Guide to the Human Genome
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Name: DNAJC12 Sequence: fasta or formatted (107aa) NCBI GI: 41406094
Description:

J domain containing protein 1 isoform b

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt prot [198aa] J domain containing protein 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5          8           1
 C cysteine            1.9          2           1
 D aspartate           6.5          7           1
 E glutamate          11.2         12           2
 F phenylalanine       3.7          4           1
 G glycine             2.8          3           1
 H histidine           2.8          3           1
 I isoleucine          2.8          3           1
 K lysine              6.5          7           1
 L leucine             9.3         10           2
 M methionine          2.8          3           1
 N asparagine          3.7          4           1
 P proline             3.7          4           1
 Q glutamine           5.6          6           2
 R arginine            5.6          6           2
 S serine              7.5          8           2
 T threonine           5.6          6           1
 V valine              4.7          5           1
 W tryptophan          1.9          2           1
 Y tyrosine            3.7          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   J domain containing protein 1 isoform b 
DNAJC12               0.923   J domain containing protein 1 isoform a 
DNAJC17               0.235   DnaJ (Hsp40) homolog, subfamily C, member 17 
DNAJC10               0.189   DnaJ (Hsp40) homolog, subfamily C, member 10 
DNAJB11               0.173   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJC5                0.148   DnaJ (Hsp40) homolog, subfamily C, member 5 
DNAJB7                0.148   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJA3                0.138   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.138   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJC4                0.138   DnaJ (Hsp40) homolog, subfamily C, member 4 
DNAJC5B               0.138   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
DNAJB4                0.128   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJC16               0.128   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJC11               0.128   DnaJ (Hsp40) homolog, subfamily C, member 11 
DNAJB6                0.128   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.128   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
LOC728475             0.117   PREDICTED: hypothetical protein 
LOC728475             0.117   PREDICTED: hypothetical protein 
LOC728475             0.117   PREDICTED: hypothetical protein 
DNAJB5                0.117   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.117   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB12               0.117   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.117   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB5                0.117   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJC7                0.112   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJB2                0.112   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.112   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB3                0.112   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB8                0.112   DnaJ homolog, subfamily B, member 8 
DNAJC7                0.107   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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