Search of human proteins with 239749766

Search of human proteins with 239749766

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749766 PREDICTED: similar to armadillo repeat containing
4 [Homo sapiens]
         (367 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749766 PREDICTED: similar to armadillo repeat containing 4...   747   0.0  
gi|239755234 PREDICTED: similar to armadillo repeat containing 4...   681   0.0  
gi|239744025 PREDICTED: hypothetical protein XP_002343006 [Homo ...   373   e-103
gi|31657114 armadillo repeat containing 4 [Homo sapiens]              300   2e-81
gi|164419758 bromodomain containing 2 [Homo sapiens]                   44   2e-04
gi|4826806 bromodomain containing 2 [Homo sapiens]                     44   2e-04
gi|239755238 PREDICTED: hypothetical protein [Homo sapiens]            44   3e-04
gi|239749762 PREDICTED: hypothetical protein XP_002347151 [Homo ...    44   3e-04
gi|239744021 PREDICTED: hypothetical protein XP_002343019 [Homo ...    44   3e-04
gi|64276486 serologically defined colon cancer antigen 10 [Homo ...    40   0.003
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]                   37   0.028
gi|115529449 upstream binding transcription factor, RNA polymera...    37   0.037
gi|115529451 upstream binding transcription factor, RNA polymera...    37   0.037
gi|7657671 upstream binding transcription factor, RNA polymerase...    37   0.037
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]           36   0.062
gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo ...    36   0.062
gi|115334673 retinoblastoma-binding protein 1 isoform II [Homo s...    36   0.062
gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo sa...    36   0.062
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]     35   0.082
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]     35   0.082
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof...    35   0.082
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof...    35   0.082
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof...    35   0.082
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof...    35   0.082
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof...    35   0.082
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof...    35   0.082
gi|121949802 cancer/testis antigen family 47, member A1 [Homo sa...    35   0.14 
gi|121949798 cancer/testis antigen family 47, member A2 [Homo sa...    35   0.14 
gi|121949773 cancer/testis antigen family 47, member A3 [Homo sa...    35   0.14 
gi|121949771 cancer/testis antigen family 47, member A4 [Homo sa...    35   0.14 

>gi|239749766 PREDICTED: similar to armadillo repeat containing 4
           [Homo sapiens]
          Length = 367

 Score =  747 bits (1929), Expect = 0.0
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 1   MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEEAA 60
           MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEEAA
Sbjct: 1   MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEEAA 60

Query: 61  ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL 120
           ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL
Sbjct: 61  ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL 120

Query: 121 EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL 180
           EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL
Sbjct: 121 EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL 180

Query: 181 VKYLKFSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGLGIEKQTP 240
           VKYLKFSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGLGIEKQTP
Sbjct: 181 VKYLKFSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGLGIEKQTP 240

Query: 241 GRRKEPQAVDSSGGNLGLWIPLGGNLGQQQPEELLRPSGILRLPTFGCLLVANVLQVRTL 300
           GRRKEPQAVDSSGGNLGLWIPLGGNLGQQQPEELLRPSGILRLPTFGCLLVANVLQVRTL
Sbjct: 241 GRRKEPQAVDSSGGNLGLWIPLGGNLGQQQPEELLRPSGILRLPTFGCLLVANVLQVRTL 300

Query: 301 AHSLIQLGRLQNSEVWCYCHLHLTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAGGL 360
           AHSLIQLGRLQNSEVWCYCHLHLTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAGGL
Sbjct: 301 AHSLIQLGRLQNSEVWCYCHLHLTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAGGL 360

Query: 361 CLSWPLT 367
           CLSWPLT
Sbjct: 361 CLSWPLT 367


>gi|239755234 PREDICTED: similar to armadillo repeat containing 4
           [Homo sapiens]
          Length = 362

 Score =  681 bits (1757), Expect = 0.0
 Identities = 335/347 (96%), Positives = 338/347 (97%)

