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Search of human proteins with 239749864
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749864 PREDICTED: hypothetical protein [Homo sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169201730 PREDICTED: hypothetical protein [Homo sapiens] 426 e-120
gi|239749864 PREDICTED: hypothetical protein [Homo sapiens] 426 e-120
gi|239744166 PREDICTED: hypothetical protein [Homo sapiens] 426 e-120
gi|41406094 J domain containing protein 1 isoform b [Homo sapiens] 48 5e-06
gi|11141871 J domain containing protein 1 isoform a [Homo sapiens] 48 5e-06
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 37 0.009
gi|158341646 hypothetical protein LOC729830 [Homo sapiens] 35 0.059
gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens] 34 0.077
gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo sa... 34 0.10
gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo sap... 34 0.10
gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo ... 34 0.10
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 34 0.10
gi|119943102 CREB binding protein isoform b [Homo sapiens] 33 0.17
gi|119943104 CREB binding protein isoform a [Homo sapiens] 33 0.17
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 33 0.17
gi|223468617 family with sequence similarity 75, member C1 [Homo... 33 0.22
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 33 0.22
gi|169214031 PREDICTED: hypothetical LOC646508 [Homo sapiens] 32 0.29
gi|239751865 PREDICTED: hypothetical LOC646508 [Homo sapiens] 32 0.29
gi|169213419 PREDICTED: hypothetical LOC646508 [Homo sapiens] 32 0.29
gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo sap... 32 0.38
gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo sa... 32 0.38
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 32 0.38
gi|32307177 forkhead box G1 [Homo sapiens] 32 0.38
gi|98991767 mitogen-activated protein kinase kinase kinase 7 int... 32 0.38
gi|50345997 E1A binding protein p300 [Homo sapiens] 32 0.50
gi|7661892 REST corepressor 1 [Homo sapiens] 32 0.50
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma... 32 0.50
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma... 32 0.50
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma... 32 0.50
>gi|169201730 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 426 bits (1096), Expect = e-120
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI 60
MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI
Sbjct: 1 MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI 60
Query: 61 REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG 120
REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG
Sbjct: 61 REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG 120
Query: 121 GNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDCHQLSH 180
GNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDCHQLSH
Sbjct: 121 GNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDCHQLSH 180
Query: 181 TQRFAQTHAPANYSSADFLESAACEETL 208
TQRFAQTHAPANYSSADFLESAACEETL
Sbjct: 181 TQRFAQTHAPANYSSADFLESAACEETL 208
>gi|239749864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 426 bits (1096), Expect = e-120
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI 60
MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI
Sbjct: 1 MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI 60
