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Search of human proteins with 239750217
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750217 PREDICTED: hypothetical protein [Homo sapiens]
(363 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750217 PREDICTED: hypothetical protein [Homo sapiens] 762 0.0
gi|239744524 PREDICTED: hypothetical protein XP_002343168 [Homo ... 762 0.0
gi|239755705 PREDICTED: hypothetical protein [Homo sapiens] 502 e-142
gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo ... 47 2e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 47 2e-05
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 47 3e-05
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 47 3e-05
gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 47 3e-05
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 46 5e-05
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 46 6e-05
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 46 6e-05
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 45 8e-05
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 45 8e-05
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 45 8e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 45 8e-05
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 44 2e-04
gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo ... 44 3e-04
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 44 3e-04
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 43 4e-04
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 43 4e-04
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 43 4e-04
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 43 4e-04
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 43 4e-04
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 43 4e-04
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 43 4e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 43 5e-04
gi|150378539 piccolo isoform 1 [Homo sapiens] 43 5e-04
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 43 5e-04
gi|46909598 a disintegrin and metalloproteinase domain 15 isofor... 42 7e-04
gi|50428940 mediator complex subunit 25 [Homo sapiens] 42 7e-04
>gi|239750217 PREDICTED: hypothetical protein [Homo sapiens]
Length = 363
Score = 762 bits (1968), Expect = 0.0
Identities = 363/363 (100%), Positives = 363/363 (100%)
Query: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG
Sbjct: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
Query: 61 EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN
Sbjct: 61 EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA
Sbjct: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
Query: 181 LWLGEWRRGRLGTSRPEFKCYQRQLICSGLRFRVLCGIGRSVDGEGAAALWHGLGRGCLA 240
LWLGEWRRGRLGTSRPEFKCYQRQLICSGLRFRVLCGIGRSVDGEGAAALWHGLGRGCLA
Sbjct: 181 LWLGEWRRGRLGTSRPEFKCYQRQLICSGLRFRVLCGIGRSVDGEGAAALWHGLGRGCLA 240
Query: 241 LSRLVGRPSQHEQTQGGAYLPQFYSSPEWYSEKKFHWDTWYLRLWQSGGLGGGKELQMLT 300
LSRLVGRPSQHEQTQGGAYLPQFYSSPEWYSEKKFHWDTWYLRLWQSGGLGGGKELQMLT
Sbjct: 241 LSRLVGRPSQHEQTQGGAYLPQFYSSPEWYSEKKFHWDTWYLRLWQSGGLGGGKELQMLT 300
Query: 301 SRQPGVERALGVAAVPAVLPGICPHPASSQPLGASSRAAQTFLPLSPLPQRAHPCTCSHP 360
SRQPGVERALGVAAVPAVLPGICPHPASSQPLGASSRAAQTFLPLSPLPQRAHPCTCSHP
Sbjct: 301 SRQPGVERALGVAAVPAVLPGICPHPASSQPLGASSRAAQTFLPLSPLPQRAHPCTCSHP 360
Query: 361 RKS 363
RKS
Sbjct: 361 RKS 363
>gi|239744524 PREDICTED: hypothetical protein XP_002343168 [Homo
sapiens]
Length = 363
Score = 762 bits (1968), Expect = 0.0
Identities = 363/363 (100%), Positives = 363/363 (100%)
Query: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG
Sbjct: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
Query: 61 EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN
Sbjct: 61 EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA
Sbjct: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
Query: 181 LWLGEWRRGRLGTSRPEFKCYQRQLICSGLRFRVLCGIGRSVDGEGAAALWHGLGRGCLA 240
LWLGEWRRGRLGTSRPEFKCYQRQLICSGLRFRVLCGIGRSVDGEGAAALWHGLGRGCLA
Sbjct: 181 LWLGEWRRGRLGTSRPEFKCYQRQLICSGLRFRVLCGIGRSVDGEGAAALWHGLGRGCLA 240
Query: 241 LSRLVGRPSQHEQTQGGAYLPQFYSSPEWYSEKKFHWDTWYLRLWQSGGLGGGKELQMLT 300
LSRLVGRPSQHEQTQGGAYLPQFYSSPEWYSEKKFHWDTWYLRLWQSGGLGGGKELQMLT
Sbjct: 241 LSRLVGRPSQHEQTQGGAYLPQFYSSPEWYSEKKFHWDTWYLRLWQSGGLGGGKELQMLT 300