Query: 21  LEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEEAAALHKDISGSGKRSLEKNQIN 80
           L++   N  +L    GISFNEDQQKEKDQLGKAPKKEEAAALHKDISGSGKRSLEKNQIN
Sbjct: 16  LDVFLPNRNVLGYFKGISFNEDQQKEKDQLGKAPKKEEAAALHKDISGSGKRSLEKNQIN 75

Query: 81  FWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAE 140
           FWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAE
Sbjct: 76  FWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAE 135

Query: 141 KIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKFSASLGEEEETELST 200
           KIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKFSASLGEEEETELST
Sbjct: 136 KIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKFSASLGEEEETELST 195

Query: 201 GVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGLGIEKQTPGRRKEPQAVDSSGGNLGLWI 260
           GVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGLGIEKQTPGRRKEPQAVDSSGGNLGLWI
Sbjct: 196 GVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGLGIEKQTPGRRKEPQAVDSSGGNLGLWI 255

Query: 261 PLGGNLGQQQPEELLRPSGILRLPTFGCLLVANVLQVRTLAHSLIQLGRLQNSEVWCYCH 320
           PLGGNLGQQQPEELLRPSGILRLPTFGCLLVANVLQVRTLAHSLIQLGRLQNSEVWCYCH
Sbjct: 256 PLGGNLGQQQPEELLRPSGILRLPTFGCLLVANVLQVRTLAHSLIQLGRLQNSEVWCYCH 315

Query: 321 LHLTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAGGLCLSWPLT 367
           LHLTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAGGLCLSWPLT
Sbjct: 316 LHLTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAGGLCLSWPLT 362


>gi|239744025 PREDICTED: hypothetical protein XP_002343006 [Homo
           sapiens]
          Length = 265

 Score =  373 bits (957), Expect = e-103
 Identities = 184/185 (99%), Positives = 185/185 (100%)

Query: 1   MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEEAA 60
           MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKE+AA
Sbjct: 1   MGVALRKLTQWTAAGHGTGILEITPLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEKAA 60

Query: 61  ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL 120
           ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL
Sbjct: 61  ALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKL 120

Query: 121 EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL 180
           EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL
Sbjct: 121 EKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKL 180

Query: 181 VKYLK 185
           VKYLK
Sbjct: 181 VKYLK 185


>gi|31657114 armadillo repeat containing 4 [Homo sapiens]
          Length = 1044

 Score =  300 bits (767), Expect = 2e-81
 Identities = 147/151 (97%), Positives = 149/151 (98%)

Query: 35  IGISFNEDQQKEKDQLGKAPKKEEAAALHKDISGSGKRSLEKNQINFWRNQMTKRWEPSL 94
           +GISF+EDQQKEKDQLGKAPKKEEAAAL KDISGS KRSLEKNQINFWRNQMTKRWEPSL
Sbjct: 312 LGISFSEDQQKEKDQLGKAPKKEEAAALRKDISGSDKRSLEKNQINFWRNQMTKRWEPSL 371

Query: 95  NWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESE 154
           NWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESE
Sbjct: 372 NWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESE 431

Query: 155 EDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
           EDEEPPDHRQEASADLPSEYWQIQKLVKYLK
Sbjct: 432 EDEEPPDHRQEASADLPSEYWQIQKLVKYLK 462



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 34/35 (97%), Positives = 34/35 (97%)

Query: 1  MGVALRKLTQWTAAGHGTGILEITPLNEVILKEII 35
          MGVALRKLTQWTAAGHGTGILEITPLNE ILKEII
Sbjct: 1  MGVALRKLTQWTAAGHGTGILEITPLNEAILKEII 35


>gi|164419758 bromodomain containing 2 [Homo sapiens]
          Length = 801

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 7/142 (4%)

Query: 138 SAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKFSASLGEEEETE 197
           S    EE+ S+SSSE EE+E+  D  +E S    SE  +  +L + L+       E+   
Sbjct: 478 SESSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEERAHRLAE-LQEQLRAVHEQLAA 536

