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Search of human proteins with 239752497
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752497 PREDICTED: similar to family with sequence
similarity 27, member D1, partial [Homo sapiens]
(122 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752497 PREDICTED: similar to family with sequence similari... 261 1e-70
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 222 6e-59
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 218 9e-58
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 194 2e-50
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 192 4e-50
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 192 5e-50
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 183 2e-47
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ... 183 2e-47
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ... 183 2e-47
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 183 2e-47
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 179 6e-46
gi|169184221 PREDICTED: family with sequence similarity 27, memb... 178 1e-45
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 172 7e-44
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 172 7e-44
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 172 7e-44
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 168 1e-42
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 168 1e-42
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 168 1e-42
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 155 5e-39
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ... 52 1e-07
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] 41 3e-04
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 37 0.005
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 35 0.014
gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens] 35 0.014
gi|153945755 zinc finger protein 608 [Homo sapiens] 35 0.018
gi|169210342 PREDICTED: hypothetical protein [Homo sapiens] 34 0.031
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 33 0.053
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s... 33 0.069
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa... 33 0.069
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 32 0.090
>gi|239752497 PREDICTED: similar to family with sequence similarity
27, member D1, partial [Homo sapiens]
Length = 122
Score = 261 bits (666), Expect = 1e-70
Identities = 122/122 (100%), Positives = 122/122 (100%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW
Sbjct: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL
Sbjct: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
Query: 121 KH 122
KH
Sbjct: 121 KH 122
>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 222 bits (565), Expect = 6e-59
Identities = 109/122 (89%), Positives = 111/122 (90%), Gaps = 2/122 (1%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMRFQLLRE+RISSRGPGF PKAD PRRKRLTAGLMTQ E +KEAHQRQAAMRQTALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
RTGHI PKTHTHTGIHTQTHRERERNTQRLRDRERRE RHTHTHTH THTQ HTAEAL
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTH--THTQRHTAEAL 118
Query: 121 KH 122
KH
Sbjct: 119 KH 120
>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 218 bits (555), Expect = 9e-58
Identities = 107/122 (87%), Positives = 110/122 (90%), Gaps = 2/122 (1%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMRFQLLRE+RISSRGPGF PKAD PRRKRLTAGLMTQ E +KEAHQRQAAMRQTALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
RTGHI PKTHTHTGIHTQTHRERERNTQRLRDRERRE R HTH HT+THTQ HTAEAL
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRETGR--HTHRHTQTHTQRHTAEAL 118
Query: 121 KH 122
KH
Sbjct: 119 KH 120
>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
sapiens]
Length = 125
Score = 194 bits (492), Expect = 2e-50
Identities = 95/122 (77%), Positives = 103/122 (84%), Gaps = 3/122 (2%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMR QLLR++RISSRGPG H KAD ++KRLT GLMTQAE +KEA QRQAAMR+TALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
