Search of human proteins with 239750660

Search of human proteins with 239750660

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750660 PREDICTED: hypothetical protein [Homo sapiens]
         (168 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756131 PREDICTED: hypothetical protein XP_002344814 [Homo ...   342   7e-95
gi|239750660 PREDICTED: hypothetical protein [Homo sapiens]           342   7e-95
gi|239744968 PREDICTED: hypothetical protein XP_002343345 [Homo ...   341   2e-94
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            40   0.001
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ...    35   0.023
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]            35   0.023
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    35   0.040
gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]            33   0.12 
gi|54607124 RNA binding motif protein 15B [Homo sapiens]               33   0.12 
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]            33   0.15 
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]            33   0.15 
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]            33   0.15 
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|239746532 PREDICTED: ankyrin repeat domain 60 [Homo sapiens]        31   0.44 
gi|4505531 oxysterol binding protein [Homo sapiens]                    31   0.44 
gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens]          31   0.44 
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            31   0.57 
gi|29570782 additional sex combs like 1 [Homo sapiens]                 31   0.57 
gi|197313672 carnitine deficiency-associated gene expressed in v...    31   0.57 
gi|8923710 carnitine deficiency-associated gene expressed in ven...    31   0.57 
gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo ...    30   0.75 
gi|239752795 PREDICTED: similar to transmembrane protein 125 [Ho...    30   0.75 
gi|239747324 PREDICTED: hypothetical protein XP_002346440 [Homo ...    30   0.75 
gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo ...    30   0.75 
gi|239741149 PREDICTED: hypothetical protein XP_002342147 [Homo ...    30   0.75 
gi|23821044 zinc finger/RING finger 2 [Homo sapiens]                   30   0.97 

>gi|239756131 PREDICTED: hypothetical protein XP_002344814 [Homo
           sapiens]
          Length = 168

 Score =  342 bits (878), Expect = 7e-95
 Identities = 168/168 (100%), Positives = 168/168 (100%)

Query: 1   MARARSTDSFLLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIE 60
           MARARSTDSFLLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIE
Sbjct: 1   MARARSTDSFLLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIE 60

Query: 61  AVPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA 120
           AVPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA
Sbjct: 61  AVPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA 120

Query: 121 GSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHRVALPIKA 168
           GSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHRVALPIKA
Sbjct: 121 GSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHRVALPIKA 168


>gi|239750660 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 168

 Score =  342 bits (878), Expect = 7e-95
 Identities = 168/168 (100%), Positives = 168/168 (100%)

Query: 1   MARARSTDSFLLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIE 60
           MARARSTDSFLLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIE
Sbjct: 1   MARARSTDSFLLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIE 60

Query: 61  AVPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA 120
           AVPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA
Sbjct: 61  AVPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA 120

Query: 121 GSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHRVALPIKA 168
           GSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHRVALPIKA
Sbjct: 121 GSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHRVALPIKA 168


>gi|239744968 PREDICTED: hypothetical protein XP_002343345 [Homo
           sapiens]
          Length = 168

 Score =  341 bits (874), Expect = 2e-94
 Identities = 167/168 (99%), Positives = 167/168 (99%)

Query: 1   MARARSTDSFLLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIE 60
           MARARSTDSFLLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIE
Sbjct: 1   MARARSTDSFLLRASQAAGATGSDQRKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIE 60

Query: 61  AVPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA 120
           AVPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRER TPTGGGA
Sbjct: 61  AVPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERTTPTGGGA 120

Query: 121 GSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHRVALPIKA 168
           GSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHRVALPIKA
Sbjct: 121 GSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHRVALPIKA 168


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 21/167 (12%)

Query: 1   MARARSTDSFLLRASQAAGATGSDQRKRPRR---STSPLSSRVSHTPATCWGLKFKMGSW 57
           + ++RS D       Q A  TG+  RK+P R     +  + +   T AT  G   K   W
Sbjct: 604 VTKSRSGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRW 663

Query: 58  NIEAVP----AAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNG--RE 111
              A      +AA A+  E + ++ P       RR   R  G      G   W     + 
Sbjct: 664 QKPAAAGSESSAAAAVGQEAEARKKPR-----RRRAKSRGDGGQNAAVGINPWQRRGKKP 718