Query: 301 SRQPGVERALGVAAVPAVLPGICPHPASSQPLGASSRAAQTFLPLSPLPQRAHPCTCSHP 360
SRQPGVERALGVAAVPAVLPGICPHPASSQPLGASSRAAQTFLPLSPLPQRAHPCTCSHP
Sbjct: 301 SRQPGVERALGVAAVPAVLPGICPHPASSQPLGASSRAAQTFLPLSPLPQRAHPCTCSHP 360
Query: 361 RKS 363
RKS
Sbjct: 361 RKS 363
>gi|239755705 PREDICTED: hypothetical protein [Homo sapiens]
Length = 306
Score = 502 bits (1293), Expect = e-142
Identities = 248/274 (90%), Positives = 248/274 (90%), Gaps = 25/274 (9%)
Query: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG
Sbjct: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
Query: 61 EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
EKVQPQVLAFPGKSS PPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN
Sbjct: 61 EKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA
Sbjct: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
Query: 181 LWLGEWRR-------------------------GRLGTSRPEFKCYQRQLICSGLRFRVL 215
LWLGEWRR GRLGTSRPEFKCYQRQLICSGLRFRVL
Sbjct: 181 LWLGEWRRVEKTFRPSCGIHANGWAQDWVFGLAGRLGTSRPEFKCYQRQLICSGLRFRVL 240
Query: 216 CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPS 249
CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPS
Sbjct: 241 CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPS 274
>gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo
sapiens]
Length = 220
Score = 47.4 bits (111), Expect = 2e-05
Identities = 50/167 (29%), Positives = 61/167 (36%), Gaps = 40/167 (23%)
Query: 67 VLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGE 126
++ P + PPS G P P+ RPPP+P L DE+ A + P G
Sbjct: 37 IIDLPDSYAAPPSPGAAPAPAGRPPPAPS-------LMDESWFVTPPACFTAEGP---GL 86
Query: 127 GPAR---------------------PSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARR 165
GPAR ST L P +P G E PARR
Sbjct: 87 GPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEG-ELTPARR 145
Query: 166 RPAPAPPLLPLPSRALWL---GEWRRGRLGTSRPE-----FKCYQRQ 204
P A PLP+RA L G+ RR + R E K QRQ
Sbjct: 146 EPRAARHAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQ 192
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 47.4 bits (111), Expect = 2e-05
Identities = 51/179 (28%), Positives = 62/179 (34%), Gaps = 39/179 (21%)
Query: 26 VCEMRGRR---EQRRGPFRLCSASNSRLLVRLFLRG-----NGEKVQPQVLAFPGKSSPP 77
+C M RR E R L R ++R+ +G N +VQP P + + P
Sbjct: 54 ICRMVRRRHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQP-----PRRGATP 108
Query: 78 PS--------------AGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSS 123
P+ A P P P+ PPP+P PA A AAA A P S
Sbjct: 109 PAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPA-RAPRAAAAAATA------PPS 161
Query: 124 TGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRP-----ARRRPAPAPPLLPLP 177
G P Q A P P P G P AR P P PP P P
Sbjct: 162 PGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAP 220
Score = 33.1 bits (74), Expect = 0.40
Identities = 42/137 (30%), Positives = 46/137 (33%), Gaps = 21/137 (15%)
Query: 62 KVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINP 121
+ P +A PPP P PP +PPP P Q E A AG G P
Sbjct: 198 RAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQP--------QPPPEGGAVRAG-GAARP 248
Query: 122 SST--------GEGPARPSTQTLRRSGAFPCESVGVPG--ARPGRGAEGRPARRRPAPAP 171
S G G A R G E G R GA P RP AP
Sbjct: 249 VSLREVVRYLGGSGGAGGRLTRGRVQGLLE-EEAAARGRLERTRLGALALPRGDRPGRAP 307
Query: 172 PLLPL-PSRALWLGEWR 187
P PSR+ GE R
Sbjct: 308 PAASARPSRSKRGGEER 324
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 47.0 bits (110), Expect = 3e-05
Identities = 36/109 (33%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 74 SSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPARPST 133
++ P G PPP+ PPP PPR + A A G G +P +
Sbjct: 768 AAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETE 827
Query: 134 QTLRRSGAFP----CESVGVPGARPGRGAE-GRPARRRPAPAPPLLPLP 177
GAFP E GVP RP E P RP P P LPLP
Sbjct: 828 TPFSPEGAFPGGGAAEEEGVP--RPRAPPEPPDPGAPRPPPDPGPLPLP 874
Score = 37.0 bits (84), Expect = 0.028
Identities = 41/148 (27%), Positives = 49/148 (33%), Gaps = 35/148 (23%)
Query: 68 LAFPGKSSPPPSAGP---------TP------PPSSRPPPSPPRRRRPA-----WLQDEA 107
L FP + PP GP TP P P P R PA ++
Sbjct: 1038 LRFPRNTERPPETGPWRAPGPWEKTPESWGPAPTIGEPAPETSLERAPAPSAVVSSRNGG 1097
Query: 108 EVAAALAG----YGFINPSS------TGEGPARPSTQTLR--RSGAFPCESVGVPGARPG 155
E A G G + P + TG P P L G P + PG PG
Sbjct: 1098 ETAPGPLGPAPKNGTLEPGTERRAPETGGAPRAPGAGRLDLGSGGRAPVGTGTAPGGGPG 1157