Query: 61 REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG 120
REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG
Sbjct: 61 REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG 120
Query: 121 GNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDCHQLSH 180
GNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDCHQLSH
Sbjct: 121 GNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDCHQLSH 180
Query: 181 TQRFAQTHAPANYSSADFLESAACEETL 208
TQRFAQTHAPANYSSADFLESAACEETL
Sbjct: 181 TQRFAQTHAPANYSSADFLESAACEETL 208
>gi|239744166 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 426 bits (1096), Expect = e-120
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI 60
MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI
Sbjct: 1 MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI 60
Query: 61 REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG 120
REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG
Sbjct: 61 REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG 120
Query: 121 GNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDCHQLSH 180
GNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDCHQLSH
Sbjct: 121 GNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDCHQLSH 180
Query: 181 TQRFAQTHAPANYSSADFLESAACEETL 208
TQRFAQTHAPANYSSADFLESAACEETL
Sbjct: 181 TQRFAQTHAPANYSSADFLESAACEETL 208
>gi|41406094 J domain containing protein 1 isoform b [Homo
sapiens]
Length = 107
Score = 48.1 bits (113), Expect = 5e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Query: 3 PQQASENSKAMETVQKPQKAKEILTNEESCAHYHH 37
P + EN KA+ET QK QKAKEILTNEES A Y H
Sbjct: 43 PDKHPENPKAVETFQKLQKAKEILTNEESRARYDH 77
>gi|11141871 J domain containing protein 1 isoform a [Homo
sapiens]
Length = 198
Score = 48.1 bits (113), Expect = 5e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Query: 3 PQQASENSKAMETVQKPQKAKEILTNEESCAHYHH 37
P + EN KA+ET QK QKAKEILTNEES A Y H
Sbjct: 43 PDKHPENPKAVETFQKLQKAKEILTNEESRARYDH 77
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 37.4 bits (85), Expect = 0.009
Identities = 40/156 (25%), Positives = 55/156 (35%), Gaps = 21/156 (13%)
Query: 45 HSHPKHLTLTLAPTPIREPGLL--PNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSA-- 100
HS P+ TL+P G+ HS P S AFP P LSR + ++
Sbjct: 891 HSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDSTT--TPGLSRHSTTSHS 948
Query: 101 ---------VPEIDKEVAEGVPLLSAPRGGNHSAAAAATATATLAASEESCSAVSALRCS 151
+P G P S G+ A +T T SE+S + S+ R
Sbjct: 949 SPGSTDTTLLPASTTTXLVGEPTTSPISSGSTETTALPGSTTTAGLSEKSTTFYSSPRSP 1008
Query: 152 QTTFVGAGPGKEHSPGPADRGRDCHQ---LSHTQRF 184
TT P S G ++ H +HT F
Sbjct: 1009 DTTL---SPASTTSSGVSEESTTSHSRPGSTHTTAF 1041
Score = 30.8 bits (68), Expect = 0.85
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 45 HSHPKHLTLTLAPTPIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEI 104
HS H T++ AP+ P YHS+P S FP + S ++ ++
Sbjct: 782 HSSTTH-TISSAPSTTSALVEEPTSYHSSPGSTATTHFPD-----SSTTSGRSEESIASH 835
Query: 105 DKEVAEGVPLLSAPRGGNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEH 164
+ A G +L A +T ++ E + S +S+ T A PG
Sbjct: 836 SSQDATGTIVL------------PARSTNSVLLGESTTSPISSGSMETT----ALPGSTT 879
Query: 165 SPGPADRGRDCHQLSHTQRFAQTHAPANYSSADFLESA 202
+PG ++R H S + A T +PA+ +S+ E +
Sbjct: 880 TPGLSERSTTFH--SSPRSPATTLSPASTTSSGVSEES 915
>gi|158341646 hypothetical protein LOC729830 [Homo sapiens]
Length = 1040
