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Search of human proteins with 239749508
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
(190 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 400 e-112
gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ... 400 e-112
gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 397 e-111
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 64 6e-11
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 64 6e-11
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 64 6e-11
gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] 60 9e-10
gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] 60 9e-10
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] 60 1e-09
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] 56 2e-08
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 48 6e-06
gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Ho... 47 8e-06
gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Ho... 47 8e-06
gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Ho... 47 8e-06
gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] 44 6e-05
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 43 1e-04
gi|9966907 ARS component B precursor [Homo sapiens] 43 1e-04
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens] 37 0.013
gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo ... 37 0.013
gi|169212026 PREDICTED: keratin associated protein [Homo sapiens] 35 0.030
gi|63053512 keratin associated protein 10-1 [Homo sapiens] 35 0.051
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 34 0.066
gi|30794264 glycosylphosphatidylinositol anchored high density l... 34 0.087
gi|157785645 SPEG complex locus [Homo sapiens] 33 0.11
gi|187829185 CD59 antigen preproprotein [Homo sapiens] 33 0.15
gi|187829183 CD59 antigen preproprotein [Homo sapiens] 33 0.15
gi|10835165 CD59 antigen preproprotein [Homo sapiens] 33 0.15
gi|42716299 CD59 antigen preproprotein [Homo sapiens] 33 0.15
gi|187829070 CD59 antigen preproprotein [Homo sapiens] 33 0.15
gi|42761474 CD59 antigen preproprotein [Homo sapiens] 33 0.15
>gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 400 bits (1027), Expect = e-112
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMK 60
MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMK
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMK 60
Query: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIA 120
SCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIA
Sbjct: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIA 120
Query: 121 DGMLQRGRLLQDQYLQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQPYVSGGGT 180
DGMLQRGRLLQDQYLQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQPYVSGGGT
Sbjct: 121 DGMLQRGRLLQDQYLQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQPYVSGGGT 180
Query: 181 GLLRPPWTGL 190
GLLRPPWTGL
Sbjct: 181 GLLRPPWTGL 190
>gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo
sapiens]
Length = 190
Score = 400 bits (1027), Expect = e-112
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMK 60
MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMK
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMK 60
Query: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIA 120
SCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIA
Sbjct: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIA 120
Query: 121 DGMLQRGRLLQDQYLQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQPYVSGGGT 180
DGMLQRGRLLQDQYLQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQPYVSGGGT
Sbjct: 121 DGMLQRGRLLQDQYLQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQPYVSGGGT 180
Query: 181 GLLRPPWTGL 190
GLLRPPWTGL
Sbjct: 181 GLLRPPWTGL 190
>gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 397 bits (1020), Expect = e-111
