Search of human proteins with 239750361

Search of human proteins with 239750361

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750361 PREDICTED: hypothetical protein XP_002347406 [Homo
sapiens]
         (82 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755857 PREDICTED: hypothetical protein [Homo sapiens]           171   2e-43
gi|239750361 PREDICTED: hypothetical protein XP_002347406 [Homo ...   171   2e-43
gi|239744665 PREDICTED: hypothetical protein XP_002343232 [Homo ...   171   2e-43
gi|41152235 ubiquitin specific protease 51 [Homo sapiens]              38   0.002
gi|31442420 shroom family member 1 [Homo sapiens]                      38   0.002
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]        35   0.017
gi|197276670 spermatogenesis and centriole associated 1 isoform ...    34   0.029
gi|197276668 spermatogenesis and centriole associated 1 isoform ...    34   0.029
gi|203098098 shroom family member 3 protein [Homo sapiens]             33   0.037
gi|24308265 methyltransferase like 14 [Homo sapiens]                   33   0.064
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        32   0.083
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]            31   0.19 
gi|154277120 spectrin repeat containing, nuclear envelope 1 isof...    31   0.19 
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof...    31   0.19 
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    31   0.19 
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    31   0.19 
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]          31   0.19 
gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]          31   0.19 
gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]          31   0.19 
gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]          31   0.19 
gi|27262651 ataxin 2 related protein isoform D [Homo sapiens]          31   0.19 
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]            31   0.24 
gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]            31   0.24 
gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]            31   0.24 
gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Hom...    30   0.32 
gi|13376611 zinc finger protein 703 [Homo sapiens]                     30   0.41 
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]            30   0.41 
gi|239753158 PREDICTED: hypothetical protein XP_002345577 [Homo ...    30   0.41 
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]            30   0.41 
gi|239747728 PREDICTED: hypothetical protein XP_002348255 [Homo ...    30   0.41 

>gi|239755857 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 82

 Score =  171 bits (432), Expect = 2e-43
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 1  MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG 60
          MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG
Sbjct: 1  MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG 60

Query: 61 RSRIADRLRGDPGTGRDGGTHR 82
          RSRIADRLRGDPGTGRDGGTHR
Sbjct: 61 RSRIADRLRGDPGTGRDGGTHR 82


>gi|239750361 PREDICTED: hypothetical protein XP_002347406 [Homo
          sapiens]
          Length = 82

 Score =  171 bits (432), Expect = 2e-43
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 1  MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG 60
          MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG
Sbjct: 1  MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG 60

Query: 61 RSRIADRLRGDPGTGRDGGTHR 82
          RSRIADRLRGDPGTGRDGGTHR
Sbjct: 61 RSRIADRLRGDPGTGRDGGTHR 82


>gi|239744665 PREDICTED: hypothetical protein XP_002343232 [Homo
          sapiens]
          Length = 82

 Score =  171 bits (432), Expect = 2e-43
 Identities = 82/82 (100%), Positives = 82/82 (100%)

Query: 1  MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG 60
          MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG
Sbjct: 1  MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG 60

Query: 61 RSRIADRLRGDPGTGRDGGTHR 82
          RSRIADRLRGDPGTGRDGGTHR
Sbjct: 61 RSRIADRLRGDPGTGRDGGTHR 82


>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
          Length = 711

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 12  RSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRLRGD 71
           RS +  GL  P   P  P  PP      A      WRG  RRSRPG+R ++R +    GD
Sbjct: 113 RSRSQPGLSAPPPPPARPPPPPPPPPPPAPRPRA-WRGSRRRSRPGSRPQTRRS--CSGD 169

Query: 72  -PGTGRDGG 79
             G+G  GG
Sbjct: 170 LDGSGDPGG 178


>gi|31442420 shroom family member 1 [Homo sapiens]
          Length = 847

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 12/78 (15%)