Query: 198 LSTG--VGRRKVRNRLDTAGKEEGVRTRGRASPPAYGLGIEKQTPGRRKEPQAVDSSGGN 255
           LS G     ++ R + +   K +  + RGRA       G     P + K+ +    SGG 
Sbjct: 537 LSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPPQPKKSKKASGSGGG 596

Query: 256 LGLWIPLG----GNLGQQQPEE 273
                P G    G  G + P++
Sbjct: 597 SAALGPSGFGPSGGSGTKLPKK 618


>gi|4826806 bromodomain containing 2 [Homo sapiens]
          Length = 801

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 7/142 (4%)

Query: 138 SAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKFSASLGEEEETE 197
           S    EE+ S+SSSE EE+E+  D  +E S    SE  +  +L + L+       E+   
Sbjct: 478 SESSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEERAHRLAE-LQEQLRAVHEQLAA 536

Query: 198 LSTG--VGRRKVRNRLDTAGKEEGVRTRGRASPPAYGLGIEKQTPGRRKEPQAVDSSGGN 255
           LS G     ++ R + +   K +  + RGRA       G     P + K+ +    SGG 
Sbjct: 537 LSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPPQPKKSKKASGSGGG 596

Query: 256 LGLWIPLG----GNLGQQQPEE 273
                P G    G  G + P++
Sbjct: 597 SAALGPSGFGPSGGSGTKLPKK 618


>gi|239755238 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 24/36 (66%)

Query: 323 LTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAG 358
           ++ELQDGS H  L W CLGL   D +F  PLLL AG
Sbjct: 25  ISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60


>gi|239749762 PREDICTED: hypothetical protein XP_002347151 [Homo
           sapiens]
          Length = 142

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 24/36 (66%)

Query: 323 LTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAG 358
           ++ELQDGS H  L W CLGL   D +F  PLLL AG
Sbjct: 25  ISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60


>gi|239744021 PREDICTED: hypothetical protein XP_002343019 [Homo
           sapiens]
          Length = 142

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 21/36 (58%), Positives = 24/36 (66%)

Query: 323 LTELQDGSAHHTLSWPCLGLALGDSMFWMPLLLSAG 358
           ++ELQDGS H  L W CLGL   D +F  PLLL AG
Sbjct: 25  ISELQDGSKHLILRWLCLGLVSRDRVFRPPLLLCAG 60


>gi|64276486 serologically defined colon cancer antigen 10 [Homo
           sapiens]
          Length = 472

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 5/125 (4%)

Query: 40  NEDQQKEKDQLGKAPKKEEAAALHKDISGSGK-RSLEKNQI--NFWRNQMTKRWEPSLNW 96
           + D  K+   L   P  E       D+   G+  S E ++      +N M +R    L  
Sbjct: 232 SHDLLKDDPHLSSVPVVESEKGDAPDLVDDGEDESAEHDEYIDGDEKNLMRERIAKKLKK 291

Query: 97  KTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEED 156
            T+ N K  G  +   E K   + E+ R      + +LL    +K+E     +   SEE+
Sbjct: 292 DTSANVKSAGEGEV--EKKSVSRSEELRKEARQLKRELLAAKQKKVENAAKQAEKRSEEE 349

Query: 157 EEPPD 161
           E PPD
Sbjct: 350 EAPPD 354


>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
          Length = 1417

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 3/171 (1%)

Query: 30   ILKEIIGISFNE-DQQKEKDQLGKAPKKEEAAALHKDISGSGKRSLEKNQINFWRNQMTK 88
            I KE + +  N+ +  KEK +     K EE   L K++        E ++ N       +
Sbjct: 853  ICKEELVLHLNQLEGNKEKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQ 912

Query: 89   RWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSD 148
            + +  L  +T  N  G+    + + +K   KLE+         A+ LRK  EK E    +
Sbjct: 913  QQQQMLQQETIRN--GELEDTQTKLEKQVSKLEQELQKQRESSAEKLRKMEEKCESAAHE 970

Query: 149  SSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKFSASLGEEEETELS 199
            +  + ++  E     ++   ++     ++ K+ K +      GE +   LS
Sbjct: 971  ADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLS 1021


