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Search of human proteins with 239749581
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
(122 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 257 2e-69
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 252 6e-68
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 243 2e-65
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 216 4e-57
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 212 6e-56
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 204 1e-53
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 204 1e-53
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 204 1e-53
gi|239752497 PREDICTED: similar to family with sequence similari... 192 5e-50
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 182 4e-47
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 182 4e-47
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 182 4e-47
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 182 5e-47
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ... 182 5e-47
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ... 182 5e-47
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 182 5e-47
gi|169184221 PREDICTED: family with sequence similarity 27, memb... 176 3e-45
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 173 3e-44
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 162 8e-41
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ... 51 2e-07
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 41 2e-04
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] 40 3e-04
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 38 0.002
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 37 0.003
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 37 0.003
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|148746195 trichohyalin [Homo sapiens] 37 0.004
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 35 0.014
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 33 0.040
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 33 0.040
>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
Length = 122
Score = 257 bits (656), Expect = 2e-69
Identities = 122/122 (100%), Positives = 122/122 (100%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALKHTPPG 120
HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALKHTPPG
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALKHTPPG 120
Query: 121 NP 122
NP
Sbjct: 121 NP 122
>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
Length = 124
Score = 252 bits (643), Expect = 6e-68
Identities = 122/124 (98%), Positives = 122/124 (98%), Gaps = 2/124 (1%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN--HTHTETHTQRHTEEALKHTP 118
HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN HTHTETHTQRHTEEALKHTP
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP 120
Query: 119 PGNP 122
PGNP
Sbjct: 121 PGNP 124
>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
sapiens]
Length = 125
Score = 243 bits (621), Expect = 2e-65
Identities = 119/125 (95%), Positives = 119/125 (95%), Gaps = 3/125 (2%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTE---THTQRHTEEALKHT 117
HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN HT THTQRHTEEALKHT
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHTTHTQRHTEEALKHT 120
Query: 118 PPGNP 122
PPGNP
Sbjct: 121 PPGNP 125
>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 216 bits (549), Expect = 4e-57
Identities = 103/126 (81%), Positives = 110/126 (87%), Gaps = 4/126 (3%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLR+RRISSRGPG KADP ++KRLT GLMTQ ETQKEA QRQAAMR+TALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN----HTHTETHTQRHTEEALKH 116
TGH++PKTHTHTG+HTQTHRERERNTQRLRDRERREN HTHT THTQRHT EALKH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 212 bits (539), Expect = 6e-56