Query: 17  LGLRVPAAT-PKTPRQPPSTSSSSAGLQEGRWRGLPRRSR---PGARGRSRIADRLR--- 69
           L + +PA   P  P +PP+T   SA L      G P RSR   PG  GR  +A++ R   
Sbjct: 163 LRMSLPARLRPTVPARPPATHPRSASLSHPGGEGEPARSRAPAPGTAGRGPLANQQRKWC 222

Query: 70  -GDPG----TGRDGGTHR 82
             +PG     GR GG  R
Sbjct: 223 FSEPGKLDRVGRGGGPAR 240


>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
          Length = 753

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 1   MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARG 60
           +PP      ++R      LR   A P+ PRQPP        LQ  RW  L +   P +R 
Sbjct: 142 LPPGVQEARTLRPDGG-ALRAQEAIPREPRQPPPEPELQCRLQVVRWLQLWQPRIPSSRL 200

Query: 61  RSRIADRLRGDP----GTGRDGGTHR 82
               AD   GD     G G  GGT R
Sbjct: 201 APISADP-GGDAVAKWGCGPSGGTRR 225


>gi|197276670 spermatogenesis and centriole associated 1 isoform 2
           [Homo sapiens]
          Length = 441

 Score = 33.9 bits (76), Expect = 0.029
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 9   SSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRL 68
           S + +S T  L VP   P     PP TSSS A + + R    PR + P  +    +  +L
Sbjct: 366 SRMHNSPTQNLPVPHCPPHNAHSPPRTSSSPASVNDSRG---PRTTEPSTKSMMEVERKL 422


>gi|197276668 spermatogenesis and centriole associated 1 isoform 1
           [Homo sapiens]
          Length = 591

 Score = 33.9 bits (76), Expect = 0.029
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 9   SSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRL 68
           S + +S T  L VP   P     PP TSSS A + + R    PR + P  +    +  +L
Sbjct: 366 SRMHNSPTQNLPVPHCPPHNAHSPPRTSSSPASVNDSRG---PRTTEPSTKSMMEVERKL 422


>gi|203098098 shroom family member 3 protein [Homo sapiens]
          Length = 1996

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%)

Query: 2    PPSTSSWSSVRSSTTLGLRVP----AATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPG 57
            P ++ SW    SS  +GLR P    +A+P TPR+  S + +   L     R +P  +R G
Sbjct: 951  PVASRSWRPRPSSAHVGLRSPEASASASPHTPRERHSVTPAEGDLA----RPVPPAARRG 1006

Query: 58   ARGR 61
            AR R
Sbjct: 1007 ARRR 1010



 Score = 28.9 bits (63), Expect = 0.92
 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 23/81 (28%)

Query: 4    STSSWSSVRSSTTLGLR----VPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGAR 59
            S SS SS+R  +    R    +PA   +T + P   SSS AG                  
Sbjct: 1135 SASSLSSLREPSLQPRREATLLPATVAETQQAPRDRSSSFAG------------------ 1176

Query: 60   GRSRIADRLRGDPGTGRDGGT 80
            GR R+ +R RGD  +G +GGT
Sbjct: 1177 GR-RLGERRRGDLLSGANGGT 1196


>gi|24308265 methyltransferase like 14 [Homo sapiens]
          Length = 456

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 29  PRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRLRGDPG--TGRDGGTHR 82
           P+ PP  S S  G   G  RG  R      RGR R     RG+ G   G  GG HR
Sbjct: 397 PKSPPPKSKSDRG--GGAPRGGGRGGTSAGRGRERNRSNFRGERGGFRGGRGGAHR 450


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 18/58 (31%), Positives = 32/58 (55%)

Query: 1    MPPSTSSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGA 58
            + P     + + S+ ++   V  A P+TP +  S+S+SS  +++G  R   RRSR G+
Sbjct: 1386 LSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTPSRRSRSGS 1443



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 20/64 (31%), Positives = 24/64 (37%)