Score = 34.7 bits (78), Expect = 0.059
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 2 PPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPIR 61
PP +A +++ P + + T+ E +RD+ P HS PK P R
Sbjct: 666 PPAEAQAEVQSVPINNGPLLSTQPETDSEE---EWNRDNSDPFHSEPKE------PKQER 716
Query: 62 EPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAE 110
EP + P S + LA P+P H +L+ +A PE ++ +A+
Sbjct: 717 EP-------EAAPESNSELASPAPEAEHSSNLT----AAHPESEELIAQ 754
>gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]
Length = 391
Score = 34.3 bits (77), Expect = 0.077
Identities = 37/141 (26%), Positives = 54/141 (38%), Gaps = 26/141 (18%)
Query: 33 AHYHHRDSPYPLHSHPKHLTLTLAPTPIREPGLLPNLYHSTPRSKTPL-AFPSPRLPHQP 91
AH H +P H HP H H+ P + P+ + L + P
Sbjct: 222 AHPH----AHPAHPHPHHP-------------------HAHPHNPQPMHRYDMGALQYSP 258
Query: 92 -SLSRQAVSAVPEIDKEVAEGVPLLSAPR-GGNHSAAAAATATATLAASEESCSAVSALR 149
S S+ +SA P + G +A GG H +A A A A AAS + A+ +L
Sbjct: 259 ISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAAAAAAAASSGALGALGSLV 318
Query: 150 CSQTTFVGAGPGKEHSPGPAD 170
S+ + P +P P D
Sbjct: 319 KSEPSGSPPAPAHSRAPCPGD 339
>gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo
sapiens]
Length = 1137
Score = 33.9 bits (76), Expect = 0.10
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 36 HHRDSPYPLHSHPKHLTLTLAPT---PIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQPS 92
H + P+H + +++ T P R PG P+L+HST + + RL H S
Sbjct: 216 HRHQTKKPIHRSLADIGKSVSTTNRSPARSPGAGPSLHHSTEDLRMRQSANYGRLCHAQS 275
Query: 93 LSRQAVSAVPEIDK 106
S +S P D+
Sbjct: 276 RSMNDISLTPNTDQ 289
>gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo
sapiens]
Length = 1121
Score = 33.9 bits (76), Expect = 0.10
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 36 HHRDSPYPLHSHPKHLTLTLAPT---PIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQPS 92
H + P+H + +++ T P R PG P+L+HST + + RL H S
Sbjct: 216 HRHQTKKPIHRSLADIGKSVSTTNRSPARSPGAGPSLHHSTEDLRMRQSANYGRLCHAQS 275
Query: 93 LSRQAVSAVPEIDK 106
S +S P D+
Sbjct: 276 RSMNDISLTPNTDQ 289
>gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo
sapiens]
Length = 1386
Score = 33.9 bits (76), Expect = 0.10
Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 20/141 (14%)
Query: 3 PQQASENSKAMETVQKPQKAKEILTNEESCAHY----HHRDSPYPLHSHPKHLTLTLAPT 58
P++ E S E P + LT S R++P P S+ + T TL P+
Sbjct: 1100 PEEELEGSSEPEEWCPPMPERSHLTEPSSSGGCLVTPSRRETPSPTPSYGQQSTATLTPS 1159
Query: 59 ---PIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLL 115
P + P +P+L H PR + PL SP QP L + A L
Sbjct: 1160 PPDPPQPPTDMPHL-HQMPR-RVPLGPSSPLSVSQPMLGIRE-----------ARPAGLG 1206
Query: 116 SAPRGGNHSAAAAATATATLA 136
+ P H + + A +TA+ A
Sbjct: 1207 AGPAASPHLSPSPAPSTASSA 1227
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 33.9 bits (76), Expect = 0.10
Identities = 50/171 (29%), Positives = 66/171 (38%), Gaps = 31/171 (18%)
Query: 30 ESCAHYHHRDSPYP-LHSHPKHLTLTLAPTPIREPGLLPNLYHSTPRSKTPLAFPSPRLP 88
+S YH ++ P L PK + PTP EP L STP + TP + P P P
Sbjct: 261 DSILAYHQQNVPRAKLDQAPK-----VPPTP--EP-----LPLSTPSAGTPQSQPPPLPP 308
Query: 89 HQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRGGNHSAAAAATATATLAASEESCSAVSA- 147
P A A+P EG P S+ +S AA+T T + +A +A
Sbjct: 309 PPPPAPGSAPPALP------PEGPPEDSSQDLAPNSVGAASTGGGTGGTHPNTPTATTAN 362
Query: 148 --LRCSQTTFVGAGP---GKEHSPGPADR------GRDCHQLSHTQRFAQT 187
L GP G+ +PG R G QL H +R QT