Query: 156 RGAEGRPA---RRRPAPAPPLLPLPSRA 180
G + + RP P PP LP P A
Sbjct: 1158 SGVDAKAGWVDNTRPQPPPPPLPPPPEA 1185
Score = 32.7 bits (73), Expect = 0.52
Identities = 20/76 (26%), Positives = 30/76 (39%)
Query: 76 PPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPARPSTQT 135
PP P PPP P P P R +P ++ + ++ + + GE A
Sbjct: 856 PPDPGAPRPPPDPGPLPLPGPREKPTFVVQVSTEQLLMSLREDVTRNLLGEKGATARETG 915
Query: 136 LRRSGAFPCESVGVPG 151
R++G P VPG
Sbjct: 916 PRKAGRGPGNREKVPG 931
Score = 30.0 bits (66), Expect = 3.4
Identities = 37/125 (29%), Positives = 48/125 (38%), Gaps = 27/125 (21%)
Query: 53 RLFL-----RGNGEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEA 107
RLFL +GN E+++ + L+ + PP + P P P R RP W +A
Sbjct: 1238 RLFLDLGPPQGNSEQIKAR-LSRLSLALPPLTLTPFPGPGPR---------RPPWEGADA 1287
Query: 108 EVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPG-RGAEGRPARRR 166
A AG + GPA + E PGA G RG P R R
Sbjct: 1288 GAAGGEAG------GAGAPGPAEEDGED-EDEDEEEDEEAAAPGAAAGPRG----PGRAR 1336
Query: 167 PAPAP 171
AP P
Sbjct: 1337 AAPVP 1341
Score = 29.6 bits (65), Expect = 4.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 82 PTPPPSSRPPPSPPRRRRPAWLQDEAEVA 110
P PPP PP + PRR PA + EVA
Sbjct: 1174 PPPPPLPPPPEAQPRRLEPAPPRARPEVA 1202
Score = 28.9 bits (63), Expect = 7.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 71 PGKSSPPPSAGPTPPPSSRPPPS 93
PG PPP GP P P R P+
Sbjct: 859 PGAPRPPPDPGPLPLPGPREKPT 881
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 46.6 bits (109), Expect = 3e-05
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 15/114 (13%)
Query: 65 PQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSST 124
P+++ P P +A P PPP + PP +P R P + YG + P++
Sbjct: 755 PRLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAP-----------RTSPYGGL-PAAP 802
Query: 125 GEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPS 178
GPA P+ + R S +P PG A RPA + P L P P+
Sbjct: 803 LAGPALPARRLSRASRPLSASQPSLPHGAPGPAASTRPA---SSSTPRLGPTPA 853
Score = 40.0 bits (92), Expect = 0.003
Identities = 35/108 (32%), Positives = 40/108 (37%), Gaps = 15/108 (13%)
Query: 57 RGNGEKV--QPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALA 114
RG G + P PG PPP A P P PPP+PP PA Q A
Sbjct: 4 RGGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEA--- 60
Query: 115 GYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRP 162
+ P + EG R RS C G PGA A+G P
Sbjct: 61 ----LPPEAADEGGPRGRL----RSRDSSCGRPGTPGA--ASTAKGSP 98
>gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6
preproprotein [Homo sapiens]
Length = 863
Score = 46.6 bits (109), Expect = 3e-05
Identities = 41/135 (30%), Positives = 50/135 (37%), Gaps = 5/135 (3%)
Query: 41 RLCSASNSRLLVRLFLRGNGEKVQPQVLAFPGKSSPPPSAGPTPPPSSRP-PPSPPRRRR 99
RLC R G E+ P A + + SA P P SRP PP P +R
Sbjct: 724 RLCQLKGPTCQYRAAQSGPSERPGPPQRALLARGTKQASALSFPAPPSRPLPPDPVSKRL 783
Query: 100 PAWLQDEAEVAAALAGYGFINPSSTGEGPAR--PSTQTLRRSGAFPCESVGVPGARPGRG 157
A L D + S +GPA+ P + L C S +PG PG G
Sbjct: 784 QAELADRPNPPTRPLPADPVVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPG--PGAG 841
Query: 158 AEGRPARRRPAPAPP 172
RPAP PP
Sbjct: 842 IPPLVVPSRPAPPPP 856
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 46.2 bits (108), Expect = 5e-05
Identities = 54/170 (31%), Positives = 68/170 (40%), Gaps = 32/170 (18%)
Query: 68 LAFPGKSSPPPSAGPTPPPS-------SRPPPSPPRRRR------PAWLQDEAEVAA-AL 113
L FP P S PTPPP+ + PPP PPR + PA Q +A +
Sbjct: 908 LQFPPSQGPHKS--PTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLERFHQ 965
Query: 114 AGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPA--- 170
G I + G PA P T T P SV V G P G P+ PAPA
Sbjct: 966 VPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPS-GTPTAPS-HAPAPAPMA 1023
Query: 171 ----PPLLPLPSRAL-----WLGEWRRGRLGTSRPEFKCYQRQLICSGLR 211
PPLLP ++A L + G +P Y+ +L SGL+
Sbjct: 1024 ATGLPPLLPAENKAFASNLPTLNVAKAASSGPGKPSGLQYESKL--SGLK 1071
Score = 35.8 bits (81), Expect = 0.062
Identities = 47/167 (28%), Positives = 63/167 (37%), Gaps = 18/167 (10%)
Query: 9 NSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLR---GNGEKVQP 65
+SL+ + S S E + R P + A SR+ ++L ++ G + V
Sbjct: 1266 SSLSSSSSSSSAASSLDADEDGPMPSRNRPPIKTYEA-RSRIGLKLKIKQEAGLSKVVHN 1324
Query: 66 QVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTG 125
L + PPP+ P RPPP PP + D AA P T
