Guide to the Human Genome
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Search of human proteins with 239750972

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750972 PREDICTED: hypothetical protein XP_002347620 [Homo
sapiens]
         (259 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750972 PREDICTED: hypothetical protein XP_002347620 [Homo ...   538   e-153
gi|239745378 PREDICTED: hypothetical protein XP_002343450 [Homo ...   538   e-153
gi|19111150 angiomotin isoform 2 [Homo sapiens]                        42   4e-04
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       42   4e-04
gi|83367077 mucin 16 [Homo sapiens]                                    37   0.022
gi|116268097 beta-1,3-galactosyltransferase 6 [Homo sapiens]           33   0.19 
gi|161019170 mucin 5AC [Homo sapiens]                                  33   0.25 
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]       33   0.25 
gi|239757240 PREDICTED: hypothetical protein [Homo sapiens]            33   0.32 
gi|239751748 PREDICTED: hypothetical protein [Homo sapiens]            33   0.32 
gi|239746248 PREDICTED: hypothetical protein XP_002343714 [Homo ...    33   0.32 
gi|239753316 PREDICTED: similar to Rho guanine nucleotide exchan...    32   0.42 
gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Hom...    32   0.72 
gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Hom...    32   0.72 
gi|239741039 PREDICTED: hypothetical protein LOC284498 [Homo sap...    32   0.72 
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho...    31   0.94 
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho...    31   0.94 
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho...    31   0.94 
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom...    31   0.94 
gi|134031945 SCO-spondin [Homo sapiens]                                31   0.94 
gi|63053512 keratin associated protein 10-1 [Homo sapiens]             31   0.94 
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ...    31   1.2  
gi|154759249 keratin associated protein 10-11 [Homo sapiens]           31   1.2  
gi|193804923 hypothetical protein LOC55086 [Homo sapiens]              30   2.1  
gi|153792575 hypothetical protein LOC90120 [Homo sapiens]              30   2.1  
gi|226437579 NAC alpha domain containing [Homo sapiens]                30   2.7  
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]            30   2.7  
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]     30   2.7  
gi|239752224 PREDICTED: hypothetical protein XP_002348163 [Homo ...    30   2.7  
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]     30   2.7  

>gi|239750972 PREDICTED: hypothetical protein XP_002347620 [Homo
           sapiens]
          Length = 259

 Score =  538 bits (1386), Expect = e-153
 Identities = 259/259 (100%), Positives = 259/259 (100%)

Query: 1   MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA 60
           MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA
Sbjct: 1   MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA 60

Query: 61  TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA 120
           TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA
Sbjct: 61  TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA 120

Query: 121 TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS 180
           TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS
Sbjct: 121 TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS 180

Query: 181 TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC 240
           TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC
Sbjct: 181 TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC 240

Query: 241 AGAGSACRARRSHGRTCST 259
           AGAGSACRARRSHGRTCST
Sbjct: 241 AGAGSACRARRSHGRTCST 259


>gi|239745378 PREDICTED: hypothetical protein XP_002343450 [Homo
           sapiens]
          Length = 259

 Score =  538 bits (1386), Expect = e-153
 Identities = 259/259 (100%), Positives = 259/259 (100%)

Query: 1   MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA 60
           MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA
Sbjct: 1   MTVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMA 60

Query: 61  TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA 120
           TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA
Sbjct: 61  TCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRA 120

Query: 121 TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS 180
           TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS
Sbjct: 121 TAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPS 180

Query: 181 TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC 240
           TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC
Sbjct: 181 TAPGPHTHLDDILLGVSYHGRELHQHCVRVFREDGGGCRGAVLRHQQLLHLQQAAPYLWC 240

Query: 241 AGAGSACRARRSHGRTCST 259
           AGAGSACRARRSHGRTCST
Sbjct: 241 AGAGSACRARRSHGRTCST 259


>gi|19111150 angiomotin isoform 2 [Homo sapiens]
          Length = 675

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 16/190 (8%)

Query: 10  SGEAMTSSPACS---RISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSVRL 66
           S  + T S  CS        S+ T      SVP  P  AA+T  ++ A A+ + T  V  
Sbjct: 443 SAHSKTGSRDCSTQTERGTESNKTAAVAPISVP-APVAAAATAAAITATAATITTTMVAA 501

Query: 67  SGVAMVMVSA-AAASGPS----AVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRAT 121
           + VA+   +A AAA+ PS    A +++ V+       PA A  ++     +   +   A 
Sbjct: 502 APVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAA--SVASAAAVAPSAAAAAA 559

