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Search of human proteins with 239752116
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo
sapiens]
(571 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757609 PREDICTED: hypothetical protein [Homo sapiens] 1202 0.0
gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo ... 1202 0.0
gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo ... 1202 0.0
gi|21040324 B-cell lymphoma 6 protein isoform 1 [Homo sapiens] 45 2e-04
gi|197927147 B-cell lymphoma 6 protein isoform 2 [Homo sapiens] 45 2e-04
gi|195927002 B-cell lymphoma 6 protein isoform 1 [Homo sapiens] 45 2e-04
gi|4758216 dishevelled 2 [Homo sapiens] 43 7e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 40 0.004
gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo s... 40 0.006
gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo s... 40 0.006
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 40 0.006
gi|126090909 engrailed homeobox 1 [Homo sapiens] 39 0.010
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 39 0.013
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 39 0.013
gi|157266269 GATA like protein-1 [Homo sapiens] 39 0.013
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 39 0.013
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 39 0.017
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 39 0.017
gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens] 38 0.022
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens] 38 0.029
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens] 38 0.029
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 37 0.037
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 37 0.037
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 37 0.049
gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] 37 0.064
gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] 37 0.064
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens] 36 0.083
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens] 36 0.083
gi|56090548 insulin-like growth factor binding protein-like 1 [H... 36 0.083
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 36 0.083
>gi|239757609 PREDICTED: hypothetical protein [Homo sapiens]
Length = 571
Score = 1202 bits (3109), Expect = 0.0
Identities = 571/571 (100%), Positives = 571/571 (100%)
Query: 1 MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60
MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG
Sbjct: 1 MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60
Query: 61 KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120
KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH
Sbjct: 61 KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120
Query: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180
IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR
Sbjct: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180
Query: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240
KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA
Sbjct: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240
Query: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300
ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV
Sbjct: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300
Query: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360
LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ
Sbjct: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360
Query: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420
TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG
Sbjct: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420
Query: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480
PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL
Sbjct: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480
Query: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540
RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS
Sbjct: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540
Query: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571
AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC
Sbjct: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571
>gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo
sapiens]
Length = 571
Score = 1202 bits (3109), Expect = 0.0
Identities = 571/571 (100%), Positives = 571/571 (100%)
Query: 1 MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60
MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG
Sbjct: 1 MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60
Query: 61 KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120
KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH
Sbjct: 61 KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120