TGH+ PKTHTHTG+HTQTHRERERNTQRLRDRERRE RHTH HT THTQ HT EAL
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHT---THTQRHTEEAL 117
Query: 121 KH 122
KH
Sbjct: 118 KH 119
>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
Length = 124
Score = 192 bits (489), Expect = 4e-50
Identities = 95/122 (77%), Positives = 103/122 (84%), Gaps = 4/122 (3%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMR QLLR++RISSRGPG H KAD ++KRLT GLMTQAE +KEA QRQAAMR+TALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
TGH+ PKTHTHTG+HTQTHRERERNTQRLRDRERRE R HTHTETHTQ HT EAL
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGR----HTHTETHTQRHTEEAL 116
Query: 121 KH 122
KH
Sbjct: 117 KH 118
>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
Length = 122
Score = 192 bits (488), Expect = 5e-50
Identities = 94/122 (77%), Positives = 102/122 (83%), Gaps = 6/122 (4%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMR QLLR++RISSRGPG H KAD ++KRLT GLMTQAE +KEA QRQAAMR+TALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
TGH+ PKTHTHTG+HTQTHRERERNTQRLRDRERRE HTHTETHTQ HT EAL
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRE------NHTHTETHTQRHTEEAL 114
Query: 121 KH 122
KH
Sbjct: 115 KH 116
>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 131
Score = 183 bits (465), Expect = 2e-47
Identities = 89/115 (77%), Positives = 96/115 (83%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMRFQLLR++RISSRGPG H KAD RRK+LT GLMTQAE +KEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSH 115
TGHI PKTHTH G H QTHR+RERNTQRLRDRERRE RHTHTHT T THT +H
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH 115
>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
sapiens]
Length = 131
Score = 183 bits (465), Expect = 2e-47
Identities = 89/115 (77%), Positives = 96/115 (83%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMRFQLLR++RISSRGPG H KAD RRK+LT GLMTQAE +KEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSH 115
TGHI PKTHTH G H QTHR+RERNTQRLRDRERRE RHTHTHT T THT +H
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH 115
>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
sapiens]
Length = 174
Score = 183 bits (465), Expect = 2e-47
Identities = 91/118 (77%), Positives = 97/118 (82%), Gaps = 2/118 (1%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMRFQLLR++RISSRGPG H KAD RRK+LT GLMTQAE +KEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHT--HTETHTQSHT 116
TGHI PKTHTH G H QTHR+RERNTQRLRDRERRE RHTHTHT HT THT HT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118
>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 174
Score = 183 bits (465), Expect = 2e-47
Identities = 91/118 (77%), Positives = 97/118 (82%), Gaps = 2/118 (1%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMRFQLLR++RISSRGPG H KAD RRK+LT GLMTQAE +KEAHQRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHT--HTETHTQSHT 116
TGHI PKTHTH G H QTHR+RERNTQRLRDRERRE RHTHTHT HT THT HT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118
>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 113
Score = 179 bits (453), Expect = 6e-46
Identities = 85/107 (79%), Positives = 93/107 (86%)
Query: 5 FQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALWRTGH 64
FQLLR++RISSRGPG HTPKA+ RRK LT GLMTQAE +K+AHQRQAAMR+TALW TGH
Sbjct: 4 FQLLRDRRISSRGPGLHTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
Query: 65 IWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETH 111
I P+THTHTG HTQT RERERNTQRLRDRERRE RHTHT+TH TH
Sbjct: 64 IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
>gi|169184221 PREDICTED: family with sequence similarity 27, member
E3 [Homo sapiens]
Length = 113
Score = 178 bits (451), Expect = 1e-45
Identities = 85/107 (79%), Positives = 93/107 (86%)
Query: 5 FQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALWRTGH 64
FQLLR++RISSRGPG HTPKA+ RRK LT GLMTQAE +K+AHQRQAAMR+TALW TGH
Sbjct: 4 FQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGH 63
Query: 65 IWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETH 111
I P+THTHTG HTQT RERERNTQRLRDRERRE RHTHT+TH TH