Query: 122 AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDR-----GQPWLP 176
            Q         P P  +P+ +       + A   + +SA A A            Q  +P
Sbjct: 560 VQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVP 619

Query: 177 LGPSTAPGPH 186
             P+T PGPH
Sbjct: 620 ASPATGPGPH 629


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 16/190 (8%)

Query: 10   SGEAMTSSPACS---RISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSVRL 66
            S  + T S  CS        S+ T      SVP  P  AA+T  ++ A A+ + T  V  
Sbjct: 852  SAHSKTGSRDCSTQTERGTESNKTAAVAPISVP-APVAAAATAAAITATAATITTTMVAA 910

Query: 67   SGVAMVMVSA-AAASGPS----AVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRAT 121
            + VA+   +A AAA+ PS    A +++ V+       PA A  ++     +   +   A 
Sbjct: 911  APVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAA--SVASAAAVAPSAAAAAA 968

Query: 122  AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDR-----GQPWLP 176
             Q         P P  +P+ +       + A   + +SA A A            Q  +P
Sbjct: 969  VQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVP 1028

Query: 177  LGPSTAPGPH 186
              P+T PGPH
Sbjct: 1029 ASPATGPGPH 1038


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 36.6 bits (83), Expect = 0.022
 Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 10/162 (6%)

Query: 5    TSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSV 64
            T   PS       PA S +S+   D +VT   + P++   A  T+ +    +  +AT  V
Sbjct: 9618 TEVMPSSRTSIPGPAQSTMSLDISDEVVTRLSTSPIMTESAEITITTQTGYS--LATSQV 9675

Query: 65   RLS-GVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWC------TICCTTFMMWLST 117
             L  G +M  +S   ++    +S S +T        +L+W       T   ++ +  L  
Sbjct: 9676 TLPLGTSMTFLSGTHSTMSQGLSHSEMTNLMSRGPESLSWTSPRFVETTRSSSSLTSLPL 9735

Query: 118  CRATAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASS 159
              + +        +SP  P LP+TS+ +P ++    ++  SS
Sbjct: 9736 TTSLSPVSSTLLDSSPSSP-LPVTSLILPGLVKTTEVLDTSS 9776


>gi|116268097 beta-1,3-galactosyltransferase 6 [Homo sapiens]
          Length = 329

 Score = 33.5 bits (75), Expect = 0.19
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 108 CTTFMMWLSTCRATAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQ 167
           C   +++L+ C A     R   G SPPPPA    + ++  +++ A   +   +V  +   
Sbjct: 22  CGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRSTWL 81

Query: 168 KDRGQP---WLPLGPSTA 182
             RG P   W      TA
Sbjct: 82  ARRGAPGDVWARFAVGTA 99


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 33.1 bits (74), Expect = 0.25
 Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 37/163 (22%)

Query: 2    TVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMAT 61
            T+ T   P+G   T+S   S +  +    +VT   ++P      ASTVPS         +
Sbjct: 5175 TIATVMVPTGSTATAS---STLGTAHTPKVVTTMATMPTA---TASTVPS---------S 5219

Query: 62   CSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTIC-CTTFMMWLS---- 116
             +V  +    V+ S+      S VSSS++T      +P+  + T C C  F  + S    
Sbjct: 5220 STVGTTRTPAVLPSSLPTFSVSTVSSSVLTTLRPTGFPSSHFSTPCFCRAFGQFFSPGEV 5279

Query: 117  ----TCRATAQQERLC---------QGASP--PPP--ALPLTS 142
                T RA      +C         QGA P  PPP  + PL+S
Sbjct: 5280 IYNKTDRAGCHFYAVCNQHCDIDRFQGACPTSPPPVSSAPLSS 5322


>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
          Length = 5765

 Score = 33.1 bits (74), Expect = 0.25
 Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 37/163 (22%)

Query: 2    TVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMAT 61
            T+ T   P+G   T+S   S +  +    +VT   ++P      ASTVPS         +
Sbjct: 4856 TIATVMVPTGSTATAS---STLGTAHTPKVVTTMATMPTA---TASTVPS---------S 4900

Query: 62   CSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTIC-CTTFMMWLS---- 116
             +V  +    V+ S+      S VSSS++T      +P+  + T C C  F  + S    
Sbjct: 4901 STVGTTRTPAVLPSSLPTFSVSTVSSSVLTTLRPTGFPSSHFSTPCFCRAFGQFFSPGEV 4960

