Guide to the Human Genome
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Name: C19orf68 Sequence: fasta or formatted (578aa) NCBI GI: 239751835
Description:

PREDICTED: chromosome 19 open reading frame 68

Not currently referenced in the text

Other entries for this name:
alt mRNA {578aa} PREDICTED: hypothetical protein LOC374920
alt mRNA {578aa} PREDICTED: chromosome 19 open reading frame 68
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         62           2
 C cysteine            2.8         16           2
 D aspartate           5.5         32           1
 E glutamate           7.1         41           1
 F phenylalanine       2.9         17           2
 G glycine            10.0         58           3
 H histidine           1.7         10           1
 I isoleucine          1.4          8           2
 K lysine              3.1         18           1
 L leucine            12.3         71           2
 M methionine          0.9          5           1
 N asparagine          0.9          5           1
 P proline             6.2         36           2
 Q glutamine           4.2         24           1
 R arginine           11.9         69           3
 S serine              4.0         23           2
 T threonine           3.3         19           2
 V valine              6.6         38           2
 W tryptophan          2.6         15           1
 Y tyrosine            1.9         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: chromosome 19 open reading frame 68 [Hom... 
C19orf68              1.000   PREDICTED: chromosome 19 open reading frame 68 [Hom...
C19orf68              1.000   PREDICTED: hypothetical protein LOC374920 
ZSWIM3                0.012   zinc finger, SWIM domain containing 3 
XAB2                  0.011   XPA binding protein 2 
EIF3A                 0.010   eukaryotic translation initiation factor 3, subunit 1...
RPGR                  0.009   retinitis pigmentosa GTPase regulator isoform C [Hom...
FREM3                 0.009   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
FREM3                 0.009   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
FREM3                 0.009   PREDICTED: FRAS1 related extracellular matrix 3 [Ho...
RHOXF2                0.009   Rhox homeobox family, member 2 
RHOXF2B               0.008   Rhox homeobox family, member 2B 
KIAA1949              0.008   phostensin 
KIAA1949              0.008   phostensin 
SIRT1                 0.007   sirtuin 1 isoform a 
CCDC27                0.007   coiled-coil domain containing 27 
LOC100128703          0.006   PREDICTED: hypothetical protein 
ZNF324                0.006   zinc finger protein 324 
HSD17B1               0.006   hydroxysteroid (17-beta) dehydrogenase 1 
LOC100128703          0.006   PREDICTED: hypothetical protein LOC100128703 
BTBD12                0.006   BTB (POZ) domain containing 12 
CLEC11A               0.005   stem cell growth factor precursor 
EID1                  0.005   CREBBP/EP300 inhibitor 1 
PIM2                  0.005   serine/threonine protein kinase pim-2 
TSGA10IP              0.005   testis specific, 10 interacting protein 
TWIST1                0.005   twist 
RP1L1                 0.005   retinitis pigmentosa 1-like 1 
TMEM158               0.005   Ras-induced senescence 1 
LOC283685             0.004   PREDICTED: golgi autoantigen, golgin subfamily a-li...
SUV39H1               0.004   suppressor of variegation 3-9 homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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