Sbjct: 363 NPLPPGGDPSSAPGPALLGEAAAPGNGQRSLVGSEGLSKEQLEHRERSLQT 413
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 33.1 bits (74), Expect = 0.17
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 43 PLHSHPKHLTLTLAPTPIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVP 102
P+ P H T P P +P+L H+TP TP P P P QPS + P
Sbjct: 809 PVTQSPLHPT----PPPASTAAGMPSLQHTTPPGMTP---PQPAAPTQPSTPVSSSGQTP 861
Query: 103 EIDKEVAEGVPLLSAPRGGNHSAAAAATATATLAASEES 141
P G+ +A +T T+ A+ ++
Sbjct: 862 --------------TPTPGSVPSATQTQSTPTVQAAAQA 886
Score = 27.3 bits (59), Expect = 9.4
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 56 APTPIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQPS---LSRQAVSAVPEIDKEVAEGV 112
+P P++ P P+S+ P + PSPR+ QPS +S Q S P + +A +
Sbjct: 2307 SPAPVQSP---------RPQSQPPHSSPSPRIQPQPSPHHVSPQTGSPHPGLAVTMASSI 2357
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 33.1 bits (74), Expect = 0.17
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 21/99 (21%)
Query: 43 PLHSHPKHLTLTLAPTPIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVP 102
P+ P H T P P +P+L H+TP TP P P P QPS + P
Sbjct: 847 PVTQSPLHPT----PPPASTAAGMPSLQHTTPPGMTP---PQPAAPTQPSTPVSSSGQTP 899
Query: 103 EIDKEVAEGVPLLSAPRGGNHSAAAAATATATLAASEES 141
P G+ +A +T T+ A+ ++
Sbjct: 900 --------------TPTPGSVPSATQTQSTPTVQAAAQA 924
Score = 27.3 bits (59), Expect = 9.4
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 56 APTPIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQPS---LSRQAVSAVPEIDKEVAEGV 112
+P P++ P P+S+ P + PSPR+ QPS +S Q S P + +A +
Sbjct: 2345 SPAPVQSP---------RPQSQPPHSSPSPRIQPQPSPHHVSPQTGSPHPGLAVTMASSI 2395
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 33.1 bits (74), Expect = 0.17
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Query: 54 TLAPTPIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQ---PSLSRQAVSAVPEIDKEVAE 110
T+A IR PG L + S P P P LP PS S +S+ + E
Sbjct: 1501 TIAKLSIRPPGGLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKE 1560
Query: 111 GVPLLSAPRGGNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGK 162
P+ AP G S++ A+ T A S R S+ F+ A G+
Sbjct: 1561 EPPVPEAPSSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKHNFLQAHNGQ 1612
>gi|223468617 family with sequence similarity 75, member C1 [Homo
sapiens]
Length = 1188
Score = 32.7 bits (73), Expect = 0.22
Identities = 43/139 (30%), Positives = 52/139 (37%), Gaps = 30/139 (21%)
Query: 40 SPYPLHSHPKHLTLTLAPTPIR------------EPGLL--------PNLYHSTPRSKTP 79
SP P HP+ L T P P+ EP LL P L+ P + P
Sbjct: 166 SPDPRTKHPQDLASTPPPGPMTTSVSSLSASQPPEPSLLLERPSPEPPALFPHPPHTPDP 225
Query: 80 LA-FPSPRLPHQPSLSRQAVSAVPEIDKEVA---EGVPLLSAPRGGNHSAAAAATATATL 135
LA P P P R + P VA + VP +PR AA+ A + L
Sbjct: 226 LACSPPPPKGFTPPPLRDSTLLTPSHCDSVALPLDTVPQSLSPR---EDLAASVPAISGL 282
Query: 136 AASEESCSAVSALRCSQTT 154
S S VSAL SQ T
Sbjct: 283 GGSN---SQVSALSWSQET 298
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 32.7 bits (73), Expect = 0.22
Identities = 33/129 (25%), Positives = 46/129 (35%), Gaps = 2/129 (1%)
Query: 56 APTPIREPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLL 115
+P P +P P +TPR P P P + Q S + +E L
Sbjct: 1798 SPAPRAQPKGTPGP-RATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLS 1856
Query: 116 SAPRGGNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPGPADRGRDC 175
PR A A T +++ + + + + R T GA PG SP P R
Sbjct: 1857 QPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTL 1916