Query: 7   SWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIAD 66
           S S  R S     R PA   ++  + P+    S      R  G  R   P  RGRSR   
Sbjct: 637 SRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRT 696

Query: 67  RLRG 70
             RG
Sbjct: 697 PRRG 700


>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 113

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 27 KTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRLRGDPGTGRDGG 79
          + P    S  +   G   G WR  PRR RPG    S  A   RG    GR GG
Sbjct: 17 RAPSGGGSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPA---RGAAAWGRSGG 66


>gi|154277120 spectrin repeat containing, nuclear envelope 1 isoform
           3 [Homo sapiens]
          Length = 982

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 6   SSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIA 65
           SSWSS     T G   P +   TP +  +     +  Q G     P  S P +R     +
Sbjct: 855 SSWSSADELDTSGSVSPTSGRSTPNRQKTPRGKCSLSQPG-----PSVSSPHSRSTKGGS 909

Query: 66  DRLRGDPGTGRDG 78
           D    +PG GR G
Sbjct: 910 DSSLSEPGPGRSG 922


>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
            [Homo sapiens]
          Length = 3321

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 6    SSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIA 65
            SSWSS     T G   P +   TP +  +     +  Q G     P  S P +R     +
Sbjct: 3194 SSWSSADELDTSGSVSPTSGRSTPNRQKTPRGKCSLSQPG-----PSVSSPHSRSTKGGS 3248

Query: 66   DRLRGDPGTGRDG 78
            D    +PG GR G
Sbjct: 3249 DSSLSEPGPGRSG 3261


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 6    SSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIA 65
            SSWSS     T G   P +   TP +  +     +  Q G     P  S P +R     +
Sbjct: 8622 SSWSSADELDTSGSVSPTSGRSTPNRQKTPRGKCSLSQPG-----PSVSSPHSRSTKGGS 8676

Query: 66   DRLRGDPGTGRDG 78
            D    +PG GR G
Sbjct: 8677 DSSLSEPGPGRSG 8689


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 6    SSWSSVRSSTTLGLRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIA 65
            SSWSS     T G   P +   TP +  +     +  Q G     P  S P +R     +
Sbjct: 8670 SSWSSADELDTSGSVSPTSGRSTPNRQKTPRGKCSLSQPG-----PSVSSPHSRSTKGGS 8724

Query: 66   DRLRGDPGTGRDG 78
            D    +PG GR G
Sbjct: 8725 DSSLSEPGPGRSG 8737


>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
          Length = 1062

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 30  RQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRLRGDPG 73
           RQ     S S   +EG++  LP+R R G RG  R +    G PG
Sbjct: 332 RQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSSRGGRPG 375


>gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]
          Length = 1044

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 30  RQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRLRGDPG 73
           RQ     S S   +EG++  LP+R R G RG  R +    G PG
Sbjct: 332 RQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSSRGGRPG 375


>gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]
          Length = 1097

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 30  RQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRLRGDPG 73
           RQ     S S   +EG++  LP+R R G RG  R +    G PG
Sbjct: 332 RQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSSRGGRPG 375


>gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]
          Length = 1075

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 30  RQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRLRGDPG 73
           RQ     S S   +EG++  LP+R R G RG  R +    G PG
Sbjct: 332 RQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSSRGGRPG 375


>gi|27262651 ataxin 2 related protein isoform D [Homo sapiens]
          Length = 1044

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 30  RQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRLRGDPG 73
           RQ     S S   +EG++  LP+R R G RG  R +    G PG
Sbjct: 332 RQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSSRGGRPG 375


>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 10/64 (15%)

Query: 22  PAATPKTPR---QPPSTSSSSAG-------LQEGRWRGLPRRSRPGARGRSRIADRLRGD 71
           P  TP  P     PPS ++++A        L  G+WR LPRR    A G +      R  
Sbjct: 194 PTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRAL 253