>gi|115529449 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 19  GILEITPLNEVILKEIIGISFNEDQQKEKDQLGK-APKKEEAAALHKDI----SGSGKRS 73
           G L   PL E +++  IG  +    Q +K+   K A ++++   +H D+         R+
Sbjct: 549 GELNHLPLKERMVE--IGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRA 606

Query: 74  LEKNQINFWRNQMTKRWEPS-LNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRA 132
             K  I+  R  MTK   P+  + +TT+  K +    + +++    + E+     +   +
Sbjct: 607 AYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSS 666

Query: 133 QLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSE 173
           +    S+E   E  S+   E+EED+E  D  ++   D  +E
Sbjct: 667 EDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 707


>gi|115529451 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 19  GILEITPLNEVILKEIIGISFNEDQQKEKDQLGK-APKKEEAAALHKDI----SGSGKRS 73
           G L   PL E +++  IG  +    Q +K+   K A ++++   +H D+         R+
Sbjct: 549 GELNHLPLKERMVE--IGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRA 606

Query: 74  LEKNQINFWRNQMTKRWEPS-LNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRA 132
             K  I+  R  MTK   P+  + +TT+  K +    + +++    + E+     +   +
Sbjct: 607 AYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSS 666

Query: 133 QLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSE 173
           +    S+E   E  S+   E+EED+E  D  ++   D  +E
Sbjct: 667 EDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 707


>gi|7657671 upstream binding transcription factor, RNA polymerase I
           isoform a [Homo sapiens]
          Length = 764

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 19  GILEITPLNEVILKEIIGISFNEDQQKEKDQLGK-APKKEEAAALHKDI----SGSGKRS 73
           G L   PL E +++  IG  +    Q +K+   K A ++++   +H D+         R+
Sbjct: 586 GELNHLPLKERMVE--IGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRA 643

Query: 74  LEKNQINFWRNQMTKRWEPS-LNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRA 132
             K  I+  R  MTK   P+  + +TT+  K +    + +++    + E+     +   +
Sbjct: 644 AYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSS 703

Query: 133 QLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSE 173
           +    S+E   E  S+   E+EED+E  D  ++   D  +E
Sbjct: 704 EDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 744


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score = 35.8 bits (81), Expect = 0.062
 Identities = 19/69 (27%), Positives = 28/69 (40%)

Query: 109 KEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASA 168
           K+I   +  GK +     V        +K  E+ EE   D   E +EDE+  D   E   
Sbjct: 293 KDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEDEDEEDDEDEEDG 352

Query: 169 DLPSEYWQI 177
           D    +WQ+
Sbjct: 353 DDEQSHWQL 361


>gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo
           sapiens]
          Length = 1188

 Score = 35.8 bits (81), Expect = 0.062
 Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 42/184 (22%)

Query: 25  PLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEEAAALHKDISGSGKRSLEKNQINFWRN 84
           PL EV  +    I  N + ++E+ +L K+P+     A  +D++ S K+ +E+        
Sbjct: 439 PLTEVKSEPEENIDSNSESEREEIEL-KSPRGRRRIA--RDVN-SIKKEIEE-------- 486

Query: 85  QMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEE 144
              ++ E  L    T N       K++ +D  T   EK    +  GR    ++  +KI++
Sbjct: 487 ---EKTEDKLKDNDTEN-------KDVDDDYETA--EKKENELLLGRKNTPKQKEKKIKK 534

Query: 145 TVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVGR 204
              DS  +S+E+EE    R+E  +   SE                 GEE+E ++   +  
Sbjct: 535 Q-EDSDKDSDEEEEKSQEREETESKCDSE-----------------GEEDEEDMEPCLTG 576

Query: 205 RKVR 208
            KV+
Sbjct: 577 TKVK 580


>gi|115334673 retinoblastoma-binding protein 1 isoform II [Homo
           sapiens]
          Length = 1203

 Score = 35.8 bits (81), Expect = 0.062
 Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 42/184 (22%)