Query: 176 HQLSH-TQR 183
H TQR
Sbjct: 1917 LAKQHKTQR 1925
>gi|169214031 PREDICTED: hypothetical LOC646508 [Homo sapiens]
Length = 560
Score = 32.3 bits (72), Expect = 0.29
Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 43/206 (20%)
Query: 3 PQQASENSKAMETVQKPQKAKEILTNE--ESCAHYHHRDSPYPLHSHPKHLTL---TLAP 57
PQQ + + PQ+ + E E C H P P+H+ K L + P
Sbjct: 210 PQQQQSEAPTQTFPRTPQEKMQEAWKEPAEDCLFLRHPTMPLPVHTTKKRSVLGPVSTGP 269
Query: 58 TPIREPG---LLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPL 114
P+ +P L P+ ++ +P+ L+ P H ++ A +P+
Sbjct: 270 PPVNKPEMRLLCPSGHNDSPQ----LSTCGPTKGHGRDVT--------------ASLLPV 311
Query: 115 LSAPRGGNHSAAAAATATATLAASEESCSAVSALR-CSQTTFVGAG---------PGKEH 164
L S+ T +A L A+ S+ AL+ Q +G G P +
Sbjct: 312 LK-------SSHQTPTLSARLPANRPDMSSHGALQPAMQALALGPGLKSQAEIKHPDADA 364
Query: 165 SPGPADRGRDCHQLSHTQRFAQTHAP 190
P P + C Q S TQ + AP
Sbjct: 365 KPRPQQVRKQCGQDSRTQAPDKEPAP 390
>gi|239751865 PREDICTED: hypothetical LOC646508 [Homo sapiens]
Length = 528
Score = 32.3 bits (72), Expect = 0.29
Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 43/206 (20%)
Query: 3 PQQASENSKAMETVQKPQKAKEILTNE--ESCAHYHHRDSPYPLHSHPKHLTL---TLAP 57
PQQ + + PQ+ + E E C H P P+H+ K L + P
Sbjct: 178 PQQQQSEAPTQTFPRTPQEKMQEAWKEPAEDCLFLRHPTMPLPVHTTKKRSVLGPVSTGP 237
Query: 58 TPIREPG---LLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPL 114
P+ +P L P+ ++ +P+ L+ P H ++ A +P+
Sbjct: 238 PPVNKPEMRLLCPSGHNDSPQ----LSTCGPTKGHGGDVT--------------ASLLPV 279
Query: 115 LSAPRGGNHSAAAAATATATLAASEESCSAVSALR-CSQTTFVGAG---------PGKEH 164
L S+ T +A L A+ S+ AL+ Q +G G P +
Sbjct: 280 LK-------SSHQTPTLSARLPANRPDMSSHGALQPAMQALALGPGLKSQAEIKHPDADA 332
Query: 165 SPGPADRGRDCHQLSHTQRFAQTHAP 190
P P + C Q S TQ + AP
Sbjct: 333 KPRPQQVRKQCGQDSRTQAPDKEPAP 358
>gi|169213419 PREDICTED: hypothetical LOC646508 [Homo sapiens]
Length = 560
Score = 32.3 bits (72), Expect = 0.29
Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 43/206 (20%)
Query: 3 PQQASENSKAMETVQKPQKAKEILTNE--ESCAHYHHRDSPYPLHSHPKHLTL---TLAP 57
PQQ + + PQ+ + E E C H P P+H+ K L + P
Sbjct: 210 PQQQQSEAPTQTFPRTPQEKMQEAWKEPAEDCLFLRHPTMPLPVHTTKKRSVLGPVSTGP 269
Query: 58 TPIREPG---LLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPL 114
P+ +P L P+ ++ +P+ L+ P H ++ A +P+
Sbjct: 270 PPVNKPEMRLLCPSGHNDSPQ----LSTCGPTKGHGRDVT--------------ASLLPV 311
Query: 115 LSAPRGGNHSAAAAATATATLAASEESCSAVSALR-CSQTTFVGAG---------PGKEH 164
L S+ T +A L A+ S+ AL+ Q +G G P +
Sbjct: 312 LK-------SSHQTPTLSARLPANRPDMSSHGALQPAMQALALGPGLKSQAEIKHPDADA 364
Query: 165 SPGPADRGRDCHQLSHTQRFAQTHAP 190
P P + C Q S TQ + AP
Sbjct: 365 KPRPQQVRKQCGQDSRTQAPDKEPAP 390
>gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo
sapiens]
Length = 1048
Score = 32.0 bits (71), Expect = 0.38
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 19/127 (14%)
Query: 24 EILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPIREPGLLP------NLYHSTPRSK 77
+++T + S A + P P+ T + P PI PG+ P ++ +TP +
Sbjct: 546 QLMTVDASHARHIQGIQPAPIS------TQGIQPAPIGTPGIQPAPLGTQGIHSATPINT 599
Query: 78 TPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRGGNHSAAAAATATATLAA 137
L P+P QP + + V +A+G +++ P SAA AAT +
Sbjct: 600 QGLQ-PAPMGTQQPQPEGKTSAVV------LADGATIVANPISNPFSAAPAATTVVQTHS 652
Query: 138 SEESCSA 144
S +A
Sbjct: 653 QSASTNA 659
>gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo
sapiens]
Length = 1083