Query: 112 RATPTGGGAGSAAWGSGSARLR-------HAGRRAGSAIGVGGLAAR 151
           R   + GG G+ + GSG A+ R        +G++A ++   GG  A+
Sbjct: 719 RLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAK 765



 Score = 31.6 bits (70), Expect = 0.33
 Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 15/144 (10%)

Query: 18  AGATGSDQRKRPRRSTSPLSSRV------SHTPATCWGLKFKMGSWNIEAVPAAARALSP 71
           AGA     +K+ R+  S   ++       SH+    W    K  +   +A  A A++   
Sbjct: 464 AGAESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGR 523

Query: 72  ERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGAGSAAWGSGSAR 131
           ++  +Q PA     +R          G +   +R       AT  GGG    + G G  +
Sbjct: 524 KQPRRQKPAVAGAKSR---------VGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNK 574

Query: 132 LRHAGRRAGSAIGVGGLAARAPWR 155
            R  G+ A +A   GG   +  W+
Sbjct: 575 PRQWGQTAAAAKTRGGGDKQPGWQ 598



 Score = 28.5 bits (62), Expect = 2.8
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 92  RRIGAAGHTTGWRRWLNGRERATPTGGGAGSAAWGSGSARLRHAGRRAGSAIGVG 146
           +R GAA  T G +    GR    P   G  +  WG G  + R  G++A  A   G
Sbjct: 287 KRRGAA--TAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAG 339


>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
           sapiens]
          Length = 231

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 41/132 (31%), Positives = 47/132 (35%), Gaps = 13/132 (9%)

Query: 28  RPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIEAVPAAARALSPERDTQQMPAGLAECAR 87
           R R S S  SSR S  P  C   + +  +    A  A A A SP  DT + P    E A 
Sbjct: 26  RMRNSNSRPSSRASAGPGLC---RTEAAAAATRAGAAPATAESP--DTPEEPP--EEPAP 78

Query: 88  RLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA------GSAAWGSGSARLRHAGRRAGS 141
            +     G  G   G + W  GR      G GA      G         R R   RR G 
Sbjct: 79  AIAPGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGG 138

Query: 142 AIGVGGLAARAP 153
             G G   AR P
Sbjct: 139 RGGRGAGRARKP 150


>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 41/132 (31%), Positives = 47/132 (35%), Gaps = 13/132 (9%)

Query: 28  RPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIEAVPAAARALSPERDTQQMPAGLAECAR 87
           R R S S  SSR S  P  C   + +  +    A  A A A SP  DT + P    E A 
Sbjct: 26  RMRNSNSRPSSRASAGPGLC---RTEAAAAATRAGAAPATAESP--DTPEEPP--EEPAP 78

Query: 88  RLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA------GSAAWGSGSARLRHAGRRAGS 141
            +     G  G   G + W  GR      G GA      G         R R   RR G 
Sbjct: 79  AIAPGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGG 138

Query: 142 AIGVGGLAARAP 153
             G G   AR P
Sbjct: 139 RGGRGAGRARKP 150


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 109 GRERATPTGGGAGSAAWGSGSARLRHAGRRAGSAIGVGG 147
           GR R    GGG G    G+G+ R+R A RR G A G GG
Sbjct: 22  GRPRGA--GGGGGRGGRGNGAERVRVALRRGGGATGPGG 58


>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 228

 Score = 33.1 bits (74), Expect = 0.12
 Identities = 37/133 (27%), Positives = 45/133 (33%), Gaps = 18/133 (13%)

Query: 28  RPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIEAVPAAARAL-SPERDTQQMPAGLAECA 86
           R R S S  SSR S  P  C   +    +    A PA A +  +PE   ++    +A   
Sbjct: 26  RMRNSNSRPSSRASAGPGLC-RTEAAAAATRAGAAPATAESPDTPEEPPEEPAPAIAP-- 82

Query: 87  RRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGA------GSAAWGSGSARLRHAGRRAG 140
                   G  G   G + W  GR      G GA      G         R R   RR G
Sbjct: 83  --------GGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRG 134

Query: 141 SAIGVGGLAARAP 153
              G G   AR P
Sbjct: 135 GRGGRGAGRARKP 147


>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
          Length = 890

 Score = 33.1 bits (74), Expect = 0.12
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 7/97 (7%)