Query: 25  PLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEEAAALHKDISGSGKRSLEKNQINFWRN 84
           PL EV  +    I  N + ++E+ +L K+P+     A  +D++ S K+ +E+        
Sbjct: 439 PLTEVKSEPEENIDSNSESEREEIEL-KSPRGRRRIA--RDVN-SIKKEIEE-------- 486

Query: 85  QMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEE 144
              ++ E  L    T N       K++ +D  T   EK    +  GR    ++  +KI++
Sbjct: 487 ---EKTEDKLKDNDTEN-------KDVDDDYETA--EKKENELLLGRKNTPKQKEKKIKK 534

Query: 145 TVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVGR 204
              DS  +S+E+EE    R+E  +   SE                 GEE+E ++   +  
Sbjct: 535 Q-EDSDKDSDEEEEKSQEREETESKCDSE-----------------GEEDEEDMEPCLTG 576

Query: 205 RKVR 208
            KV+
Sbjct: 577 TKVK 580


>gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo
           sapiens]
          Length = 1257

 Score = 35.8 bits (81), Expect = 0.062
 Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 42/184 (22%)

Query: 25  PLNEVILKEIIGISFNEDQQKEKDQLGKAPKKEEAAALHKDISGSGKRSLEKNQINFWRN 84
           PL EV  +    I  N + ++E+ +L K+P+     A  +D++ S K+ +E+        
Sbjct: 439 PLTEVKSEPEENIDSNSESEREEIEL-KSPRGRRRIA--RDVN-SIKKEIEE-------- 486

Query: 85  QMTKRWEPSLNWKTTVNYKGKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEE 144
              ++ E  L    T N       K++ +D  T   EK    +  GR    ++  +KI++
Sbjct: 487 ---EKTEDKLKDNDTEN-------KDVDDDYETA--EKKENELLLGRKNTPKQKEKKIKK 534

Query: 145 TVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVGR 204
              DS  +S+E+EE    R+E  +   SE                 GEE+E ++   +  
Sbjct: 535 Q-EDSDKDSDEEEEKSQEREETESKCDSE-----------------GEEDEEDMEPCLTG 576

Query: 205 RKVR 208
            KV+
Sbjct: 577 TKVK 580


>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
          Length = 770

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 104 GKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHR 163
           G GS +E +E++     E+   S S    +   +  E+ EET S+S   SE+  E     
Sbjct: 275 GSGSEEEEEEEEE----EEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVS-E 329

Query: 164 QEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVG 203
           +E S D   E      +V   +F    GE EE E   G G
Sbjct: 330 EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEG 369



 Score = 28.5 bits (62), Expect = 10.0
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 126 SVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
           S   G      +  E+ EE    +S ESEE+EE  +  +E +    SE    Q   +  +
Sbjct: 271 SAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS-NSEEASEQSAEEVSE 329

Query: 186 FSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGL 233
              S  EE E E    V      +R D+   EE     G  +P +  L
Sbjct: 330 EEMSEDEERENENHLLVVPESRFDR-DSGESEEAEEEVGEGTPQSSAL 376


>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
          Length = 780

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 104 GKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHR 163
           G GS +E +E++     E+   S S    +   +  E+ EET S+S   SE+  E     
Sbjct: 285 GSGSEEEEEEEEE----EEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVS-E 339

Query: 164 QEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVG 203
           +E S D   E      +V   +F    GE EE E   G G
Sbjct: 340 EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEG 379



 Score = 28.5 bits (62), Expect = 10.0
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 126 SVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
           S   G      +  E+ EE    +S ESEE+EE  +  +E +    SE    Q   +  +
Sbjct: 281 SAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS-NSEEASEQSAEEVSE 339

Query: 186 FSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGL 233
              S  EE E E    V      +R D+   EE     G  +P +  L
Sbjct: 340 EEMSEDEERENENHLLVVPESRFDR-DSGESEEAEEEVGEGTPQSSAL 386


>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           9 [Homo sapiens]
          Length = 771

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 104 GKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHR 163
           G GS +E +E++     E+   S S    +   +  E+ EET S+S   SE+  E     
Sbjct: 276 GSGSEEEEEEEEE----EEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVS-E 330

