Guide to the Human Genome
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Name: CD59 Sequence: fasta or formatted (128aa) NCBI GI: 42761474
Description:

CD59 antigen preproprotein

Referenced in:

Complement
Additional Genes in Development

Other entries for this name:
alt mRNA [128aa] CD59 antigen preproprotein
alt mRNA [128aa] CD59 antigen preproprotein
alt mRNA [128aa] CD59 antigen preproprotein
alt mRNA [128aa] CD59 antigen preproprotein
alt mRNA [128aa] CD59 antigen preproprotein
alt mRNA [128aa] CD59 antigen preproprotein
alt mRNA [128aa] CD59 antigen preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2          8           3
 C cysteine            8.6         11           2
 D aspartate           3.9          5           1
 E glutamate           4.7          6           1
 F phenylalanine       5.5          7           1
 G glycine             6.2          8           2
 H histidine           3.1          4           1
 I isoleucine          1.6          2           1
 K lysine              5.5          7           2
 L leucine            14.1         18           3
 M methionine          0.8          1           1
 N asparagine          7.8         10           1
 P proline             3.1          4           1
 Q glutamine           3.1          4           1
 R arginine            1.6          2           1
 S serine              6.2          8           2
 T threonine           7.0          9           2
 V valine              6.2          8           1
 W tryptophan          1.6          2           1
 Y tyrosine            3.1          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD59 antigen preproprotein 
CD59                  1.000   CD59 antigen preproprotein 
CD59                  1.000   CD59 antigen preproprotein 
CD59                  1.000   CD59 antigen preproprotein 
CD59                  1.000   CD59 antigen preproprotein 
CD59                  1.000   CD59 antigen preproprotein 
CD59                  1.000   CD59 antigen preproprotein 
CD59                  1.000   CD59 antigen preproprotein 
SLURP1                0.063   ARS component B precursor 
LYNX1                 0.055   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.055   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.055   Ly-6 neurotoxin-like protein 1 isoform c 
LYPD2                 0.047   LY6/PLAUR domain containing 2 
GPIHBP1               0.047   glycosylphosphatidylinositol anchored high density l...
LOC100292543          0.032   PREDICTED: similar to RIKEN cDNA D730001G18 
LOC100288207          0.032   PREDICTED: similar to RIKEN cDNA D730001G18 
LOC100288207          0.032   PREDICTED: hypothetical protein XP_002342921 
LY6D                  0.028   lymphocyte antigen 6 complex, locus D 
PSCA                  0.024   prostate stem cell antigen preproprotein 
LY6G6C                0.024   lymphocyte antigen 6 complex G6C 
PATE3                 0.020   prostate and testis expressed 3 
LY6G6D                0.012   lymphocyte antigen 6 complex G6D 
F2RL2                 0.012   coagulation factor II (thrombin) receptor-like 2 prec...
NARG1L                0.012   NMDA receptor regulated 1-like protein isoform 1 [Ho...
HERC6                 0.012   hect domain and RLD 6 
WDR72                 0.012   WD repeat domain 72 
FLRT2                 0.012   fibronectin leucine rich transmembrane protein 2 [Hom...
TLR7                  0.008   toll-like receptor 7 
CCPG1                 0.008   cell cycle progression 1 isoform 2 
CCPG1                 0.008   cell cycle progression 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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