Identities = 101/126 (80%), Positives = 109/126 (86%), Gaps = 4/126 (3%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLR+RRISSRGPG KADP ++KRLT GLMTQ ETQKEA QRQAAMR+TALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRE----NHTHTETHTQRHTEEALKH 116
TGH++PKTHTHTG+HTQTHRERERNTQRLRDRERRE H HT+THTQRHT EALKH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRETGRHTHRHTQTHTQRHTAEALKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 122
Score = 204 bits (520), Expect = 1e-53
Identities = 98/122 (80%), Positives = 105/122 (86%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALKHTPPG 120
TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERREN HT T T+ HT EALKHTPPG
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
Query: 121 NP 122
NP
Sbjct: 121 NP 122
>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
sapiens]
Length = 122
Score = 204 bits (520), Expect = 1e-53
Identities = 98/122 (80%), Positives = 105/122 (86%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALKHTPPG 120
TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERREN HT T T+ HT EALKHTPPG
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
Query: 121 NP 122
NP
Sbjct: 121 NP 122
>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
Length = 122
Score = 204 bits (520), Expect = 1e-53
Identities = 98/122 (80%), Positives = 105/122 (86%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALKHTPPG 120
TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERREN HT T T+ HT EALKHTPPG
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
Query: 121 NP 122
NP
Sbjct: 121 NP 122
>gi|239752497 PREDICTED: similar to family with sequence similarity
27, member D1, partial [Homo sapiens]
Length = 122
Score = 192 bits (488), Expect = 5e-50
Identities = 94/122 (77%), Positives = 102/122 (83%), Gaps = 6/122 (4%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLR++RISSRGPG H KAD ++KRLT GLMTQAE +KEA QRQAAMR+TALW
Sbjct: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRE------NHTHTETHTQRHTEEAL 114
TGH+ PKTHTHTG+HTQTHRERERNTQRLRDRERRE HTHTETHTQ HT EAL
Sbjct: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
Query: 115 KH 116
KH
Sbjct: 121 KH 122
>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 182 bits (463), Expect = 4e-47
Identities = 91/126 (72%), Positives = 101/126 (80%), Gaps = 4/126 (3%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGM +QLLRDRR+SSRGPGLH+ K +P+Q+K LT G TQAETQK A QRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTE----THTQRHTEEALKH 116
TGH++PKTH HTG HTQT RERERNTQRLRDRERREN HT+ THTQ HT A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 182 bits (463), Expect = 4e-47
Identities = 91/126 (72%), Positives = 101/126 (80%), Gaps = 4/126 (3%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGM +QLLRDRR+SSRGPGLH+ K +P+Q+K LT G TQAETQK A QRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTE----THTQRHTEEALKH 116
TGH++PKTH HTG HTQT RERERNTQRLRDRERREN HT+ THTQ HT A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 182 bits (463), Expect = 4e-47
Identities = 91/126 (72%), Positives = 101/126 (80%), Gaps = 4/126 (3%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGM +QLLRDRR+SSRGPGLH+ K +P+Q+K LT G TQAETQK A QRQAAMR+ AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTE----THTQRHTEEALKH 116
TGH++PKTH HTG HTQT RERERNTQRLRDRERREN HT+ THTQ HT A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 131
Score = 182 bits (462), Expect = 5e-47
Identities = 91/121 (75%), Positives = 99/121 (81%), Gaps = 7/121 (5%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN----HTHTETHTQRHTEEALKH 116
TGH++PKTHTH G H QTHR+RERNTQRLRDRERREN HTHT+THT HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
Query: 117 T 117
T
Sbjct: 118 T 118
>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