Query: 164 QEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVG 203
           +E S D   E      +V   +F    GE EE E   G G
Sbjct: 331 EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEG 370



 Score = 28.5 bits (62), Expect = 10.0
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 126 SVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
           S   G      +  E+ EE    +S ESEE+EE  +  +E +    SE    Q   +  +
Sbjct: 272 SAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS-NSEEASEQSAEEVSE 330

Query: 186 FSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGL 233
              S  EE E E    V      +R D+   EE     G  +P +  L
Sbjct: 331 EEMSEDEERENENHLLVVPESRFDR-DSGESEEAEEEVGEGTPQSSAL 377


>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           8 [Homo sapiens]
          Length = 780

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 104 GKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHR 163
           G GS +E +E++     E+   S S    +   +  E+ EET S+S   SE+  E     
Sbjct: 285 GSGSEEEEEEEEE----EEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVS-E 339

Query: 164 QEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVG 203
           +E S D   E      +V   +F    GE EE E   G G
Sbjct: 340 EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEG 379



 Score = 28.5 bits (62), Expect = 10.0
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 126 SVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
           S   G      +  E+ EE    +S ESEE+EE  +  +E +    SE    Q   +  +
Sbjct: 281 SAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS-NSEEASEQSAEEVSE 339

Query: 186 FSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGL 233
              S  EE E E    V      +R D+   EE     G  +P +  L
Sbjct: 340 EEMSEDEERENENHLLVVPESRFDR-DSGESEEAEEEVGEGTPQSSAL 386


>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           5 [Homo sapiens]
          Length = 748

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 104 GKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHR 163
           G GS +E +E++     E+   S S    +   +  E+ EET S+S   SE+  E     
Sbjct: 253 GSGSEEEEEEEEE----EEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVS-E 307

Query: 164 QEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVG 203
           +E S D   E      +V   +F    GE EE E   G G
Sbjct: 308 EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEG 347



 Score = 28.5 bits (62), Expect = 10.0
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 126 SVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
           S   G      +  E+ EE    +S ESEE+EE  +  +E +    SE    Q   +  +
Sbjct: 249 SAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS-NSEEASEQSAEEVSE 307

Query: 186 FSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGL 233
              S  EE E E    V      +R D+   EE     G  +P +  L
Sbjct: 308 EEMSEDEERENENHLLVVPESRFDR-DSGESEEAEEEVGEGTPQSSAL 354


>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           4 [Homo sapiens]
          Length = 737

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 104 GKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHR 163
           G GS +E +E++     E+   S S    +   +  E+ EET S+S   SE+  E     
Sbjct: 242 GSGSEEEEEEEEE----EEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVS-E 296

Query: 164 QEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVG 203
           +E S D   E      +V   +F    GE EE E   G G
Sbjct: 297 EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEG 336



 Score = 28.5 bits (62), Expect = 10.0
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 126 SVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
           S   G      +  E+ EE    +S ESEE+EE  +  +E +    SE    Q   +  +
Sbjct: 238 SAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS-NSEEASEQSAEEVSE 296

Query: 186 FSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGL 233
              S  EE E E    V      +R D+   EE     G  +P +  L
Sbjct: 297 EEMSEDEERENENHLLVVPESRFDR-DSGESEEAEEEVGEGTPQSSAL 343


>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           3 [Homo sapiens]
          Length = 526

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 104 GKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHR 163
           G GS +E +E++     E+   S S    +   +  E+ EET S+S   SE+  E     
Sbjct: 31  GSGSEEEEEEEEE----EEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVS-E 85

Query: 164 QEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVG 203
           +E S D   E      +V   +F    GE EE E   G G
Sbjct: 86  EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEG 125



 Score = 28.5 bits (62), Expect = 10.0
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 126 SVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
           S   G      +  E+ EE    +S ESEE+EE  +  +E +    SE    Q   +  +
Sbjct: 27  SAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS-NSEEASEQSAEEVSE 85

