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Search of human proteins with 117938254
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117938254 BCL2-associated transcription factor 1 isoform 3
[Homo sapiens]
(747 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 1513 0.0
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 838 0.0
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 677 0.0
gi|169218320 PREDICTED: similar to BCL2-associated transcription... 675 0.0
gi|239756568 PREDICTED: similar to BCL2-associated transcription... 664 0.0
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 367 e-101
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 109 8e-24
gi|115511057 hypothetical protein LOC256643 [Homo sapiens] 103 4e-22
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 96 9e-20
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 94 6e-19
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 89 1e-17
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 89 1e-17
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 89 2e-17
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 86 2e-16
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 86 2e-16
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 81 4e-15
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 80 5e-15
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 80 9e-15
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 80 9e-15
gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens] 79 1e-14
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 79 2e-14
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 76 1e-13
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 76 1e-13
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 76 1e-13
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 73 8e-13
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 73 8e-13
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 73 1e-12
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 72 2e-12
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 71 3e-12
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens] 71 4e-12
>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
sapiens]
Length = 747
Score = 1513 bits (3916), Expect = 0.0
Identities = 747/747 (100%), Positives = 747/747 (100%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD
Sbjct: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV
Sbjct: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK
Sbjct: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS
Sbjct: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
Query: 241 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 300
SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS
Sbjct: 241 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 300
Query: 301 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPL 360
PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPL
Sbjct: 301 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPL 360
Query: 361 RIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIK 420
RIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIK
Sbjct: 361 RIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIK 420
Query: 421 LPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHR 480
LPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHR
Sbjct: 421 LPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHR 480
Query: 481 RIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKG 540
RIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKG
Sbjct: 481 RIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKG 540
Query: 541 SRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER 600
SRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER
Sbjct: 541 SRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER 600
Query: 601 EEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEE 660
EEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEE
Sbjct: 601 EEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEE 660
Query: 661 EWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDKYQ 720
EWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDKYQ
Sbjct: 661 EWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDKYQ 720
Query: 721 GDGIVEDEEETMENNEEKKDRRKEEKE 747
GDGIVEDEEETMENNEEKKDRRKEEKE
Sbjct: 721 GDGIVEDEEETMENNEEKKDRRKEEKE 747
>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
sapiens]
Length = 920
Score = 838 bits (2165), Expect = 0.0
Identities = 467/740 (63%), Positives = 515/740 (69%), Gaps = 61/740 (8%)
Query: 13 SKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPYG 72
S+S S S + S HS K S S S +S RS
Sbjct: 237 SQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERS------------------------ 272
Query: 73 YRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRS 132
G G G RY P+ + RSP + + +P R SR R S
Sbjct: 273 ----GSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAP--------RDESRGRSS 320
Query: 133 YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAE-GEPQEESPLKSKSQEEPKDTF 191
+ + ++ KR +E + + G +++ K K E+ +
Sbjct: 321 FYPDGGDQETAKTGK-------FLKRFTDEESRVFLLDRGNTRDKEASKEKGSEKGRAEG 373
Query: 192 EHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTV 251
E + E++D F+ + G +++S + +S +T
Sbjct: 374 EWEDQEALDYFSDKES-------GKQKFNDSEGDDTEETEDYRQFRKSVLADQGKSFATA 426
Query: 252 HSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAP 311
S +NT + +++ + S G+ S + +N + T ++
Sbjct: 427 -SHRNTEEE---GLKYKSKVSLKGN--RESDGFREEKNYKLKETGYVVERPSTTKDKHKE 480
Query: 312 RDESRGRSSFYPDGGDQETAKTGK----FLKSPPLHKNLDAREKSTFREESPLRIKMIAS 367
D++ R + + E K+ K F SPPLHKNLDAREKSTFREESPLRIKMIAS
Sbjct: 481 EDKNSERITVKKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIAS 540
Query: 368 DSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKS 427
DSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKS
Sbjct: 541 DSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKS 600
Query: 428 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 487
TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS
Sbjct: 601 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 660
Query: 488 TLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGS 547
TLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGS
Sbjct: 661 TLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGS 720
Query: 548 RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTH 607
RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTH
Sbjct: 721 RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTH 780
Query: 608 HEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYT 667
HEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYT
Sbjct: 781 HEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYT 840
Query: 668 PKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDKYQGDGIVED 727
PKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDKYQGDGIVED
Sbjct: 841 PKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDKYQGDGIVED 900
Query: 728 EEETMENNEEKKDRRKEEKE 747
EEETMENNEEKKDRRKEEKE
Sbjct: 901 EEETMENNEEKKDRRKEEKE 920
Score = 686 bits (1769), Expect = 0.0
Identities = 338/338 (100%), Positives = 338/338 (100%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD
Sbjct: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV
Sbjct: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK
Sbjct: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS
Sbjct: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
Query: 241 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 300
SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS
Sbjct: 241 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 300
Query: 301 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK 338
PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK
Sbjct: 301 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK 338
Score = 38.1 bits (87), Expect = 0.030
Identities = 42/197 (21%), Positives = 75/197 (38%), Gaps = 26/197 (13%)
Query: 564 KDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFK---------THHEMKEYS 614
+ +S+ + SRS SSS S S SR+++ S + R + + ++Y
Sbjct: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
Query: 615 GFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEY--TPKSKK 672
G+ RP G RGR RG + G + + W+ + +P+ +
Sbjct: 63 NNRGMRRPYGY------RGRGRGYYQG-------GGGRYHRGGYRPVWNRRHSRSPRRGR 109
Query: 673 YFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSP--KWTHDKYQGDGIVEDEEE 730
+ V R R R +++ R + SSP K K +G + ++
Sbjct: 110 SRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKA 169
Query: 731 TMENNEEKKDRRKEEKE 747
E EE + K ++E
Sbjct: 170 EGEPQEESPLKSKSQEE 186
Score = 38.1 bits (87), Expect = 0.030
Identities = 42/197 (21%), Positives = 75/197 (38%), Gaps = 26/197 (13%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
+ +S+ + SRS SSS S S SR+++ S + R + + ++Y
Sbjct: 737 KDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFK---------THHEMKEYS 787
Query: 63 NNRGMRRPYGY------RGRGRGYYQG-------GGGRYHRGGYRPVWNRRHSRSPRRGR 109
G+ RP G RGR RG + G + + W+ + +P+ +
Sbjct: 788 GFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEY--TPKSKK 845
Query: 110 SRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKA 169
+ V R R R +++ R + SSP K K +G + ++
Sbjct: 846 YFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSP--KWTHDKYQGDGIVEDEEE 903
Query: 170 EGEPQEESPLKSKSQEE 186
E EE + K ++E
Sbjct: 904 TMENNEEKKDRRKEEKE 920
Score = 33.1 bits (74), Expect = 0.97
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 460 TSYQKATEEHSTRQKSPEIHRRIDISP-STLRKHTRLAGEERVFKEENQKGDKKLRCDSA 518
+S K+ + S+R +S R+ S S R ++R +R++ + ++ + R
Sbjct: 10 SSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNR---- 65
Query: 519 DLRHDIDRRRKERSKERG--------------DSKGSRESSGSRKQEKTPKDYKEYKSYK 564
+R R + R +G + + SR R + ++PK + S +
Sbjct: 66 GMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR-RSVSSQR 124
Query: 565 DDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKT---HHEMKEYSGFAGVSR 621
S+ +R SRS SS+S SS + SK+ +E +T E +E S S+
Sbjct: 125 SRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQ 184
Query: 622 --PRGTF 626
P+ TF
Sbjct: 185 EEPKDTF 191
Score = 33.1 bits (74), Expect = 0.97
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 10 SSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNR---- 65
+S K+ + S+R +S R+ S S R ++R +R++ + ++ + R
Sbjct: 633 TSYQKATEEHSTRQKSPEIHRRIDISP-STLRKHTRLAGEERVFKEENQKGDKKLRCDSA 691
Query: 66 GMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR-RSVSSQR 124
+R R + R +G + + SR R + ++PK + S +
Sbjct: 692 DLRHDIDRRRKERSKERG--------------DSKGSRESSGSRKQEKTPKDYKEYKSYK 737
Query: 125 SRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQ 184
S+ +R SRS SS+S SS + SK+ +E +T E +E S S+
Sbjct: 738 DDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKT---HHEMKEYSGFAGVSR 794
Query: 185 EEPKDTF 191
P+ TF
Sbjct: 795 --PRGTF 799
>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
sapiens]
Length = 869
Score = 677 bits (1748), Expect = 0.0
Identities = 336/338 (99%), Positives = 336/338 (99%), Gaps = 2/338 (0%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRY RSRSRTYSRSRSRDRMYSRDYRRD
Sbjct: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRY--RSRSRTYSRSRSRDRMYSRDYRRD 58
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV
Sbjct: 59 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 118
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK
Sbjct: 119 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 178
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS
Sbjct: 179 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 238
Query: 241 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 300
SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS
Sbjct: 239 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 298
Query: 301 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK 338
PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK
Sbjct: 299 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK 336
Score = 659 bits (1700), Expect = 0.0
Identities = 403/748 (53%), Positives = 452/748 (60%), Gaps = 126/748 (16%)
Query: 13 SKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPYG 72
S+S S S + S HS K S S S +S RS
Sbjct: 235 SQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERS------------------------ 270
Query: 73 YRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRS 132
G G G RY P+ + RSP + + +P R SR R S
Sbjct: 271 ----GSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAP--------RDESRGRSS 318
Query: 133 YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAE-GEPQEESPLKSKSQEEPKDTF 191
+ + ++ KR +E + + G +++ K K E+ +
Sbjct: 319 FYPDGGDQETAKTGK-------FLKRFTDEESRVFLLDRGNTRDKEASKEKGSEKGRAEG 371
Query: 192 EHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTV 251
E + E++D F+ + G +++S + +S +T
Sbjct: 372 EWEDQEALDYFSDKES-------GKQKFNDSEGDDTEETEDYRQFRKSVLADQGKSFATA 424
Query: 252 HSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAP 311
S +NT + +++ + S G+ S + +N + T ++
Sbjct: 425 -SHRNTEEE---GLKYKSKVSLKGN--RESDGFREEKNYKLKETGYVVERPSTTKDKHKE 478
Query: 312 RDESRGRSSFYPDGGDQETAKTGK----FLKSPPLHKNLDAREKSTFREESPLRIKMIAS 367
D++ R + + E K+ K F SPPLHKNLDAREKSTFREESPLRIKMIAS
Sbjct: 479 EDKNSERITVKKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIAS 538
Query: 368 DSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKS 427
DSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKS
Sbjct: 539 DSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKS 598
Query: 428 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 487
TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS
Sbjct: 599 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 658
Query: 488 TLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGS 547
TLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGS
Sbjct: 659 TLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGS 718
Query: 548 RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTH 607
RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTH
Sbjct: 719 RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTH 778
Query: 608 HEMKEYSGFAGVSRPRGTFFRIRG--------RGRARGVFAGTNTGPNNSNTTFQKRPKE 659
HEMKEYSGFAGVSRPRGTF R RGR RG F
Sbjct: 779 HEMKEYSGFAGVSRPRGTFHDDRDDGVDYWAKRGRGRGTF-------------------- 818
Query: 660 EEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDKY 719
+RGR GRFNFKKSGSSPKWTHDKY
Sbjct: 819 ----------------------------QRGR---------GRFNFKKSGSSPKWTHDKY 841
Query: 720 QGDGIVEDEEETMENNEEKKDRRKEEKE 747
QGDGIVEDEEETMENNEEKKDRRKEEKE
Sbjct: 842 QGDGIVEDEEETMENNEEKKDRRKEEKE 869
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 25/111 (22%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
+ +S+ + SRS SSS S S SR+++ S + R + + ++Y
Sbjct: 735 KDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFK---------THHEMKEYS 785
Query: 63 NNRGMRRPYG--------------YRGRGRGYYQGGGGRYH--RGGYRPVW 97
G+ RP G RGRGRG +Q G GR++ + G P W
Sbjct: 786 GFAGVSRPRGTFHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKW 836
Score = 42.0 bits (97), Expect = 0.002
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 26/225 (11%)
Query: 10 SSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNR---- 65
+S K+ + S+R +S R+ S S R ++R +R++ + ++ + R
Sbjct: 631 TSYQKATEEHSTRQKSPEIHRRIDISP-STLRKHTRLAGEERVFKEENQKGDKKLRCDSA 689
Query: 66 GMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR-RSVSSQR 124
+R R + R +G + + SR R + ++PK + S +
Sbjct: 690 DLRHDIDRRRKERSKERG--------------DSKGSRESSGSRKQEKTPKDYKEYKSYK 735
Query: 125 SRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQ 184
S+ +R SRS SS+S SS + SK+ +E +T E +E S S+
Sbjct: 736 DDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKT---HHEMKEYSGFAGVSR 792
Query: 185 EEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSP 229
P+ TF D + +D + K G G + N +S SP
Sbjct: 793 --PRGTFHDDRDDGVDYWAKRGRGRGTFQRGRGRF-NFKKSGSSP 834
Score = 36.2 bits (82), Expect = 0.11
Identities = 41/195 (21%), Positives = 74/195 (37%), Gaps = 24/195 (12%)
Query: 564 KDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER-------EEEFKTHHEMKEYSGF 616
+ +S+ + SRS SSS S S SR+++ + R + + ++Y
Sbjct: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRNN 62
Query: 617 AGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEY--TPKSKKYF 674
G+ RP G RGR RG + G + + W+ + +P+ +
Sbjct: 63 RGMRRPYGY------RGRGRGYYQG-------GGGRYHRGGYRPVWNRRHSRSPRRGRSR 109
Query: 675 LHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSP--KWTHDKYQGDGIVEDEEETM 732
+ V R R R +++ R + SSP K K +G + ++
Sbjct: 110 SRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 169
Query: 733 ENNEEKKDRRKEEKE 747
E EE + K ++E
Sbjct: 170 EPQEESPLKSKSQEE 184
Score = 33.5 bits (75), Expect = 0.74
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 25/186 (13%)
Query: 460 TSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSAD 519
+S K+ + S+R +S H R S R ++R +R++ + ++ + R
Sbjct: 10 SSRSKSRSQSSSRSRSRS-HSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRNNR----G 64
Query: 520 LRHDIDRRRKERSKERG--------------DSKGSRESSGSRKQEKTPKDYKEYKSYKD 565
+R R + R +G + + SR R + ++PK + S +
Sbjct: 65 MRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR-RSVSSQRS 123
Query: 566 DSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKT---HHEMKEYSGFAGVSR- 621
S+ +R SRS SS+S SS + SK+ +E +T E +E S S+
Sbjct: 124 RSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQE 183
Query: 622 -PRGTF 626
P+ TF
Sbjct: 184 EPKDTF 189
Score = 30.4 bits (67), Expect = 6.3
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Query: 631 GRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDD--GVDY--- 685
GR +R + ++ + S ++ + R + Y +S+ Y RD DY
Sbjct: 2 GRSNSR---SHSSRSKSRSQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRD 58
Query: 686 ----------WAKRGRGRGTFQRGRGRFNFKKSGSSPKW 714
+ RGRGRG +Q G GR++ + G P W
Sbjct: 59 YRNNRGMRRPYGYRGRGRGYYQGGGGRYH--RGGYRPVW 95
>gi|169218320 PREDICTED: similar to BCL2-associated transcription
factor 1 isoform 2 [Homo sapiens]
Length = 869
Score = 675 bits (1742), Expect = 0.0
Identities = 335/338 (99%), Positives = 335/338 (99%), Gaps = 2/338 (0%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRY RSRSRTYSRSRSRDRMYSRDYRRD
Sbjct: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRY--RSRSRTYSRSRSRDRMYSRDYRRD 58
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
YRNNR MRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV
Sbjct: 59 YRNNRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 118
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK
Sbjct: 119 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 178
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS
Sbjct: 179 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 238
Query: 241 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 300
SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS
Sbjct: 239 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 298
Query: 301 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK 338
PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK
Sbjct: 299 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK 336
Score = 643 bits (1658), Expect = 0.0
Identities = 397/749 (53%), Positives = 449/749 (59%), Gaps = 128/749 (17%)
Query: 13 SKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPYG 72
S+S S S + S HS K S S S +S RS
Sbjct: 235 SQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERS------------------------ 270
Query: 73 YRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRS 132
G G G RY P+ + RSP + + +P R SR R S
Sbjct: 271 ----GSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAP--------RDESRGRSS 318
Query: 133 YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAE-GEPQEESPLKSKSQEEPKDTF 191
+ + ++ KR +E + + G +++ K K E+ +
Sbjct: 319 FYPDGGDQETAKTGK-------FLKRFTDEESRVFLLDRGNTRDKEASKEKGSEKGRAEG 371
Query: 192 EHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTV 251
E + E++D F+ + G +++S + +S +T
Sbjct: 372 EWEDQEALDYFSDKES-------GKQKFNDSEGDDTEETEDYRQFRKSVLADQGKSFATA 424
Query: 252 HSAKNTPSQHSHSIQHSPERSGSGS-VGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNA 310
S +NT + +++ + S G+ +G ++ ++ R S K ++
Sbjct: 425 -SHRNTEEE---GLKYKSKVSLKGNRESDGFREEKNDKHKETGYVVERPSTTKD---KHK 477
Query: 311 PRDESRGRSSFYPDGGDQETAKTGK----FLKSPPLHKNLDAREKSTFREESPLRIKMIA 366
D++ R + + E K+ K F SPPLHKNLDAREKSTFREESPLRIKMIA
Sbjct: 478 EEDKNSERITVKKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIA 537
Query: 367 SDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASK 426
SDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASK
Sbjct: 538 SDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASK 597
Query: 427 STSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISP 486
STSESFIQHIVSLVHHVKEQYFKSAAMTL+ERFTSYQKATEEHSTRQKSPEIHRRIDISP
Sbjct: 598 STSESFIQHIVSLVHHVKEQYFKSAAMTLSERFTSYQKATEEHSTRQKSPEIHRRIDISP 657
Query: 487 STLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSG 546
STLRK TRLAGEERVFKEENQKGDKKLRCDSADLRHDID RRKERSKERGDSKGSRES G
Sbjct: 658 STLRKDTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDHRRKERSKERGDSKGSRESRG 717
Query: 547 SRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKT 606
SRKQEKTPKDYKEYKSYKDDSKHKREQDHS SSSSSASPSSPSSREEKESKKEREEEFKT
Sbjct: 718 SRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSASPSSPSSREEKESKKEREEEFKT 777
Query: 607 HHEMKEYSGFAGVSRPRGTFFRIRG--------RGRARGVFAGTNTGPNNSNTTFQKRPK 658
HHEMKEYSGFAGVSRPRGTF R RGR RG F
Sbjct: 778 HHEMKEYSGFAGVSRPRGTFHDDRDDGVDYWAKRGRGRGTF------------------- 818
Query: 659 EEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDK 718
+RGR GRFNFKKSGSSPKW HDK
Sbjct: 819 -----------------------------QRGR---------GRFNFKKSGSSPKWNHDK 840
Query: 719 YQGDGIVEDEEETMENNEEKKDRRKEEKE 747
YQGDGIVEDEEETMENNEEKKDR KEEKE
Sbjct: 841 YQGDGIVEDEEETMENNEEKKDRCKEEKE 869
Score = 42.4 bits (98), Expect = 0.002
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 25/112 (22%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
+ +S+ + S S SSS S S SR+++ S + R + ++Y
Sbjct: 735 KDDSKHKREQDHSLSSSSSASPSSPSSREEKESKKEREEEFKTHHEM---------KEYS 785
Query: 63 NNRGMRRPYGY--------------RGRGRGYYQGGGGRYH--RGGYRPVWN 98
G+ RP G RGRGRG +Q G GR++ + G P WN
Sbjct: 786 GFAGVSRPRGTFHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWN 837
Score = 42.0 bits (97), Expect = 0.002
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 28/230 (12%)
Query: 6 SRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNR 65
S +S K+ + S+R +S R+ S S R +R +R++ + ++ + R
Sbjct: 627 SERFTSYQKATEEHSTRQKSPEIHRRIDISP-STLRKDTRLAGEERVFKEENQKGDKKLR 685
Query: 66 ----GMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR-RSV 120
+R +R + R +G + + SR R R + ++PK +
Sbjct: 686 CDSADLRHDIDHRRKERSKERG--------------DSKGSRESRGSRKQEKTPKDYKEY 731
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTK-KAEGEPQEESPL 179
S + S+ +R S S SS S+SP S S ++ +E++ + K E +E S
Sbjct: 732 KSYKDDSKHKREQDHSLS----SSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGF 787
Query: 180 KSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSP 229
S+ P+ TF D + +D + K G G + N +S SP
Sbjct: 788 AGVSR--PRGTFHDDRDDGVDYWAKRGRGRGTFQRGRGRF-NFKKSGSSP 834
Score = 33.9 bits (76), Expect = 0.57
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 24/195 (12%)
