjct: 149 KKSRKDTSRNCSASTSQGRK--ASTAPGAEERSKQKARRRTRSSSSSSSSSS 198
Score = 35.0 bits (79), Expect = 0.054
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 120 SGPRRCLSQDA-SRSGSRV-CRSRPQTRGGGGKKPRRGQKAATA---------GAK-SRG 167
SGP+ ++ A + GSR RSR ++RG G +K ++ + T+ G K S
Sbjct: 113 SGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTA 172
Query: 168 GGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARAV---GARRRGWKKLRRRGKK 222
G R +K RRR + ++++ + S + + G ++RG K +RR KK
Sbjct: 173 PGAEERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKK 230
Score = 28.5 bits (62), Expect = 5.1
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 139 RSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGK 198
R+ P GG ++ R +A A +R+ + G +A G + CG G
Sbjct: 3 RAGPAGEEGGAREGRLLPRAPGAWV------LRACAERAALEVGAASADTGVRGCGARGP 56
Query: 199 KPQKARAVGARRR-GWKKLRRRGKKAA 224
P A A G R R G +R +G AA
Sbjct: 57 APLLASAGGGRARDGTWGVRTKGSGAA 83
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 38.5 bits (88), Expect = 0.005
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 11/156 (7%)
Query: 82 SHRGQVQRRSM-------QAAAAQEQSLGRGCLGKEPPKWESSTR--SGPRRCLSQDASR 132
S RG+ R S Q + QSLG G G + S R SG S
Sbjct: 267 SSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHG 326
Query: 133 SGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAG-AK 191
SGS SR G G+ GQ + +G +S G G +GQ + +G A
Sbjct: 327 SGSSYSYSRGHYESGSGQTSGFGQHESGSG-QSSGYSKHGSGSGHSSSQGQHGSTSGQAS 385
Query: 192 SCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAG 227
S G G +++ + G + RG+ ++ +G
Sbjct: 386 SSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSG 421
Score = 37.4 bits (85), Expect = 0.011
Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 6/140 (4%)
Query: 93 QAAAAQEQSLGRGCLGKEPPKWESSTR----SGPRRCLSQDASRSGSRVCRSRPQTRGGG 148
Q + QSLG G G + S +R SG + S RSGS SR G
Sbjct: 985 QHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGPYESGS 1044
Query: 149 GKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAG-AKSCGGGGKKPQKARAVG 207
G G + + +G S G S G GQ + +G + SCG G ++ + G
Sbjct: 1045 GHSSGLGHRESRSGQSSGYGQHGSSSGHS-STHGQHGSTSGQSSSCGQHGASSGQSSSHG 1103
Query: 208 ARRRGWKKLRRRGKKAAAAG 227
G + G++ + +G
Sbjct: 1104 QHGSGSSQSSGYGRQGSGSG 1123
Score = 36.2 bits (82), Expect = 0.024
Identities = 37/140 (26%), Positives = 55/140 (39%), Gaps = 6/140 (4%)
Query: 93 QAAAAQEQSLGRGCLGKEPPKWESSTR----SGPRRCLSQDASRSGSRVCRSRPQTRGGG 148
Q + QSLG G G + S +R SG + S SGS SR G
Sbjct: 1925 QHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESGS 1984
Query: 149 GKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAG-AKSCGGGGKKPQKARAVG 207
G G + + +G S G S G GQ +A+G + SCG G ++ + G
Sbjct: 1985 GHSSGLGHRESRSGQSSGYGQHGSSSGHS-STHGQHGSASGQSSSCGQHGASSGQSSSHG 2043
Query: 208 ARRRGWKKLRRRGKKAAAAG 227
G + G++ + +G
Sbjct: 2044 QHGSGSSQSSGYGRQGSGSG 2063
Score = 35.0 bits (79), Expect = 0.054
Identities = 36/140 (25%), Positives = 54/140 (38%), Gaps = 6/140 (4%)
Query: 93 QAAAAQEQSLGRGCLGKEPPKWESSTR----SGPRRCLSQDASRSGSRVCRSRPQTRGGG 148
Q + QSLG G G + S +R SG + S SGS SR G
Sbjct: 2395 QHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGS 2454
Query: 149 GKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAG-AKSCGGGGKKPQKARAVG 207
G G + + +G S G S G GQ + +G + SCG G ++ + G
Sbjct: 2455 GHSSGLGHRESRSGQSSGYGQHGSSSGHS-STHGQHGSTSGQSSSCGQHGASSGQSSSHG 2513
Query: 208 ARRRGWKKLRRRGKKAAAAG 227
G + G++ + +G
Sbjct: 2514 QHGSGSSQSSGYGRQGSGSG 2533
Score = 33.9 bits (76), Expect = 0.12
Identities = 41/162 (25%), Positives = 60/162 (37%), Gaps = 16/162 (9%)
Query: 82 SHRGQVQRRSMQAAAA-QEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASR--SGSRVC 138
S GQ R Q ++A S G+ G S SG + S R SGSR
Sbjct: 496 SRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQS 555
Query: 139 RSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKK------------IRRRGQKAA 186
S G G+ RG + +G S G SR G+ GQ +
Sbjct: 556 SSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGS 615
Query: 187 AAG-AKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAG 227
+G + SCG G ++ + G G + R G++ + +G
Sbjct: 616 TSGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSG 657
Score = 28.9 bits (63), Expect = 3.9
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Query: 120 SGPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIR 179
S R+ S S SR R Q G G+ P GQ+ + +G +S G G +
Sbjct: 392 SSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSG-QSPSSGQHGTGFGRSS 450
Query: 180 RRGQKAAAAGAKSCGGGGKKPQKARAVGARRRG 212
G + +G S G G + + G + G
Sbjct: 451 SSGPYVSGSGYSS-GFGHHESSSEHSSGYTQHG 482
Score = 28.9 bits (63), Expect = 3.9
Identities = 30/118 (25%), Positives = 40/118 (33%), Gaps = 6/118 (5%)