Query: 186 FSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGL 233
              S  EE E E    V      +R D+   EE     G  +P +  L
Sbjct: 86  EEMSEDEERENENHLLVVPESRFDR-DSGESEEAEEEVGEGTPQSSAL 132


>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           2 [Homo sapiens]
          Length = 782

 Score = 35.4 bits (80), Expect = 0.082
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 104 GKGSAKEIQEDKHTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHR 163
           G GS +E +E++     E+   S S    +   +  E+ EET S+S   SE+  E     
Sbjct: 287 GSGSEEEEEEEEE----EEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVS-E 341

Query: 164 QEASADLPSEYWQIQKLVKYLKFSASLGEEEETELSTGVG 203
           +E S D   E      +V   +F    GE EE E   G G
Sbjct: 342 EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEG 381



 Score = 28.5 bits (62), Expect = 10.0
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 2/108 (1%)

Query: 126 SVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSEYWQIQKLVKYLK 185
           S   G      +  E+ EE    +S ESEE+EE  +  +E +    SE    Q   +  +
Sbjct: 283 SAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS-NSEEASEQSAEEVSE 341

Query: 186 FSASLGEEEETELSTGVGRRKVRNRLDTAGKEEGVRTRGRASPPAYGL 233
              S  EE E E    V      +R D+   EE     G  +P +  L
Sbjct: 342 EEMSEDEERENENHLLVVPESRFDR-DSGESEEAEEEVGEGTPQSSAL 388


>gi|121949802 cancer/testis antigen family 47, member A1 [Homo
           sapiens]
          Length = 288

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 123 PRPSVSHGRAQLLRKSAEK-IEETVSDSSSESEEDEEPPDHRQEA-SADLPSEYWQIQKL 180
           P P+V    A++ R+ AE+  EE +S+ ++E  + EEP      A  A  P E  + Q  
Sbjct: 196 PEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPE 255

Query: 181 VKYLKFSASLGEEEETELSTGVGRRKVRNRLDT 213
               +   + GEEE+ +        KV+N   T
Sbjct: 256 KWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288


>gi|121949798 cancer/testis antigen family 47, member A2 [Homo
           sapiens]
          Length = 288

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 123 PRPSVSHGRAQLLRKSAEK-IEETVSDSSSESEEDEEPPDHRQEA-SADLPSEYWQIQKL 180
           P P+V    A++ R+ AE+  EE +S+ ++E  + EEP      A  A  P E  + Q  
Sbjct: 196 PEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPE 255

Query: 181 VKYLKFSASLGEEEETELSTGVGRRKVRNRLDT 213
               +   + GEEE+ +        KV+N   T
Sbjct: 256 KWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288


>gi|121949773 cancer/testis antigen family 47, member A3 [Homo
           sapiens]
          Length = 288

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 123 PRPSVSHGRAQLLRKSAEK-IEETVSDSSSESEEDEEPPDHRQEA-SADLPSEYWQIQKL 180
           P P+V    A++ R+ AE+  EE +S+ ++E  + EEP      A  A  P E  + Q  
Sbjct: 196 PEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPE 255

Query: 181 VKYLKFSASLGEEEETELSTGVGRRKVRNRLDT 213
               +   + GEEE+ +        KV+N   T
Sbjct: 256 KWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288


>gi|121949771 cancer/testis antigen family 47, member A4 [Homo
           sapiens]
          Length = 288

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 123 PRPSVSHGRAQLLRKSAEK-IEETVSDSSSESEEDEEPPDHRQEA-SADLPSEYWQIQKL 180
           P P+V    A++ R+ AE+  EE +S+ ++E  + EEP      A  A  P E  + Q  
Sbjct: 196 PEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPE 255

Query: 181 VKYLKFSASLGEEEETELSTGVGRRKVRNRLDT 213
               +   + GEEE+ +        KV+N   T
Sbjct: 256 KWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT 288


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.132    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,592,369
Number of Sequences: 37866
Number of extensions: 771263
Number of successful extensions: 3396
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 3142
Number of HSP's gapped (non-prelim): 387
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.