Sbjct: 1325 TALDPVHQPPPPPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPER-----KPLGTA 1379
Query: 126 -EGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAP 171
P P +T R E+VG PGA G A GR PAP P
Sbjct: 1380 PHCPRLPLRKTYR-------ENVGGPGAPEGTPA-GRARGGSPAPLP 1418
Score = 33.5 bits (75), Expect = 0.31
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 5/118 (4%)
Query: 64 QPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSS 123
QP P S P PPP+ P P+ P + + A+ A I ++
Sbjct: 707 QPLSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAA 766
Query: 124 TGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPAR----RRPAPAPPLLPLP 177
+GP S+ +L +S +P P R P+R RP PPL P P
Sbjct: 767 PLKGPGPSSSPSLPHQAPLG-DSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCP 823
Score = 31.2 bits (69), Expect = 1.5
Identities = 33/120 (27%), Positives = 42/120 (35%), Gaps = 24/120 (20%)
Query: 71 PGKSSPPPSAGPTPPPS-----SRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI------ 119
P SP P+ P+ PPS SRPP PP P + L G I
Sbjct: 789 PHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCP-----PPQAPPTLPGIFVIQNQLGV 843
Query: 120 -----NPSSTGEGPARP--STQTLRRSGAFPCESVGVPGARPGR-GAEGRPARRRPAPAP 171
NP+ T GP +P Q+ G P P + + + R PAP P
Sbjct: 844 PPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTP 903
Score = 29.6 bits (65), Expect = 4.4
Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 21/117 (17%)
Query: 63 VQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPS 122
+Q Q+ P S+P P+A P P RP PP L + PS
Sbjct: 837 IQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPE--------------GPLPPAPHLPPS 882
Query: 123 STGEGPARPSTQTLRRSGAFPCE-SVGVPGARPGRGAEGRPARRRPAPAPPLLPLPS 178
ST A S + R P + + P P +G P P P L+P P+
Sbjct: 883 STSSAVASSSETSSRLPAPTPSDFQLQFP---PSQGPHKSPT---PPPTLHLVPEPA 933
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 45.8 bits (107), Expect = 6e-05
Identities = 36/116 (31%), Positives = 45/116 (38%), Gaps = 20/116 (17%)
Query: 71 PGKSSPPPSAGPTPPPSSRPPPSPPRR----------RRPAWLQDEAEVAAALAGYGFIN 120
PG+ S PP GP P RP PP R + AW Q + A +
Sbjct: 157 PGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLL 216
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
PS+ RP+ + + A G+R GRG RPA R A PPL L
Sbjct: 217 PSAKPARAPRPAPRAREEAAA---------GSR-GRGGAERPAARGSAQQPPLARL 262
Score = 30.4 bits (67), Expect = 2.6
Identities = 45/153 (29%), Positives = 53/153 (34%), Gaps = 17/153 (11%)
Query: 41 RLCSASNSRLLVRLFLRGNGEKVQPQVLAFP------GKSSPPPSAGPTPPPSSRPPPSP 94
RL SAS RL L G + P + FP + SP P P SR
Sbjct: 284 RLGSASPPRLAAPLA----GSRA-PSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVV 338
Query: 95 PRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARP 154
RRR +E V G +P GPA P RR+ + G PG P
Sbjct: 339 GARRRRGG--EERRVRGRRQGCALGSPPIPA-GPAAPGRAGERRAARQWRKRGGGPGVSP 395
Query: 155 GRGAEGRPARRRPAP---APPLLPLPSRALWLG 184
GA+G R P PS A W G
Sbjct: 396 REGAQGEGVRGGVTPRARGSSTCLRPSPATWQG 428
Score = 29.6 bits (65), Expect = 4.4
Identities = 37/134 (27%), Positives = 50/134 (37%), Gaps = 16/134 (11%)
Query: 57 RGNGE--KVQPQVLAFPGKSS----PPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVA 110
RG+G + QP+ A+ +SS P S S P P R RPA E A
Sbjct: 183 RGSGRVPRGQPEQQAWEQRSSHFLAPEGSVA-----SLLPSAKPARAPRPAPRAREEAAA 237
Query: 111 AALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESV--GVPGARPGRGAEGRPARRRP- 167
+ G P++ G P + L S S+ P +P G+ P P
Sbjct: 238 GSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPL 297
Query: 168 --APAPPLLPLPSR 179
+ AP L P P R
Sbjct: 298 AGSRAPSLSPFPRR 311
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 45.8 bits (107), Expect = 6e-05
Identities = 36/116 (31%), Positives = 45/116 (38%), Gaps = 20/116 (17%)
Query: 71 PGKSSPPPSAGPTPPPSSRPPPSPPRR----------RRPAWLQDEAEVAAALAGYGFIN 120
PG+ S PP GP P RP PP R + AW Q + A +
Sbjct: 157 PGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLL 216
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
PS+ RP+ + + A G+R GRG RPA R A PPL L
Sbjct: 217 PSAKPARAPRPAPRAREEAAA---------GSR-GRGGAERPAARGSAQQPPLARL 262
Score = 30.4 bits (67), Expect = 2.6
Identities = 45/153 (29%), Positives = 53/153 (34%), Gaps = 17/153 (11%)
Query: 41 RLCSASNSRLLVRLFLRGNGEKVQPQVLAFP------GKSSPPPSAGPTPPPSSRPPPSP 94
RL SAS RL L G + P + FP + SP P P SR
Sbjct: 284 RLGSASPPRLAAPLA----GSRA-PSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVV 338