Query: 117  ----TCRATAQQERLC---------QGASP--PPP--ALPLTS 142
                T RA      +C         QGA P  PPP  + PL+S
Sbjct: 4961 IYNKTDRAGCHFYAVCNQHCDIDRFQGACPTSPPPVSSAPLSS 5003


>gi|239757240 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 5   TSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSV 64
           +S W +      S  CSR +M     M    C VP V   A   VP+     S+   C +
Sbjct: 49  SSGWKTWAPREGS-CCSRRNMEPSQRMT---CGVPNVACEAQEHVPT-----SLEVACGI 99

Query: 65  RLSGVAMVMVSAAAASGP 82
            + G+  V  S  AA+GP
Sbjct: 100 DILGLGDVCASLEAATGP 117


>gi|239751748 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 5   TSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSV 64
           +S W +      S  CSR +M     M    C VP V   A   VP+     S+   C +
Sbjct: 49  SSGWKTWAPREGS-CCSRRNMEPSQRMT---CGVPNVACEAQEHVPT-----SLEVACGI 99

Query: 65  RLSGVAMVMVSAAAASGP 82
            + G+  V  S  AA+GP
Sbjct: 100 DILGLGDVCASLEAATGP 117


>gi|239746248 PREDICTED: hypothetical protein XP_002343714 [Homo
           sapiens]
          Length = 217

 Score = 32.7 bits (73), Expect = 0.32
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 5   TSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSV 64
           +S W +      S  CSR +M     M    C VP V   A   VP+     S+   C +
Sbjct: 49  SSGWKTWAPREGS-CCSRRNMEPSQRMT---CGVPNVACEAQEHVPT-----SLEVACGI 99

Query: 65  RLSGVAMVMVSAAAASGP 82
            + G+  V  S  AA+GP
Sbjct: 100 DILGLGDVCASLEAATGP 117


>gi|239753316 PREDICTED: similar to Rho guanine nucleotide exchange
           factor 4 [Homo sapiens]
          Length = 368

 Score = 32.3 bits (72), Expect = 0.42
 Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 29/145 (20%)

Query: 99  PALAWCTICCTTFMMWLSTCRATAQQERLCQ------GASPPPPALPLTSVWV---PSMI 149
           P+ +  TI  +  +   + C A + Q+  C        A+PPPPA P  S+W+   P+ +
Sbjct: 160 PSPSQLTIGSSPLIPPRAACPAWSLQQVRCTPWTHPAAAAPPPPAQPSPSLWLELGPACV 219

Query: 150 SVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHLDDILLGVSYHGRELHQHCVR 209
                 S SS     D         L    S++ G     D    GV   G         
Sbjct: 220 RAQQCPSESSGQTSGD---------LGTSSSSSAGLSPGSDSDSSGVVCGG--------- 261

Query: 210 VFREDGGGCRGAVLRHQQLLHLQQA 234
             R   GG RGAV R   L  L+ A
Sbjct: 262 --RGGNGGMRGAVSRSWSLESLRSA 284


>gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Homo
           sapiens]
          Length = 697

 Score = 31.6 bits (70), Expect = 0.72
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 129 QGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAP 183
           QGAS PP       V++P      S  ++SSA A        G+ WLP GP   P
Sbjct: 141 QGASVPP-------VFLPRPTERVSGSASSSAGAAGQQPNGPGESWLPTGPGIGP 188


>gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Homo
           sapiens]
          Length = 697

 Score = 31.6 bits (70), Expect = 0.72
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 129 QGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAP 183
           QGAS PP       V++P      S  ++SSA A        G+ WLP GP   P
Sbjct: 141 QGASVPP-------VFLPRPTERVSGSASSSAGAAGQQPNGPGESWLPTGPGIGP 188


>gi|239741039 PREDICTED: hypothetical protein LOC284498 [Homo
           sapiens]
          Length = 697

 Score = 31.6 bits (70), Expect = 0.72
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 129 QGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAP 183
           QGAS PP       V++P      S  ++SSA A        G+ WLP GP   P
Sbjct: 141 QGASVPP-------VFLPRPTERVSGSASSSAGAAGQQPNGPGESWLPTGPGIGP 188


>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 14/57 (24%)

