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Search of human proteins with 239750506
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
(325 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 664 0.0
gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 664 0.0
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 613 e-176
gi|157671951 solute carrier family 4, anion exchanger, member 3 ... 55 6e-08
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 54 2e-07
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 50 2e-06
gi|119395716 forkhead box C1 [Homo sapiens] 50 2e-06
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 50 3e-06
gi|21361699 sphingosine kinase 2 [Homo sapiens] 49 5e-06
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 48 1e-05
gi|126090909 engrailed homeobox 1 [Homo sapiens] 47 2e-05
gi|157671953 solute carrier family 4, anion exchanger, member 3 ... 47 2e-05
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 47 3e-05
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 47 3e-05
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 47 3e-05
gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo sap... 46 4e-05
gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo sap... 46 4e-05
gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo sap... 46 4e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 46 4e-05
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 46 5e-05
gi|33286436 gametogenetin [Homo sapiens] 46 5e-05
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 45 7e-05
gi|145309306 scavenger receptor class F, member 1 isoform 5 prec... 45 7e-05
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 45 9e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 9e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 45 9e-05
gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens] 45 9e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 1e-04
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 664 bits (1712), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MLRAPKSLNKDEAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPS 60
MLRAPKSLNKDEAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPS
Sbjct: 1 MLRAPKSLNKDEAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPS 60
Query: 61 SPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARG 120
SPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARG
Sbjct: 61 SPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARG 120
Query: 121 PCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLG 180
PCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLG
Sbjct: 121 PCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLG 180
Query: 181 PGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLIL 240
PGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLIL
Sbjct: 181 PGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLIL 240
Query: 241 SVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASS 300
SVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASS
Sbjct: 241 SVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASS 300
Query: 301 SAAARGAAAATTIDGGGKEDAAGAG 325
SAAARGAAAATTIDGGGKEDAAGAG
Sbjct: 301 SAAARGAAAATTIDGGGKEDAAGAG 325
>gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo
sapiens]
Length = 325
Score = 664 bits (1712), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MLRAPKSLNKDEAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPS 60
MLRAPKSLNKDEAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPS
Sbjct: 1 MLRAPKSLNKDEAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPS 60
Query: 61 SPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARG 120
SPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARG
Sbjct: 61 SPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARG 120
Query: 121 PCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLG 180
PCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLG
Sbjct: 121 PCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLG 180
Query: 181 PGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLIL 240
PGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLIL
Sbjct: 181 PGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLIL 240
Query: 241 SVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASS 300
SVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASS
Sbjct: 241 SVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASS 300
Query: 301 SAAARGAAAATTIDGGGKEDAAGAG 325
SAAARGAAAATTIDGGGKEDAAGAG
Sbjct: 301 SAAARGAAAATTIDGGGKEDAAGAG 325
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 613 bits (1580), Expect = e-176
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 27 TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 86
TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL
Sbjct: 9 TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 68
Query: 87 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPAR 146
AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPAR
Sbjct: 69 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPAR 128
Query: 147 KTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ 206
KTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ
Sbjct: 129 KTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQ 188
Query: 207 GDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGH 266
GDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGH
Sbjct: 189 GDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGH 248
Query: 267 HRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG 325
HRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG
Sbjct: 249 HRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG 307
>gi|157671951 solute carrier family 4, anion exchanger, member 3
isoform 1 [Homo sapiens]
Length = 1232
Score = 55.5 bits (132), Expect = 6e-08
Identities = 70/266 (26%), Positives = 98/266 (36%), Gaps = 47/266 (17%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHPPSSP-PPLHITPVLPPTFP--------------- 76
P P+ ++ R HT H T HP S+ PP H LPPT
Sbjct: 59 PEKPSRSYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPPTSARHTRRKRKKEKTSAP 118
Query: 77 ---GTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSG 133
GT P + A E ++EE ++ P+ PP G +GS
Sbjct: 119 PSEGTPPIQEEGGAGVDEEEEEEEEEEGESEAEPVEPP---PSGTPQKAKFSIGSDEDDS 175
Query: 134 PGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGS 193
PGLP AA + + P + +SP +SS+ PR RL G RP SP+
Sbjct: 176 PGLPGRAAV--TKPLPSVGPHTDKSPQHSSSS---PSPRARASRLAGEKSRPWSPSASYD 230
Query: 194 RRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYR 253
R+ A G+PGG Q++ EA ++ S ++ H
Sbjct: 231 LRER-------------LCPGSALGNPGGP--EQQVPTDEAEAQMLGSADLDDMKSHRLE 275
Query: 254 RPAGDTPDPRRGHHRHRRRQRGGGRG 279
D P RR H + + GGRG
Sbjct: 276 ----DNPGVRR-HLVKKPSRTQGGRG 296
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 53.5 bits (127), Expect = 2e-07
Identities = 52/185 (28%), Positives = 70/185 (37%), Gaps = 27/185 (14%)
Query: 16 VRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTF 75
+R S R H T T P +P P R P T P + P P
Sbjct: 94 MRASGRPHGNTTASTAPPRHPRP------RRPGGPALRPTPRPCAGPAPP---------- 137
Query: 76 PGTQPPRALRLAEGSGEGKQEEGRRAQA-RPRPLRPPWEVRGGA----RGPCSAPVGSRA 130
P ++ R R G++ GRRA A +P W RG R C+ G+R