Query: 564 KDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER-------EEEFKTHHEMKEYSGF 616
+ +S+ + SRS SSS S S SR+++ + R + + ++Y
Sbjct: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRNN 62
Query: 617 AGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEY--TPKSKKYF 674
+ RP G RGR RG + G + + W+ + +P+ +
Sbjct: 63 RAMRRPYGY------RGRGRGYYQG-------GGGRYHRGGYRPVWNRRHSRSPRRGRSR 109
Query: 675 LHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSP--KWTHDKYQGDGIVEDEEETM 732
+ V R R R +++ R + SSP K K +G + ++
Sbjct: 110 SRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 169
Query: 733 ENNEEKKDRRKEEKE 747
E EE + K ++E
Sbjct: 170 EPQEESPLKSKSQEE 184
Score = 33.9 bits (76), Expect = 0.57
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 25/186 (13%)
Query: 460 TSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSAD 519
+S K+ + S+R +S H R S R ++R +R++ + ++ + R
Sbjct: 10 SSRSKSRSQSSSRSRSRS-HSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRNNRA---- 64
Query: 520 LRHDIDRRRKERSKERG--------------DSKGSRESSGSRKQEKTPKDYKEYKSYKD 565
+R R + R +G + + SR R + ++PK + S +
Sbjct: 65 MRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR-RSVSSQRS 123
Query: 566 DSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKT---HHEMKEYSGFAGVSR- 621
S+ +R SRS SS+S SS + SK+ +E +T E +E S S+
Sbjct: 124 RSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQE 183
Query: 622 -PRGTF 626
P+ TF
Sbjct: 184 EPKDTF 189
Score = 30.4 bits (67), Expect = 6.3
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Query: 631 GRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDD--GVDY--- 685
GR +R + ++ + S ++ + R + Y +S+ Y RD DY
Sbjct: 2 GRSNSR---SHSSRSKSRSQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRD 58
Query: 686 ----------WAKRGRGRGTFQRGRGRFNFKKSGSSPKW 714
+ RGRGRG +Q G GR++ + G P W
Sbjct: 59 YRNNRAMRRPYGYRGRGRGYYQGGGGRYH--RGGYRPVW 95
>gi|239756568 PREDICTED: similar to BCL2-associated transcription
factor 1 [Homo sapiens]
Length = 869
Score = 664 bits (1712), Expect = 0.0
Identities = 331/338 (97%), Positives = 331/338 (97%), Gaps = 2/338 (0%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRY RSRSRTYSRSRSRDRMYSRDYRRD
Sbjct: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRY--RSRSRTYSRSRSRDRMYSRDYRRD 58
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
YRNNR MRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV
Sbjct: 59 YRNNRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 118
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGE QEESPLK
Sbjct: 119 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGELQEESPLK 178
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
SKSQEEPKDTFEHD SESIDEFNKSSAT GDIWPGLSAYD SPRSPHSPSPIATPPSQSS
Sbjct: 179 SKSQEEPKDTFEHDSSESIDEFNKSSATCGDIWPGLSAYDXSPRSPHSPSPIATPPSQSS 238
Query: 241 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 300
SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS
Sbjct: 239 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 298
Query: 301 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK 338
PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK
Sbjct: 299 PAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLK 336
Score = 643 bits (1658), Expect = 0.0
Identities = 397/749 (53%), Positives = 449/749 (59%), Gaps = 128/749 (17%)
Query: 13 SKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPYG 72
S+S S S + S HS K S S S +S RS
Sbjct: 235 SQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERS------------------------ 270
Query: 73 YRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRS 132
G G G RY P+ + RSP + + +P R SR R S
Sbjct: 271 ----GSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAP--------RDESRGRSS 318
Query: 133 YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAE-GEPQEESPLKSKSQEEPKDTF 191
+ + ++ KR +E + + G +++ K K E+ +
Sbjct: 319 FYPDGGDQETAKTGK-------FLKRFTDEESRVFLLDRGNTRDKEASKEKGSEKGRAEG 371
Query: 192 EHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTV 251
E + E++D F+ + G +++S + +S +T
Sbjct: 372 EWEDQEALDYFSDKES-------GKQKFNDSEGDDTEETEDYRQFRKSVLADQGKSFATA 424
Query: 252 HSAKNTPSQHSHSIQHSPERSGSGS-VGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNA 310
S +NT + +++ + S G+ +G ++ ++ R S K ++
Sbjct: 425 -SHRNTEEE---GLKYKSKVSLKGNRESDGFREEKNDKHKETGYVVERPSTTKD---KHK 477
Query: 311 PRDESRGRSSFYPDGGDQETAKTGK----FLKSPPLHKNLDAREKSTFREESPLRIKMIA 366
D++ R + + E K+ K F SPPLHKNLDAREKSTFREESPLRIKMIA
Sbjct: 478 EEDKNSERITVKKETQSPEQVKSEKLKDLFDYSPPLHKNLDAREKSTFREESPLRIKMIA 537
Query: 367 SDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASK 426
SDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASK
Sbjct: 538 SDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASK 597
Query: 427 STSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISP 486
STSESFIQHIVSLVHHVKEQYFKSAAMTL+ERFTSYQKATEEHSTRQKSPEIHRRIDISP
Sbjct: 598 STSESFIQHIVSLVHHVKEQYFKSAAMTLSERFTSYQKATEEHSTRQKSPEIHRRIDISP 657
Query: 487 STLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSG 546
STLRK TRLAGEERVFKEENQKGDKKLRCDSADLRHDID RRKERSKERGDSKGSRES G
Sbjct: 658 STLRKDTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDHRRKERSKERGDSKGSRESRG 717
Query: 547 SRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKT 606
SRKQEKTPKDYKEYKSYKDDSKHKREQDHS SSSSSASPSSPSSREEKESKKEREEEFKT
Sbjct: 718 SRKQEKTPKDYKEYKSYKDDSKHKREQDHSLSSSSSASPSSPSSREEKESKKEREEEFKT 777
Query: 607 HHEMKEYSGFAGVSRPRGTFFRIRG--------RGRARGVFAGTNTGPNNSNTTFQKRPK 658
HHEMKEYSGFAGVSRPRGTF R RGR RG F
Sbjct: 778 HHEMKEYSGFAGVSRPRGTFHDDRDDGVDYWAKRGRGRGTF------------------- 818
Query: 659 EEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDK 718
+RGR GRFNFKKSGSSPKW HDK
Sbjct: 819 -----------------------------QRGR---------GRFNFKKSGSSPKWNHDK 840
Query: 719 YQGDGIVEDEEETMENNEEKKDRRKEEKE 747
YQGDGIVEDEEETMENNEEKKDR KEEKE
Sbjct: 841 YQGDGIVEDEEETMENNEEKKDRCKEEKE 869
Score = 42.4 bits (98), Expect = 0.002
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 25/112 (22%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
+ +S+ + S S SSS S S SR+++ S + R + ++Y
Sbjct: 735 KDDSKHKREQDHSLSSSSSASPSSPSSREEKESKKEREEEFKTHHEM---------KEYS 785
Query: 63 NNRGMRRPYGY--------------RGRGRGYYQGGGGRYH--RGGYRPVWN 98
G+ RP G RGRGRG +Q G GR++ + G P WN
Sbjct: 786 GFAGVSRPRGTFHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWN 837
Score = 42.0 bits (97), Expect = 0.002
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 28/230 (12%)
Query: 6 SRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNR 65
S +S K+ + S+R +S R+ S S R +R +R++ + ++ + R
Sbjct: 627 SERFTSYQKATEEHSTRQKSPEIHRRIDISP-STLRKDTRLAGEERVFKEENQKGDKKLR 685
Query: 66 ----GMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR-RSV 120
+R +R + R +G + + SR R R + ++PK +
Sbjct: 686 CDSADLRHDIDHRRKERSKERG--------------DSKGSRESRGSRKQEKTPKDYKEY 731
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTK-KAEGEPQEESPL 179
S + S+ +R S S SS S+SP S S ++ +E++ + K E +E S
Sbjct: 732 KSYKDDSKHKREQDHSLS----SSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGF 787
Query: 180 KSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSP 229
S+ P+ TF D + +D + K G G + N +S SP
Sbjct: 788 AGVSR--PRGTFHDDRDDGVDYWAKRGRGRGTFQRGRGRF-NFKKSGSSP 834
Score = 35.4 bits (80), Expect = 0.19
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 460 TSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSAD 519
+S K+ + S+R +S H R S R ++R +R++ + ++ + R
Sbjct: 10 SSRSKSRSQSSSRSRSRS-HSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRNNRA---- 64
Query: 520 LRHDIDRRRKERSKERG--------------DSKGSRESSGSRKQEKTPKDYKEYKSYKD 565
+R R + R +G + + SR R + ++PK + S +
Sbjct: 65 MRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR-RSVSSQRS 123
Query: 566 DSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKT---HHEMKEYSGFAGVSR- 621
S+ +R SRS SS+S SS + SK+ +E +T E++E S S+
Sbjct: 124 RSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGELQEESPLKSKSQE 183
Query: 622 -PRGTF 626
P+ TF
Sbjct: 184 EPKDTF 189
Score = 33.5 bits (75), Expect = 0.74
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 24/195 (12%)
Query: 564 KDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER-------EEEFKTHHEMKEYSGF 616
+ +S+ + SRS SSS S S SR+++ + R + + ++Y
Sbjct: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRDYRNN 62
Query: 617 AGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEY--TPKSKKYF 674
+ RP G RGR RG + G + + W+ + +P+ +
Sbjct: 63 RAMRRPYGY------RGRGRGYYQG-------GGGRYHRGGYRPVWNRRHSRSPRRGRSR 109
Query: 675 LHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSP--KWTHDKYQGDGIVEDEEETM 732
+ V R R R +++ R + SSP K K +G + ++
Sbjct: 110 SRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 169
Query: 733 ENNEEKKDRRKEEKE 747
E EE + K ++E
Sbjct: 170 ELQEESPLKSKSQEE 184
Score = 30.4 bits (67), Expect = 6.3
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Query: 631 GRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDD--GVDY--- 685
GR +R + ++ + S ++ + R + Y +S+ Y RD DY
Sbjct: 2 GRSNSR---SHSSRSKSRSQSSSRSRSRSHSRKKRYRSRSRTYSRSRSRDRMYSRDYRRD 58
Query: 686 ----------WAKRGRGRGTFQRGRGRFNFKKSGSSPKW 714
+ RGRGRG +Q G GR++ + G P W
Sbjct: 59 YRNNRAMRRPYGYRGRGRGYYQGGGGRYH--RGGYRPVW 95
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 367 bits (942), Expect = e-101
Identities = 297/834 (35%), Positives = 396/834 (47%), Gaps = 106/834 (12%)
Query: 2 GRSNSRSHSSRSKS-RSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
GRS SRS RS S RS+S SR+ +S S + R SS SRS S + SR R ++
Sbjct: 123 GRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRS---SSNHSRVESSKRKSAKE 179
Query: 61 YRNNRGMRRPYGYRGRGRG------YYQGG---------------------GGRYHRGGY 93
+++ RP G +G + GG G
Sbjct: 180 KKSSSKDSRPSQAAGDNQGDEAKEQTFSGGTSQDTKASESSKPWPDATYGTGSASRASAV 239
Query: 94 RPVWNRRHS--------------RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSS--R 137
+ R S RSPR SP S S S S Y+S +
Sbjct: 240 SELSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQMGSTLPSGAGYQSGTHQ 299
Query: 138 SPRSSSSRSSSPYSKSPVSKRR-------GSQEKQTKKAEGEP-------QEESPLKSKS 183
S S SP KSPV K GS +K+ A G +E+ K
Sbjct: 300 GQFDHGSGSLSPSKKSPVGKSPPSTGSTYGSSQKEESAASGGAAYTKRYLEEQKTENGKD 359
Query: 184 QEEPKDTFEHDPSESIDEFNKSSATSG----DIWPGLSAYDNSPRSPHSPSPIATPPSQS 239
+E+ + + + + F+ + G D + + + R SP
Sbjct: 360 KEQKQTNTDKEKIKEKGSFSDTGLGDGKMKSDSFAPKTDSEKPFRGSQSPKRYKLRDDFE 419
Query: 240 SSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVG---NGSSRYSPSQNSPIHHIP 296
+D K+ S + S +G N S ++ P
Sbjct: 420 KKMADFHKEEMDDQDKDKAKGRKESEFDDEPKFMSKVIGANKNQEEEKSGKWEGLVYAPP 479
Query: 297 SRRSPAKT--IAPQNAP---RDESRGRSS------FYPDGGDQETAKTGKFLKS--PPLH 343
+ KT + ++ P + E RG+ S F P+ + TA KS PP
Sbjct: 480 GKEKQRKTEELEEESFPERSKKEDRGKRSEGGHRGFVPEKNFRVTAYKAVQEKSSSPPPR 539
Query: 344 KNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLV 403
K ++R+K + + P K S + +V ++M D + L ++R L LV
Sbjct: 540 KTSESRDKLGAKGDFPTG-KSSFSITREAQVNVRMDSFDEDLARPSGLLAQERKLCRDLV 598
Query: 404 HSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQ 463
HS KKEQEFRSIF HI+ Q+ +S SE F QHIV++VHHVKE +F S+ MTL+ERFT Y
Sbjct: 599 HSNKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGMTLHERFTKYL 658
Query: 464 K--ATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLR 521
K +E + +KSPEIHRRIDISPST RKH E + +E K + K + D DLR
Sbjct: 659 KRGTEQEAAKNKKSPEIHRRIDISPSTFRKHGLAHDEMKSPREPGYKAEGKYKDDPVDLR 718
Query: 522 HDIDRRRK--ERSKERGDSK---GSRESSGSRKQ--EKTPKDYKEYKSYKDDSKHKREQD 574
DI+RR+K ER +RG S+ SR+SS SR++ EKT K +K K K KH+R +D
Sbjct: 719 LDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSAEKTEKTHKGSKKQK---KHRRARD 775
Query: 575 HSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEM-----KEYSGFA--GVSRPRGTF- 626
SRSSSSS+ S EE + E EE T + K++ G + G R RGTF
Sbjct: 776 RSRSSSSSSQSSHSYKAEEYTEETEEREESTTGFDKSRLGTKDFVGPSERGGGRARGTFQ 835
Query: 627 FRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRD-DGVDY 685
FR RGRG RG ++G N NNSN FQKR +EEEWDPEYTPKSKKY+LHDDR+ +G D
Sbjct: 836 FRARGRGWGRGNYSGNNN--NNSNNDFQKRNREEEWDPEYTPKSKKYYLHDDREGEGSDK 893
Query: 686 WAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDKYQG-DGIVEDEEETMENNEEK 738
W RGRGRG F RGRGRF F+KS +SPKW HDK+ G +G +ED+E EN EEK
Sbjct: 894 WVSRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEK 947
Score = 189 bits (479), Expect = 1e-47
Identities = 195/639 (30%), Positives = 301/639 (47%), Gaps = 73/639 (11%)
Query: 2 GRSNSRSHS-SRSKSRSQSSSRSRSRS--HSRKKRYSSRSRSRTYSRSRSRDRMYSRDYR 58
G +SRS S SRS+SRS S SRSRSRS SRK+R SSRSRSR+YS + +R+R + R Y+
Sbjct: 10 GSRSSRSRSASRSRSRSFSKSRSRSRSLSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQ 69
Query: 59 -RDYR-NNRGMRRPYGYRGRGRGYYQGGGGRYHRGG---YRPVW-NRRHSRSPRRGRSRS 112
RD+R +NRG RRPY +RGR RG+Y G+Y+RGG YR W N R + SPRRGRSRS
Sbjct: 70 NRDFRGHNRGYRRPYYFRGRNRGFYP--WGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRS 127
Query: 113 RSPKRRSVSSQRSRSRSRRSYRSS--RSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAE 170
RSPKRRS S RSRS SR S +SS RS RSSSSRSSS +S+ SKR+ ++EK++ +
Sbjct: 128 RSPKRRS-PSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSAKEKKSSSKD 186
Query: 171 GEPQEESPLKSKSQEEPKDTF------EHDPSESIDEFNKSSATSGDIWPGLSAYDNSP- 223
P + + ++ E + TF + SES + ++ +G + + SP
Sbjct: 187 SRPSQAAG-DNQGDEAKEQTFSGGTSQDTKASESSKPWPDATYGTGSASRASAVSELSPR 245
Query: 224 -RSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGS--GSVGNG 280
RSP SP+ + + S +P+ +T S + +SG+ G +G
Sbjct: 246 ERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQMGSTLPSGAGYQSGTHQGQFDHG 305
Query: 281 SSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSP 340
S SPS+ SP+ +SP T + + + E S GG A T ++L+
Sbjct: 306 SGSLSPSKKSPV-----GKSPPSTGSTYGSSQKEESAAS-----GG---AAYTKRYLEEQ 352
Query: 341 PLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKM-APVPLDDSNRPASLTKDRLLA 399
D +K T ++ ++ K SD+ + K+K + P DS +P ++
Sbjct: 353 KTENGKDKEQKQTNTDKEKIKEKGSFSDTGLGDGKMKSDSFAPKTDSEKPFRGSQS---- 408
Query: 400 STLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERF 459
K + R F+ K+ K + + K + K + +F
Sbjct: 409 -------PKRYKLRDDFEK-KMADFHKEEMDDQDKD--------KAKGRKESEFDDEPKF 452
Query: 460 TSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSAD 519
S ++ +KS + + P ++ EE F E ++K D+ R +
Sbjct: 453 MSKVIGANKNQEEEKSGKWEGLVYAPPGKEKQRKTEELEEESFPERSKKEDRGKRSEGGH 512
Query: 520 LRHDIDRRRK----ERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDH 575
++ + + +E+ S R++S SR + D+ KS S + Q +
Sbjct: 513 RGFVPEKNFRVTAYKAVQEKSSSPPPRKTSESRDKLGAKGDFPTGKS--SFSITREAQVN 570
Query: 576 SRSSSSSASPSSPSSREEKESK--------KEREEEFKT 606
R S + PS +E K ++E+EF++
Sbjct: 571 VRMDSFDEDLARPSGLLAQERKLCRDLVHSNKKEQEFRS 609
Score = 38.9 bits (89), Expect = 0.018
Identities = 46/195 (23%), Positives = 73/195 (37%), Gaps = 13/195 (6%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHSRK-KRYSSRSRSRTYSRSR-SRDRMYSRDYRRDY 61
S + R++ RS+SSS S SHS K + Y+ + R S + + R+ ++D+
Sbjct: 764 SKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYTEETEEREESTTGFDKSRLGTKDFVGPS 823
Query: 62 RNNRGMRR-PYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
G R + +R RGRG+ G G Y N ++ +R R P+
Sbjct: 824 ERGGGRARGTFQFRARGRGW---GRGNYSGNNN----NNSNNDFQKRNREEEWDPEYTPK 876
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQ--TKKAEGEPQE-ES 177
S + R S + R + P + R+ S + K GE E E
Sbjct: 877 SKKYYLHDDREGEGSDKWVSRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIED 936
Query: 178 PLKSKSQEEPKDTFE 192
E KD +
Sbjct: 937 DESGTENREEKDNIQ 951
Score = 35.8 bits (81), Expect = 0.15
Identities = 76/364 (20%), Positives = 120/364 (32%), Gaps = 63/364 (17%)
Query: 424 ASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRID 483
AS+S S SF + S + ++ R SY A H+ + P +++ D
Sbjct: 19 ASRSRSRSFSK---SRSRSRSLSRSRKRRLSSRSRSRSYSPA---HNRERNHPRVYQNRD 72
Query: 484 ISPST--LRKHTRLAGEERVFK---EENQKGDKKLRCDSADLRHDIDRRRKERSKERGDS 538
R+ G R F + N+ G R + + R RR RS+ R
Sbjct: 73 FRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRG-RSRSRSPK 131
Query: 539 KGS---RESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKE 595
+ S R S SR +K+ D + S + +HSR SS + K+
Sbjct: 132 RRSPSPRSRSHSRNSDKSSSDRS-----RRSSSSRSSSNHSRVESSKRKSAKEKKSSSKD 186
Query: 596 SKKEREEEFKTHHEMKEYSGFAGVSR-----------PRGTFFRIRGRGRARGVFAGTNT 644
S+ + E KE + G S+ P T+ G G A A +
Sbjct: 187 SRPSQAAGDNQGDEAKEQTFSGGTSQDTKASESSKPWPDATY----GTGSASRASAVSEL 242
Query: 645 GPNNSNTTF----------QKRPKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRG 694
P + ++ P+ P S + G Y + G +G
Sbjct: 243 SPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSSTSQMGSTLPSGAGY--QSGTHQG 300
Query: 695 TFQRGRGRFNFKKS---GSSPKWTHDKYQGDGIVED-------------EEETMENNEEK 738
F G G + K G SP T Y E EE+ EN ++K
Sbjct: 301 QFDHGSGSLSPSKKSPVGKSPPSTGSTYGSSQKEESAASGGAAYTKRYLEEQKTENGKDK 360
Query: 739 KDRR 742
+ ++
Sbjct: 361 EQKQ 364
Score = 30.0 bits (66), Expect = 8.2
Identities = 45/218 (20%), Positives = 74/218 (33%), Gaps = 38/218 (17%)
Query: 564 KDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER-------------EEEFKTHHEM 610
K S+ R + SRS S S S S SR S+K R + H +
Sbjct: 8 KSGSRSSRSRSASRSRSRSFSKSRSRSRSLSRSRKRRLSSRSRSRSYSPAHNRERNHPRV 67
Query: 611 KEYSGFAGVSRPRGTFFRIRGRGRA--------RGVFAGTNTGPNNSNTTFQ-KRPKEEE 661
+ F G +R + RGR R RG + + N + +R +
Sbjct: 68 YQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRS 127
Query: 662 WDPEY---TPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSG--------- 709
P+ +P+S+ + + D+ D + R + R + +KS
Sbjct: 128 RSPKRRSPSPRSRSHSRNSDKSSS-DRSRRSSSSRSSSNHSRVESSKRKSAKEKKSSSKD 186
Query: 710 SSPKWTHDKYQGDGIVEDEEETMENNEEKKDRRKEEKE 747
S P QGD E +E+T + + E +
Sbjct: 187 SRPSQAAGDNQGD---EAKEQTFSGGTSQDTKASESSK 221
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 109 bits (273), Expect = 8e-24
Identities = 185/681 (27%), Positives = 269/681 (39%), Gaps = 131/681 (19%)
Query: 2 GRSNSRSHSSRSKSRSQSSSR-SRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSR----D 56
GRS+SRS ++R +SRS++ +R RSRS + +R RSRSRT +R RSR R +R
Sbjct: 560 GRSHSRSPATRGRSRSRTPARRGRSRSRTPARR---RSRSRTPTRRRSRSRTPARRGRSR 616
Query: 57 YRRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSP-RRGRSRSRSP 115
R R R P R R R + G R R R SR+P RRGRSRSR+P
Sbjct: 617 SRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR--GRSRSRTPARRGRSRSRTP 674
Query: 116 KRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQE 175
RRS S RSR+ +RR SR+PR SRS S RRG +T + G
Sbjct: 675 ARRSGRS-RSRTPARRGRSRSRTPRRGRSRSRS-------LVRRGRSHSRTPQRRGRSGS 726
Query: 176 ESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSP--------- 226
S K+KS+ + S S E KS +S S +SPRS
Sbjct: 727 SSERKNKSRTSQR----RSRSNSSPEMKKSRISS-----RRSRSLSSPRSKAKSRLSLRR 777
Query: 227 ----HSPSP---IATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGN 279
SP P TPP +S S S P + TP + S S P + S +
Sbjct: 778 SLSGSSPCPKQKSQTPPRRSRSGSSQP-----KAKSRTPPRRSRSSSSPPPKQKSKT--- 829
Query: 280 GSSRYSPSQNSPIHHIPSRRSP--AKTIAPQNAPRDESRGRSSFYPDGGDQE-----TAK 332
SR S S +SP + S P +PQ + + R S + D E ++
Sbjct: 830 -PSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSR 888
Query: 333 TGKFLKSPPLHKNLDAREKSTFREESPL-RIKMIASDSHRPEVKLKMAPVPLDDSNR--- 388
SPP K+ +S R SP ++K I S R +P P ++R
Sbjct: 889 HSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSH-SGSSSPSPSRVTSRTTP 947
Query: 389 -------PASLTKDRLL-------ASTLVHSVKKEQEFR-----SIFDHIKL-------- 421
P S + RLL +S+ VK E R SI + K+
Sbjct: 948 RRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGP 1007
Query: 422 -------PQASKSTSESFIQHI---VSLVHHVK------EQYFKSAAMTLNERFTSYQKA 465
P + + +S +Q +SL VK E YF +++ L +
Sbjct: 1008 SLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLK----GQSQT 1063
Query: 466 TEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDID 525
+ +H + SPE+ + SPS + ++Q K R S+ ++
Sbjct: 1064 SPDHRSDTSSPEVRQSHSESPS--------------LQSKSQTSPKGGRSRSSSPVTELA 1109
Query: 526 RRRKERSKERGDSKGS--RESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSA 583
R R ++RG+ S +S S +Q + D Y + DS Q ++ S
Sbjct: 1110 SRSPIR-QDRGEFSASPMLKSGMSPEQSRFQSDSSSYPTV--DSNSLLGQSRLETAESKE 1166
Query: 584 SPSSPSSREEKESKKEREEEF 604
+ P + S ++++F
Sbjct: 1167 KMALPPQEDATASPPRQKDKF 1187
Score = 97.1 bits (240), Expect = 5e-20
Identities = 119/393 (30%), Positives = 159/393 (40%), Gaps = 49/393 (12%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSS---RSRSRT-----YSRSRSRDRMY 53
GRS SR+ + R SRS+S RSRS R R S R RSR+ +SRSR+ R
Sbjct: 493 GRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR-- 550
Query: 54 SRDYRRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSR 113
R R R R R RGR R GR P R SR+P R RSRSR
Sbjct: 551 -RGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSR--SRTPARRRSRSRTPTRRRSRSR 607
Query: 114 SPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSP-----YSKSPVSKRRGSQEKQTKK 168
+P RR S RSR+ +RR R +RSP SRS SP S+S RRG +T
Sbjct: 608 TPARRGRS--RSRTPARRRSR-TRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPA 664
Query: 169 AEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHS 228
G + +P + + + S S S + + G S HS
Sbjct: 665 RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS---------HS 715
Query: 229 PSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQ 288
+P S SSS K+ SQ SPE S SSR S S
Sbjct: 716 RTPQRRGRSGSSS---------ERKNKSRTSQRRSRSNSSPEMKKS----RISSRRSRSL 762
Query: 289 NSPIHHIPSRRSPAKTIAPQN-APRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLD 347
+SP SR S ++++ + P+ +S+ G Q AK+ ++PP
Sbjct: 763 SSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKS----RTPPRRSRSS 818
Query: 348 AREKSTFREESPLRIKMIASDSHRPEVKLKMAP 380
+ + ++P R +S H P+VK P
Sbjct: 819 SSPPPKQKSKTPSRQSHSSSSPH-PKVKSGTPP 850
Score = 75.1 bits (183), Expect = 2e-13
Identities = 145/676 (21%), Positives = 246/676 (36%), Gaps = 71/676 (10%)
Query: 16 RSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPYGYRG 75
R SSSRS + +KK+ R R R+ S S R+R S ++ + +R
Sbjct: 175 RESSSSRSPTPKQKKKKKKKDRGR-RSESSSPRRERKKSSKKKKHRSESESKKRK----- 228
Query: 76 RGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRS 135
HR ++R S+ +R RSRS +P +SRR++RS
Sbjct: 229 -------------HRSPTPK--SKRKSKDKKRKRSRSTTP----------APKSRRAHRS 263
Query: 136 SRSPRSSSSRSSSPYSKSPVSKR-------RGSQEKQTKKAEGE-PQEESPLKSKSQEEP 187
+ + +SSS +S S+S +K R ++ EG+ P E S +
Sbjct: 264 TSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSS 323
Query: 188 KDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATP-PSQSSSCSDAP 246
+T PS ++ +K P S + S P P+P TP ++ S P
Sbjct: 324 PETATKQPSSPYEDKDKDKKEKSATRPSPSP-ERSSTGPEPPAP--TPLLAERHGGSPQP 380
Query: 247 MLSTVHSAK--NTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKT 304
+ +T S + N PS+ S + SP +S + SS SP P SR + +
Sbjct: 381 LATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTK--VSRHASSSP 438
Query: 305 IAPQNAPRDESRGRSSFYPDGGDQE--TAKTGKFLKSPPLHKNLDAREKSTF---REESP 359
+P+ AP S S P ++ AK K P + +R +T R S
Sbjct: 439 ESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSR 498
Query: 360 LRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDR------LLASTLVHSVKKEQEFR 413
K S S P+ + + S P + R S + + R
Sbjct: 499 TPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSAR 558
Query: 414 SIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQ 473
H + P A++ S S +S + T R + + +R
Sbjct: 559 RGRSHSRSP-ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRS 617
Query: 474 KSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSK 533
++P R SP R +R + R + ++ ++ R S R + ++
Sbjct: 618 RTPARRRSRTRSPVRRRSRSR-SPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPAR 676
Query: 534 ERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREE 593
G S+ + R + +TP+ + + S +R + HSR+ S S R+