Query: 95 PRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARP 154
RRR +E V G +P GPA P RR+ + G PG P
Sbjct: 339 GARRRRGG--EERRVRGRRQGCALGSPPIPA-GPAAPGRAGERRAARQWRKRGGGPGVSP 395
Query: 155 GRGAEGRPARRRPAP---APPLLPLPSRALWLG 184
GA+G R P PS A W G
Sbjct: 396 REGAQGEGVRGGVTPRARGSSTCLRPSPATWQG 428
Score = 29.6 bits (65), Expect = 4.4
Identities = 37/134 (27%), Positives = 50/134 (37%), Gaps = 16/134 (11%)
Query: 57 RGNGE--KVQPQVLAFPGKSS----PPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVA 110
RG+G + QP+ A+ +SS P S S P P R RPA E A
Sbjct: 183 RGSGRVPRGQPEQQAWEQRSSHFLAPEGSVA-----SLLPSAKPARAPRPAPRAREEAAA 237
Query: 111 AALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESV--GVPGARPGRGAEGRPARRRP- 167
+ G P++ G P + L S S+ P +P G+ P P
Sbjct: 238 GSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPL 297
Query: 168 --APAPPLLPLPSR 179
+ AP L P P R
Sbjct: 298 AGSRAPSLSPFPRR 311
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 45.4 bits (106), Expect = 8e-05
Identities = 47/143 (32%), Positives = 58/143 (40%), Gaps = 17/143 (11%)
Query: 58 GNGEKVQPQVLAFPGK-SSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
GN Q +F G+ S PP T P+ +P P+ P R PA+ E A
Sbjct: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRA---- 233
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
S G GPA+P+ L P P R GR A G A RRP P P
Sbjct: 234 -----ESRGSGPAQPAHLPLPGPAHSPAPP--APELREGR-APGSTAGRRPRPREPQAAE 285
Query: 177 PSRALWLGEWRRG---RLGTSRP 196
S +G RRG R G+S+P
Sbjct: 286 ESGCATVG-LRRGDCDRAGSSQP 307
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 45.4 bits (106), Expect = 8e-05
Identities = 47/143 (32%), Positives = 58/143 (40%), Gaps = 17/143 (11%)
Query: 58 GNGEKVQPQVLAFPGK-SSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
GN Q +F G+ S PP T P+ +P P+ P R PA+ E A
Sbjct: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRA---- 233
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
S G GPA+P+ L P P R GR A G A RRP P P
Sbjct: 234 -----ESRGSGPAQPAHLPLPGPAHSPAPP--APELREGR-APGSTAGRRPRPREPQAAE 285
Query: 177 PSRALWLGEWRRG---RLGTSRP 196
S +G RRG R G+S+P
Sbjct: 286 ESGCATVG-LRRGDCDRAGSSQP 307
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 45.4 bits (106), Expect = 8e-05
Identities = 47/143 (32%), Positives = 58/143 (40%), Gaps = 17/143 (11%)
Query: 58 GNGEKVQPQVLAFPGK-SSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
GN Q +F G+ S PP T P+ +P P+ P R PA+ E A
Sbjct: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRA---- 233
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
S G GPA+P+ L P P R GR A G A RRP P P
Sbjct: 234 -----ESRGSGPAQPAHLPLPGPAHSPAPP--APELREGR-APGSTAGRRPRPREPQAAE 285
Query: 177 PSRALWLGEWRRG---RLGTSRP 196
S +G RRG R G+S+P
Sbjct: 286 ESGCATVG-LRRGDCDRAGSSQP 307
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 45.4 bits (106), Expect = 8e-05
Identities = 39/117 (33%), Positives = 45/117 (38%), Gaps = 29/117 (24%)
Query: 65 PQVLAFPGKSSPPPSAGPTPPPSSRPP-PSPPRRRRPAWLQDEAEVAAALAGYGFINPSS 123
P L P S PPP P PPP S PP PSPP P Q+E E +
Sbjct: 414 PPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPP----PPPAQEEQEESPP----------- 458
Query: 124 TGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
P P+T + +R G P P + AE AR P P P PS A
Sbjct: 459 ----PVVPATCSRKR---------GRPPLTPSQRAEREAARAGPEGTSPPTPTPSTA 502
Score = 38.9 bits (89), Expect = 0.007
Identities = 54/195 (27%), Positives = 69/195 (35%), Gaps = 38/195 (19%)
Query: 71 PGKSSPPP------SAGPTPPP------------SSRPPPSPPRRRRPAWLQD--EAEVA 110
P PPP S+GP PP S R PP+PP + P +D +E
Sbjct: 2251 PAPPPPPPPLTLVLSSGPASPPRQAIRVKRVSTFSGRSPPAPPPYKAPRLDEDGEASEDT 2310
Query: 111 AALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGAR--PGRGAEGRPARRRPA 168
+ G G S G R T T+R G + G P PG E P P
Sbjct: 2311 PQVPGLG-----SGGFSRVRMKTPTVR--GVLDLDRPGEPAGEESPGPLQERSPLLPLPE 2363
Query: 169 PAPPLLP-LPSRALWLGEWRR--GRLGTSR-----PEFKCYQR-QLICSGLRFRVLCGIG 219
PP +P P L +W G +S P+ K Q + LRF + G
Sbjct: 2364 DGPPQVPDGPPDLLLESQWHHYSGEASSSEEEPPSPDDKENQAPKRTGPHLRFEISSEDG 2423
Query: 220 RSVDGEGAAALWHGL 234
SV+ E W L
Sbjct: 2424 FSVEAESLEGAWRTL 2438
Score = 34.7 bits (78), Expect = 0.14
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 76 PPPSAGPTPPPSSRPPPSP-PRRRRPAWLQ 104
PPP P PPP+ PPP+P RRP L+
Sbjct: 619 PPPPPAPPPPPAPSPPPAPATSSRRPLLLR 648