Sbjct: 138 PASRDCRCRRPRRWPRAGRR--GRRAGACKPSCAGAAWSARGAPLCSYRTSCAGSCGART 195
Query: 131 SSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPAR 190
+ P P+ A+ A + + R+ SP TA S CG+GP G+P S A
Sbjct: 196 APTPA-PTCASPSAAASSCCRRRRACSSPTTAWSGACGAGPTAATA---AQPGKPRSAAA 251
Query: 191 DGSRR 195
G R
Sbjct: 252 PGRAR 256
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 50.4 bits (119), Expect = 2e-06
Identities = 49/146 (33%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 51 TPHATAHP-PSSPPPLHITPVL-PPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPL 108
TPH + P PSSPPP +L PP P A R A GE +E + PRP
Sbjct: 456 TPHLSLPPGPSSPPPPPCPRLLRPPPPPAWLKGPACRAAREDGEILEELFFGTEGPPRPA 515
Query: 109 RPPWEVRGGARGPCSA--PVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAG 166
PP R G GP ++ VG++ S P P T S ++S AG
Sbjct: 516 PPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPT--------TSSSNSNSGSHSSSPAG 567
Query: 167 CGSGPRVPQV-RLLGPGGRPSSPARD 191
S P P + R + P RP SPA++
Sbjct: 568 PVSFPPPPYLARSIDPLPRPPSPAQN 593
Score = 42.0 bits (97), Expect = 7e-04
Identities = 60/266 (22%), Positives = 84/266 (31%), Gaps = 35/266 (13%)
Query: 58 PPSSPPPLHITPVLPPTFPGTQPP----------RALRLAEGSGEGKQEEGRRAQARPRP 107
PP+ PPP + PP+ P PP + EG + G RP P
Sbjct: 772 PPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLASVLEGQKYCYRGTGAAVSTRPGP 831
Query: 108 LRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGC 167
L G G + P S A S G P +A+ ++ + + P + E A
Sbjct: 832 LPTTQYSPGPPSGATALPPTSAAPSAQGSPQPSASSSSQFSTSGGPWARERRAGEEPVPG 891
Query: 168 GSGPRVPQVRLLGPGGRPSSPARDGSRR-------KAGHGCTSQSQGDAVAMEAEARGSP 220
P P L P R S + R + G T + A A++
Sbjct: 892 PMTPTQPPPPLSLPPARSESEVLEEISRACETLVERVGRSATDPADPVDTAEPADSG--- 948
Query: 221 GGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGG 280
E L P +A VAAV +G ++ H + RR R +
Sbjct: 949 ------TERLLPPAQAKEEAGGVAAV---------SGSCKRRQKEHQKEHRRHRRACKDS 993
Query: 281 GGRGGREAAATVHGNAAASSSAAARG 306
GR RE A S G
Sbjct: 994 VGRRPREGRAKAKAKVPKEKSRRVLG 1019
Score = 32.7 bits (73), Expect = 0.45
Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 22/75 (29%)
Query: 14 GDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSH-----TPHATAHPPSSPPPLHIT 68
GD G ER+ S AP +RH L H P TAHPP +
Sbjct: 287 GDAWGPERKGS------------APPERQEQRHSLPHPYPYPAPAYTAHPPGH----RLV 330
Query: 69 PVLPPTFPGTQPPRA 83
P PP PG +PP A
Sbjct: 331 PAAPPG-PGPRPPGA 344
Score = 30.0 bits (66), Expect = 2.9
Identities = 44/171 (25%), Positives = 52/171 (30%), Gaps = 42/171 (24%)
Query: 12 EAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVL 71
E G G +RR + +T +P P PP PPP P
Sbjct: 220 EEGLSPGGKRRRGCNSEQTGLP------------------PGLPLPPPPLPPPPPPPPPP 261
Query: 72 PPTFPG--TQPPRAL------RLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCS 123
PP PG T PP L G G + +G R E R P
Sbjct: 262 PPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSAPPERQ-------EQRHSLPHPYP 314
Query: 124 APVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVP 174
P + + PG AA P PR P A S GC R P
Sbjct: 315 YPAPAYTAHPPGHRLVPAAPPGP-----GPR----PPGAESHGCLPATRPP 356
Score = 28.5 bits (62), Expect = 8.5
Identities = 35/150 (23%), Positives = 46/150 (30%), Gaps = 15/150 (10%)
Query: 22 RHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLH----ITPVLPPTFPG 77
R S T+ +H P P T + A P S PPP + I P+ P P
Sbjct: 532 RFSVGTQDSHTPPTPPTPTTSSSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPA 591
Query: 78 TQP------PRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRAS 131
P P L L + + RP RP P G +
Sbjct: 592 QNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGPPPGPLSK 651
Query: 132 SGPGLPSAAAARPARKTLTCQPRSIESPAT 161
+ +P PAR PR + P T
Sbjct: 652 APQPVPPGVGELPAR-----GPRLFDFPPT 676
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 50.4 bits (119), Expect = 2e-06
Identities = 61/212 (28%), Positives = 77/212 (36%), Gaps = 16/212 (7%)
Query: 104 RPRPLRPPWEVRGGARGPCSAPVGSR-------ASSGPGLPSAAAARPARKTLTCQPRSI 156
R P PP + G A GP PV + P P + AA + P+ I
Sbjct: 199 RQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPK-I 257
Query: 157 ESP-ATASSAGCGSGP--RVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVA-M 212
ESP +++SS GS P +P R L G S+P H SQG +V +
Sbjct: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPH----HSQGFSVDNI 313
Query: 213 EAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRR 272
RGSP LL A+ + +A L L +Y
Sbjct: 314 MTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGS 373
Query: 273 QRGGGRGGGGRGGREAAATVHGNAAASSSAAA 304
GGG G G GG A T H N A S AA
Sbjct: 374 SGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAA 405
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 50.1 bits (118), Expect = 3e-06
Identities = 52/171 (30%), Positives = 63/171 (36%), Gaps = 33/171 (19%)
Query: 53 HATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPW 112
H+ HP S P +PPT+P PP A L+ G P P PP
Sbjct: 309 HSNQHPQS--------PAVPPTYPSGPPPAASALSTTPGN---------NGVPAPAAPP- 350
Query: 113 EVRGGARGPCSAPVGSRASSGPGLPSAAAARPARK-TLTCQPRSIESPATASSAGCGSGP 171
A GP ++P S S P + A A PA T QPR P+ S G G G
Sbjct: 351 ----SALGPKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPR---PPSVQPSGGGGGGS 403
Query: 172 RVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGG 222
G G SS + G +G TS S A + A S GG
Sbjct: 404 G-------GGGSSSSSNSSAGGGAGKQNGATSYSSVVADSPAEVALSSSGG 447
Score = 36.6 bits (83), Expect = 0.031
Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 16/180 (8%)
Query: 18 GSERRHSTRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPT--- 74
GS+ HS + ++ P P LS TP P + PP + P P
Sbjct: 304 GSKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASPAPSH 363
Query: 75 FPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGP 134
GT P A +A + G Q RP ++P GG+ G GS +SS
Sbjct: 364 NSGTPAPYAQAVAPPAPSGPS----TTQPRPPSVQPSGGGGGGSGGG-----GSSSSSN- 413
Query: 135 GLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSR 194
S+A ++ S+ + + A A SG + LGP P +P S+
Sbjct: 414 ---SSAGGGAGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSK 470
>gi|21361699 sphingosine kinase 2 [Homo sapiens]
Length = 654
Score = 49.3 bits (116), Expect = 5e-06
Identities = 52/187 (27%), Positives = 68/187 (36%), Gaps = 30/187 (16%)
Query: 14 GDVRGSERRHSTRTRKTHVPA-----NPAPFHT-PRKRHPLSHTPHATAHPPSSPPPLHI 67
G V G H+ R R +++PA +P P H+ PR + L+ TP PP + PLH
Sbjct: 361 GTVLGLATLHTYRGRLSYLPATVEPASPTPAHSLPRAKSELTLTPDPA--PPMAHSPLHR 418
Query: 68 T------PVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGP 121
+ P+ P P L + +G G + G A PL P
Sbjct: 419 SVSDLPLPLPQPALASPGSPEPLPILSLNGGGPELAGDWGGAGDAPLSPD---------- 468
Query: 122 CSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGP 181
SS PG P AA P + P S P A G+ P LL P
Sbjct: 469 ------PLLSSPPGSPKAALHSPVSEGAPVIPPSSGLPLPTPDARVGASTCGPPDHLLPP 522
Query: 182 GGRPSSP 188
G P P
Sbjct: 523 LGTPLPP 529
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 48.1 bits (113), Expect = 1e-05
Identities = 73/254 (28%), Positives = 99/254 (38%), Gaps = 41/254 (16%)
Query: 100 RAQARPRPLRPPWEVRGGARGPC--SAPVGSRAS-SGPGLPSAAAA----------RPAR 146
R +A RP R VRGG G C S GS A+ SG G+P + + + R
Sbjct: 49 RGRAERRPARGK-HVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLR 107
Query: 147 KTLTCQPRSIESPATASSAGCGSGP--RVPQV--RLLGPGGRPSSPARDGSRRKAGHGCT 202
++T P+ ASSA G P RVP G R S DG R ++G GC