Query: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180
IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR
Sbjct: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180
Query: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240
KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA
Sbjct: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240
Query: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300
ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV
Sbjct: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300
Query: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360
LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ
Sbjct: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360
Query: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420
TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG
Sbjct: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420
Query: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480
PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL
Sbjct: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480
Query: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540
RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS
Sbjct: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540
Query: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571
AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC
Sbjct: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571
>gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo
sapiens]
Length = 571
Score = 1202 bits (3109), Expect = 0.0
Identities = 571/571 (100%), Positives = 571/571 (100%)
Query: 1 MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60
MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG
Sbjct: 1 MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60
Query: 61 KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120
KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH
Sbjct: 61 KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120
Query: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180
IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR
Sbjct: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180
Query: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240
KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA
Sbjct: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240
Query: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300
ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV
Sbjct: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300
Query: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360
LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ
Sbjct: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360
Query: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420
TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG
Sbjct: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420
Query: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480
PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL
Sbjct: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480
Query: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540
RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS
Sbjct: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540
Query: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571
AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC
Sbjct: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571
>gi|21040324 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]
Length = 706
Score = 45.1 bits (105), Expect = 2e-04
Identities = 64/248 (25%), Positives = 89/248 (35%), Gaps = 24/248 (9%)
Query: 38 ETLSSELPWGCHPSTCSLLTARGKSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLP 97
ET+ E H S L S ++ K S EE + E + P
Sbjct: 263 ETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPNAP 322
Query: 98 GNEGGRGAPVGGSRTSCVTTTWHIPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAA 157
N G +P ++ C + P + CIL QASGS + P A
Sbjct: 323 LNRKGLVSPQSPQKSDCQPNS-------PTESCSSKNACIL--QASGSPPAKSPTDPKAC 373
Query: 158 ALLAQRLIRKDPLA--ALAPSPQQRKEHQF-PMSHTLTPAAQPPRGPE-----KPTSVHA 209
+ I + L A P+Q + + P ++T PA QPP PE PT + A
Sbjct: 374 NWKKYKFIVLNSLNQNAKPEGPEQAELGRLSPRAYTAPPACQPPMEPENLDLQSPTKLSA 433
Query: 210 --EEALRP--SRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCL 265
E++ P SRL+ V+ G RS + P P + SPQ CL
Sbjct: 434 SGEDSTIPQASRLNNIVNRSMTGSPRSSSESHSPLYMHPPKCTSCGSQ---SPQHAEMCL 490
Query: 266 ETGGKGAP 273
T G P
Sbjct: 491 HTAGPTFP 498
>gi|197927147 B-cell lymphoma 6 protein isoform 2 [Homo sapiens]
Length = 650
Score = 45.1 bits (105), Expect = 2e-04
Identities = 64/248 (25%), Positives = 89/248 (35%), Gaps = 24/248 (9%)