Score = 28.9 bits (63), Expect = 7.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Query: 56 LRGNGEKVQPQVLAFPGKSSP-PPSAGPTPPPSSRPPPSP 94
+ G GE V P P K P PP+ PT P S PP P
Sbjct: 2204 MAGEGEPVPP-----PVKQPPLPPTISPTAPTSWTLPPGP 2238
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 43.9 bits (102), Expect = 2e-04
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 62 KVQPQVLAFPGKSSPPPSAGPTP-PPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
+V P+ G+ P GP P PP+ PPP R RR A LQ + + A++ G
Sbjct: 271 EVSPEERPSSGQQDVAPDRGPEPGPPAPLPPPGGARARR-ARLQHSSALTASVEEGGV-- 327
Query: 121 PSSTGEGP-ARPSTQTLRRSGAFP---CESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
GE P +RP+T L + P E P P G +G PA P P
Sbjct: 328 ---PGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 384
Query: 177 PSRA 180
+A
Sbjct: 385 TDKA 388
>gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo
sapiens]
Length = 351
Score = 43.5 bits (101), Expect = 3e-04
Identities = 45/129 (34%), Positives = 58/129 (44%), Gaps = 18/129 (13%)
Query: 73 KSSPPPSAGPTPPPSSRPPPSPPR---RRRPA--WLQDEAEVAAALAGYGFINPSSTGEG 127
+++P P+A P+P P RPPP+ P P L D V A G+G ++ + E
Sbjct: 164 RAAPAPAARPSPDPGRRPPPAAPAPVVHVGPVLPLLHDPVGVPLAPLGHGGVDWAENKER 223
Query: 128 PARPSTQTLR-RSGAFPCESVGVPGARPGRGAEGRPARRRPAPAP-PLLPLPSRALWLGE 185
P R LR RS F S PGA + E RRP P P P LP +R G
Sbjct: 224 PRR-----LRLRSQRFRPPS---PGAARSQLPE---TARRPRPRPRPALPRRAREPQPGS 272
Query: 186 WRRGRLGTS 194
RR R T+
Sbjct: 273 GRRCRRDTA 281
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 43.5 bits (101), Expect = 3e-04
Identities = 34/102 (33%), Positives = 42/102 (41%), Gaps = 18/102 (17%)
Query: 74 SSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINP---SSTGEGPAR 130
S+PPP A P PP S PPP PP AL+GY N S+G+G +R
Sbjct: 148 SAPPPPAPPLPPTPSPPPPPPP------------PPPPALSGYTTTNSGGGGSSGKGHSR 195
Query: 131 PSTQTLRRSGAFPCESV-GVPGARPGRGAEGRPARRRPAPAP 171
S P ++ G P R G P + PAP P
Sbjct: 196 DFVLRRDLSATAPAAAMHGAPLGGEQRSGTGSP--QHPAPPP 235
Score = 32.0 bits (71), Expect = 0.89
Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 28/86 (32%)
Query: 93 SPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGA 152
SPP + PA EA AAA A +P + G++PC
Sbjct: 105 SPPSQAFPA--HPEAPAAAARAAALVAHPGA----------------GSYPC-------- 138
Query: 153 RPGRGAEGRPARRRPAPAPPLLPLPS 178
G G+ G P PAPPL P PS
Sbjct: 139 --GGGSSGAQPSAPPPPAPPLPPTPS 162
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 43.1 bits (100), Expect = 4e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 43.1 bits (100), Expect = 4e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 43.1 bits (100), Expect = 4e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 43.1 bits (100), Expect = 4e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 43.1 bits (100), Expect = 4e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.1 bits (100), Expect = 4e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.1 bits (100), Expect = 4e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 42.7 bits (99), Expect = 5e-04
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 65 PQVLAFPGKSSPPPSAGPTPPPSSRPPPS--PPRRRRPAWLQDEAEVAAALAGY--GFIN 120
P A PGK+S + GPT PPS P P+ PP++ PA + +A G
Sbjct: 450 PAQQAGPGKTSAQQT-GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTK 508
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
P GPA+PS Q + G S P +PG +P+ ++P+PA P
Sbjct: 509 PPPQQPGPAKPSPQ---QPG-----STKPPSQQPG---SAKPSAQQPSPAKP 549
Score = 37.4 bits (85), Expect = 0.021
Identities = 47/187 (25%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
+P++ L S T S FG + P ++ P S S+ R F R +
Sbjct: 2350 LPMKEQL--STTYFTSGETFGQEKPASQL---------PSGSPSVSSLPAKPRPFFRSSS 2398
Query: 61 EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
+ Q P PPP P PPP PPP+ P +P L + A +
Sbjct: 2399 LDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSP---KPTILPKKKLTVA--------S 2447
Query: 121 PSSTG----EGPARPSTQTLRRSGAFP----CESVGVP-GARPGRGAEGRPARRRPAPA- 170
P +T + T + RS P C + P +P G RP P+
Sbjct: 2448 PVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSK 2507
Query: 171 PPLLPLP 177
PP+ P P
Sbjct: 2508 PPIAPKP 2514
Score = 36.2 bits (82), Expect = 0.047
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 11/104 (10%)
Query: 71 PGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPAR 130
