Guide to the Human Genome
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Search of human proteins with 239752116

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo
sapiens]
         (571 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757609 PREDICTED: hypothetical protein [Homo sapiens]          1202   0.0  
gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo ...  1202   0.0  
gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo ...  1202   0.0  
gi|21040324 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]         45   2e-04
gi|197927147 B-cell lymphoma 6 protein isoform 2 [Homo sapiens]        45   2e-04
gi|195927002 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]        45   2e-04
gi|4758216 dishevelled 2 [Homo sapiens]                                43   7e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni...    40   0.004
gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo s...    40   0.006
gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo s...    40   0.006
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]                40   0.006
gi|126090909 engrailed homeobox 1 [Homo sapiens]                       39   0.010
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]            39   0.013
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]            39   0.013
gi|157266269 GATA like protein-1 [Homo sapiens]                        39   0.013
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]    39   0.013
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       39   0.017
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             39   0.017
gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens]      38   0.022
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                   38   0.029
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                  38   0.029
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              37   0.037
gi|85815829 SH3-domain binding protein 1 [Homo sapiens]                37   0.037
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]     37   0.049
gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]               37   0.064
gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]               37   0.064
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]      36   0.083
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]       36   0.083
gi|56090548 insulin-like growth factor binding protein-like 1 [H...    36   0.083
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]        36   0.083

>gi|239757609 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 571

 Score = 1202 bits (3109), Expect = 0.0
 Identities = 571/571 (100%), Positives = 571/571 (100%)

Query: 1   MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60
           MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG
Sbjct: 1   MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60

Query: 61  KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120
           KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH
Sbjct: 61  KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120

Query: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180
           IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR
Sbjct: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180

Query: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240
           KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA
Sbjct: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240

Query: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300
           ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV
Sbjct: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300

Query: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360
           LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ
Sbjct: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360

Query: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420
           TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG
Sbjct: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420

Query: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480
           PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL
Sbjct: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480

Query: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540
           RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS
Sbjct: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540

Query: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571
           AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC
Sbjct: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571


>gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo
           sapiens]
          Length = 571

 Score = 1202 bits (3109), Expect = 0.0
 Identities = 571/571 (100%), Positives = 571/571 (100%)

Query: 1   MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60
           MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG
Sbjct: 1   MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60

Query: 61  KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120
           KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH
Sbjct: 61  KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120

Query: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180
           IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR
Sbjct: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180

Query: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240
           KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA
Sbjct: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240

Query: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300
           ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV
Sbjct: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300

Query: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360
           LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ
Sbjct: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360

Query: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420
           TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG
Sbjct: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420

Query: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480
           PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL
Sbjct: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480

Query: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540
           RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS
Sbjct: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540

Query: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571
           AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC
Sbjct: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571


>gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo
           sapiens]
          Length = 571

 Score = 1202 bits (3109), Expect = 0.0
 Identities = 571/571 (100%), Positives = 571/571 (100%)

Query: 1   MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60
           MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG
Sbjct: 1   MCKGRLTGELVEPQVVKVGKQWEVDDGERNVSAEEEGETLSSELPWGCHPSTCSLLTARG 60

Query: 61  KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120
           KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH
Sbjct: 61  KSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWH 120

Query: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180
           IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR
Sbjct: 121 IPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQR 180

Query: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240
           KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA
Sbjct: 181 KEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPA 240

Query: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300
           ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV
Sbjct: 241 ASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLV 300

Query: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360
           LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ
Sbjct: 301 LQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQ 360

Query: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420
           TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG
Sbjct: 361 TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHG 420

Query: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480
           PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL
Sbjct: 421 PPPGHRSAPSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGL 480

Query: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540
           RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS
Sbjct: 481 RLPQPSSPQILVGHSAGAGDPRTQGCWLLGVAAVGAVWGKKWKLPWLWPRSSVDRARVLS 540

Query: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571
           AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC
Sbjct: 541 AAWPEPPSRQVTTSLGCGFLPCKRVDVHLSC 571


>gi|21040324 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]
          Length = 706

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 64/248 (25%), Positives = 89/248 (35%), Gaps = 24/248 (9%)

Query: 38  ETLSSELPWGCHPSTCSLLTARGKSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLP 97
           ET+  E     H S    L     S     ++   K S EE    +  E +        P
Sbjct: 263 ETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPNAP 322

Query: 98  GNEGGRGAPVGGSRTSCVTTTWHIPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAA 157
            N  G  +P    ++ C   +       P      +  CIL  QASGS   +    P A 
Sbjct: 323 LNRKGLVSPQSPQKSDCQPNS-------PTESCSSKNACIL--QASGSPPAKSPTDPKAC 373

Query: 158 ALLAQRLIRKDPLA--ALAPSPQQRKEHQF-PMSHTLTPAAQPPRGPE-----KPTSVHA 209
                + I  + L   A    P+Q +  +  P ++T  PA QPP  PE      PT + A
Sbjct: 374 NWKKYKFIVLNSLNQNAKPEGPEQAELGRLSPRAYTAPPACQPPMEPENLDLQSPTKLSA 433

Query: 210 --EEALRP--SRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCL 265
             E++  P  SRL+  V+    G  RS   +  P    P       +    SPQ    CL
Sbjct: 434 SGEDSTIPQASRLNNIVNRSMTGSPRSSSESHSPLYMHPPKCTSCGSQ---SPQHAEMCL 490

Query: 266 ETGGKGAP 273
            T G   P
Sbjct: 491 HTAGPTFP 498


>gi|197927147 B-cell lymphoma 6 protein isoform 2 [Homo sapiens]
          Length = 650

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 64/248 (25%), Positives = 89/248 (35%), Gaps = 24/248 (9%)