Sbjct: 677 RSGRSRSRTPARRGRSRSRTPRRGRS----RSRSLVRRGRSHSRTPQRRGRSGSSSERKN 732
Query: 594 KESKKEREEEFKTHHEMKE----YSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNS 649
K +R + EMK+ +S PR + + R R +G++ P
Sbjct: 733 KSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRS---KAKSRLSLRRSLSGSSPCPKQK 789
Query: 650 NTTFQKRPKEEEWDPE 665
+ T +R + P+
Sbjct: 790 SQTPPRRSRSGSSQPK 805
Score = 71.6 bits (174), Expect = 2e-12
Identities = 116/456 (25%), Positives = 164/456 (35%), Gaps = 69/456 (15%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSR------ 55
GRS S +SRS+S + R + SS+S SR RSRSR R+ R
Sbjct: 1760 GRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSG 1819
Query: 56 ----------DYRRDYRNNRG-MRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRR-HSR 103
R R RG R P R R R + R P +RR SR
Sbjct: 1820 YHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSR 1879
Query: 104 SPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQE 163
+P R RSRS + VS +RSRSR+ + R SRS S SR S PV++RR
Sbjct: 1880 TPLISRRRSRS-RTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSR 1938
Query: 164 KQT--KKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDN 221
T +++ + +S+S+ P S +S + + + S
Sbjct: 1939 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRT 1998
Query: 222 SP----RSPHSPSPIA-------TPPS-QSSSCSDAPMLSTVHSAKNTP----------- 258
SP RS SP+ TPP+ + S S P+L S +P
Sbjct: 1999 SPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRT 2058
Query: 259 ---SQHSHSIQHSP----ERSGSGSVGNGSSRYSP--------SQNSPIHHIPSRRSPAK 303
++ S+ SP RS SGS + S +P S+ P+ SR S
Sbjct: 2059 PRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFS 2118
Query: 304 TIAPQNAPRDESRGRSSFYPDGGDQETAKT-----GKFLKSP----PLHKNLDAREKSTF 354
+ P D R P G + G + P P H+ E
Sbjct: 2119 RPSMSPTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPDHQRTSVPENHA- 2177
Query: 355 REESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPA 390
+ L + I+ + RP + A + S PA
Sbjct: 2178 QSRIALALTAISLGTARPPPSMSAAGLAARMSQVPA 2213
Score = 69.3 bits (168), Expect = 1e-11
Identities = 112/416 (26%), Positives = 155/416 (37%), Gaps = 57/416 (13%)
Query: 3 RSNSRSHSSRSKS-RSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
R+ + S RS S + + RSRSRS K R + R S+S SR R SR R
Sbjct: 1752 RTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVT 1811
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
R RG G GY+ R R SR+P R RSRS R+
Sbjct: 1812 RRRRG----------GSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRS---RTSP 1858
Query: 122 SQRSRSRSRRS---YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESP 178
+ RSRSR S +R SRS SR S SPVS+RR + +
Sbjct: 1859 APWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPV 1918
Query: 179 LKSKSQEE-PKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSP----RSPHSPSPIA 233
+ +S+ P T S + +S + + + S P RS SPI
Sbjct: 1919 SRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPIT 1978
Query: 234 TPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIH 293
S+S + +P+ ++ +P S RS + V + R S S+ P
Sbjct: 1979 RRRSRSRT---SPVTRRRSRSRTSPVTRRRS------RSRTSPV---TRRRSRSRTPPAI 2026
Query: 294 HIPSRRSPAKTIAPQNAPRDESRGRSSF-YPDGGDQETAKTGK----FLKSPPLHKNLDA 348
RRS ++T PR SR RS T +T + +SPP + A
Sbjct: 2027 R---RRSRSRT---PLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSA 2080
Query: 349 REKSTFREESPL----------RIKMIASDSHRPEV--KLKMAPVPLDDSNRPASL 392
S+ R S R +A +S R + M+P PLD P L
Sbjct: 2081 SGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGML 2136
Score = 58.9 bits (141), Expect = 2e-08
Identities = 135/608 (22%), Positives = 207/608 (34%), Gaps = 94/608 (15%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYS-SRSRSRTYSRSRSRDRMYSRDYRRDY 61
RS+ S S S + + S ++S S + R+ SR S S S M R
Sbjct: 1377 RSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTPS 1436
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGG--GRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRS 119
R +R G G G G R+ G P + R+P RGRS S
Sbjct: 1437 RRSRS--------GSSPGLRDGSGTPSRHSLSGSSPGM-KDIPRTPSRGRSECDSSPEPK 1487
Query: 120 VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPL 179
Q R RS RS SS + +P +R GS+ +K +PL
Sbjct: 1488 ALPQTPRPRS----------RSPSSPELNNKCLTPQRERSGSESSVDQKTVA----RTPL 1533
Query: 180 KSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQS 239
+S+ + PS S E ++S + SP S + TP Q
Sbjct: 1534 GQRSRSGSSQELDVKPSASPQERSESDS-----------------SPDSKAKTRTPLRQR 1576
Query: 240 SSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRR 299
S +P + + ++ +P + RSGS R +P S P +
Sbjct: 1577 SRSGSSPEVDS--KSRLSPRR---------SRSGSSPEVKDKPRAAPRAQSGSDSSPEPK 1625
Query: 300 SPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESP 359
+P AP+ PR G SS + ++ T + PP K+ AR S
Sbjct: 1626 AP----APRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPP--KSRTARRGS------- 1672
Query: 360 LRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHI 419
S P+ K + P + P K RL + S E R+ H
Sbjct: 1673 -------RSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHR 1725
Query: 420 KLPQ------ASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLN--ERFTSYQKATEEHST 471
+ P A KS S + S + +S + +R S + + +T
Sbjct: 1726 RSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTT 1785
Query: 472 RQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKER 531
R++ R S ST R+ R RV + R + + R
Sbjct: 1786 RRRD-----RSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQ-----ESSRTSS 1835
Query: 532 SKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSR--SSSSSASPSSPS 589
+ RG S+ S + +P +K +S + H+R + + S S S +SP
Sbjct: 1836 RRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPV 1895
Query: 590 SREEKESK 597
SR S+
Sbjct: 1896 SRRRSRSR 1903
Score = 56.2 bits (134), Expect = 1e-07
Identities = 124/620 (20%), Positives = 212/620 (34%), Gaps = 80/620 (12%)
Query: 95 PVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSP 154
P ++ + R RS S SP+R +R +S ++ +RS + RS +P SK
Sbjct: 185 PKQKKKKKKKDRGRRSESSSPRR-----ERKKSSKKKKHRSESESKKRKHRSPTPKSKR- 238
Query: 155 VSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWP 214
K + + K+++ P+ +S S + + D S S + ++ T
Sbjct: 239 --KSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSS---DTSRSRSR-SAAAKTHTTALA 292
Query: 215 GLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGS 274
G S S R +P + P + S+ +P +T K S + + E+S
Sbjct: 293 GRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETAT----KQPSSPYEDKDKDKKEKS-- 346
Query: 275 GSVGNGSSRYSPS-QNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKT 333
++R SPS + S P +P +P+ + S P E + T
Sbjct: 347 ------ATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPT 400
Query: 334 GKFLKSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLT 393
+SPP K+ + +S+ E SP + H P P S+R S +
Sbjct: 401 RD--RSPP--KSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSS 456
Query: 394 KDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAM 453
SK+ S + S H + +S +
Sbjct: 457 P-----------------------------TSKNRSHGRAKRDKSHSHTPSRRMGRSRSP 487
Query: 454 TLNERFTSYQKA-TEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKK 512
+R S + T+ +R +SP+ R + + G R + G +
Sbjct: 488 ATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSR---SPQRPGWSR 544
Query: 513 LRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKRE 572
R + RR + RS RG S ++ R + +TP +S + R
Sbjct: 545 SR--------NTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRS 596
Query: 573 QDHSRSSSSSASPSSPS-SREEKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRG 631
+ +R S S +P+ SR +++ + S R R RG
Sbjct: 597 RTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRG 656
Query: 632 RGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGR 691
R R+R G + S T ++ + P +S+ R +RGR
Sbjct: 657 RSRSR---TPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSL-VRRGR 712
Query: 692 GRGTFQRGRGRFNFKKSGSS 711
+ RGR SGSS
Sbjct: 713 SHSRTPQRRGR-----SGSS 727
Score = 55.5 bits (132), Expect = 2e-07
Identities = 58/210 (27%), Positives = 78/210 (37%), Gaps = 18/210 (8%)
Query: 111 RSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKA- 169
RS S S SS S S S S SS S S S SS P KR S K+A
Sbjct: 2531 RSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAV 2590
Query: 170 -EGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHS 228
EG P E +P K K + + S S + SS++S S+ +S S S
Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650
Query: 229 P------------SPIATPPSQSSSCSDAPMLSTVHSAKNTP----SQHSHSIQHSPERS 272
P SP PP + S S + ++ +++ + S Q SP
Sbjct: 2651 PAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQ 2710
Query: 273 GSGSVGNGSSRYSPSQNSPIHHIPSRRSPA 302
S S GS R + H R +P+
Sbjct: 2711 QSSSSERGSRRGQRGDSRSPSHKRRRETPS 2740
Score = 52.4 bits (124), Expect = 2e-06
Identities = 97/340 (28%), Positives = 131/340 (38%), Gaps = 51/340 (15%)
Query: 3 RSNSRSHSS-RSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
RS S S S R S SSS S H K R ++R SR+ +++ R R RR
Sbjct: 1635 RSRSGSSSKGRGPSPEGSSSTESSPEHPPKSR-TARRGSRSSPEPKTKSRTPPR--RRSS 1691
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR-SV 120
R++ + R R R R P R S S +SRS +RR S
Sbjct: 1692 RSSPELTRKARLSRRSRS---ASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSA 1748
Query: 121 SSQRSRSRSRRSYRSSRSPRS-SSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPL 179
SS R+++ SRR S PR SRS S K+ ++RR G Q S
Sbjct: 1749 SSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRR--------DRSGSSQSTSRR 1800
Query: 180 KSKSQEEPKDTFE-------HDPSESIDEFNKSSATSGDIWPGLS----AYDNSPRSPHS 228
+ +S+ + T H S + E SS TS G S RS S
Sbjct: 1801 RQRSRSRSRVTRRRRGGSGYHSRSPARQE---SSRTSSRRRRGRSRTPPTSRKRSRSRTS 1857
Query: 229 PSP------IATPPSQSSSCSDAPMLSTVHSAKNTP------SQHSHSIQHSPERSGSGS 276
P+P A+P + S S P++S S T S+ S+ RS +
Sbjct: 1858 PAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASP 1917
Query: 277 VGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESR 316
V S R S S+ P + RRS ++T P R SR
Sbjct: 1918 V---SRRRSRSRTPP---VTRRRSRSRT--PTTRRRSRSR 1949
Score = 50.4 bits (119), Expect = 6e-06
Identities = 132/621 (21%), Positives = 209/621 (33%), Gaps = 80/621 (12%)
Query: 109 RSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPY----SKSPVSKRRGSQEK 164
RS + SP+ R S+ +S+ S SP+ SRSSSP S+SP+ + RG
Sbjct: 1068 RSDTSSPEVRQSHSESPSLQSK----SQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSA 1123
Query: 165 QTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGD---IWPGLSAYDN 221
G E+S +S S P D + + + +A S + + P A +
Sbjct: 1124 SPMLKSGMSPEQSRFQSDSSSYP----TVDSNSLLGQSRLETAESKEKMALPPQEDATAS 1179
Query: 222 SPRSPHSPSP----------------IATPPSQSSSCSDAPMLSTVHSAKNTPSQHSH-- 263
PR SP + TPP + S +P +SA T SQ
Sbjct: 1180 PPRQKDKFSPFPVQDRPESSLVFKDTLRTPPRERSGAGSSPETKEQNSALPTSSQDEELM 1239
Query: 264 SIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPS-RRSPAKTIA---PQNAPRDESRGRS 319
+ E + + SS S P PA ++ Q+ E+
Sbjct: 1240 EVVEKSEEPAGQILSHLSSELKEMSTSNFESSPEVEERPAVSLTLDQSQSQASLEAVEVP 1299
Query: 320 SFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPLRIKM-------IASDSHRP 372
S G + K L + PL +N FR PL +M + D + P
Sbjct: 1300 SMASSWGGPHFSPEHKELSNSPLREN-SFGSPLEFRNSGPLGTEMNTGFSSEVKEDLNGP 1358
Query: 373 EVKLKMAPVPLD---DSNRPASLTKDRLLASTLVHS-VKKEQEFRS-IFDHI-KLPQASK 426
+ LD S R + + L + + + Q S + D + + P +
Sbjct: 1359 FLNQLETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRER 1418
Query: 427 STSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISP 486
S+S S + L + ++ L + HS SP + + I +P
Sbjct: 1419 SSSASSPEMKDGLPRTPSRRSRSGSSPGLRDG----SGTPSRHSLSGSSPGM-KDIPRTP 1473
Query: 487 STLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSK------- 539
S R + E + + + + + + +R + S+ D K
Sbjct: 1474 SRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPL 1533
Query: 540 GSRESSGSR-----KQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSR--- 591
G R SGS K +P++ E S D R RS S S+ SR
Sbjct: 1534 GQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSP 1593
Query: 592 EEKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFR-IRGRGRARGVFAGTNTGPNNSN 650
S E + K + SG P+ R + R R+ G P S+
Sbjct: 1594 RRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSS 1653
Query: 651 TTFQKRPKEEEWDPEYTPKSK 671
+T E PE+ PKS+
Sbjct: 1654 ST--------ESSPEHPPKSR 1666
Score = 48.9 bits (115), Expect = 2e-05
Identities = 62/231 (26%), Positives = 92/231 (39%), Gaps = 23/231 (9%)
Query: 95 PVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSP 154
P + + SPR S R+ R+RSR + R +S R+ SP
Sbjct: 2373 PALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSP----- 2427
Query: 155 VSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPK----DTFEHDPSESIDEFNKSSATS- 209
S R G Q+ + Q SP+ S ++ + T S+S+ ++ TS
Sbjct: 2428 -SSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSS 2486
Query: 210 -GDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHS 268
GD LS +P PH S + PP+ S+ L+ + AK S S S S
Sbjct: 2487 AGDHNGMLSV--PAPGVPH--SDVGEPPA-STGAQQPSALAALQPAKERRSSSSSSSSSS 2541
Query: 269 PERSGSGSVGNGSSRYSPSQNSPIHHIP------SRRSPAKTIAPQNAPRD 313
S S S + SS S S +S +P +R P+ T AP+ A R+
Sbjct: 2542 SSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVRE 2592
Score = 48.9 bits (115), Expect = 2e-05
Identities = 57/214 (26%), Positives = 82/214 (38%), Gaps = 16/214 (7%)
Query: 115 PKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEP- 173
P + + Q S + + + RS SSSS SSS S S S S + +EG
Sbjct: 2509 PPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSL 2568
Query: 174 --QEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSP 231
Q E LK P P E++ E T S+ +S S S S
Sbjct: 2569 PVQPEVALKRVPSPTPA------PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSS 2622
Query: 232 IATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSP 291
++ S SSS S + S+ S+ ++PS Q P+ + G R S S P
Sbjct: 2623 SSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERR-SRSPRKP 2681
Query: 292 IHHIPSRRS------PAKTIAPQNAPRDESRGRS 319
I + RS + +PQ +PRD+ S
Sbjct: 2682 IDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSS 2715
Score = 48.9 bits (115), Expect = 2e-05
Identities = 50/166 (30%), Positives = 61/166 (36%), Gaps = 23/166 (13%)
Query: 104 SPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQE 163
+P + + RS S S SS S S S S SS S SSSS SSS S SP + G Q
Sbjct: 2599 TPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQ- 2657
Query: 164 KQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSP 223
P+ SP K P + P + ID S + S SP
Sbjct: 2658 -------ALPKPASPKK----PPPGERRSRSPRKPIDSLRDSRSLS-----------YSP 2695
Query: 224 RSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSP 269
PSP +P Q SS S+ +PS SP
Sbjct: 2696 VERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSP 2741
Score = 47.4 bits (111), Expect = 5e-05
Identities = 116/558 (20%), Positives = 187/558 (33%), Gaps = 94/558 (16%)
Query: 116 KRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQE 175
+R +VS +S+S+ S + P +SS +S E +
Sbjct: 1276 ERPAVSLTLDQSQSQASLEAVEVPSMASSWGGPHFSP-----------------EHKELS 1318
Query: 176 ESPLKSKSQEEPKDTFEHDP----------SESIDEFNKSSATSGDIWPGLSAYDNSPRS 225
SPL+ S P + P SE ++ N + P L + S RS
Sbjct: 1319 NSPLRENSFGSPLEFRNSGPLGTEMNTGFSSEVKEDLNGPFLNQLETDPSLDMKEQSTRS 1378
Query: 226 P-HSPSPIATPPSQSSSCSDAPMLST--VHSAKNTPSQHSHSIQHSPE-----------R 271
HS S ++ + + S +S+ + + TPS+ S SPE R
Sbjct: 1379 SGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTPSRR 1438
Query: 272 SGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETA 331
S SGS S +P H S SP P+ R S SS P Q
Sbjct: 1439 SRSGS----SPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPR 1494
Query: 332 KTGKFLKSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPAS 391
+ SP L+ ++ ES + K +A P + + + +P++
Sbjct: 1495 PRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVA---RTPLGQRSRSGSSQELDVKPSA 1551
Query: 392 LTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSA 451
++R + + S K + L Q S+S S + +
Sbjct: 1552 SPQERSESDSSPDSKAKTRT--------PLRQRSRSGSSPEVD----------------S 1587
Query: 452 AMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDK 511
L+ R + + E + +P D SP A R ++ G
Sbjct: 1588 KSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPK------APAPRALPRRSRSGSS 1641
Query: 512 -KLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHK 570
K R S + + + K R +GSR S + + +TP + +S + ++
Sbjct: 1642 SKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKA 1701
Query: 571 REQDHSRSSSS--------------SASPSSPSSREEKESKKEREEEFKTHHEMKEYSGF 616
R SRS+SS S S SSP E+ S + R + G
Sbjct: 1702 RLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGR 1761
Query: 617 AGVSRPRGTFFRIRGRGR 634
+ +PRG R R R R
Sbjct: 1762 SPSPKPRG-LQRSRSRSR 1778
Score = 46.6 bits (109), Expect = 8e-05
Identities = 53/190 (27%), Positives = 67/190 (35%), Gaps = 39/190 (20%)
Query: 134 RSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEH 193
RSS S SSSS SSS S S S GS ++ + Q E LK P
Sbjct: 2531 RSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPA----- 2585
Query: 194 DPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHS 253
P E++ E P P+P SSS S
Sbjct: 2586 -PKEAVREGR----------------------PPEPTPAKRKRRSSSSSSS--------- 2613
Query: 254 AKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRD 313
++ S S S S S S S + SS S S +SP P ++ K +P+ P
Sbjct: 2614 --SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPG 2671
Query: 314 ESRGRSSFYP 323
E R RS P
Sbjct: 2672 ERRSRSPRKP 2681
Score = 45.8 bits (107), Expect = 1e-04
Identities = 51/156 (32%), Positives = 62/156 (39%), Gaps = 22/156 (14%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY- 61
R +S S SS S S S SSS S S S S SS S S + S S S + + +
Sbjct: 2605 RRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPAS 2664
Query: 62 --------RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSR 113
R +R R+P R Y PV RR S P +S
Sbjct: 2665 PKKPPPGERRSRSPRKPIDSLRDSRSL-----------SYSPVERRRPSPQPSPRDQQSS 2713
Query: 114 SPKRRSVSSQR--SRSRSRRSYRSSRSPRSSSSRSS 147
S +R S QR SRS S + R + SPR RSS
Sbjct: 2714 SSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRSS 2749
Score = 30.0 bits (66), Expect = 8.2
Identities = 19/49 (38%), Positives = 20/49 (40%)
Query: 548 RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKES 596
R E TP K S S S SSSSS+S SS SS S
Sbjct: 2594 RPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2642
>gi|115511057 hypothetical protein LOC256643 [Homo sapiens]
Length = 682
Score = 103 bits (258), Expect = 4e-22
Identities = 154/644 (23%), Positives = 255/644 (39%), Gaps = 109/644 (16%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHSRKK--------------------RYSSRSRSRTY 43
+ SRS S R K RS S R+ H +++ R S ++
Sbjct: 2 ARSRSRSPRWKHRSLSPV-PRNAEHYKQRHSHGHYGCEYRKDPKRPVAWRMDSEKHGQSK 60
Query: 44 SRSRSRDRMYSRDYRR-----DYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWN 98
R SR +Y + Y + RN+ + Y Y+ RGY G G R Y P ++
Sbjct: 61 PRIPSRGNIYYQSYEHRSPSPNIRNS--LENVYMYKPH-RGYSPGRGDSNRRAQYMPKYS 117
Query: 99 RRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSS---------- 148
P + R+ P++ R R S + + P+ S + S
Sbjct: 118 EG---IPYKEHERNSYPQKVQGGHSPDDHRVRGSGKGGKPPQRSIADSFRFEGKWHEDEL 174
Query: 149 -----PYSKSPVSKRRGSQEKQTKKA--EGEPQEESPLK-SKSQEEPKDTFEHD------ 194
K S RRGS++ +T+ + + P++ K + + PKD ++
Sbjct: 175 RHQRIQEEKYSQSTRRGSEDFETRSSFQKRYPEDRDFRKYGHTSKRPKDVERYESREPAR 234
Query: 195 -----PSESIDEFNKSSATSGDIWP-GLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPML 248
P S+ + + + D W G Y ++ R H + AT S +L
Sbjct: 235 NPKWKPEHSLPPYQEDT----DQWNLGPQTYRHAERE-HPETSSATKVSYDYRHKRPKLL 289
Query: 249 STVHSAKNTPSQ-------HSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSP 301
+ +Q +S Q P G R +Q+ + P + S
Sbjct: 290 DGDQDFSDGRTQKYCKEEDRKYSFQKGPLNRELDCFNTGRGR--ETQDGQVKE-PFKPSK 346
Query: 302 AKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKN-LDAREKSTFREESPL 360
+IA + +++ RSS D ++ K G K N LD +K + SP+
Sbjct: 347 KDSIACTYSNKNDVDLRSS--NDKWKEKIKKEGDCRKESNSSSNQLDKSQKLPDVKPSPI 404
Query: 361 RIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIK 420
++ S +V +K +D +S + +R ++ LV +K + F +F+H+
Sbjct: 405 NLR---KKSLTVKVDVKKT---VDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLD 458
Query: 421 LPQ--ASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQ---KATEEHSTRQKS 475
Q +K T E F Q I++++H VK YF S +TL+ERF++ Q KA
Sbjct: 459 STQNTENKPTGE-FAQEIITIIHQVKANYFPSPGITLHERFSTMQDIHKADVNEIPLNSD 517
Query: 476 PEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKER 535
PEIHRRID+S + L+ ++ V E Q K + D DLRHDI+RRRKER +
Sbjct: 518 PEIHRRIDMSLAELQ------SKQAVIYESEQTLIKII--DPNDLRHDIERRRKERLQNE 569
Query: 536 GD---------SKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHK 570
+ + + SS S+ KD +K ++ + H+
Sbjct: 570 DEHIFHIASAAERDDQNSSFSKNYTTQRKDIITHKPFEVEGNHR 613
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 96.3 bits (238), Expect = 9e-20
Identities = 98/347 (28%), Positives = 136/347 (39%), Gaps = 64/347 (18%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
G S+ R S RS+S S + R SRS S K RSRSR+ ++R R R S + RD
Sbjct: 379 GSSSPRKESGRSQSGSPNKQRDHSRSRSPNKA-RDRSRSRSPYKARDRSRSRSPNKARDC 437
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPR--RGRSRSRSPKRRS 119
+R PY R R R + R SRSP R RSRSRSP +
Sbjct: 438 SRSRS---PYKARDRSRSRSPNKARDHSR-----------SRSPNKARDRSRSRSPSKER 483
Query: 120 VSSQRSRSRSRRSYRSSRSP---------RSSSSRSSSPYSKSPVSKRRGSQEKQTKKAE 170
SQ R +R SRSP RSSS S+SP +R+ Q + K
Sbjct: 484 DHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKER 543
Query: 171 GEPQEESP--------LKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNS 222
Q SP +S S+E + + E ++SS+ D +
Sbjct: 544 DRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERD--------HSR 595
Query: 223 PRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSS 282
RSP+ S + P + S + +HS +P + G+ S SS
Sbjct: 596 SRSPNKQSGYSRPRASS-------------------KEKAHSRSRTPSKEGNHSQSRTSS 636
Query: 283 RYSPSQNSPIHHIPS-RRSPAKT--IAPQNAPRDESRGRSSFYPDGG 326
+ S S + P +RSP +T ++ P S S +P GG
Sbjct: 637 KESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGG 683
Score = 84.0 bits (206), Expect = 5e-16
Identities = 154/679 (22%), Positives = 246/679 (36%), Gaps = 98/679 (14%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
R++ S SS ++S S+ R+ S S + R RS++RT SR + R D R
Sbjct: 53 RNSVMSPSSSKSTKSTSTKRAPSNRPSSRSRV--RSKARTPSRVSTDTRTSKASKASDVR 110
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSS 122
++ RR RGR G RR SRS +R SR+ +P R
Sbjct: 111 CHQ--RRGTHSRGRTPG-------------------RRGSRSSKRSPSRASTPGR----- 144
Query: 123 QRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSK 182
R+ + +SR +P S+ S+ + +T E + L K
Sbjct: 145 ----------IRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRTSNRERSDSQPRNLSKK 194
Query: 183 SQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIAT-----PPS 237
S P + SE + + + P DN SP S + + PS
Sbjct: 195 SYRPPGGSGIGRSSELAVTPSTAKCQTPTGIPSKEKSDNP--SPSSSRKVKSYGQMIIPS 252
Query: 238 QSSSCSDAPMLSTVHS---AKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHH 294
+ S S M S V S A SHS SP RS SGS SR S + +H
Sbjct: 253 REKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVR-SHSWKRNH 311
Query: 295 IPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTF 354
+R K I Q +SR S G Q ++T + +S +N +
Sbjct: 312 SRARSRTRKGILSQMGRHSQSRSHSK----GKSQNQSRTPRRGRSHNWSRNPSKERSHSH 367
Query: 355 REESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRS 414
S S S R E + P + S + ++ + S K ++
Sbjct: 368 SRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSR 427
Query: 415 IFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQK 474
K S+S S +K+ R S KA + +R
Sbjct: 428 SRSPNKARDCSRSRSP-----------------YKARD---RSRSRSPNKARDHSRSRSP 467