Query: 64  AAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGAGSA 123
           +++ A  P    ++  AG     RR   +  G A H    R     + R + +GGG    
Sbjct: 16  SSSSAKRPREREREAEAG----GRRAAHKASGGAKHPVPARA--RDKPRGSGSGGGGHRD 69

Query: 124 AWGSGSARLR-HAGRRAGSAIGVGGLAARAPWRPPVS 159
             G+G A  R  +GR +GS  G GG   +A   P  S
Sbjct: 70  GRGTGDANHRASSGRSSGSGAGGGGRGGKASGDPGAS 106


>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 499

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 100 TTGWRRWLNGRERATPTGGGAGSAAWGSGSARLRHAGRRAGSAI-GVGGLAARAP 153
           T GWRR  +  +   P  GG+G+A  G+G  R+ H G    S +  +GG    AP
Sbjct: 123 TAGWRRHHSTGQPGAPVLGGSGTA--GNGGQRVSHRGICGPSPLQRLGGSTGEAP 175


>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 499

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 100 TTGWRRWLNGRERATPTGGGAGSAAWGSGSARLRHAGRRAGSAI-GVGGLAARAP 153
           T GWRR  +  +   P  GG+G+A  G+G  R+ H G    S +  +GG    AP
Sbjct: 123 TAGWRRHHSTGQPGAPVLGGSGTA--GNGGQRVSHRGICGPSPLQRLGGSTGEAP 175


>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 536

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 100 TTGWRRWLNGRERATPTGGGAGSAAWGSGSARLRHAGRRAGSAI-GVGGLAARAP 153
           T GWRR  +  +   P  GG+G+A  G+G  R+ H G    S +  +GG    AP
Sbjct: 160 TAGWRRHHSTGQPGAPVLGGSGTA--GNGGQRVSHRGICGPSPLQRLGGSTGEAP 212


>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1128

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 67  RALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGAGSAAWG 126
           R ++P     + PAG    +   L+  +   G      R   G E     GGG G    G
Sbjct: 388 RGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVR-G 446

Query: 127 SGSARLRHAGRRA---GSAIGVGGLAARAPWRPPVSHRVA 163
            GS   +  GR A    +  G  G  A++   P V  RVA
Sbjct: 447 GGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVA 486


>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 801

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 67  RALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGAGSAAWG 126
           R ++P     + PAG    +   L+  +   G      R   G E     GGG G    G
Sbjct: 61  RGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVR-G 119

Query: 127 SGSARLRHAGRRA---GSAIGVGGLAARAPWRPPVSHRVA 163
            GS   +  GR A    +  G  G  A++   P V  RVA
Sbjct: 120 GGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVA 159


>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 10/104 (9%)

Query: 62  VPAAARALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRW----LNGRERATPTG 117
           +P+A+  L        +P G+ + A        GA    T  R W    L G  +    G
Sbjct: 52  LPSASSKLRVFTGYFSVPHGVGKSAGAAAGEEGGARLQAT--RTWPAGILEGGPQVAARG 109

Query: 118 GGAGSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWRPPVSHR 161
           GG G    G G+ R   A RR G++  + G     PWR     R
Sbjct: 110 GGRGWEGGGLGARRAVTAARRGGASRPLAG----EPWREAARRR 149


>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 801

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 67  RALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGAGSAAWG 126
           R ++P     + PAG    +   L+  +   G      R   G E     GGG G    G
Sbjct: 61  RGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVR-G 119

Query: 127 SGSARLRHAGRRA---GSAIGVGGLAARAPWRPPVSHRVA 163
            GS   +  GR A    +  G  G  A++   P V  RVA
Sbjct: 120 GGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVA 159


>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 801

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 67  RALSPERDTQQMPAGLAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGAGSAAWG 126
           R ++P     + PAG    +   L+  +   G      R   G E     GGG G    G
Sbjct: 61  RGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVR-G 119

Query: 127 SGSARLRHAGRRA---GSAIGVGGLAARAPWRPPVSHRVA 163
            GS   +  GR A    +  G  G  A++   P V  RVA
Sbjct: 120 GGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVA 159


>gi|239746532 PREDICTED: ankyrin repeat domain 60 [Homo sapiens]
          Length = 345