Sbjct: 108 ISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCA 167
Query: 203 SQSQGDAVAMEAEARGSPGGRVL--MQELTLLP-VEASLILSVVAAVLQLHSY------R 253
++G +++ G P V+ + L P V S LS + + S R
Sbjct: 168 GAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSPGPPLQRSSSLNETLRGR 227
Query: 254 RPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAA-SSSAAARG--AAAA 310
RP G P G RG GR+ +A +A+A + AAR A
Sbjct: 228 RPPGPAP-----------AAAGATRGTAAPPGRDPSAWFLDSASACPTPLAARSWHPFVA 276
Query: 311 TTIDGGGKEDAAGA 324
+ G GK GA
Sbjct: 277 NKLCGRGKGAGGGA 290
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 47.0 bits (110), Expect = 2e-05
Identities = 60/219 (27%), Positives = 80/219 (36%), Gaps = 43/219 (19%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHPPSSPP-----PLH---------------ITPVLP 72
PA P+P P PL+H PH HPP PP P H I +L
Sbjct: 54 PAPPSPPAAPCLP-PLAHHPHLPPHPPPPPPQHLAAPAHQPQPAAQLHRTTNFFIDNILR 112
Query: 73 PTF--PGTQPPRALRLAE-------GSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCS 123
P F QPP L +A G G +++ G+ A R P+ P GA
Sbjct: 113 PDFGCKKEQPPPQLLVAAAARGGAGGGGRVERDRGQTAAGRD-PVHPLGTRAPGAASLLC 171
Query: 124 APVGSRASSGP--GLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGP 181
AP A+ GP G AAA A K + + A ++A + + G
Sbjct: 172 AP---DANCGPPDGSQPAAAGAGASKAGNPAAAAAAAAAAVAAAAAAAAAKPSDTGGGGS 228
Query: 182 GGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSP 220
GG SP G++ HG A+ + A G P
Sbjct: 229 GGGAGSPGAQGTKYPE-HG------NPAILLMGSANGGP 260
Score = 33.5 bits (75), Expect = 0.26
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 273 QRGGGRGGGGRGGREAAATVHGNAAASSSAAARGAAAATTIDGGGKEDAAGAG 325
Q G + G AAA AAA++ AAA AAAA D GG GAG
Sbjct: 184 QPAAAGAGASKAGNPAAAAA---AAAAAVAAAAAAAAAKPSDTGGGGSGGGAG 233
>gi|157671953 solute carrier family 4, anion exchanger, member 3
isoform 2 [Homo sapiens]
Length = 1259
Score = 47.0 bits (110), Expect = 2e-05
Identities = 69/288 (23%), Positives = 94/288 (32%), Gaps = 64/288 (22%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHPPSSP-PPLHITPVLPPTFP--------------- 76
P P+ ++ R HT H T HP S+ PP H LPPT
Sbjct: 59 PEKPSRSYSERDFEFHRHTSHHTHHPLSARLPPPHKLRRLPPTSARHTRRKRKKEKTSAP 118
Query: 77 ---GTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSG 133
GT P + A E ++EE ++ P+ PP G +GS
Sbjct: 119 PSEGTPPIQEEGGAGVDEEEEEEEEEEGESEAEPVEPP---PSGTPQKAKFSIGSDEDDS 175
Query: 134 PGLPSAAAA-------------RPARKTLTCQ---------PRSIESPATASSAGCGSGP 171
PGLP AA P + C ++ SP P
Sbjct: 176 PGLPGRAAVTKPLPSVGPHTDKSPQHSSRPCSELRDGDGTTDLALSSPRLLCCLPSSPSP 235
Query: 172 RVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTL 231
R RL G RP SP+ R+ A G+PGG Q++
Sbjct: 236 RARASRLAGEKSRPWSPSASYDLRER-------------LCPGSALGNPGGP--EQQVPT 280
Query: 232 LPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRG 279
EA ++ S ++ H D P RR H + + GGRG
Sbjct: 281 DEAEAQMLGSADLDDMKSHRLE----DNPGVRR-HLVKKPSRTQGGRG 323
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 46.6 bits (109), Expect = 3e-05
Identities = 69/251 (27%), Positives = 85/251 (33%), Gaps = 65/251 (25%)
Query: 55 TAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEV 114
T P PPP P P PG PP A R G G G G V
Sbjct: 2 TILPKKKPPPPDADPANEPPPPGPMPP-APRRGGGVGVGGGGTG---------------V 45
Query: 115 RGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVP 174
GG R S VG+R + P P + L P ++ A A G +GPR P
Sbjct: 46 GGGDRDRDSGVVGARPRASP---------PPQGPLPGPPGALHRWALAVPPGAVAGPR-P 95
Query: 175 QVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPV 234
Q P G P P G G GDA+ A G+ G
Sbjct: 96 QQASPPPCGGPGGP---------GGG-----PGDALGAAAAGVGAAG------------- 128
Query: 235 EASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHG 294
+++ V AV G P GH + RR+ G G GGG RE +
Sbjct: 129 ---VVVGVGGAV-------GVGGCCSGP--GHSKRRRQAPGVGAVGGGSPEREEVGAGYN 176
Query: 295 NAAASSSAAAR 305
+ +AAAR
Sbjct: 177 SEDEYEAAAAR 187
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 46.6 bits (109), Expect = 3e-05
Identities = 69/251 (27%), Positives = 85/251 (33%), Gaps = 65/251 (25%)
Query: 55 TAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEV 114
T P PPP P P PG PP A R G G G G V
Sbjct: 2 TILPKKKPPPPDADPANEPPPPGPMPP-APRRGGGVGVGGGGTG---------------V 45
Query: 115 RGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVP 174
GG R S VG+R + P P + L P ++ A A G +GPR P
Sbjct: 46 GGGDRDRDSGVVGARPRASP---------PPQGPLPGPPGALHRWALAVPPGAVAGPR-P 95
Query: 175 QVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPV 234
Q P G P P G G GDA+ A G+ G
Sbjct: 96 QQASPPPCGGPGGP---------GGG-----PGDALGAAAAGVGAAG------------- 128
Query: 235 EASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHG 294
+++ V AV G P GH + RR+ G G GGG RE +
Sbjct: 129 ---VVVGVGGAV-------GVGGCCSGP--GHSKRRRQAPGVGAVGGGSPEREEVGAGYN 176
Query: 295 NAAASSSAAAR 305
+ +AAAR
Sbjct: 177 SEDEYEAAAAR 187
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 46.6 bits (109), Expect = 3e-05
Identities = 69/251 (27%), Positives = 85/251 (33%), Gaps = 65/251 (25%)
Query: 55 TAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEV 114
T P PPP P P PG PP A R G G G G V
Sbjct: 2 TILPKKKPPPPDADPANEPPPPGPMPP-APRRGGGVGVGGGGTG---------------V 45
Query: 115 RGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVP 174
GG R S VG+R + P P + L P ++ A A G +GPR P
Sbjct: 46 GGGDRDRDSGVVGARPRASP---------PPQGPLPGPPGALHRWALAVPPGAVAGPR-P 95
Query: 175 QVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPV 234
Q P G P P G G GDA+ A G+ G
Sbjct: 96 QQASPPPCGGPGGP---------GGG-----PGDALGAAAAGVGAAG------------- 128
Query: 235 EASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHG 294
+++ V AV G P GH + RR+ G G GGG RE +
Sbjct: 129 ---VVVGVGGAV-------GVGGCCSGP--GHSKRRRQAPGVGAVGGGSPEREEVGAGYN 176
Query: 295 NAAASSSAAAR 305
+ +AAAR
Sbjct: 177 SEDEYEAAAAR 187
>gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 46.2 bits (108), Expect = 4e-05
Identities = 63/212 (29%), Positives = 77/212 (36%), Gaps = 40/212 (18%)
Query: 4 APKSLNKDEAGDVRGSERRHSTRTR----KTHVPANPAPFHTPRKRHPLSHT-PHATAHP 58
AP S +DE G S R R H+P + T + P H P A P
Sbjct: 7 APYSTAEDELGSRTDSSRALPAPLRLCPQDLHLPQDFPKALTTNHQAPGPHARPRQAARP 66
Query: 59 PSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA 118
P + P P L P T PR +L + E+ R AR PP +RGGA
Sbjct: 67 PQAFAPTAWAPALASPAPDTPRPRDAQL-------RPEKAGRDLARDVENPPP--LRGGA 117
Query: 119 RGPC----SAPVGSRASSG-----PGLPSAAAARPARKTLTCQPRSIESPAT-------- 161
R C A G+RA SG P P A A K QP S T
Sbjct: 118 RSRCGESRQAGGGARAGSGLPRRMPRPPIAFATLERAKERKRQPPSPPPKQTDKKLSFSY 177
Query: 162 -----ASSAGCGSG----PRVPQVRLLGPGGR 184
A +AG G G ++P+ R P GR
Sbjct: 178 DHGLCAPAAGGGQGGAHTRKLPRARASPPTGR 209
>gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 46.2 bits (108), Expect = 4e-05
Identities = 63/212 (29%), Positives = 77/212 (36%), Gaps = 40/212 (18%)
Query: 4 APKSLNKDEAGDVRGSERRHSTRTR----KTHVPANPAPFHTPRKRHPLSHT-PHATAHP 58
AP S +DE G S R R H+P + T + P H P A P
Sbjct: 7 APYSTAEDELGSRTDSSRALPAPLRLCPQDLHLPQDFPKALTTNHQAPGPHARPRQAARP 66
Query: 59 PSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA 118
P + P P L P T PR +L + E+ R AR PP +RGGA
Sbjct: 67 PQAFAPTAWAPALASPAPDTPRPRDAQL-------RPEKAGRDLARDVENPPP--LRGGA 117
Query: 119 RGPC----SAPVGSRASSG-----PGLPSAAAARPARKTLTCQPRSIESPAT-------- 161
R C A G+RA SG P P A A K QP S T
Sbjct: 118 RSRCGESRQAGGGARAGSGLPRRMPRPPIAFATLERAKERKRQPPSPPPKQTDKKLSFSY 177