Score = 32.0 bits (71), Expect = 0.38
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 19/127 (14%)
Query: 24 EILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPIREPGLLP------NLYHSTPRSK 77
+++T + S A + P P+ T + P PI PG+ P ++ +TP +
Sbjct: 546 QLMTVDASHARHIQGIQPAPIS------TQGIQPAPIGTPGIQPAPLGTQGIHSATPINT 599
Query: 78 TPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRGGNHSAAAAATATATLAA 137
L P+P QP + + V +A+G +++ P SAA AAT +
Sbjct: 600 QGLQ-PAPMGTQQPQPEGKTSAVV------LADGATIVANPISNPFSAAPAATTVVQTHS 652
Query: 138 SEESCSA 144
S +A
Sbjct: 653 QSASTNA 659
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 32.0 bits (71), Expect = 0.38
Identities = 41/168 (24%), Positives = 60/168 (35%), Gaps = 45/168 (26%)
Query: 34 HYHHRDS--PYPLHSHPKHLTLTLAPTPIREPGLLPNLYHSTPRSKTPLAFPSPR----- 86
H+HH+ P P S P P P PGL P ++P + F SPR
Sbjct: 11 HHHHQQQLQPAPGASAPPP-----PPPPPLSPGLAPGTTPASPTASGLAPFASPRHGLAL 65
Query: 87 -----------LPHQPS--------------LSRQAVSAVPEIDKEVAEGVPLLSAPRGG 121
P P + A VP + A GV A G
Sbjct: 66 PEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPVVPAVSTSSAAGVAPNPAGSGS 125
Query: 122 NHSAAAAATATATLAASEES-----CSAVSALRCSQTTFVG---AGPG 161
N+S +++++ T++ ++S S + A S T +G AGPG
Sbjct: 126 NNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTAPLGPGAAGPG 173
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 32.0 bits (71), Expect = 0.38
Identities = 45/176 (25%), Positives = 56/176 (31%), Gaps = 25/176 (14%)
Query: 1 MPPQQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPI 60
+P S NS E VQ N+ A + H +S +P H H H P P
Sbjct: 13 IPKSSFSINSLVPEAVQ----------NDNHHASHGHHNSHHPQHHHHHHHHHHHPPPPA 62
Query: 61 REPGLLPNLYHSTPRSKTPLAFPSPRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRG 120
+P P P P P P QP +R A P D + LL P
Sbjct: 63 PQPPPPPQQQQPPP--------PPPPAP-QPPQTRGA----PAADDDKGPQQLLLPPPPP 109
Query: 121 GNHSAAAAATATATLAASEESCSAVSALR--CSQTTFVGAGPGKEHSPGPADRGRD 174
+AA L E L GAG G E G + G+D
Sbjct: 110 PPPAAALDGAKADGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAGEGGKD 165
>gi|98991767 mitogen-activated protein kinase kinase kinase 7
interacting protein 3 [Homo sapiens]
Length = 712
Score = 32.0 bits (71), Expect = 0.38
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 4 QQASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPIREP 63
+Q S++S +T PQ + + HY R P P++ H ++ + ++
Sbjct: 233 RQTSQSSSGRQT---PQSTPWQSSPQGPVPHYSQR--PLPVYPHQQNYQPSQYSP--KQQ 285
Query: 64 GLLPNLYHSTPRSKTPLAFPSPRLPHQPS 92
+ + YHS P S+ P F SP+ QPS
Sbjct: 286 QIPQSAYHSPPPSQCPSPFSSPQHQVQPS 314
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 31.6 bits (70), Expect = 0.50
Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 37 HRDSPYPLHSH---PKHLT---------LTLAPTPIREPGLLPNLYHSTPRSKTPLAFPS 84
H++SP P+ S P H T P P+ P +P S P P+
Sbjct: 828 HQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMPPGPQSQALHPPPRQTPT 887
Query: 85 PRLPHQPSLSRQAVSAVPEIDKEVAEGVPLLSAPRGGNHSAAAAATATATL 135
P P + ++ A P D+ + PR +AA+ T TA L
Sbjct: 888 PPTTQLPQQVQPSLPAAPSADQPQQQ-------PRSQQSTAASVPTPTAPL 931
Score = 27.7 bits (60), Expect = 7.2
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 17/88 (19%)
Query: 5 QASENSKAMETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPIREPG 64
Q S PQ+ +L N+ H + P L + + +P P+ P
Sbjct: 2266 QQQMGSPVQPNPMSPQQ--HMLPNQAQSPHLQGQQIPNSLSNQVR------SPQPVPSP- 2316
Query: 65 LLPNLYHSTPRSKTPLAFPSPRLPHQPS 92