Query: 38 ETLSSELPWGCHPSTCSLLTARGKSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLP 97
ET+ E H S L S ++ K S EE + E + P
Sbjct: 263 ETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPNAP 322
Query: 98 GNEGGRGAPVGGSRTSCVTTTWHIPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAA 157
N G +P ++ C + P + CIL QASGS + P A
Sbjct: 323 LNRKGLVSPQSPQKSDCQPNS-------PTESCSSKNACIL--QASGSPPAKSPTDPKAC 373
Query: 158 ALLAQRLIRKDPLA--ALAPSPQQRKEHQF-PMSHTLTPAAQPPRGPE-----KPTSVHA 209
+ I + L A P+Q + + P ++T PA QPP PE PT + A
Sbjct: 374 NWKKYKFIVLNSLNQNAKPEGPEQAELGRLSPRAYTAPPACQPPMEPENLDLQSPTKLSA 433
Query: 210 --EEALRP--SRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCL 265
E++ P SRL+ V+ G RS + P P + SPQ CL
Sbjct: 434 SGEDSTIPQASRLNNIVNRSMTGSPRSSSESHSPLYMHPPKCTSCGSQ---SPQHAEMCL 490
Query: 266 ETGGKGAP 273
T G P
Sbjct: 491 HTAGPTFP 498
>gi|195927002 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]
Length = 706
Score = 45.1 bits (105), Expect = 2e-04
Identities = 64/248 (25%), Positives = 89/248 (35%), Gaps = 24/248 (9%)
Query: 38 ETLSSELPWGCHPSTCSLLTARGKSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLP 97
ET+ E H S L S ++ K S EE + E + P
Sbjct: 263 ETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPNAP 322
Query: 98 GNEGGRGAPVGGSRTSCVTTTWHIPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAA 157
N G +P ++ C + P + CIL QASGS + P A
Sbjct: 323 LNRKGLVSPQSPQKSDCQPNS-------PTESCSSKNACIL--QASGSPPAKSPTDPKAC 373
Query: 158 ALLAQRLIRKDPLA--ALAPSPQQRKEHQF-PMSHTLTPAAQPPRGPE-----KPTSVHA 209
+ I + L A P+Q + + P ++T PA QPP PE PT + A
Sbjct: 374 NWKKYKFIVLNSLNQNAKPEGPEQAELGRLSPRAYTAPPACQPPMEPENLDLQSPTKLSA 433
Query: 210 --EEALRP--SRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCL 265
E++ P SRL+ V+ G RS + P P + SPQ CL
Sbjct: 434 SGEDSTIPQASRLNNIVNRSMTGSPRSSSESHSPLYMHPPKCTSCGSQ---SPQHAEMCL 490
Query: 266 ETGGKGAP 273
T G P
Sbjct: 491 HTAGPTFP 498
>gi|4758216 dishevelled 2 [Homo sapiens]
Length = 736
Score = 43.1 bits (100), Expect = 7e-04
Identities = 44/155 (28%), Positives = 57/155 (36%), Gaps = 27/155 (17%)
Query: 278 APLPSTLACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQ 337
APLP L +F + +P H P P Y + + T GG
Sbjct: 537 APLPGATPWPLLPTFSYQYP------------APHPYSPQPPPYHELSSY-----TYGGG 579
Query: 338 GEERGRGRGRLGSGCSQEWAGAQTVGNPSPTGVQRPS-SASLAQVWSRQDSRTHPGEASC 396
G SG ++ GA G P + S S S ++ SR S GEAS
Sbjct: 580 SASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSGSGSESEPSSRGGSLRRGGEASG 639
Query: 397 CNPGSPWSWDLQGLLGGAQ-------LCPHGPPPG 424
+ G P +G GGA L P+GPPPG
Sbjct: 640 TSDGGPPP--SRGSTGGAPNLRAHPGLHPYGPPPG 672
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 40.4 bits (93), Expect = 0.004
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 169 PLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRG 228
P AA PSP+ P PAA PP P + + A P + GS
Sbjct: 965 PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 229 QSR-SKCAAGLPAASMPCSRGHIPADQIP--SPQAHARCLET--GGKGAPSLPRAPLP 281
+ K A+ PAA+ P +G A +P +P A L + GG PSL AP P
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTP 1082
Score = 36.2 bits (82), Expect = 0.083
Identities = 40/126 (31%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 169 PLAALAPSPQQRKEHQFPMSHTLTPAAQPPR---GPEKPTSVHA---EEALRPSRLHQAV 222
P AA PSP+ P PAA PP GP P+ A A PS
Sbjct: 942 PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPA 1001
Query: 223 DPGSRGQSRSKCAA-----GLPAAS-MPCSRGHIPADQIPSPQAHARCLETGGKGAPSLP 276
P +G G PAA+ P PA PSP+ KGAP+ P
Sbjct: 1002 TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPL-PKGAPTTP 1060
Query: 277 RAPLPS 282
A LPS
Sbjct: 1061 AATLPS 1066
Score = 36.2 bits (82), Expect = 0.083
Identities = 33/120 (27%), Positives = 44/120 (36%), Gaps = 9/120 (7%)
Query: 169 PLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRG 228
P AA PSP+ P PA PP P + + S A P +G
Sbjct: 988 PPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGA--STPPAATPPSPKG 1045
Query: 229 QSRS----KCAAGLPAASMPCSRGHIPADQI---PSPQAHARCLETGGKGAPSLPRAPLP 281
+ K A PAA++P +G + P+P A GG PS AP+P
Sbjct: 1046 SPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMP 1105
Score = 34.3 bits (77), Expect = 0.32
Identities = 66/282 (23%), Positives = 86/282 (30%), Gaps = 50/282 (17%)
Query: 169 PLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPE--KPTSVHAEEALRPSRLHQAVDPGS 226
P AA PSP+ P + PAA PP P+ T H P+ A P
Sbjct: 1082 PPAATPPSPKGGPATPSPKGAPMPPAATPP-SPKGGLATPPHKGAPTTPA----ATPPSP 1136
Query: 227 RGQSRS---KCAAGLPAASMPCSRGHI---PADQIPSPQAHARCLETGG------KGAPS 274
+G + K A PAA+ P +G + P P+ A GG KGAP+
Sbjct: 1137 KGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPT 1196
Query: 275 LPRAPLPSTLACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTG 334
P A PS G G P P T