sapiens]
Length = 131
Score = 182 bits (462), Expect = 5e-47
Identities = 91/121 (75%), Positives = 99/121 (81%), Gaps = 7/121 (5%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN----HTHTETHTQRHTEEALKH 116
TGH++PKTHTH G H QTHR+RERNTQRLRDRERREN HTHT+THT HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
Query: 117 T 117
T
Sbjct: 118 T 118
>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
sapiens]
Length = 174
Score = 182 bits (462), Expect = 5e-47
Identities = 91/121 (75%), Positives = 99/121 (81%), Gaps = 7/121 (5%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN----HTHTETHTQRHTEEALKH 116
TGH++PKTHTH G H QTHR+RERNTQRLRDRERREN HTHT+THT HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
Query: 117 T 117
T
Sbjct: 118 T 118
>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 174
Score = 182 bits (462), Expect = 5e-47
Identities = 91/121 (75%), Positives = 99/121 (81%), Gaps = 7/121 (5%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDRRISSRGPG H KADP ++K+LTTGLMTQAETQKEA QRQAAM +T LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN----HTHTETHTQRHTEEALKH 116
TGH++PKTHTH G H QTHR+RERNTQRLRDRERREN HTHT+THT HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTH---KH 117
Query: 117 T 117
T
Sbjct: 118 T 118
>gi|169184221 PREDICTED: family with sequence similarity 27, member
E3 [Homo sapiens]
Length = 113
Score = 176 bits (447), Expect = 3e-45
Identities = 84/109 (77%), Positives = 94/109 (86%)
Query: 6 QLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
QLLRDRRISSRGPGLH KA+P+++K LTTGLMTQAE QK+A QRQAAMR+TALW TGH+
Sbjct: 5 QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEAL 114
+P+THTHTG HTQT RERERNTQRLRDRERREN HT T+T RHT L
Sbjct: 65 RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 113
Score = 173 bits (439), Expect = 3e-44
Identities = 83/109 (76%), Positives = 93/109 (85%)
Query: 6 QLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
QLLRDRRISSRGPGLH KA+ +++K LTTGLMTQAE QK+A QRQAAMR+TALW TGH+
Sbjct: 5 QLLRDRRISSRGPGLHTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEAL 114
+P+THTHTG HTQT RERERNTQRLRDRERREN HT T+T RHT L
Sbjct: 65 RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 134
Score = 162 bits (409), Expect = 8e-41
Identities = 85/140 (60%), Positives = 97/140 (69%), Gaps = 24/140 (17%)
Query: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
MGMR QLLRDR ISS GPGLH KA P++++RLTTG TQAETQKEA QRQA MR+ ALW
Sbjct: 1 MGMRFQLLRDRCISSHGPGLHTPKAGPRRRRRLTTGCTTQAETQKEAHQRQADMREIALW 60
Query: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERREN------------------HTHT 102
TG ++P+T + QT RERERNTQR RD+ER+EN HTHT
Sbjct: 61 RTGRIRPET------YMQTDRERERNTQRPRDKERKENGRHTHTHTLTHTHSHTHTHTHT 114
Query: 103 ETHTQRHTEEALKHTPPGNP 122
+THTQ H EALKHTPPGNP
Sbjct: 115 QTHTQDHRAEALKHTPPGNP 134
>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
sapiens]
Length = 228
Score = 51.2 bits (121), Expect = 2e-07
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 18 PGLHRAKADPQQQ---KRLTTGLMTQAETQKEAQQRQAAM-RKTALWHTGHLQPK-THTH 72
P L R P+ + KRL TG TQAET+ EA Q++ R A G P+ THT
Sbjct: 2 PTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRRTHTQ 61
Query: 73 TGMHTQTHRERERN-----TQRLRDRERREN----------HTHTETHTQRHT 110
T + R +ER +R R+R +RE HTHT+TH HT
Sbjct: 62 TDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHTHT 114
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 41.2 bits (95), Expect = 2e-04
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 28 QQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNT 87
++QK + T ET +E +++ R+T + KT H + RER+R
Sbjct: 125 EKQKEMGRERQTDRETDRERERQAERERETGR------ERKTEDR---HRERERERKRER 175
Query: 88 QRLRDRERRENHTHTETHTQRHTE 111
+R R+ + RE HT E QR T+
Sbjct: 176 ERKRETKERERHTDMERERQRETD 199
Score = 37.4 bits (85), Expect = 0.003