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 101 TGWRRWLNGRERATPTGGGAGSAAWGSGSARLR-HAGRRAGSAIGVGG 147
           T  R W  G  RA    GGA +A    G++RL  +AGRR+G+  G  G
Sbjct: 2   TRGRAW--GMRRAAAGAGGARAAGPTGGASRLHPNAGRRSGARAGAQG 47


>gi|4505531 oxysterol binding protein [Homo sapiens]
          Length = 807

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 15/23 (65%), Positives = 15/23 (65%)

Query: 109 GRERATPTGGGAGSAAWGSGSAR 131
           G   A PTGG  GS A GSGSAR
Sbjct: 69  GPAPAPPTGGSGGSGAGGSGSAR 91



 Score = 28.5 bits (62), Expect = 2.8
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 117 GGGAGSAAWGSGSAR-LRHAGRRAGSAIGVGGLAARAPWRPP 157
           GGG G A  GSG+A     A    G   G GG+AA  P   P
Sbjct: 33  GGGRGDAGPGSGAASGTVVAAAAGGPGPGAGGVAAAGPAPAP 74


>gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens]
          Length = 501

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 18/119 (15%)

Query: 26  RKRPRRSTSPLSSRVSHTPATCWGLKFKMGSWNIEAVPAAARALSPERDTQQMPAGLAEC 85
           R   RR+  P  +     PA C  L      W I   P   RA   +   +    G    
Sbjct: 35  RPSRRRTRPPRPADRRDAPADCAYL------WRI-LTPRRGRARRSDVGARHRACG---- 83

Query: 86  ARRLLMRRIGAAGHTTGWRRWLNGRERATPT--GGGAGS----AAWGSGSARLRHAGRR 138
            R +L+ R G A +  G RR + G+ER  P    G  GS     +W  G   LR AGRR
Sbjct: 84  RRDVLLSRQGPA-NPEGARRVVGGQERVWPAVRRGRGGSMFRLLSWSLGRGFLRAAGRR 141


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 30.8 bits (68), Expect = 0.57
 Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 9/46 (19%)

Query: 115 PTGGG-----AGSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWR 155
           P  GG     A SAAWG  +   R AGRRAG A    G   RAP R
Sbjct: 69  PGAGGPLCFPARSAAWGPPARASRAAGRRAGPA----GPPCRAPGR 110


>gi|29570782 additional sex combs like 1 [Homo sapiens]
          Length = 1541

 Score = 30.8 bits (68), Expect = 0.57
 Identities = 28/72 (38%), Positives = 30/72 (41%), Gaps = 10/72 (13%)

Query: 82  LAECARRLLMRRIGAAGHTTGWRRWLNGRERATPTGGGAGSAAWGSGSARLRHAGRRAGS 141
           LA+   R L  R GA GH          RE AT   GG G    G G A     GR  GS
Sbjct: 614 LADIKARALQVR-GARGHHCH-------REAATTAIGGGGGPGGGGGGATDEGGGR--GS 663

Query: 142 AIGVGGLAARAP 153
           + G GG A   P
Sbjct: 664 SSGDGGEACGHP 675


>gi|197313672 carnitine deficiency-associated gene expressed in
           ventricle 3 isoform a [Homo sapiens]
          Length = 213

 Score = 30.8 bits (68), Expect = 0.57
 Identities = 17/39 (43%), Positives = 20/39 (51%)

Query: 112 RATPTGGGAGSAAWGSGSARLRHAGRRAGSAIGVGGLAA 150
           RA    G AGSA   SG+A     G  AG+  G GG A+
Sbjct: 27  RAASAAGAAGSAGGSSGAAGAAGGGAGAGTRPGDGGTAS 65


>gi|8923710 carnitine deficiency-associated gene expressed in
           ventricle 3 isoform b [Homo sapiens]
          Length = 258

 Score = 30.8 bits (68), Expect = 0.57
 Identities = 17/39 (43%), Positives = 20/39 (51%)

Query: 112 RATPTGGGAGSAAWGSGSARLRHAGRRAGSAIGVGGLAA 150
           RA    G AGSA   SG+A     G  AG+  G GG A+
Sbjct: 27  RAASAAGAAGSAGGSSGAAGAAGGGAGAGTRPGDGGTAS 65


>gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo
           sapiens]
          Length = 252

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 17/49 (34%), Positives = 21/49 (42%)

Query: 107 LNGRERATPTGGGAGSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWR 155
           L GR RA P    AG    GSG+  L    + A         A+R PW+
Sbjct: 164 LAGRPRAPPPAPAAGQRGLGSGALGLGRREKLAARPAATPRRASRPPWQ 212


>gi|239752795 PREDICTED: similar to transmembrane protein 125
          [Homo sapiens]
          Length = 145

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 29/93 (31%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 7  TDSFLLRASQAAGATGSDQRKRP-RRSTSPLSS--RVSHTP-----ATCWGLKFKMGSWN 58
          TDS        AGA  S  R RP   ST PLSS  R S  P     AT W  + +  S  
Sbjct: 3  TDSMAASGRAGAGAAASPARVRPVTSSTRPLSSTTRASAPPPLRSRATWWAWRMQFMSCT 62

Query: 59 IEAVPAAARALSPERDTQQMPAGLAECARRLLM 91
           E +    R     + +  +P        RLL+
Sbjct: 63 AELISCFTRTSRASKQS-TVPVASRHSPERLLV 94


>gi|239747324 PREDICTED: hypothetical protein XP_002346440 [Homo
          sapiens]
          Length = 145

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 29/93 (31%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 7  TDSFLLRASQAAGATGSDQRKRP-RRSTSPLSS--RVSHTP-----ATCWGLKFKMGSWN 58
          TDS        AGA  S  R RP   ST PLSS  R S  P     AT W  + +  S  
Sbjct: 3  TDSMAASGRAGAGAAASPARVRPVTSSTRPLSSTTRASAPPPLRSRATWWAWRMQFMSCT 62

Query: 59 IEAVPAAARALSPERDTQQMPAGLAECARRLLM 91
           E +    R     + +  +P        RLL+
Sbjct: 63 AELISCFTRTSRASKQS-TVPVASRHSPERLLV 94


>gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo
           sapiens]
          Length = 252

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 17/49 (34%), Positives = 21/49 (42%)

Query: 107 LNGRERATPTGGGAGSAAWGSGSARLRHAGRRAGSAIGVGGLAARAPWR 155
           L GR RA P    AG    GSG+  L    + A         A+R PW+
Sbjct: 164 LAGRPRAPPPAPAAGQRGLGSGALGLGRREKLAARPAATPRRASRPPWQ 212


>gi|239741149 PREDICTED: hypothetical protein XP_002342147 [Homo
          sapiens]
          Length = 145

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 29/93 (31%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 7  TDSFLLRASQAAGATGSDQRKRP-RRSTSPLSS--RVSHTP-----ATCWGLKFKMGSWN 58
          TDS        AGA  S  R RP   ST PLSS  R S  P     AT W  + +  S  
Sbjct: 3  TDSMAASGRAGAGAAASPARVRPVTSSTRPLSSTTRASAPPPLRSRATWWAWRMQFMSCT 62

Query: 59 IEAVPAAARALSPERDTQQMPAGLAECARRLLM 91
           E +    R     + +  +P        RLL+
Sbjct: 63 AELISCFTRTSRASKQS-TVPVASRHSPERLLV 94


>gi|23821044 zinc finger/RING finger 2 [Homo sapiens]
          Length = 242

 Score = 30.0 bits (66), Expect = 0.97
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 8/63 (12%)

Query: 102 GWRRWLNGRERATPTGGGAGSAAWGSGSARLRHAGR--------RAGSAIGVGGLAARAP 153
           G  R  +G +  + + GGA   A G G AR   AGR           SA G    AA AP
Sbjct: 13  GRTRAYSGSDLPSSSSGGANGTAGGGGGARAAAAGRFPAQVPSAHQPSASGGAAAAAAAP 72

Query: 154 WRP 156
             P
Sbjct: 73  AAP 75


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.129    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,866,515
Number of Sequences: 37866
Number of extensions: 328228
Number of successful extensions: 2330
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 2172
Number of HSP's gapped (non-prelim): 235
length of query: 168
length of database: 18,247,518
effective HSP length: 95
effective length of query: 73
effective length of database: 14,650,248
effective search space: 1069468104
effective search space used: 1069468104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.