Sbjct: 1197 TPAATPPSPKG--------------------GLATPSPKGAPTTPAAT-------PPSPK 1229
Query: 335 GGQGEERGRGRGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSRQDSRTHPG-- 392
GG +G + G P P G P +A+ + + H G
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGP--ATPPPKGAPTPPAATPPSLKGGLATPPHKGAP 1287
Query: 393 EASCCNPGSPWSWDLQGLLGGAQLCPHGPPPGHRSAPSFPGP 434
+ P SP GA P PP + +P P P
Sbjct: 1288 NPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPP 1329
Score = 32.0 bits (71), Expect = 1.6
Identities = 58/229 (25%), Positives = 78/229 (34%), Gaps = 39/229 (17%)
Query: 72 KKGSPEESGTQAPV----EPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWHIP----- 122
KKGS +G P+ P + A LP N GS+ S TT P
Sbjct: 811 KKGS---AGPDTPIGNLSSPVSPVEASFLPENS----LSFQGSKDSPATTHSPTPPSPKG 863
Query: 123 APHPASISIFRFRCILW---EQASGS-----FSRRPQACPGAAALLAQRLIRKDPLAALA 174
AP P++++ + + E + S F + A P A + P A A
Sbjct: 864 APTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARA 923
Query: 175 -PSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSK 233
P+P+ P PAA PP P + + A P G K
Sbjct: 924 TPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPK 983
Query: 234 CAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPS 282
A PAA+ P +G PSP KGAP+ P PS
Sbjct: 984 GAPTPPAATPPSPKG---GPATPSP-----------KGAPTPPAVTPPS 1018
Score = 32.0 bits (71), Expect = 1.6
Identities = 38/123 (30%), Positives = 42/123 (34%), Gaps = 13/123 (10%)
Query: 171 AALAPSPQQRKEHQFPMSHTLTPAAQPPR---GPEKPTSVHA---EEALRPSRLHQAVDP 224
AA PSP+ P TPAA PP GP P A A PS P
Sbjct: 1222 AATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATP 1281
Query: 225 GSRGQSRSKCAA-----GLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAP 279
+G G PA S P PA PSP+ KGAP+ P
Sbjct: 1282 PHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPG--TPPPKGAPTPPAVT 1339
Query: 280 LPS 282
PS
Sbjct: 1340 PPS 1342
>gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo
sapiens]
Length = 921
Score = 40.0 bits (92), Expect = 0.006
Identities = 47/162 (29%), Positives = 59/162 (36%), Gaps = 21/162 (12%)
Query: 328 GCDARTG--GGQGEERGRG-RGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSR 384
G D TG G G +G +G G S+ + G G P P P +A L R
Sbjct: 323 GADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGP-----PGTAGLPGELGR 377
Query: 385 QDSRTHPGEASCCNPGSPWSWDLQGLLG---GAQLCPHGPPPGHRSAPSFPG--PSSGSS 439
PG PG P +G +G G LCP+ PPG P PG G+
Sbjct: 378 VGPVGDPGRRG--PPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAK 435
Query: 440 AGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGLR 481
+ + HK EG + L P AQGLR
Sbjct: 436 GEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLR 471
>gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo
sapiens]
Length = 678
Score = 40.0 bits (92), Expect = 0.006
Identities = 47/162 (29%), Positives = 59/162 (36%), Gaps = 21/162 (12%)
Query: 328 GCDARTG--GGQGEERGRG-RGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSR 384
G D TG G G +G +G G S+ + G G P P P +A L R
Sbjct: 80 GADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGP-----PGTAGLPGELGR 134
Query: 385 QDSRTHPGEASCCNPGSPWSWDLQGLLG---GAQLCPHGPPPGHRSAPSFPG--PSSGSS 439
PG PG P +G +G G LCP+ PPG P PG G+
Sbjct: 135 VGPVGDPGRRG--PPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAK 192
Query: 440 AGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGLR 481
+ + HK EG + L P AQGLR
Sbjct: 193 GEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLR 228
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 40.0 bits (92), Expect = 0.006
Identities = 63/224 (28%), Positives = 78/224 (34%), Gaps = 21/224 (9%)
Query: 224 PGSRGQSRSKCAAGLPAASMPCS-RGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPS 282
PG G+ K AAG + P RG A +P P + E G +G+P LP PL +
Sbjct: 945 PGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLP-GPLGT 1003
Query: 283 TLACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTG--GGQGEE 340
AC V G L + D G P P G G G G++
Sbjct: 1004 KAAC----GKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDK 1059
Query: 341 RGRG-RGRLGSGCSQEWAGAQ-TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGE-ASCC 397
G RG G Q AG GNP G P L+ + S D + + C
Sbjct: 1060 GSPGSRGLPGFPGPQGPAGRDGAPGNPGERG--PPGKPGLSSLLSPGDINLLAKDVCNDC 1117
Query: 398 NPGSPWSWDLQGLLGGAQLCPHGP-------PPGHRSAPSFPGP 434
PG P L G G + P P G P PGP
Sbjct: 1118 PPGPPGLPGLPGFKGDKGV-PGKPGREGTEGKKGEAGPPGLPGP 1160
Score = 34.3 bits (77), Expect = 0.32
Identities = 73/280 (26%), Positives = 90/280 (32%), Gaps = 43/280 (15%)
Query: 186 PMSHTLTPAAQPPRGPEKPTSVHAEEALR--------PSRLHQAVDPGSRGQSRSKCAAG 237
P T P P GP P E R P + + G G+ K AG
Sbjct: 745 PPGPTGPPGKDGPNGPPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAG 804
Query: 238 LPAA-SMPCSRGHIPADQ-----IPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHS 291