Query: 162 -----ASSAGCGSG----PRVPQVRLLGPGGR 184
A +AG G G ++P+ R P GR
Sbjct: 178 DHGLCAPAAGGGQGGAHTRKLPRARASPPTGR 209
>gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 46.2 bits (108), Expect = 4e-05
Identities = 63/212 (29%), Positives = 77/212 (36%), Gaps = 40/212 (18%)
Query: 4 APKSLNKDEAGDVRGSERRHSTRTR----KTHVPANPAPFHTPRKRHPLSHT-PHATAHP 58
AP S +DE G S R R H+P + T + P H P A P
Sbjct: 7 APYSTAEDELGSRTDSSRALPAPLRLCPQDLHLPQDFPKALTTNHQAPGPHARPRQAARP 66
Query: 59 PSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA 118
P + P P L P T PR +L + E+ R AR PP +RGGA
Sbjct: 67 PQAFAPTAWAPALASPAPDTPRPRDAQL-------RPEKAGRDLARDVENPPP--LRGGA 117
Query: 119 RGPC----SAPVGSRASSG-----PGLPSAAAARPARKTLTCQPRSIESPAT-------- 161
R C A G+RA SG P P A A K QP S T
Sbjct: 118 RSRCGESRQAGGGARAGSGLPRRMPRPPIAFATLERAKERKRQPPSPPPKQTDKKLSFSY 177
Query: 162 -----ASSAGCGSG----PRVPQVRLLGPGGR 184
A +AG G G ++P+ R P GR
Sbjct: 178 DHGLCAPAAGGGQGGAHTRKLPRARASPPTGR 209
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 46.2 bits (108), Expect = 4e-05
Identities = 57/245 (23%), Positives = 74/245 (30%), Gaps = 14/245 (5%)
Query: 30 THVPANPAPFHTPRKRHPLSHTPHATAHPP-SSPPPLHITPVLPPTFPGTQPPR-ALRLA 87
TH P P+P P +P PP +P P + P P T P+ A L+
Sbjct: 853 THSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALS 912
Query: 88 EGSGEGKQEEGRRA----QARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAAR 143
S K+ A A P P P P P P P+A
Sbjct: 913 MTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPS 972
Query: 144 PARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTS 203
P T P+ +P A+ GP P P G P+ PA K T
Sbjct: 973 PKGGPATPSPKGAPTPPAATPPSPKGGPATP-----SPKGAPTPPAVTPPSPKGSPAATP 1027
Query: 204 QSQGDA---VAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTP 260
+G + A +GSP L + P A L P TP
Sbjct: 1028 FPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATP 1087
Query: 261 DPRRG 265
+G
Sbjct: 1088 PSPKG 1092
Score = 40.4 bits (93), Expect = 0.002
Identities = 40/161 (24%), Positives = 60/161 (37%), Gaps = 19/161 (11%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGE 92
P P P P +P T P++ P P P + G PP A +G
Sbjct: 1324 PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPA 1383
Query: 93 GKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLT-- 150
+R A P P +G P P+ + + + AA P++ LT
Sbjct: 1384 MTPPSPKRGPAIPSP-------KGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPP 1436
Query: 151 -CQPRSI-ESPATASSAGCGSGPRVPQVRLLGPGGRPSSPA 189
P S+ ++PAT++ G GP P + G P+ PA
Sbjct: 1437 AVTPVSLKKAPATSAPKG---GPATPSSK-----GDPTLPA 1469
Score = 39.7 bits (91), Expect = 0.004
Identities = 44/171 (25%), Positives = 57/171 (33%), Gaps = 19/171 (11%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGE 92
P PA K P + P PP++ PP + P G P + G
Sbjct: 1241 PTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG 1300
Query: 93 GKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRAS--SGPGLPSAAAARPARKTLT 150
+ A P P + G P AP + S G P+ A P+ K
Sbjct: 1301 PATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGP 1360
Query: 151 CQPRSIESP----ATASSAGCGS--------GPRVPQVRLLGPGGRPSSPA 189
P S E P AT S G + GP +P P G P+SPA
Sbjct: 1361 TTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIP-----SPKGDPTSPA 1406
Score = 38.1 bits (87), Expect = 0.011
Identities = 40/169 (23%), Positives = 52/169 (30%), Gaps = 9/169 (5%)
Query: 33 PANPAPFHTPRKRHPLSHTPH---ATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEG 89
PA P+P P +P AT P +P P +TP P P P
Sbjct: 977 PATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPP 1036
Query: 90 SGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTL 149
+ +G A A P P P P P P P+A P
Sbjct: 1037 AATPPSPKGSPA-ATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPA 1095
Query: 150 TCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAG 198
T P+ P A+ G P + G P++PA K G
Sbjct: 1096 TPSPKGAPMPPAATPPSPKGGLATPPHK-----GAPTTPAATPPSPKGG 1139
Score = 38.1 bits (87), Expect = 0.011
Identities = 44/175 (25%), Positives = 60/175 (34%), Gaps = 28/175 (16%)
Query: 54 ATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWE 113
AT+ P +P P TP P PGT PP+ A P P
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTPPPKG-------------------APTPPAVTPPS 1342
Query: 114 VRGGARGPCSAPVGSRASSGPGL---PSAAAARPARK--TLTCQPRSIESPATASSAGCG 168
+G P + P + P P+ AA P+ K P PA S G
Sbjct: 1343 PKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKG-- 1400
Query: 169 SGPRVPQVRLLGPGGRPSSP-ARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGG 222
P P V L P P++P R+G+ + T + +A A +P G
Sbjct: 1401 -DPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKG 1454
Score = 37.7 bits (86), Expect = 0.014
Identities = 38/167 (22%), Positives = 52/167 (31%), Gaps = 14/167 (8%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGE 92
P PA K P + +P PP++ PP P+ G P A+ G
Sbjct: 963 PTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGS 1022
Query: 93 GKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSG-PGLPSAAAARPARKTLTC 151
+ + P PP P +P + G P P+A P T
Sbjct: 1023 PAATPFPKGASTPPAATPP--------SPKGSPAATPLPKGAPTTPAATLPSPKGGPATP 1074
Query: 152 QPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAG 198
+ +P A+ GP P P G P PA K G
Sbjct: 1075 SLKGAPTPPAATPPSPKGGPATP-----SPKGAPMPPAATPPSPKGG 1116
Score = 37.0 bits (84), Expect = 0.024
Identities = 46/173 (26%), Positives = 57/173 (32%), Gaps = 30/173 (17%)
Query: 41 TPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEG-- 98
TP P AT P +P TP P P T PP+ + + G
Sbjct: 1220 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLA 1279
Query: 99 ---RRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGP-GLPSAAAARPARKTLTCQPR 154
+ P + PP +P G A+S P G P+ AA P P
Sbjct: 1280 TPPHKGAPNPAVVTPP------------SPKGGPATSPPKGAPTPPAATP--------PS 1319
Query: 155 SIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAGHGCTSQSQG 207
SP T G P P V P G P+ PA S K G S +G
Sbjct: 1320 PKGSPGTPPPKG---APTPPAVTPPSPKGTPTLPATTPS-SKGGPTTPSSKEG 1368
Score = 36.2 bits (82), Expect = 0.041
Identities = 37/169 (21%), Positives = 57/169 (33%), Gaps = 18/169 (10%)
Query: 44 KRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEG----- 98
K+ P TP PSS V P T+ G P+ L + +E
Sbjct: 1559 KKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPA 1618
Query: 99 ------RRAQARPRPLRPPWE---VRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTL 149
+ A P P P + ++P G +P A+ PA+K
Sbjct: 1619 VTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGP 1678
Query: 150 TCQPRSIESPATAS----SAGCGSGPRVPQVRLLGPGGRPSSPARDGSR 194
T + +PA S +A GP+ + P P A++GS+
Sbjct: 1679 TALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSK 1727
Score = 33.9 bits (76), Expect = 0.20
Identities = 48/227 (21%), Positives = 73/227 (32%), Gaps = 32/227 (14%)
Query: 24 STRTRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSS--PPPLHITPVLPPTFPGTQPP 81
+T + PA PAP P + +P PSS P +L P T P
Sbjct: 1485 ATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAP 1544
Query: 82 RALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGL-PSAA 140
+ + ++ A P P P + P ASS P + PS
Sbjct: 1545 KEALIPPAM---TVPSPKKTPAIPTPKEAP-----------ATPSSKEASSPPAVTPSTY 1590
Query: 141 AARPARKTL-------TCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGS 193
P+ K L + P+ +P + GP P P G P+SP S