Query: 93 QAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASR--SGSRVCRSRPQTRGGGGK 150
Q + QS G G + SS + GP S S S S Q G G
Sbjct: 2070 QRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGH 2129
Query: 151 KPRRGQKAATAGAKSRGGGVRSRGGKKIR----RRGQKAAAAGAKSCGGGGKKPQKAR 204
GQ + +G SRG S G R G + ++ + G G P + R
Sbjct: 2130 SSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGR 2187
Score = 28.1 bits (61), Expect = 6.6
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 9/119 (7%)
Query: 85 GQVQRRSMQAAAAQEQSLGRGC---LGKEPPKWESSTRSGPRRCLSQDASR-----SGSR 136
G + S Q+++ + G G G+ + S+R S+ +SR SGSR
Sbjct: 1638 GHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSR 1697
Query: 137 VCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGG 195
+ G G+ P RG+ + G S G S G+ RG + +G S G
Sbjct: 1698 QSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRS-SSRGPYESRSGHSSVFG 1755
Score = 28.1 bits (61), Expect = 6.6
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 120 SGPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGG 175
SG R+ SGS SR + G G GQ + +G S G SR G
Sbjct: 2164 SGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSG 2219
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 38.5 bits (88), Expect = 0.005
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 146 GGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQKARA 205
G GG R G ++AG GGG GG + RRG+ G ++ R
Sbjct: 158 GAGGGAERGGSGRSSAGGGGGGGG---GGGGRGSRRGRGGGERGGPRAQAVRRRLSALRG 214
Query: 206 VGARRRGWKKLRRRGKKAAAAGGEKA 231
G RRR K+LRR + + AA E+A
Sbjct: 215 RGRRRR-LKRLRRAQETSGAAALERA 239
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 38.5 bits (88), Expect = 0.005
Identities = 44/148 (29%), Positives = 58/148 (39%), Gaps = 13/148 (8%)
Query: 94 AAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASR-SGSRVCRSR-------PQTR 145
A +++ G G + P + S++ S R + AS R+C R P R
Sbjct: 102 AQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVR 161
Query: 146 G-GGGKKPRR--GQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQK 202
G GGG PR G AA A+ GG RSR R A A + G G +
Sbjct: 162 GPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM 221
Query: 203 ARAVGARRRGWKKLRRRGKKAAAAGGEK 230
R +GA R R RG A A G +
Sbjct: 222 RRRLGAGER--PAPRPRGPPRAPARGAR 247
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 38.5 bits (88), Expect = 0.005
Identities = 44/148 (29%), Positives = 58/148 (39%), Gaps = 13/148 (8%)
Query: 94 AAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASR-SGSRVCRSR-------PQTR 145
A +++ G G + P + S++ S R + AS R+C R P R
Sbjct: 102 AQGSRDVPAGPGFPPRLPRPFTSASFSNQTRLRRRSASALPAPRLCPQRASPGCSSPGVR 161
Query: 146 G-GGGKKPRR--GQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCGGGGKKPQK 202
G GGG PR G AA A+ GG RSR R A A + G G +
Sbjct: 162 GPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM 221
Query: 203 ARAVGARRRGWKKLRRRGKKAAAAGGEK 230
R +GA R R RG A A G +
Sbjct: 222 RRRLGAGER--PAPRPRGPPRAPARGAR 247
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 38.5 bits (88), Expect = 0.005
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 18/81 (22%)
Query: 145 RGGGGKKPRRGQK----------AATAGAKSRGGGVRSRGGKKIRRRGQKAAAAGAKSCG 194
RGG G++P RG+ AA A A+ GGG GG + R RG+ GA+
Sbjct: 8 RGGRGRRPGRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGR-RGRGRGRGFRGARGGR 66
Query: 195 GGGKKPQKARAVGARRR--GW 213
GGG P+ G+RR GW
Sbjct: 67 GGGGAPR-----GSRREPGGW 82
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 37.7 bits (86), Expect = 0.008
Identities = 39/146 (26%), Positives = 50/146 (34%), Gaps = 13/146 (8%)
Query: 72 VTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDAS 131
+T A + +R R+ +AAAA + G GK K +SS + S D
Sbjct: 137 LTEARVQVWFQNRRAKFRKQERAAAAAAAAAKNGSSGK---KSDSSRDDESKEAKSTDPD 193
Query: 132 RSGSRVCRSRPQ----TRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGKKIRRRGQKAAA 187
+G P GGGG P AG GG G AAA
Sbjct: 194 STGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAA 253
Query: 188 AGAKSCGGGGKKPQKARAVGARRRGW 213
A A + GG A G +GW
Sbjct: 254 AAAAAAAGG------LAAAGGPGQGW 273
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,684,723
Number of Sequences: 37866
Number of extensions: 544249
Number of successful extensions: 4302
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 345
Number of HSP's that attempted gapping in prelim test: 3025
Number of HSP's gapped (non-prelim): 1019
length of query: 231
length of database: 18,247,518
effective HSP length: 99
effective length of query: 132
effective length of database: 14,498,784
effective search space: 1913839488
effective search space used: 1913839488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.