LP A P RG DQ + P E G G P P ++L H
Sbjct: 805 LPGAPGFPGVRGE-KGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPH--- 860
Query: 292 FVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSID-EFGCDARTG--GGQGEERGRGRGRL 348
P + + G+ G P EP E G TG G +G+E G
Sbjct: 861 -----PRMPGEQGPKGEKGD-PGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHG---- 910
Query: 349 GSGCSQEWAGAQTVGNPSPTGVQRPSSA-SLAQVWSRQDSRTHPGEASCCNPGSPWSWDL 407
G + VG P P+G A L + R G A GSP
Sbjct: 911 APGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAG--EEGSPGPVGP 968
Query: 408 QGLLGGAQLCPHGPP-------PGHRSAPSFPGPSSGSSA 440
+G G L GPP PG R +P PGP +A
Sbjct: 969 RGDPGAPGL--PGPPGKGKDGEPGLRGSPGLPGPLGTKAA 1006
Score = 31.6 bits (70), Expect = 2.1
Identities = 61/256 (23%), Positives = 84/256 (32%), Gaps = 30/256 (11%)
Query: 186 PMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPC 245
P T+ PP P++P + +E+ ++ + G +G+ GLP
Sbjct: 442 PCQVTVVTEPPPPPPPQRPPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGPKGDI 501
Query: 246 SRGHIPADQIPSPQAHARCL--------ETGGKGAPSLPRAPLPSTLACQHLHSFVHGFP 297
G I P P+ + E G KG+ LP P G P
Sbjct: 502 --GAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEP 559
Query: 298 MLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWA 357
L + + G G P P + G +GE+ RG G +
Sbjct: 560 GLPGEVGMRGPQGP-PGLPGPPGRVGAPGLQGERGEKGTRGEKGERGL----DGFPGKPG 614
Query: 358 GAQTVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLC 417
G P P+GV P Q + G A PG P S Q L G Q
Sbjct: 615 DTGQQGRPGPSGVAGP-----------QGEKGDVGPAG--PPGVPGSVVQQEGLKGEQGA 661
Query: 418 PHGPPPGHRSAPSFPG 433
P P GH+ AP PG
Sbjct: 662 P--GPRGHQGAPGPPG 675
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 39.3 bits (90), Expect = 0.010
Identities = 76/312 (24%), Positives = 104/312 (33%), Gaps = 65/312 (20%)
Query: 196 QPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQI 255
QP ++ +++ A A P L ++ PG+ G S S G S+P S P
Sbjct: 5 QPEPKSQRDSALGAAAAATPGGLSLSLSPGASGSSGS----GSDGDSVPVS----PQPAP 56
Query: 256 PSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQASLGQVDGEHAGH 315
PSP A A CL P LP P P QHL + H + A
Sbjct: 57 PSPPA-APCLPPLAH-HPHLP--PHPPPPPPQHLAAPAH--------------QPQPAAQ 98
Query: 316 PHEPCYTSID-----EFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQTVGNPSPT-- 368
H ID +FGC Q RG G G E QT P
Sbjct: 99 LHRTTNFFIDNILRPDFGCKKEQPPPQLLVAAAARGGAGGGGRVERDRGQTAAGRDPVHP 158
Query: 369 -GVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHGPPPGHRS 427
G + P +ASL D+ P + S Q GA G P +
Sbjct: 159 LGTRAPGAASLL---CAPDANCGPPDGS------------QPAAAGAGASKAGNPAAAAA 203
Query: 428 APSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGLRLPQPSS 487
A + ++ ++A +P G + P AQG + P+ +
Sbjct: 204 AAAAAVAAAAAAAAAKPSDTGGGGSGGG----------------AGSPGAQGTKYPEHGN 247
Query: 488 PQILVGHSAGAG 499
P IL+ SA G
Sbjct: 248 PAILLMGSANGG 259
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 38.9 bits (89), Expect = 0.013
Identities = 78/326 (23%), Positives = 104/326 (31%), Gaps = 69/326 (21%)
Query: 225 GSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTL 284
G G G + GH+ ++ + L GG+GAP L L L
Sbjct: 442 GGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLL 501
Query: 285 ACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRG 344
C+ + ++ L Q+ G H G G +G G
Sbjct: 502 GCRTGWAAGRTLAGPRVRLGLEQLLGRHVG-------------------AGVRGGACGPH 542
Query: 345 RGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSAS--LAQVWSRQDSRTHPGEASC-CNPGS 401
RG + G E A + + + VQRP A L W + PG A C+
Sbjct: 543 RGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDLDG 602
Query: 402 PWS-----------WDLQGLLGGAQLCPHGPPPGHR-------SAPSF--------PGPS 435
P + L G GG G PG R APS P P+
Sbjct: 603 PRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPA 662
Query: 436 SGSSAG--LEPRVQFSHKRTEGLSLFFRNLD-VLSPQRLSAR----------PRAQGLRL 482
S +SAG P T+G S F LD R SAR RA +R
Sbjct: 663 SATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRS 722
Query: 483 PQPSSPQILVGHSAGAGDPRTQGCWL 508
P P+ A PR +G +L
Sbjct: 723 TTPRGPE--------ASSPRARGSFL 740
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 38.9 bits (89), Expect = 0.013
Identities = 78/326 (23%), Positives = 104/326 (31%), Gaps = 69/326 (21%)
Query: 225 GSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTL 284
G G G + GH+ ++ + L GG+GAP L L L
Sbjct: 442 GGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLL 501
Query: 285 ACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRG 344
C+ + ++ L Q+ G H G G +G G
Sbjct: 502 GCRTGWAAGRTLAGPRVRLGLEQLLGRHVG-------------------AGVRGGACGPH 542
Query: 345 RGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSAS--LAQVWSRQDSRTHPGEASC-CNPGS 401
RG + G E A + + + VQRP A L W + PG A C+
Sbjct: 543 RGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDLDG 602