Sbjct: 64 IRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTH 110
>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 122
Score = 172 bits (435), Expect = 7e-44
Identities = 88/122 (72%), Positives = 95/122 (77%), Gaps = 6/122 (4%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MG R QLL+++RI SRGPGFH KAD RKRLT GLMTQAE +KE QRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
TGHI PKTH HTG HTQTHRE ERNTQRLRDRERRE RHTH T T+ HTAEAL
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTH------TQTKGHTAEAL 114
Query: 121 KH 122
KH
Sbjct: 115 KH 116
>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
sapiens]
Length = 122
Score = 172 bits (435), Expect = 7e-44
Identities = 88/122 (72%), Positives = 95/122 (77%), Gaps = 6/122 (4%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MG R QLL+++RI SRGPGFH KAD RKRLT GLMTQAE +KE QRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
TGHI PKTH HTG HTQTHRE ERNTQRLRDRERRE RHTH T T+ HTAEAL
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTH------TQTKGHTAEAL 114
Query: 121 KH 122
KH
Sbjct: 115 KH 116
>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
Length = 122
Score = 172 bits (435), Expect = 7e-44
Identities = 88/122 (72%), Positives = 95/122 (77%), Gaps = 6/122 (4%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MG R QLL+++RI SRGPGFH KAD RKRLT GLMTQAE +KE QRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
TGHI PKTH HTG HTQTHRE ERNTQRLRDRERRE RHTH T T+ HTAEAL
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTH------TQTKGHTAEAL 114
Query: 121 KH 122
KH
Sbjct: 115 KH 116
>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 168 bits (425), Expect = 1e-42
Identities = 87/122 (71%), Positives = 96/122 (78%), Gaps = 2/122 (1%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGM QLLR++R+SSRGPG H PK + +RK LTAG TQAE +K AHQRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
TGHI PKTH HTG HTQT RERERNTQRLRDRERRE RHT T+T+ THTQSHTA A
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTY--THTQSHTAVAQ 118
Query: 121 KH 122
KH
Sbjct: 119 KH 120
>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 168 bits (425), Expect = 1e-42
Identities = 87/122 (71%), Positives = 96/122 (78%), Gaps = 2/122 (1%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGM QLLR++R+SSRGPG H PK + +RK LTAG TQAE +K AHQRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
TGHI PKTH HTG HTQT RERERNTQRLRDRERRE RHT T+T+ THTQSHTA A
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTY--THTQSHTAVAQ 118
Query: 121 KH 122
KH
Sbjct: 119 KH 120
>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 168 bits (425), Expect = 1e-42
Identities = 87/122 (71%), Positives = 96/122 (78%), Gaps = 2/122 (1%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGM QLLR++R+SSRGPG H PK + +RK LTAG TQAE +K AHQRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
TGHI PKTH HTG HTQT RERERNTQRLRDRERRE RHT T+T+ THTQSHTA A
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTY--THTQSHTAVAQ 118
Query: 121 KH 122
KH
Sbjct: 119 KH 120
>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 134
Score = 155 bits (393), Expect = 5e-39
Identities = 85/134 (63%), Positives = 95/134 (70%), Gaps = 18/134 (13%)
Query: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
MGMRFQLLR++ ISS GPG HTPKA RR+RLT G TQAE +KEAHQRQA MR+ ALW
Sbjct: 1 MGMRFQLLRDRCISSHGPGLHTPKAGPRRRRRLTTGCTTQAETQKEAHQRQADMREIALW 60
Query: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHT------H------T 108
RTG I P+T+ QT RERERNTQR RD+ER+E RHTHTHT H T
Sbjct: 61 RTGRIRPETYM------QTDRERERNTQRPRDKERKENGRHTHTHTLTHTHSHTHTHTHT 114
Query: 109 ETHTQSHTAEALKH 122
+THTQ H AEALKH
Sbjct: 115 QTHTQDHRAEALKH 128
>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
sapiens]
Length = 228
Score = 51.6 bits (122), Expect = 1e-07
Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 22 TPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAM-RQTALWRTGHIWPK-THTHTGIHTQT 79
TPK + P KRL G TQAE EA Q++ R A G P+ THT T +
Sbjct: 10 TPKPE-PPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQTDRDRKR 68