Identities = 189/190 (99%), Positives = 189/190 (99%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMK 60
MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMK
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMK 60
Query: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIA 120
SCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIA
Sbjct: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIA 120
Query: 121 DGMLQRGRLLQDQYLQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQPYVSGGGT 180
DGM QRGRLLQDQYLQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQPYVSGGGT
Sbjct: 121 DGMPQRGRLLQDQYLQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQPYVSGGGT 180
Query: 181 GLLRPPWTGL 190
GLLRPPWTGL
Sbjct: 181 GLLRPPWTGL 190
>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 64.3 bits (155), Expect = 6e-11
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCC-GHEHCESLVECAPTDKYCVITRA-TSPGGILV 58
M LL L+L+ + LAQAL CHVC ++C + + C YC+ TR +P + V
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
Query: 59 MKSCSPTCPNSTVSSDSR-ALSVSCCQGSQCNRSAAAGLVGSPGTL-WASIAASQLWALL 116
KSC P C + S+ A + SCCQ CN + A +P TL A I + LW LL
Sbjct: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLA----TPATLALAPILLATLWGLL 116
>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 64.3 bits (155), Expect = 6e-11
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCC-GHEHCESLVECAPTDKYCVITRA-TSPGGILV 58
M LL L+L+ + LAQAL CHVC ++C + + C YC+ TR +P + V
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
Query: 59 MKSCSPTCPNSTVSSDSR-ALSVSCCQGSQCNRSAAAGLVGSPGTL-WASIAASQLWALL 116
KSC P C + S+ A + SCCQ CN + A +P TL A I + LW LL
Sbjct: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLA----TPATLALAPILLATLWGLL 116
>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 64.3 bits (155), Expect = 6e-11
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCC-GHEHCESLVECAPTDKYCVITRA-TSPGGILV 58
M LL L+L+ + LAQAL CHVC ++C + + C YC+ TR +P + V
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYYTPTRMKV 60
Query: 59 MKSCSPTCPNSTVSSDSR-ALSVSCCQGSQCNRSAAAGLVGSPGTL-WASIAASQLWALL 116
KSC P C + S+ A + SCCQ CN + A +P TL A I + LW LL
Sbjct: 61 SKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLA----TPATLALAPILLATLWGLL 116
>gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 60.5 bits (145), Expect = 9e-10
Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHE---HCESLVECAPTDKYCVITRATSPGGIL 57
M++ L +LL A + A +L C C + +C C+ D YCV A++ G L
Sbjct: 1 MKIFLPVLLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNL 60
Query: 58 VM------KSCSPTCP-NSTVSSDSRALSVSCCQGSQCNRSAA-AGLVGSPGTLWASIAA 109
V K+CSP CP V+ ++ +SCCQ CN SAA GL S L A +
Sbjct: 61 VTFGHSLSKTCSPACPIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGLLL 120
Query: 110 SQLWALLQ 117
S L ALL+
Sbjct: 121 SLLPALLR 128
>gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 60.5 bits (145), Expect = 9e-10
Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHE---HCESLVECAPTDKYCVITRATSPGGIL 57
M++ L +LL A + A +L C C + +C C+ D YCV A++ G L
Sbjct: 1 MKIFLPVLLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNL 60
Query: 58 VM------KSCSPTCP-NSTVSSDSRALSVSCCQGSQCNRSAA-AGLVGSPGTLWASIAA 109
V K+CSP CP V+ ++ +SCCQ CN SAA GL S L A +
Sbjct: 61 VTFGHSLSKTCSPACPIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGLLL 120
Query: 110 SQLWALLQ 117
S L ALL+
Sbjct: 121 SLLPALLR 128
>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
Length = 128
Score = 59.7 bits (143), Expect = 1e-09
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSP-GGILVM 59
MR L+LL AV A L CHVC +C+ V C + ++C T P G LV
Sbjct: 1 MRTALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNTVEPLRGNLVK 60
Query: 60 KSCSPTC-PNSTVSS--DSRALSVSCCQGSQCN 89
K C+ +C P+ T+ S S CCQ CN
Sbjct: 61 KDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCN 93