Query: 38  ETLSSELPWGCHPSTCSLLTARGKSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLP 97
           ET+  E     H S    L     S     ++   K S EE    +  E +        P
Sbjct: 263 ETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPNAP 322

Query: 98  GNEGGRGAPVGGSRTSCVTTTWHIPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAA 157
            N  G  +P    ++ C   +       P      +  CIL  QASGS   +    P A 
Sbjct: 323 LNRKGLVSPQSPQKSDCQPNS-------PTESCSSKNACIL--QASGSPPAKSPTDPKAC 373

Query: 158 ALLAQRLIRKDPLA--ALAPSPQQRKEHQF-PMSHTLTPAAQPPRGPE-----KPTSVHA 209
                + I  + L   A    P+Q +  +  P ++T  PA QPP  PE      PT + A
Sbjct: 374 NWKKYKFIVLNSLNQNAKPEGPEQAELGRLSPRAYTAPPACQPPMEPENLDLQSPTKLSA 433

Query: 210 --EEALRP--SRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCL 265
             E++  P  SRL+  V+    G  RS   +  P    P       +    SPQ    CL
Sbjct: 434 SGEDSTIPQASRLNNIVNRSMTGSPRSSSESHSPLYMHPPKCTSCGSQ---SPQHAEMCL 490

Query: 266 ETGGKGAP 273
            T G   P
Sbjct: 491 HTAGPTFP 498


>gi|195927002 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]
          Length = 706

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 64/248 (25%), Positives = 89/248 (35%), Gaps = 24/248 (9%)

Query: 38  ETLSSELPWGCHPSTCSLLTARGKSEAGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLP 97
           ET+  E     H S    L     S     ++   K S EE    +  E +        P
Sbjct: 263 ETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPNAP 322

Query: 98  GNEGGRGAPVGGSRTSCVTTTWHIPAPHPASISIFRFRCILWEQASGSFSRRPQACPGAA 157
            N  G  +P    ++ C   +       P      +  CIL  QASGS   +    P A 
Sbjct: 323 LNRKGLVSPQSPQKSDCQPNS-------PTESCSSKNACIL--QASGSPPAKSPTDPKAC 373

Query: 158 ALLAQRLIRKDPLA--ALAPSPQQRKEHQF-PMSHTLTPAAQPPRGPE-----KPTSVHA 209
                + I  + L   A    P+Q +  +  P ++T  PA QPP  PE      PT + A
Sbjct: 374 NWKKYKFIVLNSLNQNAKPEGPEQAELGRLSPRAYTAPPACQPPMEPENLDLQSPTKLSA 433

Query: 210 --EEALRP--SRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCL 265
             E++  P  SRL+  V+    G  RS   +  P    P       +    SPQ    CL
Sbjct: 434 SGEDSTIPQASRLNNIVNRSMTGSPRSSSESHSPLYMHPPKCTSCGSQ---SPQHAEMCL 490

Query: 266 ETGGKGAP 273
            T G   P
Sbjct: 491 HTAGPTFP 498


>gi|4758216 dishevelled 2 [Homo sapiens]
          Length = 736

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 44/155 (28%), Positives = 57/155 (36%), Gaps = 27/155 (17%)

Query: 278 APLPSTLACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQ 337
           APLP       L +F + +P              H   P  P Y  +  +     T GG 
Sbjct: 537 APLPGATPWPLLPTFSYQYP------------APHPYSPQPPPYHELSSY-----TYGGG 579

Query: 338 GEERGRGRGRLGSGCSQEWAGAQTVGNPSPTGVQRPS-SASLAQVWSRQDSRTHPGEASC 396
                   G   SG ++   GA   G P     +  S S S ++  SR  S    GEAS 
Sbjct: 580 SASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSGSGSESEPSSRGGSLRRGGEASG 639

Query: 397 CNPGSPWSWDLQGLLGGAQ-------LCPHGPPPG 424
            + G P     +G  GGA        L P+GPPPG
Sbjct: 640 TSDGGPPP--SRGSTGGAPNLRAHPGLHPYGPPPG 672


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 5/118 (4%)

Query: 169  PLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRG 228
            P AA  PSP+       P      PAA PP     P +   + A  P  +      GS  
Sbjct: 965  PPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA 1024

Query: 229  QSR-SKCAAGLPAASMPCSRGHIPADQIP--SPQAHARCLET--GGKGAPSLPRAPLP 281
             +   K A+  PAA+ P  +G   A  +P  +P   A  L +  GG   PSL  AP P
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTP 1082



 Score = 36.2 bits (82), Expect = 0.083
 Identities = 40/126 (31%), Positives = 46/126 (36%), Gaps = 13/126 (10%)

Query: 169  PLAALAPSPQQRKEHQFPMSHTLTPAAQPPR---GPEKPTSVHA---EEALRPSRLHQAV 222
            P AA  PSP+       P      PAA PP    GP  P+   A     A  PS      
Sbjct: 942  PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPA 1001

Query: 223  DPGSRGQSRSKCAA-----GLPAAS-MPCSRGHIPADQIPSPQAHARCLETGGKGAPSLP 276
             P  +G             G PAA+  P      PA   PSP+          KGAP+ P
Sbjct: 1002 TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPL-PKGAPTTP 1060

Query: 277  RAPLPS 282
             A LPS
Sbjct: 1061 AATLPS 1066



 Score = 36.2 bits (82), Expect = 0.083
 Identities = 33/120 (27%), Positives = 44/120 (36%), Gaps = 9/120 (7%)

Query: 169  PLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRG 228
            P AA  PSP+       P      PA  PP     P +    +    S    A  P  +G
Sbjct: 988  PPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGA--STPPAATPPSPKG 1045