Query: 80 HRERERNTQR-LRDRERREWERHT--------HTHTHTETHTQSHT 116
R +ER + R+RER +R T HTHT+TH +HT
Sbjct: 69 GRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 40.8 bits (94), Expect = 3e-04
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 69 THTHTGIHTQTHRERERNTQRLRDRERREW 98
THTHT HT+ RE ER T+R R+RE R+W
Sbjct: 74 THTHTHTHTENERESERETERERERE-RDW 102
Score = 28.5 bits (62), Expect = 1.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 101 HTHTHTHTETHTQS 114
HTHTHTHTE +S
Sbjct: 75 HTHTHTHTENERES 88
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 36.6 bits (83), Expect = 0.005
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 11 QRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQT--ALWRTGHIWPK 68
+R R HT + D R+K+ + + E+E + RQT R +
Sbjct: 91 ERDKERETDRHT-ETDRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAE 149
Query: 69 THTHTGIHTQT---HRERERNTQRLRDRERREWERHTHTHTHTETHTQS 114
TG +T HRERER +R R+R+R ER HT E ++
Sbjct: 150 RERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERERQRET 198
Score = 34.3 bits (77), Expect = 0.024
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 39 TQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREW 98
T E E++ + + RQ R +T HT + +++ER +R+RDRER +
Sbjct: 68 TDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDREREKQ 127
Query: 99 -----ERHTHTHTHTETHTQS 114
ER T T E Q+
Sbjct: 128 KEMGRERQTDRETDRERERQA 148
Score = 29.6 bits (65), Expect = 0.58
Identities = 30/100 (30%), Positives = 36/100 (36%), Gaps = 19/100 (19%)
Query: 34 TAGLMTQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQRLRDR 93
T G T E E QR+ R+T R KT R+RERN +R RDR
Sbjct: 5 TEGRHTHTETETMDRQRERR-RETDRERDRAKESKTEDRHS-ERDRQRDRERNRERDRDR 62
Query: 94 ER-----------------REWERHTHTHTHTETHTQSHT 116
ER R+ +R T E T HT
Sbjct: 63 EREKQTDREGERQRERERDRDRQRETERERDKERETDRHT 102
Score = 29.6 bits (65), Expect = 0.58
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 76 HTQTHRERERNTQRLRDRER 95
HT RER+R T R RDR+R
Sbjct: 187 HTDMERERQRETDRKRDRQR 206
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 35.0 bits (79), Expect = 0.014
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 20/75 (26%)
Query: 39 TQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREW 98
T+ E EK+A + +A+ R+T + +ERER R RDR+RR+
Sbjct: 238 TEREREKQAERERASERET--------------------ERDKERERERDRDRDRDRRQK 277
Query: 99 ERHTHTHTHTETHTQ 113
ER T + T+
Sbjct: 278 ERERQTDRKRQRRTE 292
Score = 34.7 bits (78), Expect = 0.018
Identities = 22/90 (24%), Positives = 36/90 (40%)
Query: 24 KADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRER 83
K + R + + E ++E + + RQT + R + + RER
Sbjct: 316 KRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERER 375
Query: 84 ERNTQRLRDRERREWERHTHTHTHTETHTQ 113
ER+ Q R+RE RE +R E T+
Sbjct: 376 ERDRQSAREREERERDRDRDRQKERERQTE 405
Score = 33.1 bits (74), Expect = 0.053
Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 27/101 (26%)
Query: 30 RKRLTAGLMTQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQR 89
R R T G Q E E++ + RQT R T + Q RERE+N Q
Sbjct: 139 RDRQTDG---QRERERQRDAEKERERQTDRER--------QRQTERNRQKEREREKNRQE 187
Query: 90 LRDRER----------------REWERHTHTHTHTETHTQS 114
R+RER RE ER T T TE Q+
Sbjct: 188 RRERERQREKENKTEDRHSERGRERERERETETETERKRQT 228
Score = 31.2 bits (69), Expect = 0.20
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 12/99 (12%)
Query: 24 KADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIH------T 77
+ D R+++ + E EK +R+ RQ + H+ G T
Sbjct: 162 QTDRERQRQTERNRQKEREREKNRQERRERERQR---EKENKTEDRHSERGRERERERET 218
Query: 78 QTHRERERNTQRLRDRER---REWERHTHTHTHTETHTQ 113
+T ER+R T R RDR+R RE E+ +E T+
Sbjct: 219 ETETERKRQTDRERDRQRKTEREREKQAERERASERETE 257
Score = 30.4 bits (67), Expect = 0.34
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 40 QAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHR----ERERNTQRLRDRER 95
Q E E+ +RQ R+T R H H + R ERER T R RDR+
Sbjct: 59 QKERERRREKRQTE-RETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQ- 116
Query: 96 REWERHTHTHTHTETHTQ 113
RE ER+ ET +
Sbjct: 117 REKERNRQKERERETERE 134