Query: 475 SPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLR-CDSADLRHDIDRRRKERSK 533
+ R SPS R H++L + + K R C R+ + SK
Sbjct: 468 NKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQC----------RQSRSSSK 517
Query: 534 ERGDSKGSRESS--GSRKQEKTP---KDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSP 588
ER D + SR S R+Q ++P +D + +S ++ +H++ + S+ S
Sbjct: 518 ER-DHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPS 576
Query: 589 SSREEKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRAR-----GVFAGTN 643
RE ++S+ EE + H + + +G SRPR + + + R+R G + +
Sbjct: 577 KERERRQSRSSSEE--RDHSRSRSPNKQSGYSRPRAS-SKEKAHSRSRTPSKEGNHSQSR 633
Query: 644 TGPNNSNTTFQKRPKEEEW 662
T S+ + P+ +W
Sbjct: 634 TSSKESDPSQSTVPRSPDW 652
Score = 79.0 bits (193), Expect = 2e-14
Identities = 162/620 (26%), Positives = 233/620 (37%), Gaps = 72/620 (11%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
GR SRS S RS SR+ S+ R R+H + +SR R+ T + SR + Y R R
Sbjct: 125 GRRGSRS-SKRSPSRA--STPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRP--RTS 179
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSP-KRRSV 120
R +P + Y GG R V + S + ++ + P K +S
Sbjct: 180 NRERSDSQPRNL--SKKSYRPPGGSGIGRSSELAV-----TPSTAKCQTPTGIPSKEKSD 232
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGS--QEKQTKKAEGEPQEESP 178
+ S SR +SY P S YS + +S R S Q + + Q SP
Sbjct: 233 NPSPSSSRKVKSYGQMIIPSREKS-----YSPTEMSSRVKSYNQASTRSRPQSHSQSRSP 287
Query: 179 LKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRS-PHSPSPIATPPS 237
+S+S + K T S S N S A S LS +S HS
Sbjct: 288 RRSRSGSQ-KRTHSRVRSHSWKR-NHSRARSRTRKGILSQMGRHSQSRSHS-------KG 338
Query: 238 QSSSCSDAPMLSTVHSAKNTPSQ---HSHSIQHSPERS--GSGSVGNGSSR-YSPSQNSP 291
+S + S P H+ PS+ HSHS S ER GS S S R S S N
Sbjct: 339 KSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQ 398
Query: 292 IHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREK 351
H S RSP N RD SR RS + A+ +SP ++ +R +
Sbjct: 399 RDHSRS-RSP-------NKARDRSRSRSPY--------KARDRSRSRSPNKARDC-SRSR 441
Query: 352 STF--REESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKE 409
S + R+ S R A D R +P D +R S +K+R + + S KE
Sbjct: 442 SPYKARDRSRSRSPNKARDHSR-----SRSPNKARDRSRSRSPSKER--DHSQLGSPSKE 494
Query: 410 QEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKA---- 465
++ R K Q +S S S + KE+ + + ER S ++
Sbjct: 495 RDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEE 554
Query: 466 TEEHSTRQKSPEIHRRIDISPS--TLRKHTRLAGEERVFKE----ENQKGDKKLRCDSAD 519
E +R S E RR SPS R+ +R + EER Q G + R S +
Sbjct: 555 REHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKE 614
Query: 520 LRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSS 579
H R + S+ES S+ D+K + R + S
Sbjct: 615 KAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSKTSSH 674
Query: 580 SSSASPSSPSSREEKESKKE 599
S S PS + + +S+ +
Sbjct: 675 SPSTFPSGGQTLSQDDSQAD 694
Score = 52.4 bits (124), Expect = 2e-06
Identities = 107/504 (21%), Positives = 180/504 (35%), Gaps = 84/504 (16%)
Query: 141 SSSSRSSSP-YSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESI 199
SS RSS P S +P + + + + + +P +S +P + S S
Sbjct: 2 SSPKRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSRNSVMSPSS 61
Query: 200 DEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPS 259
+ KS++T A N P S A PS+ S+ + S +
Sbjct: 62 SKSTKSTSTK-------RAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQR 114
Query: 260 QHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESR-GR 318
+ +HS +P R GS S S+RSP++ P +R G
Sbjct: 115 RGTHSRGRTPGRRGSRS--------------------SKRSPSRASTPGRIRTHGARPGM 154
Query: 319 SSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKM 378
+S Q+ GK P +++ RE S + + ++ S+RP
Sbjct: 155 ASRVRTPTSQQKGSRGKSYGRP----------RTSNRERSDSQPRNLSKKSYRP------ 198
Query: 379 APVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVS 438
P R + S K Q I K S S+S +
Sbjct: 199 ----------PGGSGIGRSSELAVTPSTAKCQTPTGIPSKEKSDNPSPSSSRKVKSYGQM 248
Query: 439 LVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGE 498
++ ++ Y + ++ R SY +A+ + S R S S R H+R+
Sbjct: 249 IIPSREKSY---SPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSH 305
Query: 499 ERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYK 558
+K + + + R I + S+ R SKG S+ Q +TP+ +
Sbjct: 306 S--WKRNHSRARSRTR-------KGILSQMGRHSQSRSHSKGK-----SQNQSRTPRRGR 351
Query: 559 EYKSYKDDSKHKREQDHSRSSS------SSASPSSPSSREEKESKKEREEEFKTHHEMKE 612
+ ++ SK +R HSRSSS S+SP S R + S ++ + H +
Sbjct: 352 SHNWSRNPSK-ERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRD----HSRSRS 406
Query: 613 YSGFAGVSRPRGTFFRIRGRGRAR 636
+ SR R ++ R R R+R
Sbjct: 407 PNKARDRSRSRSP-YKARDRSRSR 429
Score = 50.8 bits (120), Expect = 4e-06
Identities = 113/536 (21%), Positives = 187/536 (34%), Gaps = 47/536 (8%)
Query: 110 SRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKA 169
++S +P R V ++ + SR+ S SP SS S S+ ++P S R S+ + KA
Sbjct: 35 TKSATPNRSLVPTKPATSRN-----SVMSPSSSKSTKSTSTKRAP-SNRPSSRSRVRSKA 88
Query: 170 EGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSP 229
+ + ++ + D H + S PG +S RSP
Sbjct: 89 RTPSRVSTDTRTSKASKASDVRCHQ---------RRGTHSRGRTPGRRGSRSSKRSPSRA 139
Query: 230 SPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSR--YSPS 287
S + + A + T S + S+ + R S S S+ Y P
Sbjct: 140 STPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRTSNRERSDSQPRNLSKKSYRPP 199
Query: 288 QNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLD 347
S I RS + P A G S + D + + + +KS +
Sbjct: 200 GGSGIG-----RSSELAVTPSTAKCQTPTGIPS--KEKSDNPSPSSSRKVKSYG-QMIIP 251
Query: 348 AREKSTFREESPLRIKMI--ASDSHRPEVKLKM-APVPLDDSNRPASLTKDRLLASTLVH 404
+REKS E R+K AS RP+ + +P ++ + ++ R + H
Sbjct: 252 SREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNH 311
Query: 405 SVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQK 464
S + + + I + S+S S+ Q+ + + S
Sbjct: 312 SRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSS 371
Query: 465 ATEEHSTRQKSP--EIHRRIDISPSTLRKHTRLAG----EERVFKEENQKGDKKLRCDSA 518
+ E SP E R SP+ R H+R +R K + R S
Sbjct: 372 SKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSP 431
Query: 519 DLRHDIDRRR-----KERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHK--- 570
+ D R R ++RS+ R +K +R+ S SR K +D +S + H
Sbjct: 432 NKARDCSRSRSPYKARDRSRSRSPNK-ARDHSRSRSPNKA-RDRSRSRSPSKERDHSQLG 489
Query: 571 ---REQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVSRPR 623
+E+DH RS S S SR + + R + + S R R
Sbjct: 490 SPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDR 545
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 93.6 bits (231), Expect = 6e-19
Identities = 100/288 (34%), Positives = 133/288 (46%), Gaps = 32/288 (11%)
Query: 4 SNSRSHS-SRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD-- 60
S+S+S S SRS SRS+S SRSRS+S SR K+ SRS S+ SRSRS SR +D
Sbjct: 214 SHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQA 273
Query: 61 ---YRNNRGMRRPYG-------------YRGRGRGYYQGGGGRYHRG-GYRPVWNRRHSR 103
+NN + +P R + R + G RG + SR
Sbjct: 274 EEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSR 333
Query: 104 SPRRGRSRSRSPKR-RSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQ 162
S +G SRSRS R +S ++ R RSR RS RS S RS SK + GS
Sbjct: 334 SRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKR--DSKAGSS 391
Query: 163 EKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESID-EFNKSSATSGDIWPGLS-AYD 220
+K+ K+ Q SP +S S+E EH SES E S +G S +
Sbjct: 392 KKKKKEDTDRSQSRSPSRSVSKER-----EHAKSESSQREGRGESENAGTNQETRSRSRS 446
Query: 221 NSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHS 268
NS P+ PS + S+S+S + + S SA +PS+ S S HS
Sbjct: 447 NSKSKPNLPSE-SRSRSKSASKTRSRSKSRSRSASRSPSR-SRSRSHS 492
Score = 67.4 bits (163), Expect = 5e-11
Identities = 74/224 (33%), Positives = 97/224 (43%), Gaps = 49/224 (21%)
Query: 1 MGRSNSRS---HSSRSKSRSQSSSR----------SRSRSHSRKKRYS-SRSRSRTYSRS 46
+G+ SRS H S+SKSRS+S R SR RS + R S SRSRS+ SRS
Sbjct: 283 VGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRS 342
Query: 47 RSRDRMYSRDYR------RDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRR 100
RSR R S+D R R+ +R R R R RG + + + +R
Sbjct: 343 RSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRS 402
Query: 101 HSRSPRRGRSRSRSPKRRSVSSQR----------------SRSRSRRSYRSSRSPRSSSS 144
SRSP R S+ R +S SSQR SRSRS S P S S
Sbjct: 403 QSRSPSRSVSKERE-HAKSESSQREGRGESENAGTNQETRSRSRS-NSKSKPNLPSESRS 460
Query: 145 RSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPK 188
RS S SK R + +++ A SP +S+S+ +
Sbjct: 461 RSKS------ASKTRSRSKSRSRSA-----SRSPSRSRSRSHSR 493
Score = 59.3 bits (142), Expect = 1e-08
Identities = 66/241 (27%), Positives = 91/241 (37%), Gaps = 16/241 (6%)
Query: 101 HSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRG 160
+ R R + S +RRS S RS SRSR R SR RS S S S +SKS R G
Sbjct: 166 NGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSG 225
Query: 161 SQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYD 220
S+ + K+ Q S K + P S S KS + S D A +
Sbjct: 226 SRSR--SKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSA---GKSRSKSKD-----QAEE 275
Query: 221 NSPRSPHSPSPIATPPSQSSSCSDAPMLS---TVHSAKNTPSQHSHSIQHSPERSGSGSV 277
+ + P + PS+ S S + S V K S + S +S S S
Sbjct: 276 KIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSR 335
Query: 278 GNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFL 337
G SR S++ +R K ++ R SR +S G + +K G
Sbjct: 336 SKGGSR---SRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSK 392
Query: 338 K 338
K
Sbjct: 393 K 393
Score = 48.5 bits (114), Expect = 2e-05
Identities = 65/324 (20%), Positives = 113/324 (34%), Gaps = 46/324 (14%)
Query: 456 NERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRC 515
+ R SY ++ +R +S + S S+ H++ R K + +
Sbjct: 179 SRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQS 238
Query: 516 DSADLRHDIDRRRKERSKERGDSKG-SRESSGSRKQEK-------------TPKDYKEYK 561
S + KE+S+ R S G SR S + +EK +P +K
Sbjct: 239 RSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKS 298
Query: 562 SYKDDSKHKREQDHSRSS-------------SSSASPSSPSSREEKESKKEREEEFKTHH 608
+ S+ +R ++ R S S S S S SR S+ + +++ K
Sbjct: 299 KSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRK 358
Query: 609 EMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTP 668
+E S SR R R R RG R AG++ K+ K+E+ D +
Sbjct: 359 RSREES--RSRSRSRSKSERSRKRGSKRDSKAGSS-----------KKKKKEDTDRSQSR 405
Query: 669 KSKKYFLHDDRDDGVDYWAKRGRGR----GTFQ--RGRGRFNFKKSGSSPKWTHDKYQGD 722
+ + + + GRG GT Q R R R N K + P + + +
Sbjct: 406 SPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSA 465
Query: 723 GIVEDEEETMENNEEKKDRRKEEK 746
++ + + R +
Sbjct: 466 SKTRSRSKSRSRSASRSPSRSRSR 489
Score = 47.4 bits (111), Expect = 5e-05
Identities = 74/368 (20%), Positives = 135/368 (36%), Gaps = 38/368 (10%)
Query: 265 IQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPD 324
++H+ GS G+G S Y ++ + P R+ + I + R + +
Sbjct: 67 VEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQ 126
Query: 325 GGDQETAKTGKFLKSPPLHKNLD------AREKSTFREESPLRIKMIAS---DSHRPEVK 375
G+ A K K+ + + + A EK E + +I+++ R
Sbjct: 127 AGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYS 186
Query: 376 LKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQH 435
+ +R + ++ R +S HS + + K S+S S S +
Sbjct: 187 RSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEK 246
Query: 436 IVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHST----RQKSPEIHRRIDISPSTLRK 491
S SA + ++ ++ + + + +SP H+ +
Sbjct: 247 SRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKS--------KS 298
Query: 492 HTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRR---------KERSKERGDSKG-- 540
+R +ER +EE + + R LR R R + RSK + KG
Sbjct: 299 KSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRK 358
Query: 541 -SRESSGSRKQEKTPKDYKEYKSYKDD-----SKHKREQDHSRSSSSSASPSSPSSREEK 594
SRE S SR + ++ + + K D SK K+++D RS S S S S RE
Sbjct: 359 RSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHA 418
Query: 595 ESKKEREE 602
+S+ + E
Sbjct: 419 KSESSQRE 426
Score = 46.6 bits (109), Expect = 8e-05
Identities = 52/231 (22%), Positives = 86/231 (37%), Gaps = 33/231 (14%)
Query: 505 ENQKGDKKLRCDSADLRHDIDRRRKERSKER----GDSKGSRESSGSRKQEKTPKDYKEY 560
E++ G ++ R S H R R S++ G SK S S SR + + K
Sbjct: 174 EDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSR 233
Query: 561 KSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFK-------------TH 607
+ S+ K+E+ S S S S S + + +SK + EE+ + +
Sbjct: 234 SRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSR 293
Query: 608 HEMKEYSGFAGVSR-----PRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEW 662
H+ K S R RG+ RGR + + + + + + + R + +
Sbjct: 294 HKSKSKSRSRSQERRVEEEKRGSV--SRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSK 351
Query: 663 DPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPK 713
D K +K + R R R + R RG K+GSS K
Sbjct: 352 DKR---KGRKRSREESRS------RSRSRSKSERSRKRGSKRDSKAGSSKK 393
Score = 44.3 bits (103), Expect = 4e-04
Identities = 79/350 (22%), Positives = 133/350 (38%), Gaps = 54/350 (15%)
Query: 261 HSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSS 320
+S S HS RS S SR S++S RS +++ R +SR RS
Sbjct: 185 YSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRS-------RSKSRSRS- 236
Query: 321 FYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAP 380
Q +++ K P ++EKS R S + + + D +++
Sbjct: 237 -------QSRSRSKKEKSRSP------SKEKSRSRSHSAGKSRSKSKDQAEEKIQNN--- 280
Query: 381 VPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLV 440
D+ +P S + R + + S +E+ + K S+ S+ SL
Sbjct: 281 ---DNVGKPKSRSPSRHKSKSKSRSRSQERRV----EEEKRGSVSRGRSQE-----KSLR 328
Query: 441 HHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEER 500
K + + R S K+ ++ R++S E R S S + +R G +R
Sbjct: 329 QSRSRSRSKGGSRS---RSRSRSKSKDKRKGRKRSREESRSRSRSRSKSER-SRKRGSKR 384
Query: 501 VFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDS-----KGSRESSGSRKQEKT-- 553
K + K KK D + R KER + +S +G E++G+ ++ ++
Sbjct: 385 DSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRS 444
Query: 554 -------PKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKES 596
P E +S + R + SRS S+S SPS SR S
Sbjct: 445 RSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSRSHSRS 494
Score = 43.9 bits (102), Expect = 5e-04
Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 8/55 (14%)
Query: 3 RSNSRSHS---SRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYS 54
RSNS+S S S+SRS+S+S++RSRS SR SRS SR+ SRSRSR S
Sbjct: 445 RSNSKSKPNLPSESRSRSKSASKTRSRSKSR-----SRSASRSPSRSRSRSHSRS 494
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 89.0 bits (219), Expect = 1e-17
Identities = 95/284 (33%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHS--RKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
S S + SS S S S SSR+ SRS S RKKR+S RSRS T RSR R YSR R
Sbjct: 526 STSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHS-RSRSPTIKARRSRSRSYSR--RIKI 582
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSP--RRGRSRSRSPKRRS 119
+NR + R R + RR +RSP R RSRSRS RR+
Sbjct: 583 ESNRARVKIRDRRRSNRNSIER--------------ERRRNRSPSRERRRSRSRSRDRRT 628
Query: 120 VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQ--EKQTKKAEGE-PQEE 176
+ RSRSR RR R S +S +K K+ S+ +K KK + E +E+
Sbjct: 629 NRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQ 688
Query: 177 SPLKSKSQEEPKD---TFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIA 233
K K + E KD + + D + E ++ + SG I + +D+ S S + +
Sbjct: 689 DKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDS 748
Query: 234 TPPSQSS----SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSG 273
S S S S++P S AK S S++ S +RSG
Sbjct: 749 KKHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRSVEKS-QRSG 791
Score = 52.0 bits (123), Expect = 2e-06
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 451 AAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAG----EERVFKEEN 506
A + + +R S + + E R +SP RR S S R+ R + + R ++
Sbjct: 587 ARVKIRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQR 646
Query: 507 ---------QKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDY 557
KG+ K + + ID+ RK++ KER + R+ KQ++ KD+
Sbjct: 647 GNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKE----KQKREEKDF 702
Query: 558 KEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTH 607
K + S D K KRE + + S S S S ++SKK ++ K H
Sbjct: 703 K-FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKH 751
Score = 50.4 bits (119), Expect = 6e-06
Identities = 115/578 (19%), Positives = 209/578 (36%), Gaps = 86/578 (14%)
Query: 60 DYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRS------- 112
DY++ P G G Y+Q G G P NRR S R R RS
Sbjct: 165 DYQHGAAFGPPQG--GFHPPYWQPGPP----GPPAPPQNRRERPSSFRDRQRSPIALPVK 218
Query: 113 RSPKRRSVSSQRSRSRSRRS--YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAE 170
+ P + +R+ R + R + + +S +SK+ ++K T+ AE
Sbjct: 219 QEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKK---EKKATEDAE 275
Query: 171 GEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPS 230
G P +SK F+ D E D N +A+SG + S P+ HS
Sbjct: 276 GGDGPRLPQRSK--------FDSDEEEE-DTENVEAASSGKVTRSPSPV---PQEEHSDP 323
Query: 231 PIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNS 290
+ + ML T T + + + +
Sbjct: 324 EMTEEEKEYQMMLLTKMLLTEILLDVTDEEIYYVAKDA---------------------- 361
Query: 291 PIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPP-----LHKN 345
H + ++PAK +A +A + GD E ++ + +S L
Sbjct: 362 ---HRKATKAPAKQLAQSSALASLTGLGGLGGYGSGDSEDERSDRGSESSDTDDEELRHR 418
Query: 346 LDAREKSTFREESPLRI---KMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTL 402
+ ++++ +R+E ++ K + + + E K + SL + R +
Sbjct: 419 IRQKQEAFWRKEKEQQLLHDKQMEEEKQQTERVTKEMNEFIHKEQNSLSLLEAREADGDV 478
Query: 403 VHSVKKE-QEFRSIFD----HIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNE 457
V+ K+ E S+ + H + + +S S S S S + T++
Sbjct: 479 VNEKKRTPNETTSVLEPKKEHKEKEKQGRSRSGSSSSGSSS-----SNSRTSSTSSTVSS 533
Query: 458 RFTSYQKATEEHSTRQKSPEIHRRIDIS--PSTLRKHTRLAGEERVFKEENQKGDKKLRC 515
S + S+R SP+ +R S P+ + +R R K E+ + K+R
Sbjct: 534 SSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIR- 592
Query: 516 DSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKT-PKDYKEYKSYKDDSKHKREQD 574
DRRR R+ + + +R S R++ ++ +D + ++ + S+ +R+ D
Sbjct: 593 ---------DRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKID 643
Query: 575 HSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKE 612
R + S S +E+E KKER + K+
Sbjct: 644 DQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKD 681
Score = 47.8 bits (112), Expect = 4e-05
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
G + SH + +++ Q + RSRS + ++ + R R + + + + +D++
Sbjct: 647 GNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSS 706
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR--S 119
+++R R+ R + R G V RH +S ++ K+ S
Sbjct: 707 QDDRLKRKRESER------------TFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGS 754
Query: 120 VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTK 167
SS RS S S S + ++ + SRS S KS S ++ S++ ++K
Sbjct: 755 DSSGRSSSESPGSSKEKKAKKPKHSRSRS-VEKSQRSGKKASRKHKSK 801
Score = 45.8 bits (107), Expect = 1e-04
Identities = 53/226 (23%), Positives = 85/226 (37%), Gaps = 19/226 (8%)
Query: 541 SRESSGSRKQEK--TPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKK 598
+RE+ G EK TP + K + K K +Q SRS SSS+ SS +SR S
Sbjct: 471 AREADGDVVNEKKRTPNETTSVLEPKKEHKEKEKQGRSRSGSSSSGSSSSNSRTSSTSST 530
Query: 599 EREEEFKTHHEMKEYSGFAGV-------SRPRGTFF---RIRGRGRARGVFAGTNTG--- 645
+ + S + SR R R R R +R + +N
Sbjct: 531 VSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVK 590
Query: 646 ---PNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGR 702
SN +R + P + + D R + R R + QRG
Sbjct: 591 IRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLS 650
Query: 703 FN-FKKSGSSPKWTHDKYQGDGIVEDEEETMENNEEKKDRRKEEKE 747
N K G + + K + I +D ++ + E ++D+RKE+++
Sbjct: 651 GNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQK 696
Score = 45.8 bits (107), Expect = 1e-04
Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 23/209 (11%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
R++ R++S S+ RSRSRS R R+ SRSRSRDR D R +
Sbjct: 599 RNSIERERRRNRSPSRERRRSRSRSRDR--------RTNRASRSRSRDRRKIDDQRGNLS 650
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRG---GYRPVWNRRHSRSPRRGRSRSRSPKRRS 119
N ++ +G Q R + R +R + R K
Sbjct: 651 GN-------SHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFK 703
Query: 120 VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKR---RGSQEKQTKKAEGEPQEE 176
SSQ R + +R + S S S + SK+ + S++ + G E
Sbjct: 704 FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSSGRSSSE 763
Query: 177 SPLKSKSQEEPKDTFEHDPSESIDEFNKS 205
SP SK ++ K +H S S+++ +S
Sbjct: 764 SPGSSKEKKAKKP--KHSRSRSVEKSQRS 790
Score = 45.1 bits (105), Expect = 2e-04
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 470 STRQKSPEIHRRIDISPSTL----RKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDID 525
++R +S + R+ID L KH A E+ KE ++ DK + + + D
Sbjct: 631 ASRSRSRD-RRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQD 689
Query: 526 RRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSY---------KDDSKHKREQD-- 574
+R++++ +E D K S + +++ ++ + + S + DSK +D
Sbjct: 690 KRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSK 749
Query: 575 -HSRSSSSSASPS-SPSSREEKESKKEREEEFKT 606
HS S SS S S SP S +EK++KK + ++
Sbjct: 750 KHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRS 783
Score = 43.5 bits (101), Expect = 7e-04
Identities = 103/473 (21%), Positives = 160/473 (33%), Gaps = 63/473 (13%)
Query: 133 YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFE 192
Y S S S R S R ++KQ E +E+ L K EE K E
Sbjct: 391 YGSGDSEDERSDRGSESSDTDDEELRHRIRQKQEAFWRKE-KEQQLLHDKQMEEEKQQTE 449
Query: 193 HDPSESIDEFNKSSATSGDIWPGLSA----YDNSPRSPHSPSPIATPPSQSSSCSDAPML 248
E ++EF S + A + R+P+ + + P +
Sbjct: 450 RVTKE-MNEFIHKEQNSLSLLEAREADGDVVNEKKRTPNETTSVLEPKKEHKEKEKQGRS 508
Query: 249 STVHSAKNTPSQHSH-SIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAP 307
+ S+ + S +S S S S S S +GSSR S +SP RS + TI
Sbjct: 509 RSGSSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTI-- 566
Query: 308 QNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPLRIKMIAS 367
A R SR S ++ K +S N ++ E+ R SP R
Sbjct: 567 -KARRSRSRSYSRRIKIESNRARVKIRDRRRS-----NRNSIERERRRNRSPSR------ 614
Query: 368 DSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKS 427
+ R S ++DR T S + ++ R I D Q
Sbjct: 615 -----------------ERRRSRSRSRDR---RTNRASRSRSRDRRKIDD-----QRGNL 649
Query: 428 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 487
+ S + K++ +S ++ ++ ++ +QK E +
Sbjct: 650 SGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDD 709
Query: 488 TLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGS 547
L++ ER F K +R HD + K +S + K S S
Sbjct: 710 RLKRKRE---SERTFSRSGSISVKIIR-------HDSRQDSK-KSTTKDSKKHSGSDSSG 758
Query: 548 RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER 600
R ++P KE K+ K KH R SRS S +SR+ K + R
Sbjct: 759 RSSSESPGSSKEKKAKK--PKHSR----SRSVEKSQRSGKKASRKHKSKSRSR 805
Score = 34.3 bits (77), Expect = 0.43
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSR 49
GRS+S S S + +++ SRSRS + +R ++ + S+SRSR
Sbjct: 758 GRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRSR 805
Score = 31.6 bits (70), Expect = 2.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 5 NSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRN 63
+S+ HS S S +SSS S S +K + SRSR+ +S+ + SR ++ R+
Sbjct: 747 DSKKHSG-SDSSGRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRS 804
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 89.0 bits (219), Expect = 1e-17