>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
Length = 125
Score = 56.2 bits (134), Expect = 2e-08
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 2 RLLLVLLLLAAVCAALAQALHCHVC---CGHEHCESLVECAPTDKYCVITRATSP----- 53
RL L+ L+LAA C LA AL C+VC G C ++ C + C T +
Sbjct: 5 RLALLALVLAA-CGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
Query: 54 -GGILVMKSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGL 96
G V KSC+ C S V + L VSCC CN A L
Sbjct: 64 QGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVDGAPAL 107
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 47.8 bits (112), Expect = 6e-06
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 8 LLLAAVCA---ALAQALHCHVCCGHEHCESLVECAPTDKYCVITR----ATSPGGILVMK 60
LLLAAV + A A+A+ CH C G C C +CV T + + LV K
Sbjct: 7 LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
Query: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCN 89
C CP+ +S++CCQ S CN
Sbjct: 67 MCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
>gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 47.4 bits (111), Expect = 8e-06
Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCC---GHEHCESLVECAPTDKYCVITRATSPGGIL 57
M+ L + LL +C+A A L C C HC +C P+D C R T P
Sbjct: 27 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPK-QCQPSDTVCASVRITDPSSSR 85
Query: 58 ----VMKSCSPTCP-----------NSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSP-- 100
V K C+ +C ++S + V CC+ CN +A AG SP
Sbjct: 86 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAG--HSPWA 143
Query: 101 --GTLWASIAASQLWA 114
G L S+ + LWA
Sbjct: 144 LAGGLLLSLGPALLWA 159
>gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Homo
sapiens]
Length = 140
Score = 47.4 bits (111), Expect = 8e-06
Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCC---GHEHCESLVECAPTDKYCVITRATSPGGIL 57
M+ L + LL +C+A A L C C HC +C P+D C R T P
Sbjct: 6 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPK-QCQPSDTVCASVRITDPSSSR 64
Query: 58 ----VMKSCSPTCP-----------NSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSP-- 100
V K C+ +C ++S + V CC+ CN +A AG SP
Sbjct: 65 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAG--HSPWA 122
Query: 101 --GTLWASIAASQLWA 114
G L S+ + LWA
Sbjct: 123 LAGGLLLSLGPALLWA 138
>gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 47.4 bits (111), Expect = 8e-06
Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCC---GHEHCESLVECAPTDKYCVITRATSPGGIL 57
M+ L + LL +C+A A L C C HC +C P+D C R T P
Sbjct: 27 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPK-QCQPSDTVCASVRITDPSSSR 85
Query: 58 ----VMKSCSPTCP-----------NSTVSSDSRALSVSCCQGSQCNRSAAAGLVGSP-- 100
V K C+ +C ++S + V CC+ CN +A AG SP
Sbjct: 86 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAG--HSPWA 143
Query: 101 --GTLWASIAASQLWA 114
G L S+ + LWA
Sbjct: 144 LAGGLLLSLGPALLWA 159
>gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]
Length = 131
Score = 44.3 bits (103), Expect = 6e-05
Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 40/129 (31%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVCCGH-EHCESLVECAPTDKYCVITRATSPGGI--- 56
M LL L+L+ + LAQAL CHVC + ++C + + C YC+ TR ++ I
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTSAAEAIWCH 60
Query: 57 ------------------------------------LVMKSCSPTCPNSTVSSDSRALSV 80
LV K C CP+ +S+
Sbjct: 61 QCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKMCHIGCPDIPSLGLGPYVSI 120
Query: 81 SCCQGSQCN 89
+CCQ S CN
Sbjct: 121 ACCQTSLCN 129
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 43.1 bits (100), Expect = 1e-04
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 1 MRLLLVLLLLAAVCAALAQALHCHVC---CGHEHCESLVECAPTDKYCVITRATSPGGIL 57
M+ +L+ LL+A + AL C+ C +E C + C + C R + G +
Sbjct: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
Query: 58 VM-KSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGL 96