Query: 229  QSRS----KCAAGLPAASMPCSRGHIPADQI---PSPQAHARCLETGGKGAPSLPRAPLP 281
               +    K A   PAA++P  +G      +   P+P A       GG   PS   AP+P
Sbjct: 1046 SPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMP 1105



 Score = 34.3 bits (77), Expect = 0.32
 Identities = 66/282 (23%), Positives = 86/282 (30%), Gaps = 50/282 (17%)

Query: 169  PLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPE--KPTSVHAEEALRPSRLHQAVDPGS 226
            P AA  PSP+       P    + PAA PP  P+    T  H      P+    A  P  
Sbjct: 1082 PPAATPPSPKGGPATPSPKGAPMPPAATPP-SPKGGLATPPHKGAPTTPA----ATPPSP 1136

Query: 227  RGQSRS---KCAAGLPAASMPCSRGHI---PADQIPSPQAHARCLETGG------KGAPS 274
            +G   +   K A   PAA+ P  +G +   P    P+  A       GG      KGAP+
Sbjct: 1137 KGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPT 1196

Query: 275  LPRAPLPSTLACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTG 334
             P A  PS                       G       G P  P  T            
Sbjct: 1197 TPAATPPSPKG--------------------GLATPSPKGAPTTPAAT-------PPSPK 1229

Query: 335  GGQGEERGRGRGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSRQDSRTHPG-- 392
            GG      +G     +       G      P P G   P +A+   +     +  H G  
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGP--ATPPPKGAPTPPAATPPSLKGGLATPPHKGAP 1287

Query: 393  EASCCNPGSPWSWDLQGLLGGAQLCPHGPPPGHRSAPSFPGP 434
              +   P SP          GA   P   PP  + +P  P P
Sbjct: 1288 NPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPP 1329



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 58/229 (25%), Positives = 78/229 (34%), Gaps = 39/229 (17%)

Query: 72   KKGSPEESGTQAPV----EPSQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWHIP----- 122
            KKGS   +G   P+     P   + A  LP N         GS+ S  TT    P     
Sbjct: 811  KKGS---AGPDTPIGNLSSPVSPVEASFLPENS----LSFQGSKDSPATTHSPTPPSPKG 863

Query: 123  APHPASISIFRFRCILW---EQASGS-----FSRRPQACPGAAALLAQRLIRKDPLAALA 174
            AP P++++    + +     E  + S     F +   A P      A  +    P  A A
Sbjct: 864  APTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARA 923

Query: 175  -PSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSK 233
             P+P+       P      PAA PP     P +   + A  P         G       K
Sbjct: 924  TPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPK 983

Query: 234  CAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPS 282
             A   PAA+ P  +G       PSP           KGAP+ P    PS
Sbjct: 984  GAPTPPAATPPSPKG---GPATPSP-----------KGAPTPPAVTPPS 1018



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 38/123 (30%), Positives = 42/123 (34%), Gaps = 13/123 (10%)

Query: 171  AALAPSPQQRKEHQFPMSHTLTPAAQPPR---GPEKPTSVHA---EEALRPSRLHQAVDP 224
            AA  PSP+       P     TPAA PP    GP  P    A     A  PS       P
Sbjct: 1222 AATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATP 1281

Query: 225  GSRGQSRSKCAA-----GLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAP 279
              +G             G PA S P      PA   PSP+          KGAP+ P   
Sbjct: 1282 PHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPG--TPPPKGAPTPPAVT 1339

Query: 280  LPS 282
             PS
Sbjct: 1340 PPS 1342


>gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo
           sapiens]
          Length = 921

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 47/162 (29%), Positives = 59/162 (36%), Gaps = 21/162 (12%)

Query: 328 GCDARTG--GGQGEERGRG-RGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSR 384
           G D  TG  G  G    +G +G  G   S+ + G    G P P     P +A L     R
Sbjct: 323 GADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGP-----PGTAGLPGELGR 377

Query: 385 QDSRTHPGEASCCNPGSPWSWDLQGLLG---GAQLCPHGPPPGHRSAPSFPG--PSSGSS 439
                 PG      PG P     +G +G   G  LCP+  PPG    P  PG     G+ 
Sbjct: 378 VGPVGDPGRRG--PPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAK 435

Query: 440 AGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGLR 481
             +    +  HK  EG      +   L        P AQGLR
Sbjct: 436 GEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLR 471


>gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo
           sapiens]
          Length = 678

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 47/162 (29%), Positives = 59/162 (36%), Gaps = 21/162 (12%)

Query: 328 GCDARTG--GGQGEERGRG-RGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSR 384
           G D  TG  G  G    +G +G  G   S+ + G    G P P     P +A L     R
Sbjct: 80  GADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGP-----PGTAGLPGELGR 134

Query: 385 QDSRTHPGEASCCNPGSPWSWDLQGLLG---GAQLCPHGPPPGHRSAPSFPG--PSSGSS 439
                 PG      PG P     +G +G   G  LCP+  PPG    P  PG     G+ 
Sbjct: 135 VGPVGDPGRRG--PPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAK 192

Query: 440 AGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGLR 481
             +    +  HK  EG      +   L        P AQGLR
Sbjct: 193 GEIGEPGRQGHKGEEG------DQGELGEVGAQGPPGAQGLR 228


>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
          Length = 1626

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 63/224 (28%), Positives = 78/224 (34%), Gaps = 21/224 (9%)

Query: 224  PGSRGQSRSKCAAGLPAASMPCS-RGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPS 282
            PG  G+   K AAG   +  P   RG   A  +P P    +  E G +G+P LP  PL +
Sbjct: 945  PGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLP-GPLGT 1003