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 14/117 (11%)
Query: 9 RDRRISSRGPGLHRAK---ADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
RDR S+ H + D ++ + + +T +E ++++ R
Sbjct: 31 RDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETER 90
Query: 66 QPKTHTHTGMHTQTHRER----ERNTQRLRDRER-------RENHTHTETHTQRHTE 111
+ T HT+T RER ER +R+RDRER RE T ET +R +
Sbjct: 91 ERDKERETDRHTETDRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQ 147
Score = 32.3 bits (72), Expect = 0.090
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 70 HTHTGMHTQTH-RERERNTQRLRDR--ERRENHTHTETHTQRHTE 111
HTHT T RER R T R RDR E + H+E QR E
Sbjct: 9 HTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRE 53
Score = 32.0 bits (71), Expect = 0.12
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 26 DPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERER 85
D +++ T + + QKE + + R+ + +T T + ERER
Sbjct: 93 DKERETDRHTETDRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERER 152
Query: 86 NTQRLR---DRER-RENHTHTETHTQRHTEEALKHT 117
T R R DR R RE E +R T+E +HT
Sbjct: 153 ETGRERKTEDRHRERERERKRERERKRETKERERHT 188
Score = 29.6 bits (65), Expect = 0.58
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 76 HTQTHRERERNTQRLRDRER 95
HT RER+R T R RDR+R
Sbjct: 187 HTDMERERQRETDRKRDRQR 206
Score = 26.2 bits (56), Expect = 6.5
Identities = 29/100 (29%), Positives = 38/100 (38%), Gaps = 23/100 (23%)
Query: 34 TTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHT-HTGMHTQTHRER--------- 83
T G T ET+ +QR+ R+T + KT H+ Q RER
Sbjct: 5 TEGRHTHTETETMDRQRERR-RETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDRE 63
Query: 84 -----ERNTQRLRDRER-------RENHTHTETHTQRHTE 111
+R +R R+RER E E T RHTE
Sbjct: 64 REKQTDREGERQRERERDRDRQRETERERDKERETDRHTE 103
>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 40.4 bits (93), Expect = 3e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 69 THTHTGMHTQTHRERERNTQRLRDRER 95
THTHT HT+ RE ER T+R R+RER
Sbjct: 74 THTHTHTHTENERESERETERERERER 100
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 37.7 bits (86), Expect = 0.002
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPK 68
R R ++ H + ++++R T T+ E +++ + + RKT Q +
Sbjct: 193 RQREKENKTEDRHSERGRERERERETE---TETERKRQTDRERDRQRKTE--REREKQAE 247
Query: 69 THTHTGMHTQTHRERERNTQRLRDRERR--ENHTHTETHTQRHTE 111
+ T+ +ERER R RDR+RR E T+ QR TE
Sbjct: 248 RERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTE 292
Score = 37.0 bits (84), Expect = 0.004
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 24 KADPQQQKRLTTGLMTQAETQKEAQQRQAAMR---KTALWHTGHLQPKTHTHTGMHTQTH 80
+ D ++Q++ + E +K Q+R+ R K H + T+T
Sbjct: 162 QTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETE 221
Query: 81 RERERNTQRLRDRER-----RENHTHTETHTQRHTE 111
ER+R T R RDR+R RE E ++R TE
Sbjct: 222 TERKRQTDRERDRQRKTEREREKQAERERASERETE 257
Score = 33.1 bits (74), Expect = 0.053
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Query: 14 SSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHT 73
S R GL +A D R + +++ Q + RK K H
Sbjct: 36 SPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHR 95
Query: 74 GMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTE 111
+ERER T R RDR+ RE + + +R TE
Sbjct: 96 ERQRDREKERERQTDRERDRQ-REKERNRQKERERETE 132
Score = 32.7 bits (73), Expect = 0.069
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 42 ETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRER-RENHT 100
+ Q + Q+ + R + T + Q RERE+N Q R+RER RE
Sbjct: 140 DRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKEN 199
Query: 101 HTETHTQRHTE 111
TE RH+E
Sbjct: 200 KTE---DRHSE 207
Score = 32.7 bits (73), Expect = 0.069
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 24 KADPQQQKRLTTGLMTQAETQKEAQQRQAAMR-----KTALWHTGHLQPKTHTHTGMHTQ 78
K + +++K+ ++ ET+++ ++ + R + K T +
Sbjct: 237 KTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRE 296