P+S+ P + PSPR+ QPS
Sbjct: 2317 --------RPQSQPPHSSPSPRMQPQPS 2336
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 31.6 bits (70), Expect = 0.50
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 108 VAEGVPLLSAPRGGNHSAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSPG 167
+ E P +S R G ++AAA+A+A A AA+ +C++ +A S A +
Sbjct: 1 MVEKGPEVSGKRRGRNNAAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAA 60
Query: 168 PADRGRD 174
+ G++
Sbjct: 61 APNNGQN 67
>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 31.6 bits (70), Expect = 0.50
Identities = 43/201 (21%), Positives = 69/201 (34%), Gaps = 28/201 (13%)
Query: 14 ETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPIREPGLLPNLYHS- 72
E + QK ++L +E Y + P HL AP P + P++ +
Sbjct: 3700 EAEETAQKMAQLLYLQEESTPYKPQSPSIP----SSHLRFQKAPVGQHLPSVSPSVSDAF 3755
Query: 73 TPRSKTP-------LAFPSPRLPHQPSL--SRQAVSAVPEIDKEVAEGVPLLSAPRGGNH 123
P S P ++ PSP PH P L S + K++ L
Sbjct: 3756 LPPSSQPEESYCLVVSSPSPSSPHSPGLFPSTSEYPGDSRVQKKLGPTSALFVDRASSPI 3815
Query: 124 SAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSP--------------GPA 169
+A+T L+ + SA S + + P +P G +
Sbjct: 3816 LTLSASTQEPGLSPGSLTLSAPSTHPVEGHQKLDSSPDPVDAPRTPMDNYSQTTDELGGS 3875
Query: 170 DRGRDCHQLSHTQRFAQTHAP 190
RGR Q S+ + F + H+P
Sbjct: 3876 QRGRSSLQRSNGRSFLELHSP 3896
>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 31.6 bits (70), Expect = 0.50
Identities = 43/201 (21%), Positives = 69/201 (34%), Gaps = 28/201 (13%)
Query: 14 ETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPIREPGLLPNLYHS- 72
E + QK ++L +E Y + P HL AP P + P++ +
Sbjct: 3700 EAEETAQKMAQLLYLQEESTPYKPQSPSIP----SSHLRFQKAPVGQHLPSVSPSVSDAF 3755
Query: 73 TPRSKTP-------LAFPSPRLPHQPSL--SRQAVSAVPEIDKEVAEGVPLLSAPRGGNH 123
P S P ++ PSP PH P L S + K++ L
Sbjct: 3756 LPPSSQPEESYCLVVSSPSPSSPHSPGLFPSTSEYPGDSRVQKKLGPTSALFVDRASSPI 3815
Query: 124 SAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSP--------------GPA 169
+A+T L+ + SA S + + P +P G +
Sbjct: 3816 LTLSASTQEPGLSPGSLTLSAPSTHPVEGHQKLDSSPDPVDAPRTPMDNYSQTTDELGGS 3875
Query: 170 DRGRDCHQLSHTQRFAQTHAP 190
RGR Q S+ + F + H+P
Sbjct: 3876 QRGRSSLQRSNGRSFLELHSP 3896
>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
containing 9 [Homo sapiens]
Length = 4614
Score = 31.6 bits (70), Expect = 0.50
Identities = 43/201 (21%), Positives = 69/201 (34%), Gaps = 28/201 (13%)
Query: 14 ETVQKPQKAKEILTNEESCAHYHHRDSPYPLHSHPKHLTLTLAPTPIREPGLLPNLYHS- 72
E + QK ++L +E Y + P HL AP P + P++ +
Sbjct: 3700 EAEETAQKMAQLLYLQEESTPYKPQSPSIP----SSHLRFQKAPVGQHLPSVSPSVSDAF 3755
Query: 73 TPRSKTP-------LAFPSPRLPHQPSL--SRQAVSAVPEIDKEVAEGVPLLSAPRGGNH 123
P S P ++ PSP PH P L S + K++ L
Sbjct: 3756 LPPSSQPEESYCLVVSSPSPSSPHSPGLFPSTSEYPGDSRVQKKLGPTSALFVDRASSPI 3815
Query: 124 SAAAAATATATLAASEESCSAVSALRCSQTTFVGAGPGKEHSP--------------GPA 169
+A+T L+ + SA S + + P +P G +
Sbjct: 3816 LTLSASTQEPGLSPGSLTLSAPSTHPVEGHQKLDSSPDPVDAPRTPMDNYSQTTDELGGS 3875
Query: 170 DRGRDCHQLSHTQRFAQTHAP 190
RGR Q S+ + F + H+P
Sbjct: 3876 QRGRSSLQRSNGRSFLELHSP 3896
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.124 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,896,162
Number of Sequences: 37866
Number of extensions: 532033
Number of successful extensions: 2234
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 2064
Number of HSP's gapped (non-prelim): 328
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.