V+ K CS C + + +++CC CN S A L
Sbjct: 61 VISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHAL 100
>gi|9966907 ARS component B precursor [Homo sapiens]
Length = 103
Score = 43.1 bits (100), Expect = 1e-04
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 2 RLLLVLLLLAAVCAALAQALHCHVC---CGHEHCESLVECAPTDKYCVITRATSPGGI-- 56
R + LLL+AA +AL C+ C C ++ C P D C+ T T
Sbjct: 4 RWAVQLLLVAAWSMGCGEALKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPF 63
Query: 57 ----LVMKSCSPTCPNSTVSSDSRALSVSCCQGSQCN 89
+V +SCS +C + S A + CC CN
Sbjct: 64 NQSPVVTRSCSSSCVATDPDSIGAAHLIFCCFRDLCN 100
>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 36.6 bits (83), Expect = 0.013
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 25 VCCGHEHCESLVECAPTDKYCVITRATSPGGILVMKSC-SPTCPNSTVSSDSRALSVSCC 83
V C C+ +V C P+ V T +S ++ SC P CP T S S +V CC
Sbjct: 192 VLCKSSCCQPVV-CEPSCCSAVCTLPSSCQPVVCEPSCCQPVCPTPTCSVTSSCQAV-CC 249
Query: 84 QGSQCNRSAAAGLVGSPGTLWASI 107
S C S + + P T A +
Sbjct: 250 DPSPCEPSCSESSICQPATCVALV 273
>gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo
sapiens]
Length = 517
Score = 36.6 bits (83), Expect = 0.013
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 25 VCCGHEHCESLVECAPTDKYCVITRATSPGGILVMKSC-SPTCPNSTVSSDSRALSVSCC 83
V C C+ +V C P+ V T +S ++ SC P CP T S S +V CC
Sbjct: 192 VLCKSSCCQPVV-CEPSCCSAVCTLPSSCQPVVCEPSCCQPVCPTPTCSVTSSCQAV-CC 249
Query: 84 QGSQCNRSAAAGLVGSPGTLWASI 107
S C S + + P T A +
Sbjct: 250 DPSPCEPSCSESSICQPATCVALV 273
>gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 35.4 bits (80), Expect = 0.030
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 25 VCCGHEHCESLVECAPTDKYCVITRATSPGGILVMKSC-SPTCPNSTVSSDSRALSVSCC 83
V C C+ +V C P+ V T +S ++ SC P CP T S S +V CC
Sbjct: 192 VLCKSSCCQPVV-CEPSCCSAVCTLPSSCQPVVCEPSCCQPVCPTPTCSVTSSCQAV-CC 249
Query: 84 QGSQCNRSAAAGLVGSPGTLWASI 107
S C + + + P T A +
Sbjct: 250 DPSPCEPTCSESSICQPATCVALV 273
>gi|63053512 keratin associated protein 10-1 [Homo sapiens]
Length = 282
Score = 34.7 bits (78), Expect = 0.051
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 11 AAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMKSCSPTC-PNS 69
++ C+ Q C C HC +L CAP +T +P + C C P+
Sbjct: 10 SSACSDSWQVDACPESCCEPHCCALSCCAPAP---CLTLVCTPVSRVSSPCCQAACEPSP 66
Query: 70 TVSSDSRALSVSCCQGSQC 88
S + + + SCCQ S C
Sbjct: 67 CQSGCTSSCTPSCCQQSSC 85
Score = 30.8 bits (68), Expect = 0.73
Identities = 25/95 (26%), Positives = 32/95 (33%), Gaps = 14/95 (14%)
Query: 10 LAAVCAALAQALH--CHVCCGHEHCESLVECAPTDKYC--------VITRATSPGGILVM 59
L VC +++ C C C+S + T C T + V
Sbjct: 43 LTLVCTPVSRVSSPCCQAACEPSPCQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVP 102
Query: 60 KSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAA 94
C P C T S DS SCCQ S C + A
Sbjct: 103 VCCKPVCCLPTCSKDSS----SCCQQSSCQPTCCA 133
Score = 29.6 bits (65), Expect = 1.6
Identities = 23/84 (27%), Positives = 29/84 (34%), Gaps = 22/84 (26%)
Query: 26 CCGHEHCESL----VECAPTDKYCVITRATSPGGILVMKSCSPTCPNSTVSSDSRALSV- 80
CC C+ V C P C+ T + SC PTC S+ S S + V
Sbjct: 89 CCTSSPCQQACCVPVCCKPV--CCLPTCSKDSSSCCQQSSCQPTCCASSSSQQSCCVPVC 146
Query: 81 ---------------SCCQGSQCN 89
SCCQ S C+
Sbjct: 147 CKPVCYVPTCSEDSSSCCQQSSCH 170
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 34.3 bits (77), Expect = 0.066
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 10/84 (11%)
Query: 11 AAVCAALAQALHCHVCCGHEHCESLVECAPTDKYCVITRATSPGGILVMKSCSPTCPNST 70
A++C ++C C CE+ + C+P D CV G +CS CP T
Sbjct: 435 ASLCPPDTYGVNCSARCS---CENAIACSPIDGECVCKEGWQRG------NCSVPCPPGT 485
Query: 71 VSSDSRALSVSCCQGSQCNRSAAA 94
A S C + C+ A
Sbjct: 486 WGFSCNA-SCQCAHEAVCSPQTGA 508
>gi|30794264 glycosylphosphatidylinositol anchored high density
lipoprotein binding protein 1 [Homo sapiens]
Length = 184
Score = 33.9 bits (76), Expect = 0.087