Sbjct: 1591 KGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATP-----APKGTPTSPPVTPS 1645
Query: 194 RRK---AGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEAS 237
K + G V ++ + G ++E+ + P S
Sbjct: 1646 SLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPES 1692
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 45.8 bits (107), Expect = 5e-05
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 100 RAQARPRPLRPPWEVRGGARGPC--SAPVGSRAS-SGPGLPSAAAA----------RPAR 146
R +A RP R VRGG G C S GS A+ SG G+P + + + R
Sbjct: 49 RGRAERRPARGK-HVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLR 107
Query: 147 KTLTCQPRSIESPATASSAGCGSGP--RVPQV--RLLGPGGRPSSPARDGSRRKAGHGCT 202
++T P+ ASSA G P RVP G R S DG R ++G GC
Sbjct: 108 ISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCA 167
Query: 203 SQSQGDAVAMEAEARGSPGGRVL 225
++G +++ G P V+
Sbjct: 168 GAARGPDASLDTRREGWPRAAVV 190
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 45.8 bits (107), Expect = 5e-05
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 100 RAQARPRPLRPPWEVRGGARGPC--SAPVGSRAS-SGPGLPSAAAA----------RPAR 146
R +A RP R VRGG G C S GS A+ SG G+P + + + R
Sbjct: 49 RGRAERRPARGK-HVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLR 107
Query: 147 KTLTCQPRSIESPATASSAGCGSGP--RVPQV--RLLGPGGRPSSPARDGSRRKAGHGCT 202
++T P+ ASSA G P RVP G R S DG R ++G GC
Sbjct: 108 ISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCA 167
Query: 203 SQSQGDAVAMEAEARGSPGGRVL 225
++G +++ G P V+
Sbjct: 168 GAARGPDASLDTRREGWPRAAVV 190
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 45.8 bits (107), Expect = 5e-05
Identities = 53/192 (27%), Positives = 66/192 (34%), Gaps = 16/192 (8%)
Query: 20 ERRHSTRTRKTHVPANPAP----FHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTF 75
E+ HS + PA AP F P P+ P P PPP + PP
Sbjct: 395 EQIHSAPGPRRPAPALLAPPTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPPPTLQPPAL 454
Query: 76 PGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPG 135
T P A L G G + A P PP A P AP + A P
Sbjct: 455 QPTPLPVAPPLTPGLGHKESALAPTA----APALPPALAADQAPAPSPAPAPTVAEPSPP 510
Query: 136 LPSAAAARPARKTLTCQPRSIESP--ATASSAGCGSGPR------VPQVRLLGPGGRPSS 187
+ + A A KT T + + + AT G GPR VP G GG +S
Sbjct: 511 VSAPAPAAAPIKTRTRRNKGSRAARGATRKDGLHGDGPRERATATVPDSSGGGGGGSGAS 570
Query: 188 PARDGSRRKAGH 199
+ R A H
Sbjct: 571 QTGAANTRAARH 582
Score = 32.7 bits (73), Expect = 0.45
Identities = 54/229 (23%), Positives = 73/229 (31%), Gaps = 49/229 (21%)
Query: 36 PAPFHTPRKRHPLSHTPHATAHPPS------SPPPLHIT-----PVLPPTFPGT----QP 80
PA PR R L + PPS PPP ++ P P FP +P
Sbjct: 114 PAGTPVPRIRRLLEASHRGQGDPPSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPLETWKP 173
Query: 81 PRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAA 140
P L E + + R A P PP E + G R +R + P
Sbjct: 174 PPPL-----PSERQPADRRITPALATPASPPTESQAGPRNQGQTAGRARGGAPPHAGEGE 228
Query: 141 AARPARK----TLTCQ-----------PRSIESPATASSAGCGSG-------PRVPQVRL 178
A+PA +L C+ P + S A +S G G G + +
Sbjct: 229 MAQPADSESGLSLLCKITFKSRPSLAPPAASSSLAAKASLGGGGGGGLFAASGAISYAEV 288
Query: 179 LGPGGRPSSPA-------RDGSRRKAGHGCTSQSQGDAVAMEAEARGSP 220
L G P A R + G G G A ++AR P
Sbjct: 289 LKQGPLPPGAARPLGEVSRGAQEAEGGDGDGEGCSGPPSAPASQARALP 337
>gi|33598929 scavenger receptor class F, member 1 isoform 1
precursor [Homo sapiens]
Length = 830
Score = 45.4 bits (106), Expect = 7e-05
Identities = 54/197 (27%), Positives = 75/197 (38%), Gaps = 27/197 (13%)
Query: 2 LRAPKSLNKDEAGDVRGSERRHSTRTRKTHVP------ANPAPFHTPRKRHPLS------ 49
LR PK L++ G E ST + P A+P T +R PL
Sbjct: 613 LRKPKRLSRGAQSGPEGREAEESTGPEEAEAPESFPAAASPGDSATGHRRPPLGGRTVAE 672
Query: 50 HTPHATAHPPSSPPPLHITPVLPPTFPGTQPP-RALRLAEGSGEGKQEEGRRAQARPRPL 108
H S P+ +L G++ P R++ GS + Q E + +A P+P
Sbjct: 673 HVEAIEGSVQESSGPVTTIYMLAGKPRGSEGPVRSVFRHFGSFQKGQAEAKVKRAIPKPP 732
Query: 109 RPPWEVRGGARGPCSAPVGSRASSGP--GLPSAA---AARPARKTL-----TCQPRSIES 158
R + G+ G S VG +S P GLP A A RP T R +
Sbjct: 733 RQALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTESSRRAQE 792
Query: 159 PATASSAGCGSGPRVPQ 175
P +GCGS + PQ
Sbjct: 793 PV----SGCGSPEQDPQ 805
>gi|145309306 scavenger receptor class F, member 1 isoform 5
precursor [Homo sapiens]
Length = 744
Score = 45.4 bits (106), Expect = 7e-05
Identities = 54/197 (27%), Positives = 75/197 (38%), Gaps = 27/197 (13%)
Query: 2 LRAPKSLNKDEAGDVRGSERRHSTRTRKTHVP------ANPAPFHTPRKRHPLS------ 49
LR PK L++ G E ST + P A+P T +R PL
Sbjct: 527 LRKPKRLSRGAQSGPEGREAEESTGPEEAEAPESFPAAASPGDSATGHRRPPLGGRTVAE 586
Query: 50 HTPHATAHPPSSPPPLHITPVLPPTFPGTQPP-RALRLAEGSGEGKQEEGRRAQARPRPL 108
H S P+ +L G++ P R++ GS + Q E + +A P+P
Sbjct: 587 HVEAIEGSVQESSGPVTTIYMLAGKPRGSEGPVRSVFRHFGSFQKGQAEAKVKRAIPKPP 646
Query: 109 RPPWEVRGGARGPCSAPVGSRASSGP--GLPSAA---AARPARKTL-----TCQPRSIES 158
R + G+ G S VG +S P GLP A A RP T R +
Sbjct: 647 RQALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTESSRRAQE 706
Query: 159 PATASSAGCGSGPRVPQ 175
P +GCGS + PQ
Sbjct: 707 PV----SGCGSPEQDPQ 719
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 45.1 bits (105), Expect = 9e-05
Identities = 44/152 (28%), Positives = 56/152 (36%), Gaps = 11/152 (7%)
Query: 76 PGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPG 135
PG P+ A G+ GK + G + P L +RGGA P P G + ++GP
Sbjct: 656 PGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPP--GPEGGKGAAGPP 713
Query: 136 LPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQV----RLLGPGGRPSSPARD 191
P AA P + + + + SP G GP V GP G P
Sbjct: 714 GPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPA 773
Query: 192 GSRRKAGHGCTSQSQGDAVAMEAEARGSPGGR 223
G G G G A RGSPG R
Sbjct: 774 GQPGDKGEGGAPGLPG-----IAGPRGSPGER 800
Score = 44.3 bits (103), Expect = 1e-04
Identities = 34/115 (29%), Positives = 40/115 (34%), Gaps = 11/115 (9%)
Query: 117 GARGPCS--------APVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCG 168
G RGP P G R + GP P AA P R + P P + G
Sbjct: 489 GFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSD 548
Query: 169 SGPRVPQVRLLGPGGRPSSPARDGSRRKAG-HGCTSQSQGDAVAMEAEARGSPGG 222
P P + G GRP P G R + G G D + RG PGG
Sbjct: 549 GKPGPPGSQ--GESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGG 601
Score = 38.5 bits (88), Expect = 0.008
Identities = 76/320 (23%), Positives = 94/320 (29%), Gaps = 70/320 (21%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGE 92
P P P T HP S PP P P PP PG P +G
Sbjct: 179 PGPPGPPGT--SGHPGSPGSPGYQGPPGEPG--QAGPSGPPGPPGAIGPSGPAGKDGESG 234
Query: 93 GKQEEGRRAQARPRPLRPP--------------WEVRGGARGPCSAP------------- 125
G R P ++ P ++ R G +G AP
Sbjct: 235 RPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENG 294
Query: 126 ----VGSRASSG----PGLPSAAAAR--PARKTLTCQPRSIESPATASSAGCGSGPRVPQ 175
+G R + G PGLP AA AR + QP P TA G
Sbjct: 295 APGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGE-- 352
Query: 176 VRLLGPGGRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVE 235
+GP G P S G R + G + +QG GSPGG+ M
Sbjct: 353 ---VGPAGSPGSNGAPGQRGEPGPQGHAGAQGP--PGPPGINGSPGGKGEM--------- 398
Query: 236 ASLILSVVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGN 295
+ ++ PAG P G RGG G G+ A G
Sbjct: 399 GPAGIPGAPGLMGARGPPGPAGANGAP-------------GLRGGAGEPGKNGAKGEPGP 445
Query: 296 AAASSSAAARGAAAATTIDG 315
A G A DG
Sbjct: 446 RGERGEAGIPGVPGAKGEDG 465
Score = 31.6 bits (70), Expect = 1.0