Query: 79 THRERERNTQRLRDRER-----RENHTHTETHTQRHTE 111
T R+RER +R R+RER RE E QR TE
Sbjct: 297 TERKRERQRERERERERNRKRERERERERERERQRETE 334
Score = 32.7 bits (73), Expect = 0.069
Identities = 18/88 (20%), Positives = 37/88 (42%)
Query: 24 KADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRER 83
K + ++++ + E +E ++ + R+T + + Q + RER
Sbjct: 316 KRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERER 375
Query: 84 ERNTQRLRDRERRENHTHTETHTQRHTE 111
ER+ Q R+RE RE + +R +
Sbjct: 376 ERDRQSAREREERERDRDRDRQKERERQ 403
Score = 29.6 bits (65), Expect = 0.58
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 78 QTHRERERNTQRLRDRER-RENHTHTETHTQRHTEEALK 115
QT RER+R T+R R +ER RE + +R E+ K
Sbjct: 162 QTDRERQRQTERNRQKEREREKNRQERRERERQREKENK 200
Score = 28.9 bits (63), Expect = 1.00
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 40 QAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRER---R 96
Q + +KE +++ R + Q + T + R+R+ + QR R+R+R +
Sbjct: 98 QRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEK 157
Query: 97 ENHTHTETHTQRHTE 111
E T+ QR TE
Sbjct: 158 ERERQTDRERQRQTE 172
Score = 27.7 bits (60), Expect = 2.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 81 RERERNTQRLRDRERRENHTHTETHTQRHTEE 112
RER R +R R RE+R+ T+ +R E+
Sbjct: 54 RERNRQKERERRREKRQTERETDRKRERRREK 85
Score = 27.3 bits (59), Expect = 2.9
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 24 KADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRER 83
K + Q+++ + E ++E ++ + R+T + K T M + +R+
Sbjct: 300 KRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQT 359
Query: 84 ERNTQRLRDRERRENHTHTETHTQRHTEE 112
R +R +RE RE + + R EE
Sbjct: 360 GREGRRQAERE-RERERERDRQSAREREE 387
Score = 26.9 bits (58), Expect = 3.8
Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 6/117 (5%)
Query: 9 RDRRISSRGPGLHRAKADPQQQK---RLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
R+R + G +A+ + ++++ R + + E ++ +++ R+T G
Sbjct: 353 RERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQR 412
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRER---RENHTHTETHTQRHTEEALKHTPP 119
+ + ++ R RER +R + + R RE T + QR + PP
Sbjct: 413 ETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPP 469
Score = 26.6 bits (57), Expect = 4.9
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 39 TQAETQKEAQQ---RQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRER 95
T+ + +KE ++ RQ M + TG + + RER+R + R R+
Sbjct: 333 TERDREKERERKRKRQTEMDRERNRQTGR---EGRRQAERERERERERDRQSAREREERE 389
Query: 96 RENHTHTETHTQRHTEE 112
R+ + +R TE+
Sbjct: 390 RDRDRDRQKERERQTEK 406
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 LRDRRISSRGP--GLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
+RDRR S+R R P +++R + T + ++ R RK G+L
Sbjct: 591 IRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDD-QRGNL 649
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEE 112
+H H G + R++ER+ +DR++++ E ++ ++
Sbjct: 650 SGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQK 696
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 LRDRRISSRGP--GLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHL 65
+RDRR S+R R P +++R + T + ++ R RK G+L
Sbjct: 591 IRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDD-QRGNL 649
Query: 66 QPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEE 112
+H H G + R++ER+ +DR++++ E ++ ++
Sbjct: 650 SGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQK 696
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 37.0 bits (84), Expect = 0.004
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 28 QQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNT 87
++++ G T+ E ++ ++ R+ H Q H QT RE+ER
Sbjct: 6 ERKRETDRGKETERERDRQRERENQTERENR-----HRQRDRHRERDR--QTDREKERER 58
Query: 88 QRLRDRER-RENHTHTETHTQRHTE 111
Q+ RDR+R RE T ET QR +
Sbjct: 59 QKERDRQRQRERETERETERQRERQ 83