PG SP + GPT P +P P + PA + +A G P S GPA+
Sbjct: 425 PGLQSPAKAPGPTKTPVQQPGPG----KIPAQQAGPGKTSAQQTGP--TKPPSQLPGPAK 478
Query: 131 PSTQTLRRSGAFPCE--SVGVPGARPGRGAEGRPARRRPAPAPP 172
P Q + P + S P +PG +P ++P PA P
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKPPSQQPG---STKPPPQQPGPAKP 519
Score = 35.4 bits (80), Expect = 0.080
Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 19/126 (15%)
Query: 60 GEKVQPQVLAFPGKSSPPPSAGPTP--PPSSRP-----------PPSPPRRRRPAWLQDE 106
GE V+P L P K PP PTP PP+ +P PP+ P Q
Sbjct: 291 GESVKPS-LPSPSK---PPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQP 346
Query: 107 AEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRR 166
V + G P + GPA+P Q + P P A G+ ++
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLGPAKPPAQ--QTGSEKPSSEQPGPKALAQPPGVGKTPAQQ 404
Query: 167 PAPAPP 172
P PA P
Sbjct: 405 PGPAKP 410
Score = 30.0 bits (66), Expect = 3.4
Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 21/117 (17%)
Query: 73 KSSPPPSAGPTPPPSSRPP----------PSPPRRRRPAWLQDEAEVAAALAGYGFINPS 122
K SP P A P P S PP P+P + +P Q+++ + G P
Sbjct: 861 KMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKP---QEQSRRFSLNLGSITDAPK 917
Query: 123 STGEGPARPSTQTLRRSGAF-------PCESVGVPGARPGRGAEGRPARRRPAPAPP 172
S P T L GA + G PG G G P ++ PAP+ P
Sbjct: 918 SQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSG-PGAPMKQAPAPSQP 973
Score = 29.6 bits (65), Expect = 4.4
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 71 PGKSSPPPSA-GPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEG-P 128
PG + P P G T PPS +P + P ++P+ + A+ + S TG G P
Sbjct: 514 PGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPV-------SQTGSGKP 566
Query: 129 ARPST 133
+P T
Sbjct: 567 LQPPT 571
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 42.7 bits (99), Expect = 5e-04
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 65 PQVLAFPGKSSPPPSAGPTPPPSSRPPPS--PPRRRRPAWLQDEAEVAAALAGY--GFIN 120
P A PGK+S + GPT PPS P P+ PP++ PA + +A G
Sbjct: 450 PAQQAGPGKTSAQQT-GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTK 508
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
P GPA+PS Q + G S P +PG +P+ ++P+PA P
Sbjct: 509 PPPQQPGPAKPSPQ---QPG-----STKPPSQQPG---SAKPSAQQPSPAKP 549
Score = 37.4 bits (85), Expect = 0.021
Identities = 47/187 (25%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
+P++ L S T S FG + P ++ P S S+ R F R +
Sbjct: 2350 LPMKEQL--STTYFTSGETFGQEKPASQL---------PSGSPSVSSLPAKPRPFFRSSS 2398
Query: 61 EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
+ Q P PPP P PPP PPP+ P +P L + A +
Sbjct: 2399 LDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSP---KPTILPKKKLTVA--------S 2447
Query: 121 PSSTG----EGPARPSTQTLRRSGAFP----CESVGVP-GARPGRGAEGRPARRRPAPA- 170
P +T + T + RS P C + P +P G RP P+
Sbjct: 2448 PVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSK 2507
Query: 171 PPLLPLP 177
PP+ P P
Sbjct: 2508 PPIAPKP 2514
Score = 36.2 bits (82), Expect = 0.047
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 11/104 (10%)
Query: 71 PGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPAR 130
PG SP + GPT P +P P + PA + +A G P S GPA+
Sbjct: 425 PGLQSPAKAPGPTKTPVQQPGPG----KIPAQQAGPGKTSAQQTGP--TKPPSQLPGPAK 478
Query: 131 PSTQTLRRSGAFPCE--SVGVPGARPGRGAEGRPARRRPAPAPP 172
P Q + P + S P +PG +P ++P PA P
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKPPSQQPG---STKPPPQQPGPAKP 519
Score = 35.4 bits (80), Expect = 0.080
Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 19/126 (15%)
Query: 60 GEKVQPQVLAFPGKSSPPPSAGPTP--PPSSRP-----------PPSPPRRRRPAWLQDE 106
GE V+P L P K PP PTP PP+ +P PP+ P Q
Sbjct: 291 GESVKPS-LPSPSK---PPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQP 346
Query: 107 AEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRR 166
V + G P + GPA+P Q + P P A G+ ++
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLGPAKPPAQ--QTGSEKPSSEQPGPKALAQPPGVGKTPAQQ 404
Query: 167 PAPAPP 172
P PA P
Sbjct: 405 PGPAKP 410
Score = 30.0 bits (66), Expect = 3.4
Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 21/117 (17%)
Query: 73 KSSPPPSAGPTPPPSSRPP----------PSPPRRRRPAWLQDEAEVAAALAGYGFINPS 122
K SP P A P P S PP P+P + +P Q+++ + G P
Sbjct: 861 KMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKP---QEQSRRFSLNLGSITDAPK 917
Query: 123 STGEGPARPSTQTLRRSGAF-------PCESVGVPGARPGRGAEGRPARRRPAPAPP 172