Identities = 66/264 (25%), Positives = 83/264 (31%), Gaps = 29/264 (10%)
Query: 73 PTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASS 132
P PG PR GS + E G A P P G +G AP G +
Sbjct: 785 PGLPGIAGPR------GSPGERGETGPPGPAG-FPGAPGQNGEPGGKGERGAP-GEKGEG 836
Query: 133 GP----GLP--SAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVR-LLGPGGRP 185
GP G P S A P + + + S P A G P P GP G
Sbjct: 837 GPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPS 896
Query: 186 SSPARDGSRRKAGH----GCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILS 241
SP +DG AG+ G S A + +GSPG + P A L
Sbjct: 897 GSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQG--------PPGAPGPLG 948
Query: 242 VVAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSS 301
+A + P G P PR + G G G G G + +
Sbjct: 949 -IAGITGARGLAGPPG-MPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGT 1006
Query: 302 AAARGAAAATTIDGGGKEDAAGAG 325
A G DG D + G
Sbjct: 1007 AGEPGRDGNPGSDGLPGRDGSPGG 1030
Score = 31.6 bits (70), Expect = 1.0
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 21/91 (23%)
Query: 59 PSSPPPL-----HITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWE 113
PS PP H P+ PP G + R R +EGS G Q P P PP
Sbjct: 1144 PSGPPGKDGTSGHPGPIGPP---GPRGNRGERGSEGS------PGHPGQ--PGPPGPP-- 1190
Query: 114 VRGGARGPCSAPVGSRASSGPGLPSAAAARP 144
GA GPC VG+ A +G G A P
Sbjct: 1191 ---GAPGPCCGGVGAAAIAGIGGEKAGGFAP 1218
Score = 31.2 bits (69), Expect = 1.3
Identities = 40/133 (30%), Positives = 46/133 (34%), Gaps = 11/133 (8%)
Query: 96 EEGRRAQARPRPLRPPWEVRG--GARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQP 153
E GR P R V G G +G AP + GPG P P K P
Sbjct: 559 ESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQG--PPGKNGETGP 616
Query: 154 RSIESPATASSAGCGSGPRVPQ--VRLLGPGGRP---SSPARDGSRRKAGHGCTSQSQGD 208
+ P +GP PQ L G GG P P G + AG +GD
Sbjct: 617 QGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGD 676
Query: 209 AVAMEAEARGSPG 221
A A RG PG
Sbjct: 677 AGA--PGERGPPG 687
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 45.1 bits (105), Expect = 9e-05
Identities = 80/320 (25%), Positives = 110/320 (34%), Gaps = 39/320 (12%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVL------PPTFPGT---QPPRA 83
P +P+ P+ PL+ P A PP PP TP L P +FPG P +
Sbjct: 490 PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 549
Query: 84 LRLAEGSGEGKQEEGRRA----QARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSA 139
L ++ + Q A Q P P P ++ R P P + SGP L A
Sbjct: 550 LPMSPLATPPPQAPPVLAAPLLQVPPSPPASP-TLQAPRRPPTPGP--DTSVSGPRLTLA 606
Query: 140 AAARPARKTLTCQPRSIESPATAS-SAGCGSGPRVPQVRLLGP-GGRPSSPARDGSRRKA 197
A P ++ P A S+ S P + GP GG +SP D
Sbjct: 607 LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAAC 666
Query: 198 GHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAG 257
S+ +A RG+PG + T P A + ++ + P
Sbjct: 667 HPAAWSRGPAPPLAF----RGAPGAPLPWPPAT-GPGSADGLCTIYETEGPESATPAPGA 721
Query: 258 DTPDPRRGHHRHRRRQRGGGRGGGGR------------GGREAAATVHGNAAASSSAAAR 305
P P G + G G G R G +A+ H + AAA
Sbjct: 722 LDPGPSPG-TSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAE 780
Query: 306 GAAAATTIDGGGKEDAAGAG 325
GAA + GGG A G G
Sbjct: 781 GAAGGS---GGGPGGAEGGG 797
Score = 44.7 bits (104), Expect = 1e-04
Identities = 75/312 (24%), Positives = 109/312 (34%), Gaps = 49/312 (15%)
Query: 32 VPANPAPFHTPRKRHPLSHTPHAT-AHPPSSPPPLHITPVL--PPTFPGTQPPRALRLAE 88
+P+ PA F P + P + A PP PP+ P+L PP+ P + +A R
Sbjct: 531 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 590
Query: 89 GSGEGKQEEGRRAQARPRPLRPPWEVRGGAR---GPCSAPVGSRASS----------GPG 135
G G R P PP R + GP A S A+S GP
Sbjct: 591 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE 650
Query: 136 LPSAAAARPARKTLTCQPRS-IESPATASSAGCGSGPRVPQVRLLGPG------------ 182
+AA+ P + C P + PA + G +P GPG
Sbjct: 651 GGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETE 710
Query: 183 GRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSV 242
G S+ G+ TS + A A + SP + + EL L ++AS++ +
Sbjct: 711 GPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPK-QARLGELPLGALQASVVQHL 769
Query: 243 VAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSA 302
++ L L + AG G GGG G T AA S +
Sbjct: 770 LSRTLLLAAAEGAAG-------------------GSGGGPGGAEGGGVTGGARAALSDAE 810
Query: 303 AARGAAAATTID 314
R A + +D
Sbjct: 811 LGRWAELLSPLD 822
Score = 35.0 bits (79), Expect = 0.091
Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 8/119 (6%)
Query: 47 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 106
PLS P AT PP +PP L + P+ P P PP + LA S + P
Sbjct: 385 PLS--PLATP-PPQAPPALALPPLQAPPSPPASPPLS-PLATPSPQAPNALAVHLLQAPF 440
Query: 107 PLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSA 165
P V+ P S PV A+ P + AA P L P SP + SA
Sbjct: 441 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP----LQVPPSPPASPPMSPSA 495
Score = 34.3 bits (77), Expect = 0.16
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 42/213 (19%)
Query: 33 PANP--APFHTPRKRHP-------LSHTPHATAHPP----SSPPPLHITPVLPPTFPGTQ 79
PA+P +P TP + P L P A PP ++PPP P+ P +
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 514
Query: 80 PPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA--RGPCSAPVGSRASSGPGLP 137
PP A + QA P PP G A S P+ A+ P P
Sbjct: 515 PPPQAPPALATPP--------LQALP---SPPASFPGQAPFSPSASLPMSPLATPPPQAP 563
Query: 138 SAAAA--------RPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPA 189
AA PA TL PR +P +S SGPR+ GP P P+
Sbjct: 564 PVLAAPLLQVPPSPPASPTLQA-PRRPPTPGPDTSV---SGPRLTLALAPGP---PPPPS 616
Query: 190 RDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGG 222
R S +G S A + E RG G
Sbjct: 617 RSPSSTLSGPDLAGHS-SSATSTPEELRGYDSG 648
Score = 33.9 bits (76), Expect = 0.20
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 4 APKSLNKDEAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSH-TPHATAHPPSSP 62
+P + + AG G +R ++R+ + ++ P +P + P + TP A AHP S P
Sbjct: 221 SPAARRRPSAG---GGLQRPASRS----LSSSATPLSSPARSGPSARGTPRAPAHP-SQP 272
Query: 63 PPLHITPVLPP--TFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARG 120
P + + PP T P AL S Q++ P P A
Sbjct: 273 KPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLP-------ATP 325
Query: 121 PCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATAS 163
S+ A+ P P + +A P+ +TL P + S AT S
Sbjct: 326 HSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTS 368
Score = 28.5 bits (62), Expect = 8.5
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHP-PSSPPPLHITPVLPPTFPGTQPPRAL--RLAEG 89
P PA H+ L+ TP A P PS+PP L P PP P +Q +L +
Sbjct: 319 PTLPATPHSSSLTCQLA-TPLPLAPPSPSAPPSLQTLP-SPPATPPSQATTSLGSPTLQA 376
Query: 90 SGEGKQEEGRRAQARPRPLRPPW----EVRGGARGPCSAPVGSRASSGPGLPSAAA 141
+ A P P PP ++ P S P+ A+ P P+A A
Sbjct: 377 THSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA 432
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 45.1 bits (105), Expect = 9e-05
Identities = 80/320 (25%), Positives = 110/320 (34%), Gaps = 39/320 (12%)
Query: 33 PANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVL------PPTFPGT---QPPRA 83
P +P+ P+ PL+ P A PP PP TP L P +FPG P +
Sbjct: 451 PMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 510
Query: 84 LRLAEGSGEGKQEEGRRA----QARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSA 139
L ++ + Q A Q P P P ++ R P P + SGP L A
Sbjct: 511 LPMSPLATPPPQAPPVLAAPLLQVPPSPPASP-TLQAPRRPPTPGP--DTSVSGPRLTLA 567