Query: 283  TLACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTG--GGQGEE 340
              AC      V G     L     + D    G P  P        G     G  G  G++
Sbjct: 1004 KAAC----GKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDK 1059

Query: 341  RGRG-RGRLGSGCSQEWAGAQ-TVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGE-ASCC 397
               G RG  G    Q  AG     GNP   G   P    L+ + S  D      +  + C
Sbjct: 1060 GSPGSRGLPGFPGPQGPAGRDGAPGNPGERG--PPGKPGLSSLLSPGDINLLAKDVCNDC 1117

Query: 398  NPGSPWSWDLQGLLGGAQLCPHGP-------PPGHRSAPSFPGP 434
             PG P    L G  G   + P  P         G    P  PGP
Sbjct: 1118 PPGPPGLPGLPGFKGDKGV-PGKPGREGTEGKKGEAGPPGLPGP 1160



 Score = 34.3 bits (77), Expect = 0.32
 Identities = 73/280 (26%), Positives = 90/280 (32%), Gaps = 43/280 (15%)

Query: 186  PMSHTLTPAAQPPRGPEKPTSVHAEEALR--------PSRLHQAVDPGSRGQSRSKCAAG 237
            P   T  P    P GP  P     E   R        P    +  + G  G+   K  AG
Sbjct: 745  PPGPTGPPGKDGPNGPPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAG 804

Query: 238  LPAA-SMPCSRGHIPADQ-----IPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHS 291
            LP A   P  RG    DQ     +  P       E G  G    P  P  ++L   H   
Sbjct: 805  LPGAPGFPGVRGE-KGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPH--- 860

Query: 292  FVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSID-EFGCDARTG--GGQGEERGRGRGRL 348
                 P +  +       G+  G P EP       E G    TG  G +G+E   G    
Sbjct: 861  -----PRMPGEQGPKGEKGD-PGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHG---- 910

Query: 349  GSGCSQEWAGAQTVGNPSPTGVQRPSSA-SLAQVWSRQDSRTHPGEASCCNPGSPWSWDL 407
              G +        VG P P+G      A  L     +   R   G A     GSP     
Sbjct: 911  APGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAG--EEGSPGPVGP 968

Query: 408  QGLLGGAQLCPHGPP-------PGHRSAPSFPGPSSGSSA 440
            +G  G   L   GPP       PG R +P  PGP    +A
Sbjct: 969  RGDPGAPGL--PGPPGKGKDGEPGLRGSPGLPGPLGTKAA 1006



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 61/256 (23%), Positives = 84/256 (32%), Gaps = 30/256 (11%)

Query: 186 PMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPC 245
           P   T+     PP  P++P +  +E+      ++ +   G +G+       GLP      
Sbjct: 442 PCQVTVVTEPPPPPPPQRPPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGPKGDI 501

Query: 246 SRGHIPADQIPSPQAHARCL--------ETGGKGAPSLPRAPLPSTLACQHLHSFVHGFP 297
             G I     P P+     +        E G KG+  LP  P               G P
Sbjct: 502 --GAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEP 559

Query: 298 MLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLGSGCSQEWA 357
            L  +  +    G   G P  P          +    G +GE+  RG      G   +  
Sbjct: 560 GLPGEVGMRGPQGP-PGLPGPPGRVGAPGLQGERGEKGTRGEKGERGL----DGFPGKPG 614

Query: 358 GAQTVGNPSPTGVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLC 417
                G P P+GV  P           Q  +   G A    PG P S   Q  L G Q  
Sbjct: 615 DTGQQGRPGPSGVAGP-----------QGEKGDVGPAG--PPGVPGSVVQQEGLKGEQGA 661

Query: 418 PHGPPPGHRSAPSFPG 433
           P   P GH+ AP  PG
Sbjct: 662 P--GPRGHQGAPGPPG 675


>gi|126090909 engrailed homeobox 1 [Homo sapiens]
          Length = 392

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 76/312 (24%), Positives = 104/312 (33%), Gaps = 65/312 (20%)

Query: 196 QPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQI 255
           QP    ++ +++ A  A  P  L  ++ PG+ G S S    G    S+P S    P    
Sbjct: 5   QPEPKSQRDSALGAAAAATPGGLSLSLSPGASGSSGS----GSDGDSVPVS----PQPAP 56

Query: 256 PSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQASLGQVDGEHAGH 315
           PSP A A CL       P LP  P P     QHL +  H                + A  
Sbjct: 57  PSPPA-APCLPPLAH-HPHLP--PHPPPPPPQHLAAPAH--------------QPQPAAQ 98

Query: 316 PHEPCYTSID-----EFGCDARTGGGQGEERGRGRGRLGSGCSQEWAGAQTVGNPSPT-- 368
            H      ID     +FGC       Q       RG  G G   E    QT     P   
Sbjct: 99  LHRTTNFFIDNILRPDFGCKKEQPPPQLLVAAAARGGAGGGGRVERDRGQTAAGRDPVHP 158

Query: 369 -GVQRPSSASLAQVWSRQDSRTHPGEASCCNPGSPWSWDLQGLLGGAQLCPHGPPPGHRS 427
            G + P +ASL       D+   P + S            Q    GA     G P    +
Sbjct: 159 LGTRAPGAASLL---CAPDANCGPPDGS------------QPAAAGAGASKAGNPAAAAA 203

Query: 428 APSFPGPSSGSSAGLEPRVQFSHKRTEGLSLFFRNLDVLSPQRLSARPRAQGLRLPQPSS 487
           A +    ++ ++A  +P          G                +  P AQG + P+  +
Sbjct: 204 AAAAAVAAAAAAAAAKPSDTGGGGSGGG----------------AGSPGAQGTKYPEHGN 247