Query: 133 PPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHL 189
           PPPP LP   +   S ++V +L    S               L   PSTAPGPH  L
Sbjct: 427 PPPPPLPPPGIRPSSPVTVTALAHPPSG--------------LHPTPSTAPGPHVPL 469


>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 14/57 (24%)

Query: 133 PPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHL 189
           PPPP LP   +   S ++V +L    S               L   PSTAPGPH  L
Sbjct: 427 PPPPPLPPPGIRPSSPVTVTALAHPPSG--------------LHPTPSTAPGPHVPL 469


>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 14/57 (24%)

Query: 133 PPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHL 189
           PPPP LP   +   S ++V +L    S               L   PSTAPGPH  L
Sbjct: 427 PPPPPLPPPGIRPSSPVTVTALAHPPSG--------------LHPTPSTAPGPHVPL 469


>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
           sapiens]
          Length = 559

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 14/57 (24%)

Query: 133 PPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPSTAPGPHTHL 189
           PPPP LP   +   S ++V +L    S               L   PSTAPGPH  L
Sbjct: 427 PPPPPLPPPGIRPSSPVTVTALAHPPSG--------------LHPTPSTAPGPHVPL 469


>gi|134031945 SCO-spondin [Homo sapiens]
          Length = 5147

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 15/79 (18%)

Query: 116  STCRATAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQ-KDRGQPW 174
            S+C   A QE  C      PP  P+ S+W             S+  A  DG  + RG+  
Sbjct: 2810 SSCPGDATQEEPCS-----PPVCPVPSIW-------GLWAPWSTCSAPCDGGIQTRGRSC 2857

Query: 175  LPLGP--STAPGPHTHLDD 191
              L P  +T PGPH+   D
Sbjct: 2858 SSLAPGDTTCPGPHSQTRD 2876


>gi|63053512 keratin associated protein 10-1 [Homo sapiens]
          Length = 282

 Score = 31.2 bits (69), Expect = 0.94
 Identities = 37/157 (23%), Positives = 54/157 (34%), Gaps = 27/157 (17%)

Query: 18  PACSRISMSSDDTMVTVACS-VPLVPA---------RAASTVPSLMAEASVMATCSV--R 65
           P C   S S     V V C  V  VP          + +S  P+    +     C V  R
Sbjct: 129 PTCCASSSSQQSCCVPVCCKPVCYVPTCSEDSSSCCQQSSCHPACCTSSPCQQACCVPVR 188

Query: 66  LSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTTFMMWLSTCRATAQQE 125
              V    +        ++ S    + C     PA      CCTT     S CR ++   
Sbjct: 189 CKPVCCKPICCVPVCSGASTSCCQQSSCQ----PA------CCTT-----SCCRPSSSVS 233

Query: 126 RLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVA 162
            LC+    P   +P++S   P+    AS    +S V+
Sbjct: 234 LLCRPVCRPACCMPVSSCCAPASSCQASCCRPASCVS 270


>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
           sapiens]
          Length = 935

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 134 PPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGP 179
           PPP     ++ +P M + A+  +A+      DGQ DR +PW P  P
Sbjct: 714 PPPCHKSPALKLPGMTTGATTQTATLP----DGQTDRARPWSPPAP 755


>gi|154759249 keratin associated protein 10-11 [Homo sapiens]
          Length = 298

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 4   CTSSWPSGEAMTSSPACSRISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCS 63
           CTSS P  +A    P C +         V V C       R +S  P+  A +S    C 
Sbjct: 90  CTSS-PCQQACCV-PVCCKTVCCKPVCCVPVCCGAASSCCRQSSCQPACCASSSCQPACC 147

Query: 64  VRLSGVAMVMVSAAAASGPSAV--SSSMVTFCTMIWWPALAWCTICCTT 110
           V +    +  VS  +    S    SS     CT   +       +CC T
Sbjct: 148 VPVCCKPVCCVSTCSEDSSSCCQQSSCQPACCTSSSYQQACCVPVCCKT 196


>gi|193804923 hypothetical protein LOC55086 [Homo sapiens]
          Length = 855

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 111 FMMWLSTCRATAQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAV 161
           F+ W+ T   + +Q+ +  G   P P +P T     S I V SL++A S V
Sbjct: 485 FIQWIRTKSDSGEQKNMVIGGYYPYPPVPETFSKYSSSIKVESLLTAISEV 535


>gi|153792575 hypothetical protein LOC90120 [Homo sapiens]
          Length = 135