Identities = 95/284 (33%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHS--RKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
S S + SS S S S SSR+ SRS S RKKR+S RSRS T RSR R YSR R
Sbjct: 526 STSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHS-RSRSPTIKARRSRSRSYSR--RIKI 582
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSP--RRGRSRSRSPKRRS 119
+NR + R R + RR +RSP R RSRSRS RR+
Sbjct: 583 ESNRARVKIRDRRRSNRNSIER--------------ERRRNRSPSRERRRSRSRSRDRRT 628
Query: 120 VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQ--EKQTKKAEGE-PQEE 176
+ RSRSR RR R S +S +K K+ S+ +K KK + E +E+
Sbjct: 629 NRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQ 688
Query: 177 SPLKSKSQEEPKD---TFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIA 233
K K + E KD + + D + E ++ + SG I + +D+ S S + +
Sbjct: 689 DKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDS 748
Query: 234 TPPSQSS----SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSG 273
S S S S++P S AK S S++ S +RSG
Sbjct: 749 KKHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRSVEKS-QRSG 791
Score = 52.0 bits (123), Expect = 2e-06
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 451 AAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAG----EERVFKEEN 506
A + + +R S + + E R +SP RR S S R+ R + + R ++
Sbjct: 587 ARVKIRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQR 646
Query: 507 ---------QKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDY 557
KG+ K + + ID+ RK++ KER + R+ KQ++ KD+
Sbjct: 647 GNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKE----KQKREEKDF 702
Query: 558 KEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTH 607
K + S D K KRE + + S S S S ++SKK ++ K H
Sbjct: 703 K-FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKH 751
Score = 50.4 bits (119), Expect = 6e-06
Identities = 115/578 (19%), Positives = 209/578 (36%), Gaps = 86/578 (14%)
Query: 60 DYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRS------- 112
DY++ P G G Y+Q G G P NRR S R R RS
Sbjct: 165 DYQHGAAFGPPQG--GFHPPYWQPGPP----GPPAPPQNRRERPSSFRDRQRSPIALPVK 218
Query: 113 RSPKRRSVSSQRSRSRSRRS--YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAE 170
+ P + +R+ R + R + + +S +SK+ ++K T+ AE
Sbjct: 219 QEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKK---EKKATEDAE 275
Query: 171 GEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPS 230
G P +SK F+ D E D N +A+SG + S P+ HS
Sbjct: 276 GGDGPRLPQRSK--------FDSDEEEE-DTENVEAASSGKVTRSPSPV---PQEEHSDP 323
Query: 231 PIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNS 290
+ + ML T T + + + +
Sbjct: 324 EMTEEEKEYQMMLLTKMLLTEILLDVTDEEIYYVAKDA---------------------- 361
Query: 291 PIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPP-----LHKN 345
H + ++PAK +A +A + GD E ++ + +S L
Sbjct: 362 ---HRKATKAPAKQLAQSSALASLTGLGGLGGYGSGDSEDERSDRGSESSDTDDEELRHR 418
Query: 346 LDAREKSTFREESPLRI---KMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTL 402
+ ++++ +R+E ++ K + + + E K + SL + R +
Sbjct: 419 IRQKQEAFWRKEKEQQLLHDKQMEEEKQQTERVTKEMNEFIHKEQNSLSLLEAREADGDV 478
Query: 403 VHSVKKE-QEFRSIFD----HIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNE 457
V+ K+ E S+ + H + + +S S S S S + T++
Sbjct: 479 VNEKKRTPNETTSVLEPKKEHKEKEKQGRSRSGSSSSGSSS-----SNSRTSSTSSTVSS 533
Query: 458 RFTSYQKATEEHSTRQKSPEIHRRIDIS--PSTLRKHTRLAGEERVFKEENQKGDKKLRC 515
S + S+R SP+ +R S P+ + +R R K E+ + K+R
Sbjct: 534 SSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIR- 592
Query: 516 DSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKT-PKDYKEYKSYKDDSKHKREQD 574
DRRR R+ + + +R S R++ ++ +D + ++ + S+ +R+ D
Sbjct: 593 ---------DRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKID 643
Query: 575 HSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKE 612
R + S S +E+E KKER + K+
Sbjct: 644 DQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKD 681
Score = 47.8 bits (112), Expect = 4e-05
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
G + SH + +++ Q + RSRS + ++ + R R + + + + +D++
Sbjct: 647 GNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSS 706
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR--S 119
+++R R+ R + R G V RH +S ++ K+ S
Sbjct: 707 QDDRLKRKRESER------------TFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGS 754
Query: 120 VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTK 167
SS RS S S S + ++ + SRS S KS S ++ S++ ++K
Sbjct: 755 DSSGRSSSESPGSSKEKKAKKPKHSRSRS-VEKSQRSGKKASRKHKSK 801
Score = 45.8 bits (107), Expect = 1e-04
Identities = 53/226 (23%), Positives = 85/226 (37%), Gaps = 19/226 (8%)
Query: 541 SRESSGSRKQEK--TPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKK 598
+RE+ G EK TP + K + K K +Q SRS SSS+ SS +SR S
Sbjct: 471 AREADGDVVNEKKRTPNETTSVLEPKKEHKEKEKQGRSRSGSSSSGSSSSNSRTSSTSST 530
Query: 599 EREEEFKTHHEMKEYSGFAGV-------SRPRGTFF---RIRGRGRARGVFAGTNTG--- 645
+ + S + SR R R R R +R + +N
Sbjct: 531 VSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVK 590
Query: 646 ---PNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGR 702
SN +R + P + + D R + R R + QRG
Sbjct: 591 IRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLS 650
Query: 703 FN-FKKSGSSPKWTHDKYQGDGIVEDEEETMENNEEKKDRRKEEKE 747
N K G + + K + I +D ++ + E ++D+RKE+++
Sbjct: 651 GNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQK 696
Score = 45.8 bits (107), Expect = 1e-04
Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 23/209 (11%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
R++ R++S S+ RSRSRS R R+ SRSRSRDR D R +
Sbjct: 599 RNSIERERRRNRSPSRERRRSRSRSRDR--------RTNRASRSRSRDRRKIDDQRGNLS 650
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRG---GYRPVWNRRHSRSPRRGRSRSRSPKRRS 119
N ++ +G Q R + R +R + R K
Sbjct: 651 GN-------SHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFK 703
Query: 120 VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKR---RGSQEKQTKKAEGEPQEE 176
SSQ R + +R + S S S + SK+ + S++ + G E
Sbjct: 704 FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSSGRSSSE 763
Query: 177 SPLKSKSQEEPKDTFEHDPSESIDEFNKS 205
SP SK ++ K +H S S+++ +S
Sbjct: 764 SPGSSKEKKAKKP--KHSRSRSVEKSQRS 790
Score = 45.1 bits (105), Expect = 2e-04
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 470 STRQKSPEIHRRIDISPSTL----RKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDID 525
++R +S + R+ID L KH A E+ KE ++ DK + + + D
Sbjct: 631 ASRSRSRD-RRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQD 689
Query: 526 RRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSY---------KDDSKHKREQD-- 574
+R++++ +E D K S + +++ ++ + + S + DSK +D
Sbjct: 690 KRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSK 749
Query: 575 -HSRSSSSSASPS-SPSSREEKESKKEREEEFKT 606
HS S SS S S SP S +EK++KK + ++
Sbjct: 750 KHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRS 783
Score = 43.5 bits (101), Expect = 7e-04
Identities = 103/473 (21%), Positives = 160/473 (33%), Gaps = 63/473 (13%)
Query: 133 YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFE 192
Y S S S R S R ++KQ E +E+ L K EE K E
Sbjct: 391 YGSGDSEDERSDRGSESSDTDDEELRHRIRQKQEAFWRKE-KEQQLLHDKQMEEEKQQTE 449
Query: 193 HDPSESIDEFNKSSATSGDIWPGLSA----YDNSPRSPHSPSPIATPPSQSSSCSDAPML 248
E ++EF S + A + R+P+ + + P +
Sbjct: 450 RVTKE-MNEFIHKEQNSLSLLEAREADGDVVNEKKRTPNETTSVLEPKKEHKEKEKQGRS 508
Query: 249 STVHSAKNTPSQHSH-SIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAP 307
+ S+ + S +S S S S S S +GSSR S +SP RS + TI
Sbjct: 509 RSGSSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTI-- 566
Query: 308 QNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPLRIKMIAS 367
A R SR S ++ K +S N ++ E+ R SP R
Sbjct: 567 -KARRSRSRSYSRRIKIESNRARVKIRDRRRS-----NRNSIERERRRNRSPSR------ 614
Query: 368 DSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKS 427
+ R S ++DR T S + ++ R I D Q
Sbjct: 615 -----------------ERRRSRSRSRDR---RTNRASRSRSRDRRKIDD-----QRGNL 649
Query: 428 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 487
+ S + K++ +S ++ ++ ++ +QK E +
Sbjct: 650 SGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDD 709
Query: 488 TLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGS 547
L++ ER F K +R HD + K +S + K S S
Sbjct: 710 RLKRKRE---SERTFSRSGSISVKIIR-------HDSRQDSK-KSTTKDSKKHSGSDSSG 758
Query: 548 RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER 600
R ++P KE K+ K KH R SRS S +SR+ K + R
Sbjct: 759 RSSSESPGSSKEKKAKK--PKHSR----SRSVEKSQRSGKKASRKHKSKSRSR 805
Score = 34.3 bits (77), Expect = 0.43
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSR 49
GRS+S S S + +++ SRSRS + +R ++ + S+SRSR
Sbjct: 758 GRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRSR 805
Score = 31.6 bits (70), Expect = 2.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 5 NSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRN 63
+S+ HS S S +SSS S S +K + SRSR+ +S+ + SR ++ R+
Sbjct: 747 DSKKHSG-SDSSGRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRS 804
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 88.6 bits (218), Expect = 2e-17
Identities = 85/224 (37%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKR----YSS----RSRSRTYSRSRSRDRMYS 54
R +S S SS S SR+ SSSRS SRS SR +R Y S RSRSR++SRSRSR R YS
Sbjct: 375 RRSSSSSSSSSASRT-SSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSRSRSRRYS 433
Query: 55 RDYRRDYRNNRG-------------MRRPYGYRGRGRGYYQGGGGRYHRGG--------- 92
R R R++ G R YG R R R G RY RGG
Sbjct: 434 RSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSRS-RSHSGDRYRRGGRGLRHHSSS 492
Query: 93 -YRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSR-SSSPY 150
R W+ SRS RSRS SP S S RSRSRSR S R +R ++SP
Sbjct: 493 RSRSSWSLSPSRSRSLTRSRSHSP---SPSQSRSRSRSRSQSPSPSPAREKLTRPAASPA 549
Query: 151 SKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHD 194
+ K + K+T A+ + + LK + Q+ F+ D
Sbjct: 550 VGEKLKKTEPAAGKETGAAKPKLTPQEKLKLRMQKALNRQFKAD 593
Score = 56.2 bits (134), Expect = 1e-07
Identities = 108/487 (22%), Positives = 187/487 (38%), Gaps = 84/487 (17%)
Query: 110 SRSRSPKRRSVSSQRSRSRSRRSYRSSR------SPRSSSSRSSSPYSKSPVSKRRGSQE 163
+++ ++ S +RSR R RR +R R SP S + R S Y S S E
Sbjct: 252 AKALEEEKAMYSGRRSR-RQRREFREKRLRGRKISPPSYARRDSPTYDPYKRSPSESSSE 310
Query: 164 KQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSP 223
+++ P E K TF S DE ++A + + +P
Sbjct: 311 SRSRSRSPTPGREE----------KITFITSFGGS-DEEAAAAAAAAAASGVTTGKPPAP 359
Query: 224 RSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSR 283
P P+P ++ S S S+ SA T S S S S R G G +G
Sbjct: 360 PQPGGPAPGRNASARRRSSSS----SSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHA 415
Query: 284 YSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLH 343
S S++ SRR R SRGR + GG ++ + + +SP
Sbjct: 416 RSRSRSWSRSRSRSRRYS----------RSRSRGRR--HSGGGSRDGHR---YSRSPARR 460
Query: 344 KNLDAREKSTFREESPLRIK-----MIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLL 398
R +S R S R + + S R ++P +R SLT+ R
Sbjct: 461 GGYGPRRRSRSRSHSGDRYRRGGRGLRHHSSSRSRSSWSLSP------SRSRSLTRSR-- 512
Query: 399 ASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAM-TLNE 457
H P S+S S S Q +E+ + AA + E
Sbjct: 513 ------------------SHSPSPSQSRSRSRSRSQS--PSPSPAREKLTRPAASPAVGE 552
Query: 458 RFTSYQKATEEHSTRQK---SPEIHRRIDISPSTLR--KHTRLAGEERVFKEENQKGDKK 512
+ + A + + K +P+ ++ + + R K + A +E++ ++E+++ +++
Sbjct: 553 KLKKTEPAAGKETGAAKPKLTPQEKLKLRMQKALNRQFKADKKAAQEKMIQQEHERQERE 612
Query: 513 --LRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHK 570
LR + +R +R R+E+ +E + + SR+S + +P+ +EY S + S+ +
Sbjct: 613 DELRAMARKIRMK-ERERREKEREEWERQYSRQS-----RSPSPRYSREYSSSRRRSRSR 666
Query: 571 REQDHSR 577
H R
Sbjct: 667 SRSPHYR 673
Score = 39.7 bits (91), Expect = 0.010
Identities = 49/182 (26%), Positives = 68/182 (37%), Gaps = 35/182 (19%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHS---RKKRYSSRSRSRTYSRSRSRDRM-------- 52
S+SRS SS S S S+S S +RSRSHS + R SRSRS++ S S +R+++
Sbjct: 490 SSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQSPSPSPAREKLTRPAASPA 549
Query: 53 ----------------------YSRDYRRDYRNNRGMRRPY--GYRGRGRGYYQGGGGRY 88
+ + R + + R + + Q R
Sbjct: 550 VGEKLKKTEPAAGKETGAAKPKLTPQEKLKLRMQKALNRQFKADKKAAQEKMIQQEHERQ 609
Query: 89 HRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSS 148
R R+ R R + R R S Q R S S S R S SRS S
Sbjct: 610 EREDELRAMARKIRMKERERREKEREEWERQYSRQSRSPSPRYSREYSSSRRRSRSRSRS 669
Query: 149 PY 150
P+
Sbjct: 670 PH 671
Score = 32.0 bits (71), Expect = 2.2
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSR 55
R+ +R + + R + R +SR+ R S SR YS SR R R SR
Sbjct: 616 RAMARKIRMKERERREKEREEWERQYSRQSRSPSPRYSREYSSSRRRSRSRSR 668
Score = 30.0 bits (66), Expect = 8.2
Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 11/139 (7%)
Query: 459 FTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEE--RVFKEENQKGDKKLRCD 516
+ S + A + +S RR S S R+H+ + R + ++G R
Sbjct: 409 YRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRR 468
Query: 517 SADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKRE--QD 574
S H DR R+ +G R S SR + +S H Q
Sbjct: 469 SRSRSHSGDRYRR-------GGRGLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQS 521
Query: 575 HSRSSSSSASPSSPSSREE 593
SRS S S SPS +RE+
Sbjct: 522 RSRSRSRSQSPSPSPAREK 540
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 85.5 bits (210), Expect = 2e-16
Identities = 89/334 (26%), Positives = 135/334 (40%), Gaps = 52/334 (15%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
G+SN R RS+S ++S SRS S+SHSR+KR S+ RSR+++RSRSR
Sbjct: 298 GKSNERK-GGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQ----------- 345
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
++ R + P+ R + R R +R HSR R+ K R
Sbjct: 346 KDRRRSKSPHKKRSKSR-------------ERRKSRSRSHSRDKRKDTREKIKEKERVKE 392
Query: 122 SQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKS 181
R + R R R R + K + +E++ +K + +++ K
Sbjct: 393 KDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKE--KE 450
Query: 182 KSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSS 241
K Q++ K+ E D S+ IDE K S P S Y+ S RS S S+SSS
Sbjct: 451 KEQDKEKER-EKDRSKEIDEKRKKDKKSRT--PPRS-YNASRRSRSSSRERRRRRSRSSS 506
Query: 242 CSDAPMLSTVHSAKNTPSQHSHS------------IQHSPERSGSGSVGNGSS------- 282
S + + +PS S + I ER S S+ S+
Sbjct: 507 RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEK 566
Query: 283 --RYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDE 314
+ S S H+ S +K + ++APR E
Sbjct: 567 LEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTE 600
Score = 52.4 bits (124), Expect = 2e-06
Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 30/297 (10%)
Query: 463 QKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRH 522
+ +++ HS R++S HR + S R+ R + K + +K R S
Sbjct: 317 RSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK 376
Query: 523 DIDRRRKERSKER---GDSKGSRESSGSRKQEK---------TPKDYKEYKSYKDDSKHK 570
D R K + KER D + RE R++EK ++ K + D + +
Sbjct: 377 RKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERE 436
Query: 571 REQDHSRSSSSSASPSSPSSRE-EKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRI 629
RE++H + +E EK+ KE +E+ K + + SR + R
Sbjct: 437 REKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRE 496
Query: 630 RGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKR 689
R R R+R ++ P S T +K + P ++KK + D + +R
Sbjct: 497 RRRRRSR----SSSRSPRTSKTIKRKSSR----SPSPRSRNKKDKKREKERDHIS--ERR 546
Query: 690 GRGRGTFQRGR-----GRFNFKKSGSSPKWTHDKYQGDGIV--EDEEETMENNEEKK 739
R R T R G+ +K+ +S K + D V E +++ EE K
Sbjct: 547 ERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENK 603
Score = 48.9 bits (115), Expect = 2e-05
Identities = 60/267 (22%), Positives = 101/267 (37%), Gaps = 15/267 (5%)
Query: 348 AREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVK 407
+ E+ R S R K +S K + NR S KDR + +
Sbjct: 300 SNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRS 359
Query: 408 KEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATE 467
K +E R K T E + VKE+ + ER +K
Sbjct: 360 KSRERRKSRSRSHSRDKRKDTREKIKEK-----ERVKEKDREKEREREKER--EKEKERG 412
Query: 468 EHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRR 527
++ R K E R D R+ + ++R ++E ++ +K R D +ID +
Sbjct: 413 KNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKER--EKDRSKEIDEK 470
Query: 528 RKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSS 587
RK+ K R R + SR+ + ++ + +S + + R SS S S
Sbjct: 471 RKKDKKSR---TPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS---PS 524
Query: 588 PSSREEKESKKEREEEFKTHHEMKEYS 614
P SR +K+ K+E+E + + +E S
Sbjct: 525 PRSRNKKDKKREKERDHISERRERERS 551
Score = 48.1 bits (113), Expect = 3e-05
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 95 PVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSP 154
P + + R R RS +RS R S S R RS+ +RS RS S + SKSP
Sbjct: 295 PESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSP 354
Query: 155 VSKRRGSQEKQTKKAEGEPQEE-----SPLKSKSQEEPKDTFEHDPSESIDEFNKSSATS 209
KR S+E++ ++ +++ +K K + + KD + E E K +
Sbjct: 355 HKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKN 414
Query: 210 GD 211
D
Sbjct: 415 KD 416
Score = 45.8 bits (107), Expect = 1e-04
Identities = 83/402 (20%), Positives = 153/402 (38%), Gaps = 46/402 (11%)
Query: 215 GLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGS 274
G+ D + HS + I PP + + + + + S S +I+ PE S
Sbjct: 243 GVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIE--PESGKS 300
Query: 275 GSVGNGSSRY---SPSQNSPIHHIPSRRSPAKTIA-----PQNAPRDESRGRSSFYPDGG 326
G SR S S++S H +RS +K + ++ +D R +S
Sbjct: 301 NERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSK 360
Query: 327 DQETAKTGKFLKSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDS 386
+E K+ +S K D REK +E+ ++ K + R + + K +
Sbjct: 361 SRERRKSRS--RSHSRDKRKDTREK--IKEKERVKEKDREKEREREKEREK-------EK 409
Query: 387 NRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQ 446
R + +D+ +K++E +H K K + +++
Sbjct: 410 ERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQD-----------KEKE 458
Query: 447 YFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEEN 506
K + ++E+ +K ++ T +S RR S S R+ R R +
Sbjct: 459 REKDRSKEIDEK----RKKDKKSRTPPRSYNASRR-SRSSSRERRRRRSRSSSRSPRTSK 513
Query: 507 QKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDD 566
K R S R+ D++R E+ ++ + RE S S ++ +D KE + +
Sbjct: 514 TIKRKSSRSPSPRSRNKKDKKR-EKERDHISERRERERSTSMRKSSNDRDGKE--KLEKN 570
Query: 567 SKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHH 608
S +E++H++ P S S+E + R EE K H
Sbjct: 571 STSLKEKEHNKE------PDSSVSKEVDDKDAPRTEENKIQH 606
Score = 37.4 bits (85), Expect = 0.051
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 37/211 (17%)
Query: 537 DSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKES 596
+S S E G R + T K S K S+ KR Q RS S + S S ++ + S
Sbjct: 296 ESGKSNERKGGRSRSHTRS--KSRSSSKSHSRRKRSQSKHRSRSHNRSRS--RQKDRRRS 351
Query: 597 KKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKR 656
K ++ K+ K S + + T +I+ + R + + R
Sbjct: 352 KSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKE----------------KDR 395
Query: 657 PKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTH 716
KE E + E K K+ + DRD +R + R K+ +
Sbjct: 396 EKEREREKE-REKEKERGKNKDRDK---------------EREKDREKDKEK-DRERERE 438
Query: 717 DKYQGDGIVEDEEETMENNEEKKDRRKEEKE 747
+++ D E E+E + E +KDR KE E
Sbjct: 439 KEHEKDRDKEKEKEQDKEKEREKDRSKEIDE 469
Score = 35.4 bits (80), Expect = 0.19
Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 20/152 (13%)
Query: 464 KATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHD 523
K EE R + + I P + + + R G R + K
Sbjct: 273 KELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSH--------- 323
Query: 524 IDRRRKERSKERGDSKG-SRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSS 582
RR++ +SK R S SR R++ K+P K +R + SRS S
Sbjct: 324 -SRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHK-------KRSKSRERRKSRSRSHSRD 375
Query: 583 ASPSSPSSREEKE--SKKEREEEFKTHHEMKE 612
+ +EKE +K+RE+E + E ++
Sbjct: 376 KRKDTREKIKEKERVKEKDREKEREREKEREK 407
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 85.5 bits (210), Expect = 2e-16
Identities = 89/334 (26%), Positives = 135/334 (40%), Gaps = 52/334 (15%)
Query: 2 GRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
G+SN R RS+S ++S SRS S+SHSR+KR S+ RSR+++RSRSR
Sbjct: 182 GKSNERK-GGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQ----------- 229
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
++ R + P+ R + R R +R HSR R+ K R
Sbjct: 230 KDRRRSKSPHKKRSKSR-------------ERRKSRSRSHSRDKRKDTREKIKEKERVKE 276
Query: 122 SQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKS 181
R + R R R R + K + +E++ +K + +++ K
Sbjct: 277 KDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKE--KE 334
Query: 182 KSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSS 241
K Q++ K+ E D S+ IDE K S P S Y+ S RS S S+SSS
Sbjct: 335 KEQDKEKER-EKDRSKEIDEKRKKDKKSRT--PPRS-YNASRRSRSSSRERRRRRSRSSS 390
Query: 242 CSDAPMLSTVHSAKNTPSQHSHS------------IQHSPERSGSGSVGNGSS------- 282
S + + +PS S + I ER S S+ S+
Sbjct: 391 RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEK 450
Query: 283 --RYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDE 314
+ S S H+ S +K + ++APR E
Sbjct: 451 LEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTE 484
Score = 52.4 bits (124), Expect = 2e-06
Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 30/297 (10%)
Query: 463 QKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRH 522
+ +++ HS R++S HR + S R+ R + K + +K R S
Sbjct: 201 RSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDK 260
Query: 523 DIDRRRKERSKER---GDSKGSRESSGSRKQEK---------TPKDYKEYKSYKDDSKHK 570
D R K + KER D + RE R++EK ++ K + D + +
Sbjct: 261 RKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERE 320
Query: 571 REQDHSRSSSSSASPSSPSSRE-EKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRI 629
RE++H + +E EK+ KE +E+ K + + SR + R
Sbjct: 321 REKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRE 380
Query: 630 RGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKR 689
R R R+R ++ P S T +K + P ++KK + D + +R
Sbjct: 381 RRRRRSR----SSSRSPRTSKTIKRKSSR----SPSPRSRNKKDKKREKERDHIS--ERR 430
Query: 690 GRGRGTFQRGR-----GRFNFKKSGSSPKWTHDKYQGDGIV--EDEEETMENNEEKK 739
R R T R G+ +K+ +S K + D V E +++ EE K
Sbjct: 431 ERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENK 487
Score = 48.9 bits (115), Expect = 2e-05
Identities = 60/267 (22%), Positives = 101/267 (37%), Gaps = 15/267 (5%)
Query: 348 AREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVK 407
+ E+ R S R K +S K + NR S KDR + +
Sbjct: 184 SNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRS 243
Query: 408 KEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATE 467
K +E R K T E + VKE+ + ER +K
Sbjct: 244 KSRERRKSRSRSHSRDKRKDTREKIKEK-----ERVKEKDREKEREREKER--EKEKERG 296
Query: 468 EHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRR 527
++ R K E R D R+ + ++R ++E ++ +K R D +ID +
Sbjct: 297 KNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKER--EKDRSKEIDEK 354
Query: 528 RKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSS 587
RK+ K R R + SR+ + ++ + +S + + R SS S S
Sbjct: 355 RKKDKKSR---TPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS---PS 408
Query: 588 PSSREEKESKKEREEEFKTHHEMKEYS 614
P SR +K+ K+E+E + + +E S
Sbjct: 409 PRSRNKKDKKREKERDHISERRERERS 435
Score = 48.1 bits (113), Expect = 3e-05
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 95 PVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSP 154
P + + R R RS +RS R S S R RS+ +RS RS S + SKSP