Query: 488 PQILVGHSAGAG 499
           P IL+  SA  G
Sbjct: 248 PAILLMGSANGG 259


>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 78/326 (23%), Positives = 104/326 (31%), Gaps = 69/326 (21%)

Query: 225 GSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTL 284
           G  G        G     +    GH+   ++   +     L  GG+GAP L    L   L
Sbjct: 442 GGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLL 501

Query: 285 ACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRG 344
            C+   +         ++  L Q+ G H G                    G +G   G  
Sbjct: 502 GCRTGWAAGRTLAGPRVRLGLEQLLGRHVG-------------------AGVRGGACGPH 542

Query: 345 RGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSAS--LAQVWSRQDSRTHPGEASC-CNPGS 401
           RG +  G   E A  + +   +   VQRP  A   L   W    +   PG A   C+   
Sbjct: 543 RGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDLDG 602

Query: 402 PWS-----------WDLQGLLGGAQLCPHGPPPGHR-------SAPSF--------PGPS 435
           P +             L G  GG      G  PG R        APS         P P+
Sbjct: 603 PRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPA 662

Query: 436 SGSSAG--LEPRVQFSHKRTEGLSLFFRNLD-VLSPQRLSAR----------PRAQGLRL 482
           S +SAG    P        T+G S  F  LD      R SAR           RA  +R 
Sbjct: 663 SATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRS 722

Query: 483 PQPSSPQILVGHSAGAGDPRTQGCWL 508
             P  P+        A  PR +G +L
Sbjct: 723 TTPRGPE--------ASSPRARGSFL 740


>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 78/326 (23%), Positives = 104/326 (31%), Gaps = 69/326 (21%)

Query: 225 GSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLPSTL 284
           G  G        G     +    GH+   ++   +     L  GG+GAP L    L   L
Sbjct: 442 GGGGSDHGGLLFGAAVVVLRGQHGHLRGGEVAQLEGFPFMLRAGGRGAPGLQAEELGGLL 501

Query: 285 ACQHLHSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRG 344
            C+   +         ++  L Q+ G H G                    G +G   G  
Sbjct: 502 GCRTGWAAGRTLAGPRVRLGLEQLLGRHVG-------------------AGVRGGACGPH 542

Query: 345 RGRLGSGCSQEWAGAQTVGNPSPTGVQRPSSAS--LAQVWSRQDSRTHPGEASC-CNPGS 401
           RG +  G   E A  + +   +   VQRP  A   L   W    +   PG A   C+   
Sbjct: 543 RGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAGPGIARLGCDLDG 602

Query: 402 PWS-----------WDLQGLLGGAQLCPHGPPPGHR-------SAPSF--------PGPS 435
           P +             L G  GG      G  PG R        APS         P P+
Sbjct: 603 PRALVEGLHGRHEGGPLGGAGGGGSGEGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPA 662

Query: 436 SGSSAG--LEPRVQFSHKRTEGLSLFFRNLD-VLSPQRLSAR----------PRAQGLRL 482
           S +SAG    P        T+G S  F  LD      R SAR           RA  +R 
Sbjct: 663 SATSAGSPTSPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRS 722

Query: 483 PQPSSPQILVGHSAGAGDPRTQGCWL 508
             P  P+        A  PR +G +L
Sbjct: 723 TTPRGPE--------ASSPRARGSFL 740


>gi|157266269 GATA like protein-1 [Homo sapiens]
          Length = 271

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 8/88 (9%)

Query: 196 QPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQS------RSKCAAGLPAASMPCS--R 247
           QPP  P  P      + L P R  + VDPG  G +             +P  S+PCS   
Sbjct: 114 QPPGTPSAPPQRRPRKQLNPCRGTERVDPGFEGVTLKFQIKPDSSLQIIPTYSLPCSSRS 173

Query: 248 GHIPADQIPSPQAHARCLETGGKGAPSL 275
              PAD +  P AH    E    G+ +L
Sbjct: 174 QESPADAVGGPAAHPGGTEAHSAGSEAL 201


>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
          Length = 1597

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 80/336 (23%), Positives = 117/336 (34%), Gaps = 65/336 (19%)

Query: 3   KGRLTGELVEPQVVKVGKQWEVDDGERNVSAE---EEGETLSSELPWGCHPSTCSLLTAR 59
           +G   G   EP+ +  G +WE +D ER    +   E+GE    EL             A 
Sbjct: 287 QGERMGLTGEPEGLNDG-EWEQEDMERKAQGQGGPEQGEERKREL------QVPEENRAD 339

Query: 60  GKSEAGNAFWNRKK---GSPEESGTQAPVEPSQALSAEQLPGNEGGRGAPVGGSRTSCVT 116
            + E    F  + +   G  E+ G +    P     A++    +GGR   VG +R+    
Sbjct: 340 SQDEKSQTFLGKSEEVTGKQEDHGIKEKGVPVSGQEAKEPESWDGGRLGAVGRARSREEE 399

Query: 117 TTWHIPAPHPASIS--------IFRFRCILWEQASG--SFSRRPQACPGA---------- 156
              H P+  PA I+        +F     L  Q  G  + SR  +  P A          
Sbjct: 400 NEHHGPS-MPALIAPEDSPHCDLFPGASYLMTQIPGTQTESRAEELSPAALSPSLEPIRC 458

Query: 157 ----AALLAQRLIRKDPLAALAPSPQQRKEHQFP------------MSHTLTPAAQPPRG 200
                +LL   L  + P   +  + QQ +                  S ++TP   P   
Sbjct: 459 SHQPISLLGSFLTEESPDKEIDQNSQQEESRLRKGTVSSQGTEVVFASASVTPPRTPDSA 518