Score = 34.3 bits (77), Expect = 0.024
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 15/118 (12%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAM------------RK 56
RDR+ + + D Q+Q+ T T+ + +++ Q+ + RK
Sbjct: 46 RDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERK 105
Query: 57 TALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRER---RENHTHTETHTQRHTE 111
K T+ R+RER QR R+RER RE T+ QR E
Sbjct: 106 RETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAE 163
Score = 30.8 bits (68), Expect = 0.26
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPK 68
R+R + HR + D +++ T + E QKE +++ R+T +
Sbjct: 25 RERENQTERENRHRQR-DRHRERDRQTDREKERERQKERDRQRQRERET----------E 73
Query: 69 THTHTGMHTQTHRERERNTQRL----RDRERRENHTHTETHTQRHTEEALKHT 117
T Q RER+R T R RDRER+ ++ E K T
Sbjct: 74 RETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQT 126
Score = 26.6 bits (57), Expect = 4.9
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 68 KTHTHTGMHTQTHRER--ERNTQRLRDRERRENHTHTETHTQRHTEE 112
K T G T+ R+R ER Q R+ R+ H E Q E+
Sbjct: 8 KRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREK 54
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 37.0 bits (84), Expect = 0.004
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 6 QLLRDRRISSRGPGLHRAKA-DPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGH 64
QL R++ R L R + +QQ R L + + ++E Q R+ +
Sbjct: 363 QLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRRE 422
Query: 65 LQPKTHTHTGMHTQTHRERERNTQRL-RDRERRENHTHTETHTQRHTEEALK 115
Q + H Q H E+ER QRL R++E R + E T+RH +E K
Sbjct: 423 QQLRREQEEERHEQKH-EQERREQRLKREQEERRDWLKREEETERHEQERRK 473
Score = 33.5 bits (75), Expect = 0.040
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 10 DRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKT 69
+ ++ P R + ++Q R + E Q+E QQ+Q R+ L + +
Sbjct: 257 EEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERRE 316
Query: 70 HTHTGMHTQTHRER--ERNTQRLR--DRERRENHTHTETHTQRHTEE 112
Q RE+ ER Q+LR ERRE E +R ++
Sbjct: 317 QQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQ 363
Score = 30.8 bits (68), Expect = 0.26
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Query: 22 RAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHR 81
+ + + QQQ+R + Q E +KE ++R+ +RK + K + +
Sbjct: 221 KGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKE--------EEKLQEEEPQRQRELQ 272
Query: 82 ERERNTQRLRDRERRENHTHTETHTQRHTEE 112
E E ++L +E R E QR E
Sbjct: 273 EEEEQLRKLERQELRRERQEEEQQQQRLRRE 303
Score = 30.4 bits (67), Expect = 0.34
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPK 68
RDR++ PG R + +Q++ L G Q+E Q+ +QR R LW +
Sbjct: 125 RDRQLEEE-PGQRRRQKRQEQERELAEG-EEQSEKQERLEQRDRQRRDEELWRQRQEWQE 182
Query: 69 THTHTGMHTQTHRERERNTQRLRDRER 95
Q + T+ D E+
Sbjct: 183 REERRAEEEQLQSCKGHETEEFPDEEQ 209
Score = 30.0 bits (66), Expect = 0.45
Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 26 DPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERER 85
+ QQQ+RL + + ++E +++Q R+ Q + + + RE+
Sbjct: 293 EEQQQQRLRREQQLRRKQEEERREQQEERREQ---QERREQQEERREQQLRREQEERREQ 349
Query: 86 NTQRLRDRERRENHTHTETHTQRHTEE 112
+R ++ ERRE E +R ++
Sbjct: 350 QLRREQEEERREQQLRREQEEERREQQ 376
Score = 29.3 bits (64), Expect = 0.76
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Query: 4 RLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTG 63
R +L R+R+ + R + + Q +++ Q E ++E Q+R+ +
Sbjct: 283 RQELRRERQEEEQQQ--QRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLR 340
Query: 64 HLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTE 111
Q + Q RE+ +R ++ ERRE E +R +
Sbjct: 341 REQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQ 388
Score = 28.9 bits (63), Expect = 1.00
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 19 GLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQ 78
G R + ++++R + L Q E + QQ++ R+ W +