Query: 402 PWS-----------WDLQGLLGGAQLCPHGPPPGHR-------SAPSF--------PGPS 435
P + L G GG G PG R APS P P+
Sbjct: 603 PRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPA 662
Query: 436 SGSSAG--LEPRVQFSHKRTEGLSLFFRNLD-VLSPQRLSAR----------PRAQGLRL 482
S +SAG P T+G S F LD R SAR RA +R
Sbjct: 663 SATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRS 722
Query: 483 PQPSSPQILVGHSAGAGDPRTQGCWL 508
P P+ A PR +G +L
Sbjct: 723 TTPRGPE--------ASSPRARGSFL 740
>gi|157266269 GATA like protein-1 [Homo sapiens]
Length = 271
Score = 38.9 bits (89), Expect = 0.013
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Query: 196 QPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQS------RSKCAAGLPAASMPCS--R 247
QPP P P + L P R + VDPG G + +P S+PCS
Sbjct: 114 QPPGTPSAPPQRRPRKQLNPCRGTERVDPGFEGVTLKFQIKPDSSLQIIPTYSLPCSSRS 173
Query: 248 GHIPADQIPSPQAHARCLETGGKGAPSL 275
PAD + P AH E G+ +L
Sbjct: 174 QESPADAVGGPAAHPGGTEAHSAGSEAL 201
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 38.9 bits (89), Expect = 0.013
Identities = 80/336 (23%), Positives = 117/336 (34%), Gaps = 65/336 (19%)
Query: 3 KGRLTGELVEPQVVKVGKQWEVDDGERNVSAE---EEGETLSSELPWGCHPSTCSLLTAR 59
+G G EP+ + G +WE +D ER + E+GE EL A
Sbjct: 287 QGERMGLTGEPEGLNDG-EWEQEDMERKAQGQGGPEQGEERKREL------QVPEENRAD 339
Query: 60 GKSEAGNAFWNRKK---GSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVT 116
+ E F + + G E+ G + P A++ +GGR VG +R+
Sbjct: 340 SQDEKSQTFLGKSEEVTGKQEDHGIKEKGVPVSGQEAKEPESWDGGRLGAVGRARSREEE 399
Query: 117 TTWHIPAPHPASIS--------IFRFRCILWEQASG--SFSRRPQACPGA---------- 156
H P+ PA I+ +F L Q G + SR + P A
Sbjct: 400 NEHHGPS-MPALIAPEDSPHCDLFPGASYLMTQIPGTQTESRAEELSPAALSPSLEPIRC 458
Query: 157 ----AALLAQRLIRKDPLAALAPSPQQRKEHQFP------------MSHTLTPAAQPPRG 200
+LL L + P + + QQ + S ++TP P
Sbjct: 459 SHQPISLLGSFLTEESPDKEIDQNSQQEESRLRKGTVSSQGTEVVFASASVTPPRTPDSA 518
Query: 201 PEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLP-AASMPCSRGHIPADQIPSPQ 259
P P + + P+ + A P + + + CAA P AS P S PSP
Sbjct: 519 PPSPAEAY---PITPASV-SARPPVAFPRRETSCAARAPETASAPLSMDD------PSPC 568
Query: 260 AHARCLETGGKGAPSL----PRAPLPSTLACQHLHS 291
+ G PS PR P ST QHL S
Sbjct: 569 GTSEMCPAALYGFPSTGTSPPRPPANSTGTVQHLRS 604
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 38.5 bits (88), Expect = 0.017
Identities = 49/191 (25%), Positives = 66/191 (34%), Gaps = 32/191 (16%)
Query: 148 RRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSV 207
RR A P + + QR P + +PSPQ+R P P PP P + T
Sbjct: 383 RRSPASPSCPSPVPQRRSPVPP-SCQSPSPQRRSPVP-PSCPAPQPRPPPPPPPGERTLA 440
Query: 208 HAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLET 267
A PS +A G R S A AS P + A +P P+A+ L
Sbjct: 441 ERAYAKPPSHHVKAGFQGRRSYSELAEGAAYAGASPPWLQAE--AATLPKPRAYGSELYG 498
Query: 268 GGK-------------------------GAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQ 302
G+ P+ P +P T+ C SF GFP+
Sbjct: 499 PGRPLSPRRAFEGIRLRFEKQPSEEDEWAVPTSPPSPEVGTIRCA---SFCAGFPIPESP 555
Query: 303 ASLGQVDGEHA 313
A+ EHA
Sbjct: 556 AATAYAHAEHA 566
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 38.5 bits (88), Expect = 0.017
Identities = 64/229 (27%), Positives = 81/229 (35%), Gaps = 39/229 (17%)
Query: 71 RKKGSPEESGTQAPVEPS--QALSAEQLPGNEGGRGAPVGGSRTSCVTTTWHIPAPHPAS 128
RK GS SG+++P PS + Q G G R GG S H P P+S
Sbjct: 287 RKTGSQRSSGSRSP-SPSGGSGWGSPQRNGGSGQRSGAHGGRPGSA-----HSPPDKPSS 340
Query: 129 ISIFRFR-----CILWEQASGSFSRRPQACP----------GAAALLAQRLIRKDPLAAL 173
S R R A G S P++ P G A +R R+ +
Sbjct: 341 PSP-RVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSS 399
Query: 174 APSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSR-GQSRS 232
A +P++R + P PPRG + S A + A PG G R
Sbjct: 400 ASAPRRRGRRR--------PRPAPPRGSSRSLS-RARSSSDSGSGRGAPGPGPEPGSERG 450
Query: 233 KCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLP 281
G A P PA PSP AH R GG S R+P P
Sbjct: 451 HGGHGKRAKERPPRAR--PASTSPSPGAHGR---RGGPEGKSSSRSPGP 494
>gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens]
Length = 1007
Score = 38.1 bits (87), Expect = 0.022
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 22/163 (13%)
Query: 136 CILWEQASGSFSRRPQACPGAA----ALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTL 191
C L + S + S+ P A P A AL + L + L P H+ P T
Sbjct: 671 CELGNRGSKNLSQSPGAVPQALVAWRALGPKLLSSSNELVTRHLPPAPLFPHETPP--TQ 728
Query: 192 TPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIP 251
+ QPP P+ P+S+ L P+ + P S ++ +G AS S +
Sbjct: 729 SQQTQPPVAPQAPSSI-----LLPAAPIPILSPCSPPSPQASSLSGPSPASSRLSSSSLS 783
Query: 252 A-----DQIPSPQAHARCL------ETGGKGAPSLPRAPLPST 283
+ D + +P+ A CL ET +PRAP P T
Sbjct: 784 SLGEDQDSVLTPEEVALCLELSEGEETPRNSVSPMPRAPSPPT 826
>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
Length = 457
Score = 37.7 bits (86), Expect = 0.029
Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 57/194 (29%)
Query: 133 RFRC---ILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSH 189
RF+C + ++A+G+ +A GA A AQ +
Sbjct: 254 RFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQ------------------------LGE 289
Query: 190 TLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGH 249
PA++ P G E P S + P + H+ G G+ + G PAA++
Sbjct: 290 AAGPASETPAGTESPHS-----SASPCQEHKR---GGLGELK-----GTPAAALS----- 331
Query: 250 IPADQIPSP----QAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQASL 305
P + PSP QA A L G P P P + L +H ++F H F + L +S
Sbjct: 332 -PPEPAPSPGQQQQAAAHLL-----GPPHHPGLPPEAHLKPEHHYAFNHPFSINNLMSS- 384
Query: 306 GQVDGEHAGHPHEP 319
+ H+ H H+P
Sbjct: 385 -EQQHHHSHHHHQP 397
>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
Length = 463
Score = 37.7 bits (86), Expect = 0.029
Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 57/194 (29%)
Query: 133 RFRC---ILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSH 189
RF+C + ++A+G+ +A GA A AQ +
Sbjct: 260 RFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQ------------------------LGE 295
Query: 190 TLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGH 249
PA++ P G E P S + P + H+ G G+ + G PAA++
Sbjct: 296 AAGPASETPAGTESPHS-----SASPCQEHKR---GGLGELK-----GTPAAALS----- 337
Query: 250 IPADQIPSP----QAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQASL 305
P + PSP QA A L G P P P + L +H ++F H F + L +S
Sbjct: 338 -PPEPAPSPGQQQQAAAHLL-----GPPHHPGLPPEAHLKPEHHYAFNHPFSINNLMSS- 390
Query: 306 GQVDGEHAGHPHEP 319
+ H+ H H+P
Sbjct: 391 -EQQHHHSHHHHQP 403
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 37.4 bits (85), Expect = 0.037
Identities = 42/170 (24%), Positives = 58/170 (34%), Gaps = 41/170 (24%)
Query: 122 PAPHPASIS-----IFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPS 176
P+P PA + +F R + + G PQ CPG + P +LAP
Sbjct: 1146 PSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSP----------PAKSLAPK 1195
Query: 177 PQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAA 236
+PP GP P+ +E L P L P +RG S
Sbjct: 1196 -------------------KPPTGPLPPSKEPLKEKLIPGPL----SPVARGGSNGGSNV 1232
Query: 237 GLPAASMPCSRGHIPADQIPSPQAHARC---LETGGKGAPSLPRAPLPST 283
G+ P R H A Q P R E +G+ P LP++
Sbjct: 1233 GMEDGERPRRRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSLTLPAS 1282
Score = 29.6 bits (65), Expect = 7.8
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 174 APSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSK 233
AP P KE P + A P PE+P ++ + A S G S S
Sbjct: 519 APPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSS 578
Query: 234 CAAGLPAAS-----MPCSRGHIPADQIPSP 258
++G AS +P G P +++P P
Sbjct: 579 TSSGSFEASPVEPQLPSKEGPEPPEEVPPP 608
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 37.4 bits (85), Expect = 0.037
Identities = 53/215 (24%), Positives = 72/215 (33%), Gaps = 21/215 (9%)
Query: 88 SQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWHIPAPHPASISIFRFRCILWE----QAS 143
S L++E+LP V T+ PAP PA S E AS
Sbjct: 491 SDRLASEELPSTA------VPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPAS 544
Query: 144 GSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEK 203
+R P +A+R R P P PQ P + L P + P P+
Sbjct: 545 PKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQA 604
Query: 204 PTSVHAEEALR----PSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQ 259
+LR P L +R QSR A+ PA+ P S +
Sbjct: 605 LPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVD 664
Query: 260 AHARCLETGGKGA-------PSLPRAPLPSTLACQ 287
A E G A P++P P P +LA +
Sbjct: 665 LGAATAEGGAPEAISGVPTPPAIPPQPRPRSLASE 699
>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
Length = 562
Score = 37.0 bits (84), Expect = 0.049
Identities = 62/263 (23%), Positives = 95/263 (36%), Gaps = 45/263 (17%)
Query: 76 PEESGTQAPVEPSQALSAE------QLPGNEGGRGAPVGGSRTSCVTTTWHIPAPHPASI 129
P +G A P A A+ +L G G +P GG + + P +
Sbjct: 66 PAPAGASASTPPPPAPEAQLPPFPRELAGRSAGGSSPEGGEDSDREDGNYCPPVKRERTS 125
Query: 130 SIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSH 189
S+ +F E+ S F +P LI +A PS Q+ KE Q
Sbjct: 126 SLTQFPPSQSEERSSGFRLKPPT-----------LIHGQAPSAGLPS-QKPKEQQ---RS 170
Query: 190 TLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAV-DPGSRGQSR-SKCAAGLPAASMPCSR 247
L PA +A +P L Q V G+ G S + C +PAAS +
Sbjct: 171 VLRPAVL--------------QAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPDTAA 216
Query: 248 GHIP---ADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQAS 304
P AD+ PQ + + + A + + Q+L V ++ S
Sbjct: 217 WRSPSEAADEEKEPQKNESSNASEEEACEKKDPATQQAFVFGQNLRDRVK-----LINES 271
Query: 305 LGQVDGEHAGHPHEPCYTSIDEF 327
+ + D E+AGHP T+ + F
Sbjct: 272 VDEADMENAGHPSADTPTATNYF 294
>gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]
Length = 1184