Sbjct: 179 PESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSP 238
Query: 155 VSKRRGSQEKQTKKAEGEPQEE-----SPLKSKSQEEPKDTFEHDPSESIDEFNKSSATS 209
KR S+E++ ++ +++ +K K + + KD + E E K +
Sbjct: 239 HKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKN 298
Query: 210 GD 211
D
Sbjct: 299 KD 300
Score = 45.8 bits (107), Expect = 1e-04
Identities = 83/402 (20%), Positives = 153/402 (38%), Gaps = 46/402 (11%)
Query: 215 GLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGS 274
G+ D + HS + I PP + + + + + S S +I+ PE S
Sbjct: 127 GVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIE--PESGKS 184
Query: 275 GSVGNGSSRY---SPSQNSPIHHIPSRRSPAKTIA-----PQNAPRDESRGRSSFYPDGG 326
G SR S S++S H +RS +K + ++ +D R +S
Sbjct: 185 NERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSK 244
Query: 327 DQETAKTGKFLKSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDS 386
+E K+ +S K D REK +E+ ++ K + R + + K +
Sbjct: 245 SRERRKSRS--RSHSRDKRKDTREK--IKEKERVKEKDREKEREREKEREK-------EK 293
Query: 387 NRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQ 446
R + +D+ +K++E +H K K + +++
Sbjct: 294 ERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQD-----------KEKE 342
Query: 447 YFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEEN 506
K + ++E+ +K ++ T +S RR S S R+ R R +
Sbjct: 343 REKDRSKEIDEK----RKKDKKSRTPPRSYNASRR-SRSSSRERRRRRSRSSSRSPRTSK 397
Query: 507 QKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDD 566
K R S R+ D++R E+ ++ + RE S S ++ +D KE + +
Sbjct: 398 TIKRKSSRSPSPRSRNKKDKKR-EKERDHISERRERERSTSMRKSSNDRDGKE--KLEKN 454
Query: 567 SKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHH 608
S +E++H++ P S S+E + R EE K H
Sbjct: 455 STSLKEKEHNKE------PDSSVSKEVDDKDAPRTEENKIQH 490
Score = 37.4 bits (85), Expect = 0.051
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 37/211 (17%)
Query: 537 DSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKES 596
+S S E G R + T K S K S+ KR Q RS S + S S ++ + S
Sbjct: 180 ESGKSNERKGGRSRSHTRS--KSRSSSKSHSRRKRSQSKHRSRSHNRSRS--RQKDRRRS 235
Query: 597 KKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKR 656
K ++ K+ K S + + T +I+ + R + + R
Sbjct: 236 KSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKE----------------KDR 279
Query: 657 PKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTH 716
KE E + E K K+ + DRD +R + R K+ +
Sbjct: 280 EKEREREKE-REKEKERGKNKDRDK---------------EREKDREKDKEK-DRERERE 322
Query: 717 DKYQGDGIVEDEEETMENNEEKKDRRKEEKE 747
+++ D E E+E + E +KDR KE E
Sbjct: 323 KEHEKDRDKEKEKEQDKEKEREKDRSKEIDE 353
Score = 35.4 bits (80), Expect = 0.19
Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 20/152 (13%)
Query: 464 KATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHD 523
K EE R + + I P + + + R G R + K
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSH--------- 207
Query: 524 IDRRRKERSKERGDSKG-SRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSS 582
RR++ +SK R S SR R++ K+P K +R + SRS S
Sbjct: 208 -SRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHK-------KRSKSRERRKSRSRSHSRD 259
Query: 583 ASPSSPSSREEKE--SKKEREEEFKTHHEMKE 612
+ +EKE +K+RE+E + E ++
Sbjct: 260 KRKDTREKIKEKERVKEKDREKEREREKEREK 291
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 80.9 bits (198), Expect = 4e-15
Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 26/241 (10%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
+ R HS RS+SRS+ R R+ S SR +R SRSR R++S+SRSR R S RR +
Sbjct: 242 KEEKRRHS-RSRSRSR---RRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHS 297
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSS 122
RG R + R + + ++ S++P + S +R + RS S
Sbjct: 298 RERGRRSRSTSKTRDK--------------KKEDKEKKRSKTPPKSYSTAR--RSRSASR 341
Query: 123 QRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSK 182
+R R RSR RS + PRS + S+SP S RR +EK+ K + ++E +
Sbjct: 342 ERRRRRSRSGTRSPKKPRSPKRK----LSRSP-SPRRHKKEKKKDKDKERSRDERERSTS 396
Query: 183 SQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSC 242
+++ KD E D + + D YD+ PI T ++ C
Sbjct: 397 KKKKSKDK-EKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKEC 455
Query: 243 S 243
S
Sbjct: 456 S 456
Score = 51.2 bits (121), Expect = 3e-06
Identities = 66/302 (21%), Positives = 118/302 (39%), Gaps = 21/302 (6%)
Query: 372 PEVKLKMAPVPLDDSN-RPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSE 430
P + +A + L +N SL D+LL L+ +V + + + + P TS
Sbjct: 161 PTLDPALAALGLPGANLNSQSLAADQLLK--LMSTV--DPKLNHVAAGLVSPSLKSDTSS 216
Query: 431 SFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLR 490
I+ + V Q SAA+ ++ K + +R +S RR +PS+ R
Sbjct: 217 KEIEEAMKRVREA--QSLISAAIEPDK------KEEKRRHSRSRSRSRRRR---TPSSSR 265
Query: 491 KHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQ 550
H R R + + K + R S R R R RS+ ++ ++ +K+
Sbjct: 266 -HRRSRSRSR--RRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKR 322
Query: 551 EKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEM 610
KTP K Y + + RE+ RS S + SP P S + K S+ K +
Sbjct: 323 SKTPP--KSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKK 380
Query: 611 KEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKS 670
+ + R R T + + + + + + + + T +E+ +D E K
Sbjct: 381 DKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKE 440
Query: 671 KK 672
+K
Sbjct: 441 EK 442
Score = 51.2 bits (121), Expect = 3e-06
Identities = 51/231 (22%), Positives = 88/231 (38%), Gaps = 24/231 (10%)
Query: 517 SADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHS 576
SA + D ++ S+ R S+ R S SR + + + S + +
Sbjct: 234 SAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRR 293
Query: 577 RSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRAR 636
RS S S S+ + ++ KKE +E+ ++ K YS +R + R R R R+R
Sbjct: 294 RSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYS----TARRSRSASRERRRRRSR 349
Query: 637 GVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTF 696
S T K+P+ + +P +++ +D + + R
Sbjct: 350 ------------SGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKD--------KDKERSRD 389
Query: 697 QRGRGRFNFKKSGSSPKWTHDKYQGDGIVEDEEETMENNEEKKDRRKEEKE 747
+R R KKS K K + D V+ + E+ D KE+KE
Sbjct: 390 ERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKE 440
Score = 42.4 bits (98), Expect = 0.002
Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 11/161 (6%)
Query: 449 KSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQK 508
KS + R S ++ + +SP+ R S RK +R R KE+ +
Sbjct: 328 KSYSTARRSRSASRERRRRRSRSGTRSPKKPR------SPKRKLSRSPSPRRHKKEKKKD 381
Query: 509 GDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSK 568
DK+ D + ++ K++ K+R R+S + ++ +DY E + D K
Sbjct: 382 KDKERSRDERERSTSKKKKSKDKEKDR-----ERKSESDKDVKQVTRDYDEEEQGYDSEK 436
Query: 569 HKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHE 609
K+E+ + S + + +S +E + HHE
Sbjct: 437 EKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHE 477
Score = 35.0 bits (79), Expect = 0.25
Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 13/165 (7%)
Query: 442 HVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERV 501
H +E+ +S + + K + T KS RR + R+ +G
Sbjct: 296 HSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSP 355
Query: 502 FKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYK 561
K + K +KL + RH ++ K++ K++ S+ RE S S+K K+ K
Sbjct: 356 KKPRSPK--RKLSRSPSPRRH---KKEKKKDKDKERSRDERERSTSKK--------KKSK 402
Query: 562 SYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKT 606
+ D + K E D + + ++ KKE ++ +T
Sbjct: 403 DKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKEEKKPIET 447
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 80.5 bits (197), Expect = 5e-15
Identities = 153/655 (23%), Positives = 242/655 (36%), Gaps = 118/655 (18%)
Query: 23 SRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPYGYRGRGRGYYQ 82
S+ K R SRSRS++ SR+RSR ++R RR +R R R Y
Sbjct: 265 SKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRR-------------HRSRSRSY-- 309
Query: 83 GGGGRYHRGGYRPVWNRRHSRSPRRGRS-RSRSPKRR---SVSSQRSRSRSRRSYRSSRS 138
+ R SPRR S R R+P RR +RSRS RR RSS S
Sbjct: 310 ---------------SPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSAS 354
Query: 139 PRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDT----FEHD 194
SSS SSS S+SP K +K SP + + + P T H
Sbjct: 355 LSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHS 414
Query: 195 PSESIDEFNKSSATSGDIWPGLSA----YDNSPRSPHSPSPIATPPSQSSSCSDAPMLST 250
P+ + N++ + + PG ++ SPSP P S S+
Sbjct: 415 PTP--QQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGK 472
Query: 251 VHSAKNTPSQHSHSIQHSPERSGSGS-------------VGNGS----SRYSPSQN-SPI 292
+ +A + + + Q+ S SGS V NG R+SPS++ SP
Sbjct: 473 MAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPS 532
Query: 293 --------------HHIPS------RRSPAKTIAP--QNAPRDESRGRSSFYPDGGDQET 330
PS RRSP+ P + P R R+ P +
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS 592
Query: 331 AKTGKFLKSPPLHKNLDAREKSTFREES-PLRIKMIASDSHRPEVKLKMAPVPLDDSNRP 389
+ SPP+ + R S P K AS S P+ ++ +P P R
Sbjct: 593 PRR----YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPP---KQRS 645
Query: 390 ASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFK 449
+ +TK R + + H K RS + + PQ +K S S +
Sbjct: 646 SPVTKRRSPSLSSKHR-KGSSPSRSTRE-ARSPQPNKRHSPSPRPRAPQT--SSSPPPVR 701
Query: 450 SAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKG 509
A + +R S +T ++PE ++I + S + R R +
Sbjct: 702 RGASSSPQRRQSPSPSTRPIRRVSRTPE-PKKIKKAASPSPQSVRRVSSSRSVSGSPEPA 760
Query: 510 DKKLRCDSADLRHD-----------IDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYK 558
KK + ++ + + + +E G +K++K K +K
Sbjct: 761 AKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHK 820
Query: 559 EYKSYKDDSKHKREQDHSRSSSSSASPSSPS------SREE----KESKKEREEE 603
+ K +K KHK+E+ + +++++ +P++ + ++EE E KKE E E
Sbjct: 821 KDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVAAPEPKKETESE 875
Score = 74.3 bits (181), Expect = 4e-13
Identities = 149/649 (22%), Positives = 235/649 (36%), Gaps = 105/649 (16%)
Query: 27 SHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPYGYRGRGRGYYQGGGG 86
S K++ +R RSR+ S+SRSR R S + R R +R R Y R R
Sbjct: 265 SKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRP--------- 315
Query: 87 RYHRGGYRPVWNRRHSRSPRRGRS-RSRSPKRRSVSS---QRSRSRSRRSYRSSRSPRSS 142
SPRR S R R+P RR +RSRS RR RSS S S
Sbjct: 316 -----------------SPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGS 358
Query: 143 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDT----FEHDPSES 198
SS SSS S+SP K +K SP + + + P T H P+
Sbjct: 359 SSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQ 418
Query: 199 IDEFNKSSATSGDIWPGLSA----YDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSA 254
+ N++ + + PG ++ SPSP P S S+ + +A
Sbjct: 419 --QSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAA 476
Query: 255 KNTPSQHSHSIQHSPERSGSGS-------------VGNGS----SRYSPSQN-SPI---- 292
+ + + Q+ S SGS V NG R+SPS++ SP
Sbjct: 477 DSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKR 536
Query: 293 ----------HHIPS------RRSPAKTIAPQN--APRDESRGRSSFYPDGGDQETAKTG 334
PS RRSP+ P+ P R R+ P + +
Sbjct: 537 QKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRR- 595
Query: 335 KFLKSPPLHKNLDAREKSTFREESPLRI-KMIASDSHRPEVKLKMAPVPLDDSNRPASLT 393
SPP+ + R SP K AS S P+ ++ +P P R + +T
Sbjct: 596 ---YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPP---KQRSSPVT 649
Query: 394 KDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAM 453
K R + + H K RS + + PQ +K S S + A
Sbjct: 650 KRRSPSLSSKHR-KGSSPSRSTRE-ARSPQPNKRHSPSPRPRAPQTSSSPPP--VRRGAS 705
Query: 454 TLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKL 513
+ +R S +T ++PE ++I + S + R R + KK
Sbjct: 706 SSPQRRQSPSPSTRPIRRVSRTPE-PKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 764
Query: 514 RCDSADLRHDID----------RRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSY 563
+ ++ ++ K + + S + G +K++K K K++K
Sbjct: 765 PAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKK--KKDKKHKKD 822
Query: 564 KDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKE 612
K KHK+ + ++++A+ +P++ + +EE KE
Sbjct: 823 KKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVAAPEPKKE 871
Score = 67.0 bits (162), Expect = 6e-11
Identities = 108/433 (24%), Positives = 160/433 (36%), Gaps = 81/433 (18%)
Query: 99 RRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPR-SSSSRSSSP----YSKS 153
R SRSPRR +SRS SP+RRS +R R RS SRSPR + SRS SP K+
Sbjct: 166 RERSRSPRRRKSRSPSPRRRSSPVRRERKRSH-----SRSPRHRTKSRSPSPAPEKKEKT 220
Query: 154 P------VSKRRGSQEKQTKKAE----------GEPQEESPLKSKSQEEPKDTFEHDPSE 197
P V + S ++ T ++ EP+E SP K+ +E+ K E
Sbjct: 221 PELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEK--------E 272
Query: 198 SIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNT 257
++S + S S PR H + P + S P +
Sbjct: 273 KTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRM 332
Query: 258 PSQHSHSIQHSP----ERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS--PAKT--IAPQ- 308
P H SP RS + G+ SS S SP P R S P KT ++P
Sbjct: 333 PPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSA 392
Query: 309 NAPRDESR--------GRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPL 360
+ PR R ++ P + + SP + K T + ESP
Sbjct: 393 SPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESP- 451
Query: 361 RIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIK 420
S + +P K++++ D + A+ SV++ +++R
Sbjct: 452 ------SPAPKPR-KVELSESEEDKGGKMAA-----------ADSVQQRRQYRRQNQQSS 493
Query: 421 LPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQK--SPEI 478
S S+SE K + K+ + R + + A+ RQK SP
Sbjct: 494 SDSGSSSSSED---------ERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRG 544
Query: 479 HRRIDISPSTLRK 491
RR SP R+
Sbjct: 545 RRRRSPSPPPTRR 557
Score = 58.9 bits (141), Expect = 2e-08
Identities = 107/495 (21%), Positives = 172/495 (34%), Gaps = 88/495 (17%)
Query: 110 SRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSK-SPVSKRRGSQEKQTKK 168
S + + + + + SR SRSPR SRS SP + SPV + R ++ +
Sbjct: 143 SMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPR 202
Query: 169 AEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHS 228
+ + SP K ++ P+ +PS + E + ATS + + P P
Sbjct: 203 HRTKSRSPSPAPEKKEKTPE---LPEPSVKVKEPSVQEATSTSDILKVPKPEPIP-EPKE 258
Query: 229 PSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHS-PERSGSGSVGNGSSRYSPS 287
PSP + P + +K+ S S H+ P R + S R PS
Sbjct: 259 PSPEKNSKKEKEKEKTRPRSRS--RSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPS 316
Query: 288 ---QNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHK 344
+ SP P RR P ++ R RSS G ++ + +SPP
Sbjct: 317 PRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRS--RSPP--- 371
Query: 345 NLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVH 404
+K R SP R S S P + + P P P T+
Sbjct: 372 -----KKPPKRTSSPPRKTRRLSPSASPP-RRRHRPSP---PATPPPKTR---------- 412
Query: 405 SVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQK 464
H PQ S T +S + S + + K
Sbjct: 413 -------------HSPTPQQSNRTRKSRV----------------SVSPGRTSGKVTKHK 443
Query: 465 ATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAG-----EERVFKEENQKGDKKLRCDSAD 519
TE+ + +P+ R++++S S K ++A + R ++ +NQ+ DS
Sbjct: 444 GTEKRESPSPAPK-PRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSS----DSGS 498
Query: 520 LRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSS 579
D R K + G+ R S SR +P+ KR+++ S
Sbjct: 499 SSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPR--------------KRQKETSPRG 544
Query: 580 SSSASPSSPSSREEK 594
SPS P +R +
Sbjct: 545 RRRRSPSPPPTRRRR 559
Score = 53.1 bits (126), Expect = 9e-07
Identities = 82/284 (28%), Positives = 112/284 (39%), Gaps = 42/284 (14%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRS-----RDRMYSRDY 57
RS S S R K S R RS S +R S S + R R+ R R S
Sbjct: 527 RSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPP 586
Query: 58 RRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSP--RRGRSRSRSP 115
RR + R P R Y + P RR S SP +R S S P
Sbjct: 587 RRRSPSPRRYSPPIQRR-----YSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPP 641
Query: 116 KRRS--VSSQRSRSRSR---------RSYRSSRSPRSSSSRSSSPY------SKSPVSKR 158
K+RS V+ +RS S S RS R +RSP+ + S SP S SP R
Sbjct: 642 KQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVR 701
Query: 159 RGSQEKQTKKAEGEPQEESPLK--SKSQEEPKDTFEHDPS-ESIDEFNKSSATSGDIWPG 215
RG+ ++ P P++ S++ E K PS +S+ + S + SG P
Sbjct: 702 RGASSSPQRRQSPSPSTR-PIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPA 760
Query: 216 LSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPS 259
+ + P PSP+ SQS S + +P + + TPS
Sbjct: 761 ------AKKPPAPPSPV---QSQSPSTNWSPAVPVKKAKSPTPS 795
Score = 49.3 bits (116), Expect = 1e-05
Identities = 83/379 (21%), Positives = 136/379 (35%), Gaps = 43/379 (11%)
Query: 3 RSNSRSHSSRSK-SRSQSSSRSRSRSHSRKKRYSS--RSRSRTYSRS---RSRDRMYSRD 56
R SSR K RS+S R +SRS S ++R S R R R++SRS R++ R S
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPA 213
Query: 57 YRRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPK 116
+ + + P+ + + + K
Sbjct: 214 PEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEK 273
Query: 117 RRSVSSQRSRSRSRRSYRS-----SRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 171
R S RS+SRSR RS R S SRS SP + P +RR S ++T
Sbjct: 274 TRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSP-RRRPSPRRRPSPRRRTPPRRM 332
Query: 172 EP-----QEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSP 226
P + SP++ + + S S+ + SS++S P P+ P
Sbjct: 333 PPPPRHRRSRSPVRRRRRS----------SASLSGSSSSSSSSRSRSP--------PKKP 374
Query: 227 HSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSP 286
P ++PP ++ S + + P+ +HSP S SP
Sbjct: 375 --PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSP 432
Query: 287 SQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQ----ETAKTGKFLKSPPL 342
+ S + + K +P AP+ S D G + ++ + + +
Sbjct: 433 GRTS--GKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQ 490
Query: 343 HKNLDAREKSTFREESPLR 361
+ D+ S+ +E P R
Sbjct: 491 QSSSDSGSSSSSEDERPKR 509
Score = 37.4 bits (85), Expect = 0.051
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 11/121 (9%)
Query: 483 DISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLR------HDIDRRRKERSKERG 536
++ P L +AG F E ++ K+ + + L D D+R KE KE
Sbjct: 104 ELWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEE-KESS 162
Query: 537 DSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKES 596
K R S R++ ++P + + +R++ HSRS SPS EK+
Sbjct: 163 REKRERSRSPRRRKSRSPSPRRR----SSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKE 218
Query: 597 K 597
K
Sbjct: 219 K 219
Score = 36.2 bits (82), Expect = 0.11
Identities = 56/238 (23%), Positives = 86/238 (36%), Gaps = 28/238 (11%)
Query: 428 TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPS 487
+++ I I S +K++ K + E+ S +K E+ R K + S
Sbjct: 111 SAQENIAGIPSAFLELKKEEIKQRQIE-QEKLASMKKQDEDKDKRDKEEK--------ES 161
Query: 488 TLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGD---SKGSRES 544
+ K R R +K R S R RR ++RS R +K S
Sbjct: 162 SREKRERSRSPRR----------RKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPS 211
Query: 545 SGSRKQEKTPKDYKEYKSYKDDSKHK--REQDHSRSSSSSASPSSPSSREEKESKKEREE 602
K+EKTP+ + K+ S + D + P EK SKKE+E+
Sbjct: 212 PAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEK 271
Query: 603 EFKTHHEMKEYSGFAGVSR---PRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRP 657
E KT + S +R P T R R R R+R P + ++ P
Sbjct: 272 E-KTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTP 328
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 79.7 bits (195), Expect = 9e-15
Identities = 69/203 (33%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 3 RSNSRSHSSRSKSRSQSS------SRSRSRSHSRKKRYSSRSRS-----RTYSRSRSRDR 51
+S R+ SRS++R +SS S++RSRS SR++R SSRSRS R+ S+ + +
Sbjct: 1835 KSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRS 1894
Query: 52 MYSRDYRRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSR 111
R R+ + R R R R R H RR SRS R RS
Sbjct: 1895 PKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPS-----RRRRSRSVGRRRSF 1949
Query: 112 SRSPKRRS-VSSQRSRSRSRRSYRSSRSPRSSSSRSSSP--YSKSPVSKRRGSQEKQTKK 168
S SP RRS S+RSR+ SRRS SR R+ S RS +P S++P +RR + +
Sbjct: 1950 SISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRS 2009
Query: 169 AEGEP----QEESPLKSKSQEEP 187
P + +PL+ + P
Sbjct: 2010 FSISPVRLRRSRTPLRRRFSRSP 2032
Score = 79.0 bits (193), Expect = 2e-14
Identities = 79/227 (34%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 3 RSNSRSHSSRSKS-RSQSSSRSRSRSHSRKKRYSSRSRSRTY-----------SRSRSRD 50
RS +R SS+SKS RSQ+ SRSRSR R R S+SR R RS+SR+
Sbjct: 1844 RSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRE 1903
Query: 51 RMYSRDYRRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWN---RRHSRSP-R 106
R R RD R R R R R + R G R ++ R SR+P R
Sbjct: 1904 RKRKRSSSRDNRKTVRARSRTPSR-RSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR 1962
Query: 107 RGRS---RSRSPKRRS-VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQ 162
R R+ RSR+P RRS S+RSR+ SRRS SR RS S +S SPV RR
Sbjct: 1963 RSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRT 2022
Query: 163 EKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATS 209
+ + + + + S+ PK + D ++ + E K++A +
Sbjct: 2023 PLRRRFSRSPIRRKRSRSSERGRSPKRLTDLDKAQLL-EIAKANAAA 2068
Score = 68.2 bits (165), Expect = 3e-11
Identities = 65/199 (32%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSR-----SHSRKKRYSSRS---RSRTYSRSRSRDRMYS 54
+ R S RS+S+ SS +SR S SR ++ SS+S RS+T SRSRSR R S
Sbjct: 1814 KEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRS 1873
Query: 55 RDYRRDYRNNRGM---RRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSR 111
R R R + +R + R + + R + V R SR+P R RSR
Sbjct: 1874 SRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSR-RSR 1930
Query: 112 SRSPKRRSVS-------------SQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKR 158
S +P RR S S+RSR+ SRRS SR R+ S RS +P +S R
Sbjct: 1931 SHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1990
Query: 159 RGSQEKQTKKAEGEPQEES 177
R + +++ + S
Sbjct: 1991 RSRTPSRRRRSRSVVRRRS 2009
Score = 63.2 bits (152), Expect = 9e-10
Identities = 75/256 (29%), Positives = 102/256 (39%), Gaps = 41/256 (16%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRN 63
S+ RS S RSKS S + S S SR ++ SS+S+S RS++R R SR RR R+
Sbjct: 1820 SSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSH---RSQTRSRSRSRRRRRSSRS 1876
Query: 64 NRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQ 123
+ RGR R V + RSP+ RS+SR KR+ SS+
Sbjct: 1877 RS--------KSRGR---------------RSVSKEKRKRSPKH-RSKSRERKRKRSSSR 1912
Query: 124 ----------RSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRR--GSQEKQTKKAEG 171
R+ SR RS+ SR RS S +S SP + R + + +
Sbjct: 1913 DNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSR 1972
Query: 172 EPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSP-RSPHSPS 230
P S S+ P PS + S I P +P R S S
Sbjct: 1973 TPSRRSRTPSRRSRTPSRR-SRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRS 2031
Query: 231 PIATPPSQSSSCSDAP 246
PI S+SS +P
Sbjct: 2032 PIRRKRSRSSERGRSP 2047
Score = 50.1 bits (118), Expect = 8e-06
Identities = 64/235 (27%), Positives = 89/235 (37%), Gaps = 29/235 (12%)
Query: 102 SRSPRRGRSRSRSPKRRSVS----------------SQRSRSRSRRSYRSSRS-PRSSSS 144
SRS R S +S KR S S RSRSRSRR RSSRS +S
Sbjct: 1824 SRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGR 1883
Query: 145 RSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNK 204
RS S + K R ++ +K ++++S+ + + H PS +
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSV 1943
Query: 205 SSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHS 264