Sbjct: 728 GQRRRQEQEEKRRRRESELQWQEEERAHRQQQEEEQRRDFTWQWQ-----------AEEK 776
Query: 79 THRERERNTQRLRDRERRENHTHTETHTQR 108
+ R R+R + R RE+RE E QR
Sbjct: 777 SERGRQRLSARPPLREQRERQLRAEERQQR 806
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 35.0 bits (79), Expect = 0.014
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 40 QAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENH 99
Q E ++ Q+ R+ + +T T +ERER T R RDR+R+
Sbjct: 156 QTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRK--- 212
Query: 100 THTETHTQRHTE 111
T+T QR T+
Sbjct: 213 --TQTERQRETD 222
Score = 31.6 bits (70), Expect = 0.15
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 23 AKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRE 82
A D +Q++R T+ E ++ ++ + RK + + K T+ R+
Sbjct: 72 ADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREK-------QTEIERD 124
Query: 83 RERNTQRLRDRER-----RENHTHTETHTQRHTEE 112
RER Q+ R+RER RE E +R TE+
Sbjct: 125 REREKQKGRERERDRGRERERDRDREKERERQTEK 159
Score = 30.4 bits (67), Expect = 0.34
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 39 TQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRE 97
T+ E +++ + + RKT + T + R+R+R +R R+R+R+E
Sbjct: 195 TEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKE 253
Score = 28.5 bits (62), Expect = 1.3
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 42 ETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRE---RREN 98
E +++ + + R+T G + +T + +ERE R R R+ RE
Sbjct: 142 ERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERER 201
Query: 99 HTHTETHTQRHTE 111
T E QR T+
Sbjct: 202 QTDRERDRQRKTQ 214
Score = 28.1 bits (61), Expect = 1.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 82 ERERNTQRLRDRERRENHTHTETHTQRHTEEALK 115
E+ER+ R RDRERR T + R + ++
Sbjct: 89 EKERDRDRKRDRERRRKEKETNRNRDREKQTEIE 122
Score = 28.1 bits (61), Expect = 1.7
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 2/109 (1%)
Query: 9 RDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPK 68
R+R+ G + + ++ + + E ++ Q+ R+ Q K
Sbjct: 153 RERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRK 212
Query: 69 THTHTGMHTQTHRERE--RNTQRLRDRERRENHTHTETHTQRHTEEALK 115
T T T ERE R +R RDR+R + + +E K
Sbjct: 213 TQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKK 261
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 33.5 bits (75), Expect = 0.040
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 4 RLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTG 63
RL+ L+ R L + K + +Q++ L AE ++ A+QR+ R+
Sbjct: 647 RLRWLQQEEEERRHQELLQKKKEEEQER-----LRKAAEAKRLAEQREQERRE------- 694
Query: 64 HLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALK 115
Q RE+ER Q R++ERRE +R +E L+
Sbjct: 695 --------------QERREQERREQERREQERREQERQLAEQERRREQERLQ 732
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 33.5 bits (75), Expect = 0.040
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 4 RLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTG 63
RL+ L+ R L + K + +Q++ L AE ++ A+QR+ R+
Sbjct: 643 RLRWLQQEEEERRHQELLQKKKEEEQER-----LRKAAEAKRLAEQREQERRE------- 690
Query: 64 HLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALK 115
Q RE+ER Q R++ERRE +R +E L+
Sbjct: 691 --------------QERREQERREQERREQERREQERQLAEQERRREQERLQ 728
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.125 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,274,876
Number of Sequences: 37866
Number of extensions: 198688
Number of successful extensions: 2512
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 1426
Number of HSP's gapped (non-prelim): 701
length of query: 122
length of database: 18,247,518
effective HSP length: 89
effective length of query: 33
effective length of database: 14,877,444
effective search space: 490955652
effective search space used: 490955652
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.