S P T L GA + G PG G G P ++ PAP+ P
Sbjct: 918 SQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSG-PGAPMKQAPAPSQP 973
Score = 29.6 bits (65), Expect = 4.4
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 71 PGKSSPPPSA-GPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEG-P 128
PG + P P G T PPS +P + P ++P+ + A+ + S TG G P
Sbjct: 514 PGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPV-------SQTGSGKP 566
Query: 129 ARPST 133
+P T
Sbjct: 567 LQPPT 571
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo
sapiens]
Length = 2161
Score = 42.7 bits (99), Expect = 5e-04
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 13/170 (7%)
Query: 7 LFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNGEKVQP- 65
L+N T A+ L G+ V G+ PF++ + + L L + V P
Sbjct: 356 LYNKETCARILLYRGADKDVKNNNGQT-----PFQVAVIAGNFELGELIRNHREQDVVPF 410
Query: 66 -QVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSST 124
+ + + PP G T PP+ S P W+ A AA+ G P+S
Sbjct: 411 QESPKYAARRRGPPGTGLTVPPALLRANSDTSMALPDWMVFSAPGAASSGAPG---PTSG 467
Query: 125 GEGPARPSTQTLRRSGAFPCESVGVPGAR---PGRGAEGRPARRRPAPAP 171
+G ++PS T + S + GAR P RG A+R+P P
Sbjct: 468 SQGQSQPSAPTTKLSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRP 517
Score = 34.3 bits (77), Expect = 0.18
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 72 GKSSPPPSAGPTP-PPSSRPPPSPPRRRRPAWLQDEAEVAAALAG 115
G SSP P+ +P PPS P P+P PA L ++ AAL G
Sbjct: 1194 GGSSPSPAPAMSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVG 1238
Score = 32.0 bits (71), Expect = 0.89
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 19/101 (18%)
Query: 77 PPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPARPSTQTL 136
PP+ PT P S +PPP+ VAA P+ + P+ S+
Sbjct: 1127 PPAPSPTSPASPQPPPA---------------VAAPSEKNSIPIPTIIIKAPSTSSSGRS 1171
Query: 137 RRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLP 177
+ + E P G G G P+PAP + P+P
Sbjct: 1172 SQGSSTEAEPPTQPEPTGGGGGGG----SSPSPAPAMSPVP 1208
Score = 30.4 bits (67), Expect = 2.6
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 31/95 (32%)
Query: 68 LAFPGKSS--PPPSAGPTPPPSSRPP-PSPPRRRRPAWLQDEAEVAAALAGYGFINPSST 124
L+ PG PPP+ P PP S PP PS R P+ G NP S
Sbjct: 912 LSVPGSEDIPPPPTTSPPEPPYSTPPVPSSSGRLTPS------------PRGGPFNPGSG 959
Query: 125 G----------EGPARPST------QTLRRSGAFP 143
G +GP+ P T ++L SG P
Sbjct: 960 GPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLP 994
>gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5
preproprotein [Homo sapiens]
Length = 862
Score = 42.4 bits (98), Expect = 7e-04
Identities = 37/134 (27%), Positives = 47/134 (35%), Gaps = 4/134 (2%)
Query: 41 RLCSASNSRLLVRLFLRGNGEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRP 100
RLC R G E+ P A + + + PPS PP P +R
Sbjct: 724 RLCQLKGPTCQYRAAQSGPSERPGPPQRALLARGTKASALSFPAPPSRPLPPDPVSKRLQ 783
Query: 101 AWLQDEAEVAAALAGYGFINPSSTGEGPAR--PSTQTLRRSGAFPCESVGVPGARPGRGA 158
A L D + S +GPA+ P + L C S +PG PG G
Sbjct: 784 AELADRPNPPTRPLPADPVVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPG--PGAGI 841
Query: 159 EGRPARRRPAPAPP 172
RPAP PP
Sbjct: 842 PPLVVPSRPAPPPP 855
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 42.4 bits (98), Expect = 7e-04
Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Query: 59 NGEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGF 118
+G QPQ G + PPP A PP ++ PP P RP ++ + L
Sbjct: 599 SGATGQPQP---QGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLN--- 652
Query: 119 INPSSTGEGPARPSTQTLRRSGA-----FPCESVGVPGARPGRGAEGRPARRRPAPAPPL 173
P TG P + S L+ GA P + +G P P PA+ PA PP
Sbjct: 653 PPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPL-LHPPPAQSWPAQLPPR 711
Query: 174 LPLPSRALWLG 184
PLP + L G
Sbjct: 712 APLPGQMLLSG 722
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,316,376
Number of Sequences: 37866
Number of extensions: 1246548
Number of successful extensions: 25820
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 1017
Number of HSP's that attempted gapping in prelim test: 13060
Number of HSP's gapped (non-prelim): 9021
length of query: 363
length of database: 18,247,518
effective HSP length: 104
effective length of query: 259
effective length of database: 14,309,454
effective search space: 3706148586
effective search space used: 3706148586
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.