Query: 201 PEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLP-AASMPCSRGHIPADQIPSPQ 259
           P  P   +    + P+ +  A  P +  +  + CAA  P  AS P S         PSP 
Sbjct: 519 PPSPAEAY---PITPASV-SARPPVAFPRRETSCAARAPETASAPLSMDD------PSPC 568

Query: 260 AHARCLETGGKGAPSL----PRAPLPSTLACQHLHS 291
             +        G PS     PR P  ST   QHL S
Sbjct: 569 GTSEMCPAALYGFPSTGTSPPRPPANSTGTVQHLRS 604


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 49/191 (25%), Positives = 66/191 (34%), Gaps = 32/191 (16%)

Query: 148 RRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSV 207
           RR  A P   + + QR     P +  +PSPQ+R     P      P   PP  P + T  
Sbjct: 383 RRSPASPSCPSPVPQRRSPVPP-SCQSPSPQRRSPVP-PSCPAPQPRPPPPPPPGERTLA 440

Query: 208 HAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLET 267
               A  PS   +A   G R  S     A    AS P  +    A  +P P+A+   L  
Sbjct: 441 ERAYAKPPSHHVKAGFQGRRSYSELAEGAAYAGASPPWLQAE--AATLPKPRAYGSELYG 498

Query: 268 GGK-------------------------GAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQ 302
            G+                           P+ P +P   T+ C    SF  GFP+    
Sbjct: 499 PGRPLSPRRAFEGIRLRFEKQPSEEDEWAVPTSPPSPEVGTIRCA---SFCAGFPIPESP 555

Query: 303 ASLGQVDGEHA 313
           A+      EHA
Sbjct: 556 AATAYAHAEHA 566


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 64/229 (27%), Positives = 81/229 (35%), Gaps = 39/229 (17%)

Query: 71  RKKGSPEESGTQAPVEPS--QALSAEQLPGNEGGRGAPVGGSRTSCVTTTWHIPAPHPAS 128
           RK GS   SG+++P  PS      + Q  G  G R    GG   S      H P   P+S
Sbjct: 287 RKTGSQRSSGSRSP-SPSGGSGWGSPQRNGGSGQRSGAHGGRPGSA-----HSPPDKPSS 340

Query: 129 ISIFRFR-----CILWEQASGSFSRRPQACP----------GAAALLAQRLIRKDPLAAL 173
            S  R R           A G  S  P++ P          G A    +R  R+    + 
Sbjct: 341 PSP-RVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSS 399

Query: 174 APSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSR-GQSRS 232
           A +P++R   +        P   PPRG  +  S  A  +        A  PG   G  R 
Sbjct: 400 ASAPRRRGRRR--------PRPAPPRGSSRSLS-RARSSSDSGSGRGAPGPGPEPGSERG 450

Query: 233 KCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSLPRAPLP 281
               G  A   P      PA   PSP AH R    GG    S  R+P P
Sbjct: 451 HGGHGKRAKERPPRAR--PASTSPSPGAHGR---RGGPEGKSSSRSPGP 494


>gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens]
          Length = 1007

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 22/163 (13%)

Query: 136 CILWEQASGSFSRRPQACPGAA----ALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTL 191
           C L  + S + S+ P A P A     AL  + L   + L      P     H+ P   T 
Sbjct: 671 CELGNRGSKNLSQSPGAVPQALVAWRALGPKLLSSSNELVTRHLPPAPLFPHETPP--TQ 728

Query: 192 TPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIP 251
           +   QPP  P+ P+S+     L P+     + P S    ++   +G   AS   S   + 
Sbjct: 729 SQQTQPPVAPQAPSSI-----LLPAAPIPILSPCSPPSPQASSLSGPSPASSRLSSSSLS 783

Query: 252 A-----DQIPSPQAHARCL------ETGGKGAPSLPRAPLPST 283
           +     D + +P+  A CL      ET       +PRAP P T
Sbjct: 784 SLGEDQDSVLTPEEVALCLELSEGEETPRNSVSPMPRAPSPPT 826


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 57/194 (29%)

Query: 133 RFRC---ILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSH 189
           RF+C   +  ++A+G+     +A  GA A  AQ                        +  
Sbjct: 254 RFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQ------------------------LGE 289

Query: 190 TLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGH 249
              PA++ P G E P S     +  P + H+    G  G+ +     G PAA++      
Sbjct: 290 AAGPASETPAGTESPHS-----SASPCQEHKR---GGLGELK-----GTPAAALS----- 331

Query: 250 IPADQIPSP----QAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQASL 305
            P +  PSP    QA A  L     G P  P  P  + L  +H ++F H F +  L +S 
Sbjct: 332 -PPEPAPSPGQQQQAAAHLL-----GPPHHPGLPPEAHLKPEHHYAFNHPFSINNLMSS- 384

Query: 306 GQVDGEHAGHPHEP 319
            +    H+ H H+P
Sbjct: 385 -EQQHHHSHHHHQP 397


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 57/194 (29%)

Query: 133 RFRC---ILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSH 189
           RF+C   +  ++A+G+     +A  GA A  AQ                        +  
Sbjct: 260 RFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQ------------------------LGE 295

Query: 190 TLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGH 249
              PA++ P G E P S     +  P + H+    G  G+ +     G PAA++      
Sbjct: 296 AAGPASETPAGTESPHS-----SASPCQEHKR---GGLGELK-----GTPAAALS----- 337

Query: 250 IPADQIPSP----QAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQASL 305
            P +  PSP    QA A  L     G P  P  P  + L  +H ++F H F +  L +S 
Sbjct: 338 -PPEPAPSPGQQQQAAAHLL-----GPPHHPGLPPEAHLKPEHHYAFNHPFSINNLMSS- 390