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Query: 7 LLLLAAVCAALAQALHCHVC--CGH-EHCESLVECAPTDKYCVITRATSPGGILVMKSCS 63
+LL C +L + C++ C H + C +L+ T+ + T +T C+
Sbjct: 61 VLLRCYTCKSLPRDERCNLTQNCSHGQTCTTLIAHGNTESGLLTTHSTW---------CT 111
Query: 64 PTCPNSTVSSDSRALSVSCCQGSQCN 89
+C T + + ++++CCQ S CN
Sbjct: 112 DSCQPITKTVEGTQVTMTCCQSSLCN 137
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 33.5 bits (75), Expect = 0.11
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 75 SRALSVSCCQGSQCNRSAAAGLVGSPGTLWASIAASQLWALLQGIADGMLQRGRLLQDQY 134
SRA V GS+ + S A+ L GS +L+ A S I + Q G ++
Sbjct: 234 SRANLVGASWGSEDSLSVASDLYGSAFSLYRGRALS--------IHVSVPQSGLRREEPD 285
Query: 135 LQDPLLGSWDPLPAATPPQAHILCPWSSALQGAPTPPQP 173
LQ L PA PP L P S G +PP P
Sbjct: 286 LQPQLASEAPRRPAQPPPSKSALLPPPSPRVGKRSPPGP 324
>gi|187829185 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 33.1 bits (74), Expect = 0.15
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 3 LLLVLLLLAAVCAALAQALHCHVCCGHE-HCESLVECAPTDKYCVITRATSPGGILVMKS 61
+L LLL+ AV +L C+ C C++ V C+ C+IT+A G+ V
Sbjct: 8 VLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA----GLQVYNK 63
Query: 62 C--SPTCPNSTVSSDSR--ALSVSCCQGSQCN 89
C C + V++ R L+ CC+ CN
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|187829183 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 33.1 bits (74), Expect = 0.15
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 3 LLLVLLLLAAVCAALAQALHCHVCCGHE-HCESLVECAPTDKYCVITRATSPGGILVMKS 61
+L LLL+ AV +L C+ C C++ V C+ C+IT+A G+ V
Sbjct: 8 VLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA----GLQVYNK 63
Query: 62 C--SPTCPNSTVSSDSR--ALSVSCCQGSQCN 89
C C + V++ R L+ CC+ CN
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|10835165 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 33.1 bits (74), Expect = 0.15
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 3 LLLVLLLLAAVCAALAQALHCHVCCGHE-HCESLVECAPTDKYCVITRATSPGGILVMKS 61
+L LLL+ AV +L C+ C C++ V C+ C+IT+A G+ V
Sbjct: 8 VLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA----GLQVYNK 63
Query: 62 C--SPTCPNSTVSSDSR--ALSVSCCQGSQCN 89
C C + V++ R L+ CC+ CN
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|42716299 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 33.1 bits (74), Expect = 0.15
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 3 LLLVLLLLAAVCAALAQALHCHVCCGHE-HCESLVECAPTDKYCVITRATSPGGILVMKS 61
+L LLL+ AV +L C+ C C++ V C+ C+IT+A G+ V
Sbjct: 8 VLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA----GLQVYNK 63
Query: 62 C--SPTCPNSTVSSDSR--ALSVSCCQGSQCN 89
C C + V++ R L+ CC+ CN
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|187829070 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 33.1 bits (74), Expect = 0.15
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 3 LLLVLLLLAAVCAALAQALHCHVCCGHE-HCESLVECAPTDKYCVITRATSPGGILVMKS 61
+L LLL+ AV +L C+ C C++ V C+ C+IT+A G+ V
Sbjct: 8 VLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA----GLQVYNK 63
Query: 62 C--SPTCPNSTVSSDSR--ALSVSCCQGSQCN 89
C C + V++ R L+ CC+ CN
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|42761474 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 33.1 bits (74), Expect = 0.15
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 3 LLLVLLLLAAVCAALAQALHCHVCCGHE-HCESLVECAPTDKYCVITRATSPGGILVMKS 61
+L LLL+ AV +L C+ C C++ V C+ C+IT+A G+ V
Sbjct: 8 VLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKA----GLQVYNK 63
Query: 62 C--SPTCPNSTVSSDSR--ALSVSCCQGSQCN 89
C C + V++ R L+ CC+ CN
Sbjct: 64 CWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,342,957
Number of Sequences: 37866
Number of extensions: 491943
Number of successful extensions: 2442
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 2269
Number of HSP's gapped (non-prelim): 254
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.