Score = 30.4 bits (67), Expect = 0.34
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 78 QTHRERERNTQRLRDRER-REWERHTHTHTHTE 109
+ RERERN +R R+RER RE ER T E
Sbjct: 306 ERERERERNRKRERERERERERERQRETERDRE 338
Score = 26.9 bits (58), Expect = 3.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 81 RERERNTQRLRDRERREWERHT 102
RER R +R R RE+R+ ER T
Sbjct: 54 RERNRQKERERRREKRQTERET 75
Score = 26.6 bits (57), Expect = 4.9
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 30 RKRLTAGLMTQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQR 89
R R +A + E +++ +++ RQT R G T+ RERE++ +
Sbjct: 377 RDRQSAREREERERDRDRDRQKERERQTEKDRDGQR----------ETEKQREREKDRES 426
Query: 90 LRDRER-REWERHTHTHTHTETHTQSHTAEALK 121
R RER RE E+ E T K
Sbjct: 427 ERGRERGREREKQKGRERDRERQTDRQAGRQRK 459
Score = 26.2 bits (56), Expect = 6.5
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 42 EMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRER-----R 96
+ EKE ++++ R+T R G G QT +RER QR ++ER R
Sbjct: 116 QREKERNRQKERERETE--REGE--------RGRDRQTDGQRERERQRDAEKERERQTDR 165
Query: 97 EWERHTHTHTHTETHTQSHTAE 118
E +R T + E + + E
Sbjct: 166 ERQRQTERNRQKEREREKNRQE 187
>gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens]
Length = 719
Score = 35.0 bits (79), Expect = 0.014
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 85 RNTQRLRDRERREWERHTHTHTHTETHTQSH 115
R+ + + ER ++THTHTHT THT H
Sbjct: 674 RSVSQETEPEREAGLQNTHTHTHTHTHTHDH 704
Score = 33.9 bits (76), Expect = 0.031
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Query: 68 KTHT-HTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSH 115
KTH G+ +E E +RE HTHTHTHT TH H
Sbjct: 664 KTHQLENGLSRSVSQETEP------EREAGLQNTHTHTHTHTHTHDHQH 706
Score = 26.9 bits (58), Expect = 3.8
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 6/40 (15%)
Query: 75 IHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQS 114
+ +T ERE Q HTHTHTH H S
Sbjct: 676 VSQETEPEREAGLQNTHTHT------HTHTHTHDHQHILS 709
>gi|153945755 zinc finger protein 608 [Homo sapiens]
Length = 1512
Score = 34.7 bits (78), Expect = 0.018
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 82 ERERNTQRLRDRERREWERHTHTHTHT 108
ERER +R RDR +RH HTH HT
Sbjct: 1440 EREREAERERDRHSPFGQRHLHTHHHT 1466
>gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 136
Score = 33.9 bits (76), Expect = 0.031
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 69 THTHTGIHTQTHRER-ERNTQRLRDRERREW 98
THTHT HT+ RE ER +R R+RE R+W
Sbjct: 74 THTHTHTHTENERESGERQRERERERE-RDW 103
Score = 28.5 bits (62), Expect = 1.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 101 HTHTHTHTETHTQS 114
HTHTHTHTE +S
Sbjct: 75 HTHTHTHTENERES 88
Score = 26.2 bits (56), Expect = 6.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 102 THTHTHTETHTQSHTAE 118
THTHTHT T + + E
Sbjct: 74 THTHTHTHTENERESGE 90
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 33.1 bits (74), Expect = 0.053
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 42 EMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRER---REW 98
E E++ + + RQT R G +T T + +++ER T+R RDR+R +E
Sbjct: 142 ERERDRDREKERERQTEKDRDGQ--RETETERERDREREKQKERETERDRDRQRDTEKER 199
Query: 99 ERHTHTHTHTETHTQS 114
ER T + TQ+
Sbjct: 200 ERQTDRERDRQRKTQT 215
Score = 31.2 bits (69), Expect = 0.20
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 82 ERERNTQRLRDRERREWERHTHTHTHTETHTQ 113
E+ER+ R RDRERR E+ T+ + E T+
Sbjct: 89 EKERDRDRKRDRERRRKEKETNRNRDREKQTE 120
Score = 29.3 bits (64), Expect = 0.76
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 39 TQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERRE 97
T+ E E++ + + R+T R + T + R+R+R +R R+R+R+E
Sbjct: 195 TEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKE 253
Score = 27.7 bits (60), Expect = 2.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 77 TQTHRERERNTQRLRDRER---REWERHTHTHTHTETHTQ 113
T+ R+RER Q+ R+RER RE ER E T+
Sbjct: 119 TEIERDREREKQKGRERERDRGRERERDRDREKERERQTE 158
Score = 27.7 bits (60), Expect = 2.2
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 39 TQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRER-RE 97