S I P + S RS +PS + PS+ S T TPS+ S +
Sbjct: 1944 GRRRSFSISPSRRSRTPSRRS-RTPSRRSRTPSRRS--------RTPSRRSRTPSRRSRT 1994
Query: 265 IQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRS 319
S R V S SP + P RR +++ + R RGRS
Sbjct: 1995 --PSRRRRSRSVVRRRSFSISPVRLRR-SRTPLRRRFSRSPIRRKRSRSSERGRS 2046
Score = 46.2 bits (108), Expect = 1e-04
Identities = 89/423 (21%), Positives = 150/423 (35%), Gaps = 48/423 (11%)
Query: 211 DIWPGLSAYDN----SPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQ 266
D +PG+S D S P + P AT S+ + A LS V+ S + +
Sbjct: 1579 DTYPGVSEADAGETLSSTGPFALEPDATGTSKGIEFTTASTLSLVNKYDVDLSLTTQDTE 1638
Query: 267 HSPERSGSGSVGNGSSRYSPSQNSPIH-HIPSRRS----------PAK----TIAPQNAP 311
H S S S G+ + P IH +PS + P K T+A +P
Sbjct: 1639 HDMVISTSPSGGSEADIEGPLPAKDIHLDLPSNNNLVSKDTEEPLPVKESDQTLAALLSP 1698
Query: 312 RDESRGRSSFYPDGGDQETAKTGKF-----------LKSPPLHKNLDAREKSTFREESPL 360
++ S G P +ET F L P L K+++ E PL
Sbjct: 1699 KESSGGEKEVPPP--PKETLPDSGFSANIEDINEADLVRPLLPKDMERLTSLRAGIEGPL 1756
Query: 361 RIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIK 420
+ D + P +S+ + + H K+ + R D +
Sbjct: 1757 LASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNR---DKGE 1813
Query: 421 LPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHR 480
+ S+ S + S H +++ +S + R S + + TR +S R
Sbjct: 1814 KEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRA---RKRSSKSKSHRSQTRSRSRSRRR 1870
Query: 481 RIDISPSTLRKHTRLAGEERVFKEENQKGDK---KLRCDSADLRHDIDRRRKERSKERGD 537
R + R ++ G V KE+ ++ K K R D R+ R++ R
Sbjct: 1871 R-----RSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTP 1925
Query: 538 SKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESK 597
S+ SR + SR++ + +S+ + RS + S +PS R S+
Sbjct: 1926 SRRSRSHTPSRRRRS--RSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1983
Query: 598 KER 600
+ R
Sbjct: 1984 RSR 1986
Score = 42.7 bits (99), Expect = 0.001
Identities = 91/331 (27%), Positives = 130/331 (39%), Gaps = 53/331 (16%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYS-RSRSRDRMYSRDYRR 59
+GR S S S +SR+ S RSR+ SR+ R SR RSRT S RSR+ R RR
Sbjct: 1943 VGRRRSFSISPSRRSRTPS---RRSRTPSRRSRTPSR-RSRTPSRRSRTPSRRSRTPSRR 1998
Query: 60 DYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSP-RRGRSRS----RS 114
R +R + R R + R R R RR SRSP RR RSRS RS
Sbjct: 1999 --RRSRSVVR--------RRSFSISPVRLRRS--RTPLRRRFSRSPIRRKRSRSSERGRS 2046
Query: 115 PKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQ 174
PKR + +++ +++ + + + P + P +EK KK+ G
Sbjct: 2047 PKR---LTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPT-IEEKVAKKSGGATI 2102
Query: 175 EESPLKSK---SQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSP 231
EE K K +E D + P S +E + + + P P P
Sbjct: 2103 EELTEKCKQIAQSKEDDDVIVNKPHVSDEEEEE------------PPFYHHPFKLSEPKP 2150
Query: 232 I----------ATPP-SQSSSCSDAPMLS-TVHSAKNTPSQHSHSIQHSPERSGSGSVGN 279
I TPP SQ + + P+ S + H K S + + + N
Sbjct: 2151 IFFNLNIAAAKPTPPKSQVTLTKEFPVSSGSQHRKKEADSVYGEWVPVEKNGEENKDDDN 2210
Query: 280 GSSRYSPSQNSPIHHIPSRRSPAKTIAPQNA 310
S PS+ I S R+ A+ +NA
Sbjct: 2211 VFSSNLPSEPVDISTAMSERALAQKRLSENA 2241
Score = 40.8 bits (94), Expect = 0.005
Identities = 72/289 (24%), Positives = 110/289 (38%), Gaps = 36/289 (12%)
Query: 111 RSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKS-PVSKRRGSQEKQTKKA 169
RSRS KR S +SR R+ S RS RSS S+S ++S S+RR + K+
Sbjct: 1823 RSRS-KRSKSSEHKSRKRTSES-RSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKS 1880
Query: 170 EGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSP 229
G + +S + + E S N+ + + P + ++P
Sbjct: 1881 RGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRS 1940
Query: 230 SPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQN 289
+ +S S S + T TPS+ S +P R +PS+
Sbjct: 1941 RSVGR--RRSFSISPSRRSRTPSRRSRTPSRRS----RTPSRRSR----------TPSRR 1984
Query: 290 SPIHHIPSRRSPAKTIAPQNAPRDESRGRS-SFYPDG-GDQETAKTGKFLKSPPLHKNLD 347
S PSRRS +T + + R R RS S P T +F +SP K
Sbjct: 1985 S---RTPSRRS--RTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRK--- 2036
Query: 348 AREKSTFREESPLRI------KMIASDSHRPEVKLKMAPVPLDDSNRPA 390
R +S+ R SP R+ +++ A VPL + +PA
Sbjct: 2037 -RSRSSERGRSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPA 2084
Score = 35.4 bits (80), Expect = 0.19
Identities = 68/316 (21%), Positives = 122/316 (38%), Gaps = 38/316 (12%)
Query: 127 SRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 186
SR R P S K +K++ ++++ KK + +P EES K+KS ++
Sbjct: 87 SRKSRCVSVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQP-EESESKTKSHDD 145
Query: 187 PKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAP 246
E D D ++ SA + ++ A+ S + SP+ + PP S S+
Sbjct: 146 GNIDLESDSFLKFD--SEPSAVALEL--PTRAFGPS-ETNESPAVVLEPPVVSMEVSEPH 200
Query: 247 MLSTVHSAKNT-----------PSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHI 295
+L T+ A T Q S+ PE S + + + ++ P+ +
Sbjct: 201 ILETLKPATKTAELSVVSTSVISEQSEQSVAVMPEPSMTKILDSFAAAPVPTTTL----V 256
Query: 296 PSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFR 355
P T++ + + + S P E +K L PP+ K L+ E
Sbjct: 257 LKSSEPVVTMSVEYQMKSVLKSVESTSP-----EPSKI--MLVEPPVAKVLEPSETLVVS 309
Query: 356 EESPLRIKMIASDSHR---PE------VKLKMAPVPLDDSNRPASLTKDRLLASTLVHSV 406
E+P + S S PE ++L PV + +S+T+ + L L +
Sbjct: 310 SETPTEVYPEPSTSTTMDFPESSAIEALRLPEQPVDVPSEIADSSMTRPQELPE-LPKTT 368
Query: 407 KKEQEFRSIFDHIKLP 422
E + S+ ++LP
Sbjct: 369 ALELQESSVASAMELP 384
Score = 35.4 bits (80), Expect = 0.19
Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 3/144 (2%)
Query: 463 QKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRH 522
++A+E S + EI ++ + +K+ E+ K ++ + R S++ +
Sbjct: 1777 ERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHK- 1835
Query: 523 DIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSS 582
R+R S+ R + S+ S + + + +S + SK + + S+
Sbjct: 1836 --SRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKR 1893
Query: 583 ASPSSPSSREEKESKKEREEEFKT 606
+ SRE K + + KT
Sbjct: 1894 SPKHRSKSRERKRKRSSSRDNRKT 1917
Score = 35.4 bits (80), Expect = 0.19
Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 3/154 (1%)
Query: 503 KEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKS 562
K+ ++K K D + D + RSK S+ S + + K + KS
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856
Query: 563 YKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVSRP 622
++ ++ + R SS S S S SK++R+ K + +E SR
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRS---RSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRD 1913
Query: 623 RGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKR 656
R R R +R + T + S + ++R
Sbjct: 1914 NRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRR 1947
Score = 31.2 bits (69), Expect = 3.7
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 502 FKEENQKGDKKLRCDSA--DLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKE 559
+K + ++G +K RC S D +I ++ ++ K+ + K ++ +K ++ P++ +
Sbjct: 79 YKPDLKEGSRKSRCVSVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESES 138
Query: 560 YKSYKDDSKHKREQD 574
DD E D
Sbjct: 139 KTKSHDDGNIDLESD 153
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 79.7 bits (195), Expect = 9e-15
Identities = 69/203 (33%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 3 RSNSRSHSSRSKSRSQSS------SRSRSRSHSRKKRYSSRSRS-----RTYSRSRSRDR 51
+S R+ SRS++R +SS S++RSRS SR++R SSRSRS R+ S+ + +
Sbjct: 1835 KSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRS 1894
Query: 52 MYSRDYRRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSR 111
R R+ + R R R R R H RR SRS R RS
Sbjct: 1895 PKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPS-----RRRRSRSVGRRRSF 1949
Query: 112 SRSPKRRS-VSSQRSRSRSRRSYRSSRSPRSSSSRSSSP--YSKSPVSKRRGSQEKQTKK 168
S SP RRS S+RSR+ SRRS SR R+ S RS +P S++P +RR + +
Sbjct: 1950 SISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRS 2009
Query: 169 AEGEP----QEESPLKSKSQEEP 187
P + +PL+ + P
Sbjct: 2010 FSISPVRLRRSRTPLRRRFSRSP 2032
Score = 79.0 bits (193), Expect = 2e-14
Identities = 79/227 (34%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 3 RSNSRSHSSRSKS-RSQSSSRSRSRSHSRKKRYSSRSRSRTY-----------SRSRSRD 50
RS +R SS+SKS RSQ+ SRSRSR R R S+SR R RS+SR+
Sbjct: 1844 RSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRE 1903
Query: 51 RMYSRDYRRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWN---RRHSRSP-R 106
R R RD R R R R R + R G R ++ R SR+P R
Sbjct: 1904 RKRKRSSSRDNRKTVRARSRTPSR-RSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR 1962
Query: 107 RGRS---RSRSPKRRS-VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQ 162
R R+ RSR+P RRS S+RSR+ SRRS SR RS S +S SPV RR
Sbjct: 1963 RSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRT 2022
Query: 163 EKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATS 209
+ + + + + S+ PK + D ++ + E K++A +
Sbjct: 2023 PLRRRFSRSPIRRKRSRSSERGRSPKRLTDLDKAQLL-EIAKANAAA 2068
Score = 68.2 bits (165), Expect = 3e-11
Identities = 65/199 (32%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSR-----SHSRKKRYSSRS---RSRTYSRSRSRDRMYS 54
+ R S RS+S+ SS +SR S SR ++ SS+S RS+T SRSRSR R S
Sbjct: 1814 KEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRS 1873
Query: 55 RDYRRDYRNNRGM---RRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSR 111
R R R + +R + R + + R + V R SR+P R RSR
Sbjct: 1874 SRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSR-RSR 1930
Query: 112 SRSPKRRSVS-------------SQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKR 158
S +P RR S S+RSR+ SRRS SR R+ S RS +P +S R
Sbjct: 1931 SHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1990
Query: 159 RGSQEKQTKKAEGEPQEES 177
R + +++ + S
Sbjct: 1991 RSRTPSRRRRSRSVVRRRS 2009
Score = 63.2 bits (152), Expect = 9e-10
Identities = 75/256 (29%), Positives = 102/256 (39%), Gaps = 41/256 (16%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRN 63
S+ RS S RSKS S + S S SR ++ SS+S+S RS++R R SR RR R+
Sbjct: 1820 SSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSH---RSQTRSRSRSRRRRRSSRS 1876
Query: 64 NRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQ 123
+ RGR R V + RSP+ RS+SR KR+ SS+
Sbjct: 1877 RS--------KSRGR---------------RSVSKEKRKRSPKH-RSKSRERKRKRSSSR 1912
Query: 124 ----------RSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRR--GSQEKQTKKAEG 171
R+ SR RS+ SR RS S +S SP + R + + +
Sbjct: 1913 DNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSR 1972
Query: 172 EPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSP-RSPHSPS 230
P S S+ P PS + S I P +P R S S
Sbjct: 1973 TPSRRSRTPSRRSRTPSRR-SRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRS 2031
Query: 231 PIATPPSQSSSCSDAP 246
PI S+SS +P
Sbjct: 2032 PIRRKRSRSSERGRSP 2047
Score = 50.1 bits (118), Expect = 8e-06
Identities = 64/235 (27%), Positives = 89/235 (37%), Gaps = 29/235 (12%)
Query: 102 SRSPRRGRSRSRSPKRRSVS----------------SQRSRSRSRRSYRSSRS-PRSSSS 144
SRS R S +S KR S S RSRSRSRR RSSRS +S
Sbjct: 1824 SRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGR 1883
Query: 145 RSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNK 204
RS S + K R ++ +K ++++S+ + + H PS +
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSV 1943
Query: 205 SSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHS 264
S I P + S RS +PS + PS+ S T TPS+ S +
Sbjct: 1944 GRRRSFSISPSRRSRTPSRRS-RTPSRRSRTPSRRS--------RTPSRRSRTPSRRSRT 1994
Query: 265 IQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRS 319
S R V S SP + P RR +++ + R RGRS
Sbjct: 1995 --PSRRRRSRSVVRRRSFSISPVRLRR-SRTPLRRRFSRSPIRRKRSRSSERGRS 2046
Score = 46.2 bits (108), Expect = 1e-04
Identities = 89/423 (21%), Positives = 150/423 (35%), Gaps = 48/423 (11%)
Query: 211 DIWPGLSAYDN----SPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQ 266
D +PG+S D S P + P AT S+ + A LS V+ S + +
Sbjct: 1579 DTYPGVSEADAGETLSSTGPFALEPDATGTSKGIEFTTASTLSLVNKYDVDLSLTTQDTE 1638
Query: 267 HSPERSGSGSVGNGSSRYSPSQNSPIH-HIPSRRS----------PAK----TIAPQNAP 311
H S S S G+ + P IH +PS + P K T+A +P
Sbjct: 1639 HDMVISTSPSGGSEADIEGPLPAKDIHLDLPSNNNLVSKDTEEPLPVKESDQTLAALLSP 1698
Query: 312 RDESRGRSSFYPDGGDQETAKTGKF-----------LKSPPLHKNLDAREKSTFREESPL 360
++ S G P +ET F L P L K+++ E PL
Sbjct: 1699 KESSGGEKEVPPP--PKETLPDSGFSANIEDINEADLVRPLLPKDMERLTSLRAGIEGPL 1756
Query: 361 RIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIK 420
+ D + P +S+ + + H K+ + R D +
Sbjct: 1757 LASDVGRDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNR---DKGE 1813
Query: 421 LPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHR 480
+ S+ S + S H +++ +S + R S + + TR +S R
Sbjct: 1814 KEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRA---RKRSSKSKSHRSQTRSRSRSRRR 1870
Query: 481 RIDISPSTLRKHTRLAGEERVFKEENQKGDK---KLRCDSADLRHDIDRRRKERSKERGD 537
R + R ++ G V KE+ ++ K K R D R+ R++ R
Sbjct: 1871 R-----RSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTP 1925
Query: 538 SKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESK 597
S+ SR + SR++ + +S+ + RS + S +PS R S+
Sbjct: 1926 SRRSRSHTPSRRRRS--RSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1983
Query: 598 KER 600
+ R
Sbjct: 1984 RSR 1986
Score = 42.0 bits (97), Expect = 0.002
Identities = 67/210 (31%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYS-RSRSRDRMYSRDYRR 59
+GR S S S +SR+ S RSR+ SR+ R SR RSRT S RSR+ R RR
Sbjct: 1943 VGRRRSFSISPSRRSRTPS---RRSRTPSRRSRTPSR-RSRTPSRRSRTPSRRSRTPSRR 1998
Query: 60 DYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSP-RRGRSRS----RS 114
R +R + R R + R R R RR SRSP RR RSRS RS
Sbjct: 1999 --RRSRSVVR--------RRSFSISPVRLRRS--RTPLRRRFSRSPIRRKRSRSSERGRS 2046
Query: 115 PKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQ 174
PKR + +++ +++ + + + P + P +EK KK+ G
Sbjct: 2047 PKR---LTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPT-IEEKVAKKSGGATI 2102
Query: 175 EESPLKSK---SQEEPKDTFEHDPSESIDE 201
EE K K +E D + P S +E
Sbjct: 2103 EELTEKCKQIAQSKEDDDVIVNKPHVSDEE 2132
Score = 40.8 bits (94), Expect = 0.005
Identities = 72/289 (24%), Positives = 110/289 (38%), Gaps = 36/289 (12%)
Query: 111 RSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKS-PVSKRRGSQEKQTKKA 169
RSRS KR S +SR R+ S RS RSS S+S ++S S+RR + K+
Sbjct: 1823 RSRS-KRSKSSEHKSRKRTSES-RSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKS 1880
Query: 170 EGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSP 229
G + +S + + E S N+ + + P + ++P
Sbjct: 1881 RGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRS 1940
Query: 230 SPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQN 289
+ +S S S + T TPS+ S +P R +PS+
Sbjct: 1941 RSVGR--RRSFSISPSRRSRTPSRRSRTPSRRS----RTPSRRSR----------TPSRR 1984
Query: 290 SPIHHIPSRRSPAKTIAPQNAPRDESRGRS-SFYPDG-GDQETAKTGKFLKSPPLHKNLD 347
S PSRRS +T + + R R RS S P T +F +SP K
Sbjct: 1985 S---RTPSRRS--RTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRK--- 2036
Query: 348 AREKSTFREESPLRI------KMIASDSHRPEVKLKMAPVPLDDSNRPA 390
R +S+ R SP R+ +++ A VPL + +PA
Sbjct: 2037 -RSRSSERGRSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPA 2084
Score = 35.4 bits (80), Expect = 0.19
Identities = 68/316 (21%), Positives = 122/316 (38%), Gaps = 38/316 (12%)
Query: 127 SRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 186
SR R P S K +K++ ++++ KK + +P EES K+KS ++
Sbjct: 87 SRKSRCVSVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQP-EESESKTKSHDD 145
Query: 187 PKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAP 246
E D D ++ SA + ++ A+ S + SP+ + PP S S+
Sbjct: 146 GNIDLESDSFLKFD--SEPSAVALEL--PTRAFGPS-ETNESPAVVLEPPVVSMEVSEPH 200
Query: 247 MLSTVHSAKNT-----------PSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHI 295
+L T+ A T Q S+ PE S + + + ++ P+ +
Sbjct: 201 ILETLKPATKTAELSVVSTSVISEQSEQSVAVMPEPSMTKILDSFAAAPVPTTTL----V 256
Query: 296 PSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFR 355
P T++ + + + S P E +K L PP+ K L+ E
Sbjct: 257 LKSSEPVVTMSVEYQMKSVLKSVESTSP-----EPSKI--MLVEPPVAKVLEPSETLVVS 309
Query: 356 EESPLRIKMIASDSHR---PE------VKLKMAPVPLDDSNRPASLTKDRLLASTLVHSV 406
E+P + S S PE ++L PV + +S+T+ + L L +
Sbjct: 310 SETPTEVYPEPSTSTTMDFPESSAIEALRLPEQPVDVPSEIADSSMTRPQELPE-LPKTT 368
Query: 407 KKEQEFRSIFDHIKLP 422
E + S+ ++LP
Sbjct: 369 ALELQESSVASAMELP 384
Score = 35.4 bits (80), Expect = 0.19
Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 3/144 (2%)
Query: 463 QKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRH 522
++A+E S + EI ++ + +K+ E+ K ++ + R S++ +
Sbjct: 1777 ERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHK- 1835
Query: 523 DIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSS 582
R+R S+ R + S+ S + + + +S + SK + + S+
Sbjct: 1836 --SRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKR 1893
Query: 583 ASPSSPSSREEKESKKEREEEFKT 606
+ SRE K + + KT
Sbjct: 1894 SPKHRSKSRERKRKRSSSRDNRKT 1917
Score = 35.4 bits (80), Expect = 0.19
Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 3/154 (1%)
Query: 503 KEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKS 562
K+ ++K K D + D + RSK S+ S + + K + KS
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856
Query: 563 YKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVSRP 622
++ ++ + R SS S S S SK++R+ K + +E SR
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRS---RSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRD 1913
Query: 623 RGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKR 656
R R R +R + T + S + ++R
Sbjct: 1914 NRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRR 1947
Score = 31.2 bits (69), Expect = 3.7
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 502 FKEENQKGDKKLRCDSA--DLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKE 559
+K + ++G +K RC S D +I ++ ++ K+ + K ++ +K ++ P++ +
Sbjct: 79 YKPDLKEGSRKSRCVSVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESES 138
Query: 560 YKSYKDDSKHKREQD 574
DD E D
Sbjct: 139 KTKSHDDGNIDLESD 153
>gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]
Length = 282
Score = 79.3 bits (194), Expect = 1e-14
Identities = 70/183 (38%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRT-YSRSRSRDRMYSRDYRRDY 61
RS S RS+SR S SRSRSRS R RYS SR+ YSRSR YSR R+
Sbjct: 124 RSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYRES 183
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSR--SPRRGRSRSRSPKRRS 119
R GG Y GY N R+SR S R S RS
Sbjct: 184 RY--------------------GGSHYSSSGYS---NSRYSRYHSSRSHSKSGSSTSSRS 220
Query: 120 VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSP-VSKRRGSQEKQTKKAEGEPQEESP 178
S+ +S S +RRS SS S S SRSSS P VSKR+ ++K+ P+EE
Sbjct: 221 ASTSKS-SSARRSKSSSVSRSRSRSRSSSMTRSPPRVSKRKSKSRSRSKRPPKSPEEEGQ 279
Query: 179 LKS 181
+ S
Sbjct: 280 MSS 282
Score = 60.1 bits (144), Expect = 7e-09
Identities = 70/204 (34%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 74 RGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRG-RSRSRSPKRRSVSSQRSRSRSRRS 132
RGR RG GG GR R R SRSPRR RSRSR P S RSRSRSR
Sbjct: 106 RGRSRG---GGYGRRSRS------YGRRSRSPRRRHRSRSRGP-----SCSRSRSRSR-- 149
Query: 133 YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFE 192
YR SR RS SRS PYS+S S+ S+ + + G S S S+
Sbjct: 150 YRGSRYSRSPYSRS--PYSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNSR-------- 199
Query: 193 HDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVH 252
+ S +KS +++ S ++ RS S + S+SSS + +P V
Sbjct: 200 YSRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRSSSMTRSP--PRVS 257
Query: 253 SAKNTPSQHSHSIQHSPERSGSGS 276
K+ S SPE G S
Sbjct: 258 KRKSKSRSRSKRPPKSPEEEGQMS 281
Score = 40.0 bits (92), Expect = 0.008
Identities = 60/222 (27%), Positives = 83/222 (37%), Gaps = 57/222 (25%)
Query: 100 RHSRSPRRGRSRSRSPKRRSVS-SQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKR 158
R + RGRSR RRS S +RSRS RR SR P S SRS S Y
Sbjct: 99 RSRQGEPRGRSRGGGYGRRSRSYGRRSRSPRRRHRSRSRGPSCSRSRSRSRY-------- 150
Query: 159 RGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSA 218
RGS+ ++ P SP S
Sbjct: 151 RGSRYSRS------PYSRSPYSR-----------------------------------SR 169
Query: 219 YDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVG 278
Y RSP+S S S S + ++ +S ++ HS S + RS S S
Sbjct: 170 YS---RSPYSRSRYRESRYGGSHYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKS 226
Query: 279 NGSSRYSPSQNSPIHHIPSR-RSPAKTIAPQNAPRDESRGRS 319
+ + R S++S + SR RS + T +P + +S+ RS
Sbjct: 227 SSARR---SKSSSVSRSRSRSRSSSMTRSPPRVSKRKSKSRS 265
Score = 30.0 bits (66), Expect = 8.2
Identities = 37/142 (26%), Positives = 49/142 (34%), Gaps = 16/142 (11%)
Query: 462 YQKATEEHSTRQKSPEI-HRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADL 520
Y + + + R +SP HR PS R +R R + + S
Sbjct: 114 YGRRSRSYGRRSRSPRRRHRSRSRGPSCSRSRSR--SRYRGSRYSRSPYSRSPYSRSRYS 171
Query: 521 RHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKH-----KREQDH 575
R R R S+ G S S SR Y Y S + SK R
Sbjct: 172 RSPYSRSRYRESRYGGSHYSSSGYSNSR--------YSRYHSSRSHSKSGSSTSSRSAST 223
Query: 576 SRSSSSSASPSSPSSREEKESK 597
S+SSS+ S SS SR S+
Sbjct: 224 SKSSSARRSKSSSVSRSRSRSR 245
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 79.0 bits (193), Expect = 2e-14
Identities = 72/204 (35%), Positives = 89/204 (43%), Gaps = 42/204 (20%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
MGR SR + RS SR +S SRSRSRS S K+ S R R SRSR RDR R RD
Sbjct: 1 MGRE-SRHYRKRSASRGRSGSRSRSRSPSDKR--SKRGDDRR-SRSRDRDRRRERSRSRD 56
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
R +R R R R R R R R RSRS RR
Sbjct: 57 KRRSRSRDRKRLRRSRSR-----------------------ERDRSRERRRSRSRDRR-- 91
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
RSRSR RR SRSSSP +KS ++ R +++T E +++
Sbjct: 92 -RSRSRSRGRR------------SRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKD 138
Query: 181 SKSQEEPKDTFEHDPSESIDEFNK 204
K E+ KD D ++ +E K
Sbjct: 139 DKEDEKEKDAGNFDQNKLEEEMRK 162
Score = 61.2 bits (147), Expect = 3e-09
Identities = 58/205 (28%), Positives = 81/205 (39%), Gaps = 27/205 (13%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
RS SR R + R +S SR + RS SR ++ RSRSR RSR R R SRD RR
Sbjct: 39 RSRSRD---RDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRS 95
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSS 122
+RG R G + NR S+ G S+ K+
Sbjct: 96 RSRGRRSRSSSPGNKS---------------KKTENRSRSKEKTDGGESSKEKKKDKDDK 140
Query: 123 QRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQ---EESPL 179
+ + + ++ ++ R K V K R Q K+ + GE + EE
Sbjct: 141 EDEKEKDAGNFDQNKLEEEMRKR------KERVEKWREEQRKKAMENIGELKKEIEEMKQ 194
Query: 180 KSKSQEEPKDTFEHDPSESIDEFNK 204
K E D E DP+E+ E N+
Sbjct: 195 GKKWSLEDDDDDEDDPAEAEKEGNE 219
Score = 55.5 bits (132), Expect = 2e-07
Identities = 56/208 (26%), Positives = 85/208 (40%), Gaps = 28/208 (13%)
Query: 541 SRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKER 600
SR SGSR + ++P D K K D R++D R S S SR+ K ++ R
Sbjct: 14 SRGRSGSRSRSRSPSD-KRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSR 72
Query: 601 EEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEE 660
E E + SR R R R R R+RG + +++ N S T + +E
Sbjct: 73 SRERDRSRERRR-------SRSRD---RRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKE 122
Query: 661 EWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSS-PKWTHDKY 719
+ D + K KK D+DD D ++ + G F + + +K KW
Sbjct: 123 KTDGGESSKEKK----KDKDDKED---EKEKDAGNFDQNKLEEEMRKRKERVEKWRE--- 172
Query: 720 QGDGIVEDEEETMENNEEKKDRRKEEKE 747
E ++ MEN E K +E K+
Sbjct: 173 ------EQRKKAMENIGELKKEIEEMKQ 194
Score = 47.0 bits (110), Expect = 6e-05
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 458 RFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDK---KLR 514
R S +++ R +S + RR + S S ++ +R +R+ + +++ D+ + R