Score = 36.6 bits (83), Expect = 0.064
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 155 GAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALR 214
G AAL+ + + P + PSP P + + P + PR P+ H EE
Sbjct: 363 GKAALVPTQAVPGSPRDPVKPSPHNILSTSLPDAAWIPPTREVPRKPQVLPHSHVEEDTD 422
Query: 215 PSRLHQAVDPGSRGQSR----SKCAAG 237
P+ +H G ++ + CAAG
Sbjct: 423 PNSVHSIPRSSPEGSTKDLIETCCAAG 449
>gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]
Length = 1231
Score = 36.6 bits (83), Expect = 0.064
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 155 GAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALR 214
G AAL+ + + P + PSP P + + P + PR P+ H EE
Sbjct: 363 GKAALVPTQAVPGSPRDPVKPSPHNILSTSLPDAAWIPPTREVPRKPQVLPHSHVEEDTD 422
Query: 215 PSRLHQAVDPGSRGQSR----SKCAAG 237
P+ +H G ++ + CAAG
Sbjct: 423 PNSVHSIPRSSPEGSTKDLIETCCAAG 449
>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
Length = 733
Score = 36.2 bits (82), Expect = 0.083
Identities = 67/273 (24%), Positives = 85/273 (31%), Gaps = 67/273 (24%)
Query: 174 APSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQ---S 230
A +P + + P+ PAA+PP GPE + H E A PG S
Sbjct: 180 AATPVIQACYPSPVGPPPPPAAEPPSGPEAAVNTHCAELY-------ASGPGPAAALCAS 232
Query: 231 RSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSL-PRAPLPSTLACQHL 289
+C+ P + S+ P P R L PS P A LA L
Sbjct: 233 ERRCS---PLCGLDLSKKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLALPSL 289
Query: 290 HSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLG 349
P L Q E A P +P R G
Sbjct: 290 -------PPLPFQKL------EEAAPPSDPF--------------------------RGG 310
Query: 350 SGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSRQDSRTHP-GEASCCNPGSPWSWDLQ 408
SG +P P RP SL W + + G+ GSP S +
Sbjct: 311 SG------------SPGPEPPGRPDGPSLLYRWMKHEPGLGSYGDELGRERGSP-SERCE 357
Query: 409 GLLGGAQLCPHGPPPGHRSAPSFPGPSSGSSAG 441
G A + P GPP G P +PG G AG
Sbjct: 358 ERGGDAAVSPGGPPLGLAPPPRYPGSLDGPGAG 390
>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
Length = 714
Score = 36.2 bits (82), Expect = 0.083
Identities = 67/273 (24%), Positives = 85/273 (31%), Gaps = 67/273 (24%)
Query: 174 APSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQ---S 230
A +P + + P+ PAA+PP GPE + H E A PG S
Sbjct: 161 AATPVIQACYPSPVGPPPPPAAEPPSGPEAAVNTHCAELY-------ASGPGPAAALCAS 213
Query: 231 RSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSL-PRAPLPSTLACQHL 289
+C+ P + S+ P P R L PS P A LA L
Sbjct: 214 ERRCS---PLCGLDLSKKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLALPSL 270
Query: 290 HSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLG 349
P L Q E A P +P R G
Sbjct: 271 -------PPLPFQKL------EEAAPPSDPF--------------------------RGG 291
Query: 350 SGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSRQDSRTHP-GEASCCNPGSPWSWDLQ 408
SG +P P RP SL W + + G+ GSP S +
Sbjct: 292 SG------------SPGPEPPGRPDGPSLLYRWMKHEPGLGSYGDELGRERGSP-SERCE 338
Query: 409 GLLGGAQLCPHGPPPGHRSAPSFPGPSSGSSAG 441
G A + P GPP G P +PG G AG
Sbjct: 339 ERGGDAAVSPGGPPLGLAPPPRYPGSLDGPGAG 371
>gi|56090548 insulin-like growth factor binding protein-like 1 [Homo
sapiens]
Length = 278
Score = 36.2 bits (82), Expect = 0.083
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 15/88 (17%)
Query: 319 PCYTSIDEFGCDARTGGGQGEE-RGRGRGRLGSG--CSQEWAGAQTVGNPSPTGVQR--- 372
P +++DE GC AR G +G GR GR G G C+ + AGA G QR
Sbjct: 55 PGISALDECGCCARCLGAEGASCGGRAGGRCGPGLVCASQAAGAAPEGTGLCVCAQRGTV 114
Query: 373 --------PSSASLAQVWSRQDSRTHPG 392
PS +L ++ +R R HPG
Sbjct: 115 CGSDGRSYPSVCAL-RLRARHTPRAHPG 141
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 36.2 bits (82), Expect = 0.083
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 17/156 (10%)
Query: 139 WEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAA--- 195
W GS + R +C A Q LAA PSP + P + L+P+
Sbjct: 524 WVARRGSSAGRKVSC---APPSMQPPAPPAELAAPLPSPLPEQPLDSPAAPALSPSGLGL 580
Query: 196 QPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSR-SKCAAGLPAASMPCSRGHIPA-D 253
QP GPE+ ++ ++E L P + GS G S+ + CA P A G P+
Sbjct: 581 QP--GPERTSTTKSKE-LSPG----SAQKGSPGSSQGTACAGTQPGAQPGAQPGASPSPS 633
Query: 254 QIPSPQAHARCLETGGKGAPSLPRAPL--PSTLACQ 287
Q P+ Q+ + K AP P+ P P +A Q
Sbjct: 634 QPPADQSPHTLRKVSKKLAPIPPKVPFGQPGAMADQ 669
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,078,518
Number of Sequences: 37866
Number of extensions: 1870549
Number of successful extensions: 10199
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 9365
Number of HSP's gapped (non-prelim): 1207
length of query: 571
length of database: 18,247,518
effective HSP length: 108
effective length of query: 463
effective length of database: 14,157,990
effective search space: 6555149370
effective search space used: 6555149370
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.