Query: 140 AAARPARKTLTCQPRSIESPATAS-SAGCGSGPRVPQVRLLGP-GGRPSSPARDGSRRKA 197
A P ++ P A S+ S P + GP GG +SP D
Sbjct: 568 LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAAC 627
Query: 198 GHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAG 257
S+ +A RG+PG + T P A + ++ + P
Sbjct: 628 HPAAWSRGPAPPLAF----RGAPGAPLPWPPAT-GPGSADGLCTIYETEGPESATPAPGA 682
Query: 258 DTPDPRRGHHRHRRRQRGGGRGGGGR------------GGREAAATVHGNAAASSSAAAR 305
P P G + G G G R G +A+ H + AAA
Sbjct: 683 LDPGPSPG-TSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAE 741
Query: 306 GAAAATTIDGGGKEDAAGAG 325
GAA + GGG A G G
Sbjct: 742 GAAGGS---GGGPGGAEGGG 758
Score = 44.7 bits (104), Expect = 1e-04
Identities = 75/312 (24%), Positives = 109/312 (34%), Gaps = 49/312 (15%)
Query: 32 VPANPAPFHTPRKRHPLSHTPHAT-AHPPSSPPPLHITPVL--PPTFPGTQPPRALRLAE 88
+P+ PA F P + P + A PP PP+ P+L PP+ P + +A R
Sbjct: 492 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 551
Query: 89 GSGEGKQEEGRRAQARPRPLRPPWEVRGGAR---GPCSAPVGSRASS----------GPG 135
G G R P PP R + GP A S A+S GP
Sbjct: 552 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE 611
Query: 136 LPSAAAARPARKTLTCQPRS-IESPATASSAGCGSGPRVPQVRLLGPG------------ 182
+AA+ P + C P + PA + G +P GPG
Sbjct: 612 GGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETE 671
Query: 183 GRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSV 242
G S+ G+ TS + A A + SP + + EL L ++AS++ +
Sbjct: 672 GPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPK-QARLGELPLGALQASVVQHL 730
Query: 243 VAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSA 302
++ L L + AG G GGG G T AA S +
Sbjct: 731 LSRTLLLAAAEGAAG-------------------GSGGGPGGAEGGGVTGGARAALSDAE 771
Query: 303 AARGAAAATTID 314
R A + +D
Sbjct: 772 LGRWAELLSPLD 783
Score = 35.0 bits (79), Expect = 0.091
Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 8/119 (6%)
Query: 47 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 106
PLS P AT PP +PP L + P+ P P PP + LA S + P
Sbjct: 346 PLS--PLATP-PPQAPPALALPPLQAPPSPPASPPLS-PLATPSPQAPNALAVHLLQAPF 401
Query: 107 PLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSA 165
P V+ P S PV A+ P + AA P L P SP + SA
Sbjct: 402 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP----LQVPPSPPASPPMSPSA 456
Score = 34.3 bits (77), Expect = 0.16
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 42/213 (19%)
Query: 33 PANP--APFHTPRKRHP-------LSHTPHATAHPP----SSPPPLHITPVLPPTFPGTQ 79
PA+P +P TP + P L P A PP ++PPP P+ P +
Sbjct: 416 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 475
Query: 80 PPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGA--RGPCSAPVGSRASSGPGLP 137
PP A + QA P PP G A S P+ A+ P P
Sbjct: 476 PPPQAPPALATPP--------LQALP---SPPASFPGQAPFSPSASLPMSPLATPPPQAP 524
Query: 138 SAAAA--------RPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPA 189
AA PA TL PR +P +S SGPR+ GP P P+
Sbjct: 525 PVLAAPLLQVPPSPPASPTLQA-PRRPPTPGPDTSV---SGPRLTLALAPGP---PPPPS 577
Query: 190 RDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGG 222
R S +G S A + E RG G
Sbjct: 578 RSPSSTLSGPDLAGHS-SSATSTPEELRGYDSG 609
Score = 33.9 bits (76), Expect = 0.20
Identities = 46/191 (24%), Positives = 71/191 (37%), Gaps = 36/191 (18%)
Query: 4 APKSLNKDEAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSH-TPHATAHPPSSP 62
+P + + AG G +R ++R+ + ++ P +P + P + TP A AHP S P
Sbjct: 212 SPAARRRPSAG---GGLQRPASRS----LSSSATPLSSPARSGPSARGTPRAPAHP-SQP 263
Query: 63 PPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPC 122
P + + PP PPR K PL P P
Sbjct: 264 KPKGLQALRPPQ---VTPPR-----------KDAAPALGPLSSSPLATP--------SPS 301
Query: 123 SAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIES-----PATASSAGCGSGPRVPQVR 177
+ P S S LPS A P++ T + ++++ P+ S P+ P
Sbjct: 302 APPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPAL 361
Query: 178 LLGPGGRPSSP 188
L P P SP
Sbjct: 362 ALPPLQAPPSP 372
Score = 33.5 bits (75), Expect = 0.26
Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 20/144 (13%)
Query: 17 RGSERR--HSTRTRKTHVPANPAPFHTPRKRH------PLSHTPHATAHP-----PSSPP 63
RG+ R H ++ + + A P TP ++ PLS +P AT P PS+PP
Sbjct: 251 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPP 310
Query: 64 PLHITPVLPPTFPGTQPPRAL--RLAEGSGEGKQEEGRRAQARPRPLRPPW----EVRGG 117
L P PP P +Q +L + + A P P PP ++
Sbjct: 311 SLQTLP-SPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAP 369
Query: 118 ARGPCSAPVGSRASSGPGLPSAAA 141
P S P+ A+ P P+A A
Sbjct: 370 PSPPASPPLSPLATPSPQAPNALA 393
>gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens]
Length = 1843
Score = 45.1 bits (105), Expect = 9e-05
Identities = 59/215 (27%), Positives = 79/215 (36%), Gaps = 17/215 (7%)
Query: 31 HVPANPAPFHTP----RKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 86
H ++PA TP K L T P P P H+T PP P +
Sbjct: 1293 HSHSSPAGQRTPGGSQTKTPKLDPTMPPKKKPQLPPKPAHLTQSHPPQRLPKPLPLSPSF 1352
Query: 87 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVG-SRASSGPGLPSAAAARPA 145
+ G+ + + G R A P+P + P V G P G S+ S GL S A RP
Sbjct: 1353 SSEVGQREHQRGERDTAIPQPAKVPTTVDQGHIPLARCPSGHSQPSLQHGL-STTAPRPT 1411
Query: 146 RKTLT-CQPRSIESPA------TASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSRRKAG 198
+ T +S E P +S G GP Q G P SP +K
Sbjct: 1412 KNQATGSNAQSSEPPKLNALNHDPTSPQWGPGPSGEQPMEGSHQGAPESPDSLQRNQKEL 1471
Query: 199 HGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLP 233
G +Q Q A+E EA S + L + +P
Sbjct: 1472 QGLLNQVQ----ALEKEAASSVDVQALRRLFEAVP 1502
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 44.7 bits (104), Expect = 1e-04
Identities = 75/312 (24%), Positives = 109/312 (34%), Gaps = 49/312 (15%)
Query: 32 VPANPAPFHTPRKRHPLSHTPHAT-AHPPSSPPPLHITPVL--PPTFPGTQPPRALRLAE 88
+P+ PA F P + P + A PP PP+ P+L PP+ P + +A R
Sbjct: 800 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 859
Query: 89 GSGEGKQEEGRRAQARPRPLRPPWEVRGGAR---GPCSAPVGSRASS----------GPG 135
G G R P PP R + GP A S A+S GP
Sbjct: 860 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE 919
Query: 136 LPSAAAARPARKTLTCQPRS-IESPATASSAGCGSGPRVPQVRLLGPG------------ 182
+AA+ P + C P + PA + G +P GPG
Sbjct: 920 GGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETE 979
Query: 183 GRPSSPARDGSRRKAGHGCTSQSQGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSV 242
G S+ G+ TS + A A + SP + + EL L ++AS++ +
Sbjct: 980 GPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPK-QARLGELPLGALQASVVQHL 1038
Query: 243 VAAVLQLHSYRRPAGDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSA 302
++ L L + AG G GGG G T AA S +
Sbjct: 1039 LSRTLLLAAAEGAAG-------------------GSGGGPGGAEGGGVTGGARAALSDAE 1079
Query: 303 AARGAAAATTID 314
R A + +D
Sbjct: 1080 LGRWAELLSPLD 1091
Score = 39.7 bits (91), Expect = 0.004
Identities = 59/209 (28%), Positives = 76/209 (36%), Gaps = 28/209 (13%)
Query: 30 THVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVL--PPTFPGTQPPRALRLA 87
T P P P P + P S P ++PPP + P+L PP PP +L ++
Sbjct: 721 TPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPP-RVPPLLAAPPLQVPPSPPASLPMS 779
Query: 88 EGSGEGKQEEGRRA----QARPRPLRPPWEVRGGA--RGPCSAPVGSRASSGPGLPSAAA 141
+ Q A QA P PP G A S P+ A+ P P A
Sbjct: 780 PLAKPPPQAPPALATPPLQALP---SPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLA 836
Query: 142 A--------RPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGS 193