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 18  PACSR-ISMSSDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSVRLSGVAMVMVSA 76
           PAC R     +  T    + +     +R A    S  + +++ A CS+R SGV     SA
Sbjct: 44  PACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSA 103

Query: 77  AAA-SGPSAVSSSMVTFCTMIWWPALAW 103
            +  +  S  +SS    C    W A AW
Sbjct: 104 YSTWAFASCCASSASCRCCCCCWAAGAW 131


>gi|226437579 NAC alpha domain containing [Homo sapiens]
          Length = 1562

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)

Query: 122  AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPST 181
            A++ER   G S P P LP       ++ + ASL S   +   A    DRG P  P  P++
Sbjct: 1123 AREERGLSGKSTPEPTLP------SAVATEASLDSCPESSVGAVSSLDRGCPDAP-APTS 1175

Query: 182  AP 183
            AP
Sbjct: 1176 AP 1177


>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1230

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 47/200 (23%), Positives = 68/200 (34%), Gaps = 19/200 (9%)

Query: 2   TVCTSSWPSGEAMTSSPACSRISMSSDDTMVTVACS-VPLVPARAASTVPSLMAEASV-- 58
           T   S W S  A   SP+ S  S SSD    + + S V    +RA+++  S  A +S   
Sbjct: 219 TPSDSGWASSSASCISPSASGASTSSDSGWASPSASWVSTSTSRASTSSDSGWASSSASW 278

Query: 59  --------MATCSVRLSGVAMVMVSAAAASGPSAVSSSMVTFCTMIWWPALAWCTICCTT 110
                       S   +  +    SA + SG S+ S S  +  ++  W + +       +
Sbjct: 279 DSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSVSRASTLSVSGWASFSASGASAPS 338

Query: 111 FMMWLSTCRATAQQERLCQGASPPPPALPLT--SVWVPSMIS----VASLVSASSAVAWA 164
              W S   +          ASP       +  S W     S     AS  S  S   WA
Sbjct: 339 DSGWTSHSASGVSTTSDSGWASPSASGASTSSDSGWASPSASWASPSASGASTPSDSGWA 398

Query: 165 DGQKDRGQPWLPLGPSTAPG 184
                     +P  PS  PG
Sbjct: 399 SPSASGAS--MPSAPSLCPG 416


>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)

Query: 122  AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPST 181
            A++ER   G S P P LP       ++ + ASL S   +   A    DRG P  P  P++
Sbjct: 1083 AREERGLSGKSTPEPTLP------SAVATEASLDSCPESSVGAVSSLDRGCPDAP-APTS 1135

Query: 182  AP 183
            AP
Sbjct: 1136 AP 1137


>gi|239752224 PREDICTED: hypothetical protein XP_002348163 [Homo
           sapiens]
          Length = 284

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 17/136 (12%)

Query: 16  SSPACSRISMS-------SDDTMVTVACSVPLVPARAASTVPSLMAEASVMATCSVRLSG 68
           S PACS  + +       S  +   + C  P  P R  S+ P  +  +S     S+ L+ 
Sbjct: 15  SPPACSLPTAAPAPPLRPSPSSKTVLGCQAP--PRRPPSSTPCPLLTSSPSPLPSLLLTA 72

Query: 69  VAMVMVSAAAASGPSAVSSSMVTFCTMIWW---PALAWCTI-CCTTFMMWLSTCRATAQQ 124
            A         +      S    FC ++     P    C++  C TF    S+    A  
Sbjct: 73  AAQESAVGLLTASLLKGDSGSTGFCPLLMSLAAPGTQQCSLGFCCTFERKRSSVSPAAPG 132

Query: 125 E----RLCQGASPPPP 136
           +     L  GA+PPPP
Sbjct: 133 KIGGVSLAVGAAPPPP 148


>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)

Query: 122  AQQERLCQGASPPPPALPLTSVWVPSMISVASLVSASSAVAWADGQKDRGQPWLPLGPST 181
            A++ER   G S P P LP       ++ + ASL S   +   A    DRG P  P  P++
Sbjct: 1083 AREERGLSGKSTPEPTLP------SAVATEASLDSCPESSVGAVSSLDRGCPDAP-APTS 1135

Query: 182  AP 183
            AP
Sbjct: 1136 AP 1137


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.127    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,568,657
Number of Sequences: 37866
Number of extensions: 553957
Number of successful extensions: 2346
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2289
Number of HSP's gapped (non-prelim): 89
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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