T+ E E++ + + R+T R T T R+R+R TQ R RE RE
Sbjct: 167 TETERERDREREKQKERETERDRDRQ--RDTEKERERQTDRERDRQRKTQTERQRETDRE 224
Query: 98 WERHT 102
ER T
Sbjct: 225 GERET 229
>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
sapiens]
Length = 1235
Score = 32.7 bits (73), Expect = 0.069
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 95 RREWERHTHTHTHTETHTQSHTAEALKH 122
R E+ +H H H HT HT HT H
Sbjct: 521 RTEFHQHQHQHQHTHQHTHQHTFTPFPH 548
Score = 26.6 bits (57), Expect = 4.9
Identities = 25/108 (23%), Positives = 33/108 (30%), Gaps = 27/108 (25%)
Query: 15 SRGPGFHTPKADLPRRKRLTAG-LMTQAEMEKEAHQRQAAMRQT---------ALWRTGH 64
S P P LP LT+G L + Q +RQ + R
Sbjct: 454 SHHPNMFAPPTALPPPPPLTSGSLQVAGHPAGSTYSEQDILRQELNTRFLASQSADRGAS 513
Query: 65 IWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHT 112
+ P + T H H+ + HTH HTH T T
Sbjct: 514 LGPPPYLRTEFHQHQHQHQ-----------------HTHQHTHQHTFT 544
>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
sapiens]
Length = 1259
Score = 32.7 bits (73), Expect = 0.069
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 95 RREWERHTHTHTHTETHTQSHTAEALKH 122
R E+ +H H H HT HT HT H
Sbjct: 521 RTEFHQHQHQHQHTHQHTHQHTFTPFPH 548
Score = 26.6 bits (57), Expect = 4.9
Identities = 25/108 (23%), Positives = 33/108 (30%), Gaps = 27/108 (25%)
Query: 15 SRGPGFHTPKADLPRRKRLTAG-LMTQAEMEKEAHQRQAAMRQT---------ALWRTGH 64
S P P LP LT+G L + Q +RQ + R
Sbjct: 454 SHHPNMFAPPTALPPPPPLTSGSLQVAGHPAGSTYSEQDILRQELNTRFLASQSADRGAS 513
Query: 65 IWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHT 112
+ P + T H H+ + HTH HTH T T
Sbjct: 514 LGPPPYLRTEFHQHQHQHQ-----------------HTHQHTHQHTFT 544
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 32.3 bits (72), Expect = 0.090
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 29 RRKRLTAGLMTQAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQ 88
R++ G T+ E +++ + R+ + H QT RE+ER Q
Sbjct: 7 RKRETDRGKETERERDRQRERENQTERENR-------HRQRDRHRERDRQTDREKERERQ 59
Query: 89 RLRDRERREWERHTHTHTHTETHTQ 113
+ RDR+R+ ER T T + Q
Sbjct: 60 KERDRQRQR-ERETERETERQRERQ 83
Score = 28.5 bits (62), Expect = 1.3
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 78 QTHRERERNTQRLRDRER-REWERHTHTHTHTETHTQSHTAEALK 121
QT RER+R +R R RER R+ +R T E + E K
Sbjct: 125 QTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKK 169
Score = 28.5 bits (62), Expect = 1.3
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 77 TQTHRERERNTQRLRDRER-REWERHTHT 104
T+ R+RER QR R+RER R+ ER T
Sbjct: 126 TERERDRERERQRQRERERQRQRERKRET 154
Score = 28.1 bits (61), Expect = 1.7
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 40 QAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRER---- 95
Q E +++ +++ R+ R +T + + + RER++ T+R RDRER
Sbjct: 79 QRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQR 138
Query: 96 -REWERHTHTHTHTET 110
RE ER ET
Sbjct: 139 QRERERQRQRERKRET 154
Score = 27.3 bits (59), Expect = 2.9
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 40 QAEMEKEAHQRQAAMRQTALWRTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRER-REW 98
Q + EKE +++ RQ R +T T + R+RER Q R+R++ R+
Sbjct: 49 QTDREKERERQKERDRQRQRER------ETERETERQRERQRQRERKRQTDRERDKDRDR 102
Query: 99 ERHTHTHTHTE 109
ER T + E
Sbjct: 103 ERKRETDRNRE 113
Score = 26.2 bits (56), Expect = 6.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 82 ERERNTQRLRDRERREWERHTHTHTHTETHTQS 114
ERER+ QR R+ + RH H E Q+
Sbjct: 18 ERERDRQRERENQTERENRHRQRDRHRERDRQT 50
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.126 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,072,825
Number of Sequences: 37866
Number of extensions: 199345
Number of successful extensions: 2292
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1273
Number of HSP's gapped (non-prelim): 589
length of query: 122
length of database: 18,247,518
effective HSP length: 89
effective length of query: 33
effective length of database: 14,877,444
effective search space: 490955652
effective search space used: 490955652
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.