A PA TL PR +P +S SGPR+ GP P P+R S
Sbjct: 837 APLLQVPPSPPASPTLQA-PRRPPTPGPDTSV---SGPRLTLALAPGP---PPPPSRSPS 889
Query: 194 RRKAGHGCTSQSQGDAVAMEAEARGSPGG 222
+G S A + E RG G
Sbjct: 890 STLSGPDLAGHS-SSATSTPEELRGYDSG 917
Score = 38.9 bits (89), Expect = 0.006
Identities = 74/291 (25%), Positives = 95/291 (32%), Gaps = 63/291 (21%)
Query: 41 TPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRR 100
+P P+S P AT PP +PPPL P+ P P PP +
Sbjct: 709 SPPASPPMS--PSATP-PPQAPPPLAAPPLQVPPSPPASPPMS----------------- 748
Query: 101 AQARPRPLRPPW----EVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSI 156
A P P PP ++ P S P+ A P P A A P + L P S
Sbjct: 749 PSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALAT-PPLQALPSPPASF 807
Query: 157 ESPATASSAG-------CGSGPRVPQV----RLLGPGGRPSSPARDGSRRKAGHGCTSQS 205
A S + P+ P V L P P+SP RR G +
Sbjct: 808 PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV 867
Query: 206 QGDAVAMEAEARGSPGGRVLMQELTLLPVEASLILSVVAAVLQLHSYRRPAGDTPDPRRG 265
G + + A A G P P S ++ L HS A TP+ RG
Sbjct: 868 SGPRLTL-ALAPGPPP-----------PPSRSPSSTLSGPDLAGHS--SSATSTPEELRG 913
Query: 266 HHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAA-ARGAAAATTIDG 315
+ G GG A+ AA AA +RG A G
Sbjct: 914 Y------------DSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRG 952
Score = 36.2 bits (82), Expect = 0.041
Identities = 43/142 (30%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 47 PLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRLAEGSGEGKQEEGRRAQARPR 106
PLS P AT PP +PP L + P+ P P PP + LA S + P
Sbjct: 610 PLS--PLATP-PPQAPPXLALPPLQAPPSPPASPPLS-PLATPSPQAPNALAVHLLQAPF 665
Query: 107 PLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAG 166
P V+ P S PV A+ P + AA P L P SP + SA
Sbjct: 666 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP----LQVPPSPPASPPMSPSA- 720
Query: 167 CGSGPRVPQVRLLGPGGRPSSP 188
P+ P P P SP
Sbjct: 721 -TPPPQAPPPLAAPPLQVPPSP 741
Score = 33.9 bits (76), Expect = 0.20
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 33/172 (19%)
Query: 4 APKSLNKDEAGDVRGSERRHSTRTRKTHVPANPAPFHTPRKRHPLSH-TPHATAHPPSSP 62
+P + + AG G +R ++R+ + ++ P +P + P + TP A AHP S P
Sbjct: 221 SPAARRRPSAG---GGLQRPASRS----LSSSATPLSSPARSGPSARGTPRAPAHP-SQP 272
Query: 63 PPLHITPVLPP--------TFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLRPPWEV 114
P + + PP P P + LA S G + RP+ PP
Sbjct: 273 KPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSG---------TKARPVPPP--- 320
Query: 115 RGGARGPCSA---PVGSRASSGPGLPSAAAARPARKTLTCQPRSIESPATAS 163
A P A P A+ P P + +A P+ +TL P + S A S
Sbjct: 321 -DNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPS 371
Score = 33.1 bits (74), Expect = 0.35
Identities = 44/169 (26%), Positives = 62/169 (36%), Gaps = 18/169 (10%)
Query: 25 TRTRKTHVPANPA-PFHTPRKRHPLSHTPHATAHP-PSSPPPLHITPVLPPTFPGTQPPR 82
T+ R P N A P P TP A P PS+PP L P P T P PP
Sbjct: 312 TKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPP- 370
Query: 83 ALRLAEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPV---GSRASSGPGLPSA 139
+ Q P P++ P + + +P+ +A++ G P+
Sbjct: 371 ------SMTTPPMQAPPSLQTIP-PIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTL 423
Query: 140 AAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSP 188
A LT PR ++ T+ S + P P L P P+SP
Sbjct: 424 QA---THSFLTMSPRQTQASLTSPSRPASTPPDSPP--LQAPLSLPASP 467
Score = 32.7 bits (73), Expect = 0.45
Identities = 43/163 (26%), Positives = 53/163 (32%), Gaps = 15/163 (9%)
Query: 37 APFHTPRKRHPLSHTPHATAHPPSSP------PPLHITPVLPPTFPGTQPPRALRLAEGS 90
+P +P HPL +H P +P PPL L P P Q P A
Sbjct: 478 SPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAP--PSLQTPPASLTTPPL 535
Query: 91 GEGKQEEGRRAQARPRPLRPPWEVRGGARGPC--SAPVGSRASSGPGLPSAAAARP--AR 146
Q PL P PC AP + P PS+ A P A
Sbjct: 536 ENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAP 595
Query: 147 KTLTCQP-RSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSP 188
L P + + SP + A P+ P L P P SP
Sbjct: 596 PALASPPLQGLPSPPLSPLA--TPPPQAPPXLALPPLQAPPSP 636
Score = 30.8 bits (68), Expect = 1.7
Identities = 30/115 (26%), Positives = 39/115 (33%), Gaps = 12/115 (10%)
Query: 27 TRKTHVPANPAPFHTPRKRHPLSHTPHATAHPPSSPPPLHITPVLPPTFPGTQPPRALRL 86
T P PAP PL+ P T ++PPP + P G P L
Sbjct: 555 TPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPL 614
Query: 87 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAA 141
A QA P PP ++ P S P+ A+ P P+A A
Sbjct: 615 ATPP----------PQAPPXLALPP--LQAPPSPPASPPLSPLATPSPQAPNALA 657
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 44.3 bits (103), Expect = 1e-04
Identities = 66/271 (24%), Positives = 97/271 (35%), Gaps = 37/271 (13%)
Query: 87 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGAR---GPCSAPVGSRASSGPGLPSAAAAR 143
AE +GE G +++ R +P R V G G S ++G +
Sbjct: 506 AEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNK 565
Query: 144 PARKTLTCQPRSIESPATASSAGCGSGPRVPQVRLLGPGGRPSSPARDGSR----RKAGH 199
+R +PR A A+ G G + P + G S G + + AG
Sbjct: 566 QSRGGGGNKPRQWGQTAAAAKTR-GGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGT 624
Query: 200 GCTSQS------QGDAVAME------AEARGSPGGRVLMQELTLLPVEASLILSVVAAVL 247
G S+ Q DA A E A +RGS G + Q+ P A S AAV
Sbjct: 625 GAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQK----PAAAGSESSAAAAVG 680
Query: 248 QLHSYRRPAGDTPDPRRG-------------HHRHRRRQRGGGRGGGGRGGREAAATVHG 294
Q R+ RG R ++ + G RGGGG R +
Sbjct: 681 QEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSR 740
Query: 295 NAAASSSAAARGAAAATTIDGGGKEDAAGAG 325
+ + S + + AAA+ + GGG + G G
Sbjct: 741 GSGGAKSRSGKKAAASKSHGGGGAKRRRGGG 771
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/270 (23%), Positives = 97/270 (35%), Gaps = 60/270 (22%)
Query: 87 AEGSGEGKQEEGRRAQARPRPLRPPWEVRGGARGP--------CSAPVGSRASSGPGLPS 138
A G+ + G++ + R W+ GA G +A G+++ G G
Sbjct: 64 AAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKP 123
Query: 139 AAAARPARKTLTCQPR-SIESPATASSAGCGSGPR----VPQVRLLGPGGRPSSPARDGS 193
+ A T + +PR + A A S G+G + V+ G G +P A G+
Sbjct: 124 RRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQG-GEKPQKAAAAGA 182
Query: 194 RRKAG-----HGCTSQSQGDAVAMEAEARG----SPGGRVLMQELTLLPVEASLILSVVA 244
+ ++G G S+ D + EA+ + GGR
Sbjct: 183 KSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGR--------------------- 221
Query: 245 AVLQLHSYRRPAGDTPDPRRGHHRHRRRQR---------GGGRGGGGRGGREAAATVHGN 295
+ H +PA RRG + ++QR G R G RGG + G
Sbjct: 222 --RKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQ 279
Query: 296 AAASSSAAARGAAAATTIDGGGKEDAAGAG 325
AA + A RGAA A G K A G G
Sbjct: 280 NAALAGAKRRGAATA-----GEKPAAKGRG 304
Score = 28.9 bits (63), Expect = 6.5
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 257 GDTPDPRRGHHRHRRRQRGGGRGGGGRGGREAAATVHGNAAASSSAAARG---------A 307
G + PRR + + + G R GGG+ R AA + A +RG +
Sbjct: 422 GGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKAR-QKAAEAGAESRGDKKQGRQKAS 480
Query: 308 AAATTIDGGGKEDAAG 323
AA T GGG + +G
Sbjct: 481 AAGTKSRGGGLKSHSG 496
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,736,112
Number of Sequences: 37866
Number of extensions: 1225412
Number of successful extensions: 15155
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 1361
Number of HSP's that attempted gapping in prelim test: 9683
Number of HSP's gapped (non-prelim): 5541
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.