Query: 306 GQVDGEHAGHPHEP 319
            +    H+ H H+P
Sbjct: 391 -EQQHHHSHHHHQP 403


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 37.4 bits (85), Expect = 0.037
 Identities = 42/170 (24%), Positives = 58/170 (34%), Gaps = 41/170 (24%)

Query: 122  PAPHPASIS-----IFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPS 176
            P+P PA  +     +F  R +   +  G     PQ CPG +           P  +LAP 
Sbjct: 1146 PSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSP----------PAKSLAPK 1195

Query: 177  PQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSKCAA 236
                               +PP GP  P+    +E L P  L     P +RG S      
Sbjct: 1196 -------------------KPPTGPLPPSKEPLKEKLIPGPL----SPVARGGSNGGSNV 1232

Query: 237  GLPAASMPCSRGHIPADQIPSPQAHARC---LETGGKGAPSLPRAPLPST 283
            G+     P  R H  A Q   P    R     E   +G+   P   LP++
Sbjct: 1233 GMEDGERPRRRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSLTLPAS 1282



 Score = 29.6 bits (65), Expect = 7.8
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 5/90 (5%)

Query: 174 APSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSRSK 233
           AP P   KE   P +     A  P   PE+P      ++     +  A    S G S S 
Sbjct: 519 APPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSS 578

Query: 234 CAAGLPAAS-----MPCSRGHIPADQIPSP 258
            ++G   AS     +P   G  P +++P P
Sbjct: 579 TSSGSFEASPVEPQLPSKEGPEPPEEVPPP 608


>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
          Length = 701

 Score = 37.4 bits (85), Expect = 0.037
 Identities = 53/215 (24%), Positives = 72/215 (33%), Gaps = 21/215 (9%)

Query: 88  SQALSAEQLPGNEGGRGAPVGGSRTSCVTTTWHIPAPHPASISIFRFRCILWE----QAS 143
           S  L++E+LP         V    T+        PAP PA  S         E     AS
Sbjct: 491 SDRLASEELPSTA------VPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPAS 544

Query: 144 GSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEK 203
              +R P         +A+R  R  P     P PQ       P +  L P +  P  P+ 
Sbjct: 545 PKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQA 604

Query: 204 PTSVHAEEALR----PSRLHQAVDPGSRGQSRSKCAAGLPAASMPCSRGHIPADQIPSPQ 259
                   +LR    P  L       +R QSR   A+  PA+  P S   +         
Sbjct: 605 LPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVD 664

Query: 260 AHARCLETGGKGA-------PSLPRAPLPSTLACQ 287
             A   E G   A       P++P  P P +LA +
Sbjct: 665 LGAATAEGGAPEAISGVPTPPAIPPQPRPRSLASE 699


>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
          Length = 562

 Score = 37.0 bits (84), Expect = 0.049
 Identities = 62/263 (23%), Positives = 95/263 (36%), Gaps = 45/263 (17%)

Query: 76  PEESGTQAPVEPSQALSAE------QLPGNEGGRGAPVGGSRTSCVTTTWHIPAPHPASI 129
           P  +G  A   P  A  A+      +L G   G  +P GG  +      +  P     + 
Sbjct: 66  PAPAGASASTPPPPAPEAQLPPFPRELAGRSAGGSSPEGGEDSDREDGNYCPPVKRERTS 125

Query: 130 SIFRFRCILWEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSH 189
           S+ +F     E+ S  F  +P             LI     +A  PS Q+ KE Q     
Sbjct: 126 SLTQFPPSQSEERSSGFRLKPPT-----------LIHGQAPSAGLPS-QKPKEQQ---RS 170

Query: 190 TLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAV-DPGSRGQSR-SKCAAGLPAASMPCSR 247
            L PA                +A +P  L Q V   G+ G S  + C   +PAAS   + 
Sbjct: 171 VLRPAVL--------------QAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPDTAA 216

Query: 248 GHIP---ADQIPSPQAHARCLETGGKGAPSLPRAPLPSTLACQHLHSFVHGFPMLVLQAS 304
              P   AD+   PQ +     +  +       A   + +  Q+L   V      ++  S
Sbjct: 217 WRSPSEAADEEKEPQKNESSNASEEEACEKKDPATQQAFVFGQNLRDRVK-----LINES 271

Query: 305 LGQVDGEHAGHPHEPCYTSIDEF 327
           + + D E+AGHP     T+ + F
Sbjct: 272 VDEADMENAGHPSADTPTATNYF 294


>gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]
          Length = 1184

 Score = 36.6 bits (83), Expect = 0.064
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 155 GAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALR 214
           G AAL+  + +   P   + PSP        P +  + P  + PR P+     H EE   
Sbjct: 363 GKAALVPTQAVPGSPRDPVKPSPHNILSTSLPDAAWIPPTREVPRKPQVLPHSHVEEDTD 422

Query: 215 PSRLHQAVDPGSRGQSR----SKCAAG 237
           P+ +H        G ++    + CAAG
Sbjct: 423 PNSVHSIPRSSPEGSTKDLIETCCAAG 449


>gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]
          Length = 1231

 Score = 36.6 bits (83), Expect = 0.064
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 155 GAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALR 214
           G AAL+  + +   P   + PSP        P +  + P  + PR P+     H EE   
Sbjct: 363 GKAALVPTQAVPGSPRDPVKPSPHNILSTSLPDAAWIPPTREVPRKPQVLPHSHVEEDTD 422

Query: 215 PSRLHQAVDPGSRGQSR----SKCAAG 237
           P+ +H        G ++    + CAAG
Sbjct: 423 PNSVHSIPRSSPEGSTKDLIETCCAAG 449