Query: 72  PGTG 75
           P +G
Sbjct: 254 PASG 257


>gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 10/64 (15%)

Query: 22  PAATPKTPR---QPPSTSSSSAG-------LQEGRWRGLPRRSRPGARGRSRIADRLRGD 71
           P  TP  P     PPS ++++A        L  G+WR LPRR    A G +      R  
Sbjct: 194 PTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRAL 253

Query: 72  PGTG 75
           P +G
Sbjct: 254 PASG 257


>gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 10/64 (15%)

Query: 22  PAATPKTPR---QPPSTSSSSAG-------LQEGRWRGLPRRSRPGARGRSRIADRLRGD 71
           P  TP  P     PPS ++++A        L  G+WR LPRR    A G +      R  
Sbjct: 194 PTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRAL 253

Query: 72  PGTG 75
           P +G
Sbjct: 254 PASG 257


>gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Homo
           sapiens]
          Length = 501

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 19  LRVPAATPKTPRQPPSTSSSSAGLQEGRWRGLPRRSRPGARGRSRIADRLRGDPG 73
           LR   A P+ PRQPP        LQ  RW  L +   P     SR+A  +  DPG
Sbjct: 349 LRAQEAIPREPRQPPPEPELQCRLQVVRWLQLWQPRIPS----SRLAP-ISADPG 398


>gi|13376611 zinc finger protein 703 [Homo sapiens]
          Length = 590

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 4   STSSWSSVRSSTTLGLRVPAAT--PKTPRQPPSTSSSSAGLQEGRWRGLPRRS 54
           STSS SS       G RVP+A   P  P   P ++SSS+    G   G P  S
Sbjct: 177 STSSSSSSSPGDKAGFRVPSAACPPFPPHGAPVSASSSSSSPGGSRGGSPHHS 229


>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 281

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 18  GLRVPAATPKTPRQPPSTSSSSAGLQEGRWRG---LPRRSRPGARGRSRIADRLRGDPGT 74
           G+   AA P T R PP   +SS    E  W       RR  P  R R+R     R  PG+
Sbjct: 192 GVASAAAGPATLRAPPGRGASS----ETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGS 247

Query: 75  GR 76
           GR
Sbjct: 248 GR 249


>gi|239753158 PREDICTED: hypothetical protein XP_002345577 [Homo
           sapiens]
          Length = 342

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 41  GLQEGRWRGLPRRSRPGARGRSRIADRLRGDPGTGRDGG 79
           G ++  WRG  RR R  AR   R+   LRGD G+GR GG
Sbjct: 194 GSRQRGWRGHGRRHR--ARVPRRLP--LRGDGGSGRQGG 228


>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 18  GLRVPAATPKTPRQPPSTSSSSAGLQEGRWRG---LPRRSRPGARGRSRIADRLRGDPGT 74
           G+   AA P T R PP   +SS    E  W       RR  P  R R+R     R  PG+
Sbjct: 313 GVASAAAGPATLRAPPGRGASS----ETMWPTENLSSRRRAPPQRRRTRAPSIARSLPGS 368

Query: 75  GR 76
           GR
Sbjct: 369 GR 370


>gi|239747728 PREDICTED: hypothetical protein XP_002348255 [Homo
           sapiens]
          Length = 342

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)

Query: 41  GLQEGRWRGLPRRSRPGARGRSRIADRLRGDPGTGRDGG 79
           G ++  WRG  RR R  AR   R+   LRGD G+GR GG
Sbjct: 194 GSRQRGWRGHGRRHR--ARVPRRLP--LRGDGGSGRQGG 228


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.128    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,395,814
Number of Sequences: 37866
Number of extensions: 209522
Number of successful extensions: 1720
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 1492
Number of HSP's gapped (non-prelim): 384
length of query: 82
length of database: 18,247,518
effective HSP length: 54
effective length of query: 28
effective length of database: 16,202,754
effective search space: 453677112
effective search space used: 453677112
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.