>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
          Length = 733

 Score = 36.2 bits (82), Expect = 0.083
 Identities = 67/273 (24%), Positives = 85/273 (31%), Gaps = 67/273 (24%)

Query: 174 APSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQ---S 230
           A +P  +  +  P+     PAA+PP GPE   + H  E         A  PG       S
Sbjct: 180 AATPVIQACYPSPVGPPPPPAAEPPSGPEAAVNTHCAELY-------ASGPGPAAALCAS 232

Query: 231 RSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSL-PRAPLPSTLACQHL 289
             +C+   P   +  S+   P    P      R L       PS  P A     LA   L
Sbjct: 233 ERRCS---PLCGLDLSKKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLALPSL 289

Query: 290 HSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLG 349
                  P L  Q        E A  P +P                           R G
Sbjct: 290 -------PPLPFQKL------EEAAPPSDPF--------------------------RGG 310

Query: 350 SGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSRQDSRTHP-GEASCCNPGSPWSWDLQ 408
           SG            +P P    RP   SL   W + +      G+      GSP S   +
Sbjct: 311 SG------------SPGPEPPGRPDGPSLLYRWMKHEPGLGSYGDELGRERGSP-SERCE 357

Query: 409 GLLGGAQLCPHGPPPGHRSAPSFPGPSSGSSAG 441
              G A + P GPP G    P +PG   G  AG
Sbjct: 358 ERGGDAAVSPGGPPLGLAPPPRYPGSLDGPGAG 390


>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
          Length = 714

 Score = 36.2 bits (82), Expect = 0.083
 Identities = 67/273 (24%), Positives = 85/273 (31%), Gaps = 67/273 (24%)

Query: 174 APSPQQRKEHQFPMSHTLTPAAQPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQ---S 230
           A +P  +  +  P+     PAA+PP GPE   + H  E         A  PG       S
Sbjct: 161 AATPVIQACYPSPVGPPPPPAAEPPSGPEAAVNTHCAELY-------ASGPGPAAALCAS 213

Query: 231 RSKCAAGLPAASMPCSRGHIPADQIPSPQAHARCLETGGKGAPSL-PRAPLPSTLACQHL 289
             +C+   P   +  S+   P    P      R L       PS  P A     LA   L
Sbjct: 214 ERRCS---PLCGLDLSKKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLALPSL 270

Query: 290 HSFVHGFPMLVLQASLGQVDGEHAGHPHEPCYTSIDEFGCDARTGGGQGEERGRGRGRLG 349
                  P L  Q        E A  P +P                           R G
Sbjct: 271 -------PPLPFQKL------EEAAPPSDPF--------------------------RGG 291

Query: 350 SGCSQEWAGAQTVGNPSPTGVQRPSSASLAQVWSRQDSRTHP-GEASCCNPGSPWSWDLQ 408
           SG            +P P    RP   SL   W + +      G+      GSP S   +
Sbjct: 292 SG------------SPGPEPPGRPDGPSLLYRWMKHEPGLGSYGDELGRERGSP-SERCE 338

Query: 409 GLLGGAQLCPHGPPPGHRSAPSFPGPSSGSSAG 441
              G A + P GPP G    P +PG   G  AG
Sbjct: 339 ERGGDAAVSPGGPPLGLAPPPRYPGSLDGPGAG 371


>gi|56090548 insulin-like growth factor binding protein-like 1 [Homo
           sapiens]
          Length = 278

 Score = 36.2 bits (82), Expect = 0.083
 Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 15/88 (17%)

Query: 319 PCYTSIDEFGCDARTGGGQGEE-RGRGRGRLGSG--CSQEWAGAQTVGNPSPTGVQR--- 372
           P  +++DE GC AR  G +G    GR  GR G G  C+ + AGA   G       QR   
Sbjct: 55  PGISALDECGCCARCLGAEGASCGGRAGGRCGPGLVCASQAAGAAPEGTGLCVCAQRGTV 114

Query: 373 --------PSSASLAQVWSRQDSRTHPG 392
                   PS  +L ++ +R   R HPG
Sbjct: 115 CGSDGRSYPSVCAL-RLRARHTPRAHPG 141


>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
          Length = 818

 Score = 36.2 bits (82), Expect = 0.083
 Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 17/156 (10%)

Query: 139 WEQASGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAA--- 195
           W    GS + R  +C   A    Q       LAA  PSP   +    P +  L+P+    
Sbjct: 524 WVARRGSSAGRKVSC---APPSMQPPAPPAELAAPLPSPLPEQPLDSPAAPALSPSGLGL 580

Query: 196 QPPRGPEKPTSVHAEEALRPSRLHQAVDPGSRGQSR-SKCAAGLPAASMPCSRGHIPA-D 253
           QP  GPE+ ++  ++E L P     +   GS G S+ + CA   P A      G  P+  
Sbjct: 581 QP--GPERTSTTKSKE-LSPG----SAQKGSPGSSQGTACAGTQPGAQPGAQPGASPSPS 633

Query: 254 QIPSPQAHARCLETGGKGAPSLPRAPL--PSTLACQ 287
           Q P+ Q+     +   K AP  P+ P   P  +A Q
Sbjct: 634 QPPADQSPHTLRKVSKKLAPIPPKVPFGQPGAMADQ 669


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,078,518
Number of Sequences: 37866
Number of extensions: 1870549
Number of successful extensions: 10199
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 9365
Number of HSP's gapped (non-prelim): 1207
length of query: 571
length of database: 18,247,518
effective HSP length: 108
effective length of query: 463
effective length of database: 14,157,990
effective search space: 6555149370
effective search space used: 6555149370
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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