Sbjct: 25 RSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRR 84
Query: 515 CDSADLRHDIDRRRKERSKERGDSKGSRESSG-SRKQEKTP--KDYKEYKSYKDDSKHKR 571
S D R R R RS+ S+++ SR +EKT + KE K KDD + ++
Sbjct: 85 SRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEK 144
Query: 572 EQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMK 611
E+D + EE +KER E+++ K
Sbjct: 145 EKDAGNFDQNKL-------EEEMRKRKERVEKWREEQRKK 177
Score = 37.7 bits (86), Expect = 0.039
Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 490 RKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDR-RRKERSKERGDSKGSRESSGSR 548
RK + G DK+ + DR RR+ERS+ R D + SR R
Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSR-DKRRSRSRDRKR 67
Query: 549 KQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEE 603
+ ++ + + R + SRS + SSP ++ +K + R +E
Sbjct: 68 LRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKE 122
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 76.3 bits (186), Expect = 1e-13
Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 12 RSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPY 71
RS+SR + SRSRSR +R R R + R R RDR Y ++ + R R
Sbjct: 329 RSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRER 388
Query: 72 GYRGRGRG------YYQGGGGRYHRGGYRPVWN-RRHSRS-----PRRGRSRSRSPKRRS 119
R RG + + R HR R ++HSRS R RSRSR+ +RS
Sbjct: 389 SKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRS 448
Query: 120 VSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPL 179
RSRS+ + S + S S+ R S+S R S EK K+ +E+S
Sbjct: 449 ----RSRSKEKSSKHKNESKEKSNKR-----SRSGSQGRTDSVEKSKKREHSPSKEKSRK 499
Query: 180 KSKSQEEPKDTFEHDPSESIDEFNK 204
+S+S+E + + D S+S D+ +K
Sbjct: 500 RSRSKER---SHKRDHSDSKDQSDK 521
Score = 58.5 bits (140), Expect = 2e-08
Identities = 67/311 (21%), Positives = 131/311 (42%), Gaps = 27/311 (8%)
Query: 442 HVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERV 501
HV+ + +S +L+ R + + + H HR S S R+ R +R+
Sbjct: 254 HVERRRSRSPRRSLSPRRSPRRSRSRSH---------HREGHGSSSFDRELEREKERQRL 304
Query: 502 FKEENQKGDKKLRCDSADLRHDIDRRR-----KERSKERG-DSKGSRESSGSRKQEKTPK 555
+E ++ ++ R S D ++RRR + RS+ R D KG R ++++ +
Sbjct: 305 EREAKEREKERRRSRSID--RGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENER 362
Query: 556 DYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSG 615
+ + Y + ++RE++ RS S S EEK+ K+++++ + + ++
Sbjct: 363 GRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDR-RHRDDKRDSKK 421
Query: 616 FAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFL 675
SR R + R R R+R N G + + + +K K + E + K +
Sbjct: 422 EKKHSRSRSRERKHRSRSRSR------NAGKRSRSRSKEKSSKHKNESKEKSNKRSRSG- 474
Query: 676 HDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSSPKWTHDKYQGDGIVEDEEETME-N 734
R D V+ KR ++ R R K+ + K Q D +++E
Sbjct: 475 SQGRTDSVEKSKKREHSPSK-EKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQE 533
Query: 735 NEEKKDRRKEE 745
++EK+ + K+E
Sbjct: 534 SQEKQHKNKDE 544
Score = 58.5 bits (140), Expect = 2e-08
Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 14/182 (7%)
Query: 2 GRSNSRSHSS-RSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
GR R + R R + RSR RS ++ R + + R R RD +++
Sbjct: 363 GRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKE 422
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRY--------HRGGYRPVWNRRHSRSPRRGRSRS 112
+++R R +R R R G R H+ + N+R SRS +GR+ S
Sbjct: 423 KKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKR-SRSGSQGRTDS 481
Query: 113 --RSPKR-RSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYS-KSPVSKRRGSQEKQTKK 168
+S KR S S ++SR RSR RS + S S S + + S + SQEKQ K
Sbjct: 482 VEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKN 541
Query: 169 AE 170
+
Sbjct: 542 KD 543
Score = 45.8 bits (107), Expect = 1e-04
Identities = 70/290 (24%), Positives = 99/290 (34%), Gaps = 44/290 (15%)
Query: 99 RRHSRSPRRGRSRSRSPKR-RSVSSQR--------------------------SRSRSRR 131
RR SRSPRR S RSP+R RS S R R + RR
Sbjct: 257 RRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERR 316
Query: 132 SYRS---------SRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGE----PQEESP 178
RS SRS SRS S K R +EK+ ++ +E
Sbjct: 317 RSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGN 376
Query: 179 LKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQ 238
+ K +E ++ + S E K D D+ HS S +
Sbjct: 377 EREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHR 436
Query: 239 SSSCS-DAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPS 297
S S S +A S S + + + S + S +RS SGS G S ++ H PS
Sbjct: 437 SRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTD---SVEKSKKREHSPS 493
Query: 298 RRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLD 347
+ K + S D D+ +++ + HKN D
Sbjct: 494 KEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKNKD 543
Score = 43.1 bits (100), Expect = 0.001
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 6/146 (4%)
Query: 467 EEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGD----KKLRCDSADLRH 522
E+ K HR +KH+R ER + ++ + + R +H
Sbjct: 400 EKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKH 459
Query: 523 DIDRRRKERSKERGDSKGSRES-SGSRKQEKTPKDYKEYK-SYKDDSKHKREQDHSRSSS 580
+ + K + R S+G +S S+K+E +P K K S + HKR+ S+ S
Sbjct: 460 KNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQS 519
Query: 581 SSASPSSPSSREEKESKKEREEEFKT 606
S E++ +K+ + + +T
Sbjct: 520 DKHDRRRSQSIEQESQEKQHKNKDET 545
Score = 42.7 bits (99), Expect = 0.001
Identities = 46/229 (20%), Positives = 94/229 (41%), Gaps = 31/229 (13%)
Query: 520 LRHDIDRRRKERSKE-RGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRS 578
++ +ID++ K R ++ + D K E + + + + S + + R + H R
Sbjct: 225 VQKNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHRE 284
Query: 579 SSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRARGV 638
S+S RE++ + ERE + + + S G+ R R R R R R+R
Sbjct: 285 GHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRS---RSRERHRSRS- 340
Query: 639 FAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHD-DRDDGVDYWAKRGRGRGTFQ 697
+ + +R ++ E + E ++ +D +R + + +R R R Q
Sbjct: 341 --------RSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQ 392
Query: 698 RGRGRFNFKKSGSSPKWTHDKYQGDGIVEDEEETMENNEEKKDRRKEEK 746
R RG KK +++++ + ++K+D +KE+K
Sbjct: 393 RSRGEVEEKKH-----------------KEDKDDRRHRDDKRDSKKEKK 424
Score = 32.3 bits (72), Expect = 1.6
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 118 RSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVS-KRRGSQEKQTKKAEGEPQEE 176
R V +RSRS RRS RSPR S SRS S R +EK+ ++ E E +E
Sbjct: 253 RHVERRRSRS-PRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKER 311
Query: 177 SPLKSKSQ 184
+ +S+
Sbjct: 312 EKERRRSR 319
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 76.3 bits (186), Expect = 1e-13
Identities = 69/214 (32%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 3 RSNSRSHSSR-SKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
R+ SRS +K + +SR+R RS SR + S R RSRT+ R RSR + Y R ++Y
Sbjct: 541 RAQSRSRECDITKGKHSYNSRTRERSRSRDR--SRRVRSRTHDRDRSRSKEYHRYREQEY 598
Query: 62 RNNRGMRRPYGYR---GRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 118
R RG R R GR R + R R R R+ R S+S K
Sbjct: 599 R-RRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKEN 657
Query: 119 SVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGS------QEKQTKKAEGE 172
S S +R S+SR S+ S + R SP+SK S + + K+ +K
Sbjct: 658 SESEKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEKIRSS 717
Query: 173 PQEESPLKSKSQE-----EPKDTFEHDPSESIDE 201
++E+ KSK QE E F+H+ S DE
Sbjct: 718 VEKENQ-KSKGQENDHVHEKNKKFDHESSPGTDE 750
Score = 68.2 bits (165), Expect = 3e-11
Identities = 66/214 (30%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 3 RSNSRSHSSRSKSRSQSSSRS----RSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYR 58
RS R H + + QS S+ RSRS + K+ S+S +S+S+ +DR R
Sbjct: 488 RSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSR 547
Query: 59 -------------RDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSP 105
R +R R R R + YHR YR RR RS
Sbjct: 548 ECDITKGKHSYNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHR--YREQEYRRRGRSR 605
Query: 106 RR------GRSRSRSPKRR---SVSSQR--SRSRSRRSYRSSRSPRSSSSRSSSPYSKSP 154
R GRSRS+ +RR S SS+R S+SR++ YR+ S +SS + +S K
Sbjct: 606 SRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQES-KSSHRKENSESEKRM 664
Query: 155 VSKRR---GSQEKQTKKAEGEPQEESPLKSKSQE 185
SK R S + KKA+ + S +K SQ+
Sbjct: 665 YSKSRDHNSSNNSREKKADRDQSPFSKIKQSSQD 698
Score = 65.1 bits (157), Expect = 2e-10
Identities = 65/211 (30%), Positives = 90/211 (42%), Gaps = 40/211 (18%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKR-YSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
+SN HS + ++ SRSR ++ K Y+SR+R R+ SR RSR R+ SR + RD
Sbjct: 526 KSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRSR-RVRSRTHDRD- 583
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
R R + Y+ RY YR RRGRSRSR R
Sbjct: 584 ------------RSRSKEYH-----RYREQEYR-----------RRGRSRSRE---RRTP 612
Query: 122 SQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQT-KKAEGEPQEESPLK 180
RSRS+ RR R R RSS S +K K R + K + +K E ++ K
Sbjct: 613 PGRSRSKDRR--RRRRDSRSSEREESQSRNK---DKYRNQESKSSHRKENSESEKRMYSK 667
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGD 211
S+ ++ E F+K +S D
Sbjct: 668 SRDHNSSNNSREKKADRDQSPFSKIKQSSQD 698
Score = 63.9 bits (154), Expect = 5e-10
Identities = 107/510 (20%), Positives = 202/510 (39%), Gaps = 58/510 (11%)
Query: 115 PKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQ 174
PK + ++ R +S S SS S SSS S S S S + E+++KK + + +
Sbjct: 179 PKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQS---SSDSSDSESATEEKSKKRKKKHR 235
Query: 175 EESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIAT 234
+ S K +++ K + + SES E N + + P + P P + +
Sbjct: 236 KNSRKHKKEKKKRKKSKKSASSESEAE-NLEAQPQSTVRP-----EEIPPIPENRFLMRK 289
Query: 235 PPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHS--PERSGSGSVGNGSSRYSPSQNSPI 292
P ++ N P+ S Q RSG G G RY
Sbjct: 290 SPPKADEKERKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRY-------- 341
Query: 293 HHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKF-LKSPPLHKNLDAREK 351
R+P+++ R R R S P QE + + + S D E
Sbjct: 342 ------RTPSRS-------RSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSEL 388
Query: 352 STFRE--ESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKE 409
+ +E SP+R+K HR + +P ++ + K + + +K+
Sbjct: 389 NEIKENQRSPVRVKERKITDHR---NVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKD 445
Query: 410 QEFRS-IFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTL-NERFTSYQKATE 467
++++ + K SKS +S + S + +E+ +S + +E +K ++
Sbjct: 446 DKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSD 505
Query: 468 ---EHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLR-CDSADLRHD 523
+ R +S E ++++ S S H++ KE++++ + R CD +H
Sbjct: 506 SKGKDQERSRSKEKSKQLE-SKSNEHDHSK-------SKEKDRRAQSRSRECDITKGKHS 557
Query: 524 IDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRS--SSS 581
+ R +ERS+ R S+ R + R + ++ KEY Y++ +R + SR +
Sbjct: 558 YNSRTRERSRSRDRSRRVRSRTHDRDRSRS----KEYHRYREQEYRRRGRSRSRERRTPP 613
Query: 582 SASPSSPSSREEKESKKEREEEFKTHHEMK 611
S S R ++S+ EE ++ ++ K
Sbjct: 614 GRSRSKDRRRRRRDSRSSEREESQSRNKDK 643
Score = 57.8 bits (138), Expect = 4e-08
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 5 NSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNN 64
N ++SKSRS+S +S+S+ K + R R+ S+ R + + ++ + D +
Sbjct: 450 NKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGK 509
Query: 65 RGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRR-----------------HSRSPRR 107
R R + + H +RR +SR+ R
Sbjct: 510 DQERS----RSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRER 565
Query: 108 GRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTK 167
RSR RS + RS + R RSRS+ +R RS S ++P + R ++ +
Sbjct: 566 SRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRR 625
Query: 168 K-AEGEPQEESPLKSKSQ---EEPKDTFEHDPSES 198
+ + +EES ++K + +E K + + SES
Sbjct: 626 RDSRSSEREESQSRNKDKYRNQESKSSHRKENSES 660
Score = 55.5 bits (132), Expect = 2e-07
Identities = 115/619 (18%), Positives = 225/619 (36%), Gaps = 85/619 (13%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
R S S SS S S S SSS S+S S S ++ +S+ + + + R SR ++++ +
Sbjct: 190 RHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSK---KRKKKHRKNSRKHKKEKK 246
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSS 122
+ ++ P+ P +SP +
Sbjct: 247 KRKKSKKSASSESEAENLEAQPQSTVRPEEIPPI--------PENRFLMRKSPPKADEKE 298
Query: 123 QRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRG---SQEKQTKKAEGEPQEESPL 179
+++R R R R +P + P S +R ++ + K G + +P
Sbjct: 299 RKNRERERE-------------RECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRYRTPS 345
Query: 180 KSKSQEEPKDTFEHDPS--ESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPS 237
+S+S++ + + E P + + + +SG+ W + + + SP+
Sbjct: 346 RSRSRDRFRRS-ETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRV--- 401
Query: 238 QSSSCSDAPMLSTVHSAKNTPSQ----HSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIH 293
+ +D +S + KN + H + + R S ++ S
Sbjct: 402 KERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSR 461
Query: 294 HIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKST 353
+S +K ++ +E R RS G D E K + K D++ K
Sbjct: 462 SKSKEKSKSKERDSKHNRNEEKRMRSR--SKGRDHENVKEKE--------KQSDSKGKDQ 511
Query: 354 FREESPLRIKMIASDSHRPE-VKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEF 412
R S + K + S S+ + K K +R +TK + ++ + ++
Sbjct: 512 ERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRD- 570
Query: 413 RSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTR 472
RS + +S S+ + H +EQ ++ R S + R
Sbjct: 571 RSRRVRSRTHDRDRSRSKEY--------HRYREQEYR-------RRGRSRSRERRTPPGR 615
Query: 473 QKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERS 532
+S + RR S S+ R+ ++ +++ +E++ +K +S ++R +S
Sbjct: 616 SRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSES-------EKRMYSKS 668
Query: 533 KERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSRE 592
++ S SRE +K +D + K S QD+ SS + R
Sbjct: 669 RDHNSSNNSRE-------KKADRDQSPFSKIKQSS-----QDNELKSSMLKNKEDEKIRS 716
Query: 593 --EKESKKEREEEFKTHHE 609
EKE++K + +E HE
Sbjct: 717 SVEKENQKSKGQENDHVHE 735
Score = 50.8 bits (120), Expect = 4e-06
Identities = 118/603 (19%), Positives = 217/603 (35%), Gaps = 116/603 (19%)
Query: 163 EKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNS 222
E Q A +P E + S + PK + + + + SS++S D
Sbjct: 155 ENQKTDAASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSSSSSSSSSD----------- 203
Query: 223 PRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSS 282
S ++ SS SD+ + S K +S +H E+ +S
Sbjct: 204 -------SDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSAS 256
Query: 283 RYSPSQNSPIHHIPSRRSPAKTIAPQNAPR-DESRGRSSFYPDGGDQETAKTGKFLKSPP 341
S ++N P T+ P+ P E+R P D++ K
Sbjct: 257 SESEAENL-------EAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKERKN-------- 301
Query: 342 LHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLAST 401
RE+ RE +P +++PAS + RLL +
Sbjct: 302 -------RERERERECNP-------------------------PNSQPASYQR-RLLVTR 328
Query: 402 LVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKE-QYFKSAAMTLNERFT 460
+K R + P S+S S + + H +E Q + ++ ER+
Sbjct: 329 SGRKIKGRGPRR-----YRTP--SRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWI 381
Query: 461 SYQKAT-EEHSTRQKSPEIHRRIDISPSTLRKHTRLA-GEERVFKEENQKGDKKLRCDSA 518
K+ E Q+SP + + + H ++ R ++E + D K
Sbjct: 382 KGDKSELNEIKENQRSP-----VRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKER 436
Query: 519 DLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRS 578
D+R + ++ K ++K + K ++ S S+ +EK+ KS + DSKH R ++
Sbjct: 437 DIRRNSEKDDKYKNKVK---KRAKSKSRSKSKEKS-------KSKERDSKHNRNEEKRMR 486
Query: 579 SSSSASPSSPSSREEKES-----KKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRG 633
S S +EK+S +ER + +++ S S+ + R + R
Sbjct: 487 SRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRS 546
Query: 634 RARGVFAGTNTGPNNSNTTFQKRPKE------EEWDPEYTPKSKKYFLHDDRDDGVDYWA 687
R + G ++ NS T + R ++ +SK+Y + +++ +
Sbjct: 547 RECDITKGKHS--YNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQE-----YR 599
Query: 688 KRGRGRGTFQR---GRGRFNFKKSGSSPKWTHDKYQGDGIVEDEEETMENNEEKKDRRKE 744
+RGR R +R GR R ++ + ++ + +D+ N E K RKE
Sbjct: 600 RRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDK---YRNQESKSSHRKE 656
Query: 745 EKE 747
E
Sbjct: 657 NSE 659
Score = 49.3 bits (116), Expect = 1e-05
Identities = 57/270 (21%), Positives = 106/270 (39%), Gaps = 37/270 (13%)
Query: 495 LAGEERVFKEENQKGD---------KKLRCDSADLRHDIDRRRKERSKERGDSKGSRESS 545
++G+E V + ENQK D + L C + + + K+R K S S S
Sbjct: 145 ISGQEVVREIENQKTDAASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSSSSSSSSSDS 204
Query: 546 GSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFK 605
S ++ D + +S ++ KR++ H + +SR+ K+ KK+R++ K
Sbjct: 205 DSSSDSQSSSDSSDSESATEEKSKKRKKKHRK-----------NSRKHKKEKKKRKKSKK 253
Query: 606 THHEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWD-- 663
+ E ++P+ T F + P + R +E E +
Sbjct: 254 SASSESEAENLE--AQPQSTVRPEEIPPIPENRFLMRKSPPKADEKERKNRERERERECN 311
Query: 664 -PEYTPKSKKYFLHDDRDDGVDYWAKRGRGRG-----TFQRGRGRFNFKKSGSSPKWTHD 717
P P S + L R ++ +GRG T R R R F++S + P W +
Sbjct: 312 PPNSQPASYQRRLLVTRS------GRKIKGRGPRRYRTPSRSRSRDRFRRSETPPHWRQE 365
Query: 718 KYQGDGI-VEDEEETMENNEEKKDRRKEEK 746
+ + V E ++ ++ + + KE +
Sbjct: 366 MQRAQRMRVSSGERWIKGDKSELNEIKENQ 395
Score = 33.9 bits (76), Expect = 0.57
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 2 GRSNSRSHSSRSK-SRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
GRS S+ R + SRS S+SR+ + + S+S R S S RMYS+ +
Sbjct: 614 GRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRK-ENSESEKRMYSKSRDHN 672
Query: 61 YRNN 64
NN
Sbjct: 673 SSNN 676
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 75.9 bits (185), Expect = 1e-13
Identities = 111/492 (22%), Positives = 169/492 (34%), Gaps = 21/492 (4%)
Query: 110 SRSRSPKRRSVSSQRS-RSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKK 168
S S+S S SS S S S S SS S SS S SS S S S S +
Sbjct: 636 SDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSS--SDSSNSSDSSDSS 693
Query: 169 AEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHS 228
E S S + D+ + S S D + +S+ S D + D+S S S
Sbjct: 694 DSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSS 753
Query: 229 PSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQ 288
S ++ S SS SD+ S + N+ + S S + S + SS S S
Sbjct: 754 DSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSS 813
Query: 289 NSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDA 348
+S + + + ++ SS DG D +++ S + D+
Sbjct: 814 DSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDS 873
Query: 349 REKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKK 408
S + S +SDS D SN S + D +S S
Sbjct: 874 SNSSDSSDSSDSNESSNSSDSS-------------DSSNSSDSDSSDSSNSSDSSDSSNS 920
Query: 409 --EQEFRSIFDHIKLPQASKS--TSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQK 464
E + D+ +S S +S+S S + + S + N +S
Sbjct: 921 SDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSS 980
Query: 465 ATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDI 524
+ + S S + D S S+ + + + + + D DS+D
Sbjct: 981 NSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSS 1040
Query: 525 DRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSAS 584
D S + DS S +SS S D + D S+ D S SS SS S
Sbjct: 1041 DSSDSSDSSDSSDSSNSSDSSDS-SDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDS 1099
Query: 585 PSSPSSREEKES 596
S S + +S
Sbjct: 1100 SDSSDSSDSSDS 1111
Score = 67.4 bits (163), Expect = 5e-11
Identities = 103/491 (20%), Positives = 165/491 (33%), Gaps = 26/491 (5%)
Query: 112 SRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEG 171
S S S SS S S S SS S S SS SS S S S + K++
Sbjct: 567 SDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDS 626
Query: 172 EPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSP 231
E S S+ + D+ D S++ D + S++++ + D+S S S S
Sbjct: 627 SKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSS-----DSSDSSDSSDSSSSS 681
Query: 232 IATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSP 291
++ S SS SD+ S + ++ S S + S S + SS S S NS
Sbjct: 682 DSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSS 741
Query: 292 IHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREK 351
S S + + ++ +S S +++ + S + D+ +
Sbjct: 742 ----DSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDS 797
Query: 352 STFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQE 411
S + S +SDS + DS+ +S + D +S +
Sbjct: 798 SNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSS-DSSNSSDSSDSSDSSDGSDSDSS 856
Query: 412 FRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHST 471
RS D +S S+ S S + NE S + +S+
Sbjct: 857 NRS--DSSNSSDSSDSSDSS-------------NSSDSSDSSDSNESSNSSDSSDSSNSS 901
Query: 472 RQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKER 531
S + D S S+ + + + + DS+D + D
Sbjct: 902 DSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSD 961
Query: 532 SKERGDSKGSRESSGSRKQEKT-PKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSS 590
S DS S S S + D + D S D S SS SS S +S S
Sbjct: 962 SSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDS 1021
Query: 591 REEKESKKERE 601
+S +
Sbjct: 1022 SNSSDSSNSSD 1032
Score = 66.6 bits (161), Expect = 8e-11
Identities = 125/603 (20%), Positives = 199/603 (33%), Gaps = 15/603 (2%)
Query: 5 NSRSHSSRSKSRSQSSSRSRSRSHSRKKRYS----SRSRSRTYSRSRSRDRMYSRDYRRD 60
N +S S + KS S S S S + S S S S S + S S D S D
Sbjct: 537 NDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSS 596
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
+N + + S+S + S S
Sbjct: 597 DSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDS 656
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
S + S S S SS S SSSS SS S S S + + + ++ + S
Sbjct: 657 SDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSS 716
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
S D+ + S+S D N S S D ++ D+S S S S ++ S SS
Sbjct: 717 DSSNSNSSDSDSSNSSDSSDSSNSSD--SSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSS 774
Query: 241 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRS 300
SD+ S + + N+ S S S S + S S + S S S NS S S
Sbjct: 775 DSSDSSNSSDSNDSSNS-SDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSS 833
Query: 301 PAKTIAPQNAPRDESRGRSSFYPDGGDQ----ETAKTGKFLKSPPLHKNLDAREKSTFRE 356
+ + + D S G S + D +++ + S + D+ E S +
Sbjct: 834 DSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSD 893
Query: 357 ESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIF 416
S + S DS+ ++ + + + + S + S
Sbjct: 894 SSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNS 953
Query: 417 DHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSP 476
S ++S+S + ++ + + +S + + S S
Sbjct: 954 SDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1013
Query: 477 EIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSA---DLRHDIDRRRKERSK 533
+ D S S+ ++ + + + + D DS+ D D S
Sbjct: 1014 DSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSS 1073
Query: 534 ERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREE 593
+ DS S ESS S D + D S D S SS SS S S S +
Sbjct: 1074 DSSDSSDSSESSDS-SDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDS 1132
Query: 594 KES 596
+S
Sbjct: 1133 SDS 1135
Score = 63.5 bits (153), Expect = 7e-10
Identities = 137/617 (22%), Positives = 191/617 (30%), Gaps = 63/617 (10%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRN 63
S S S SS S S+S SS + S S S + S + S S D S D N
Sbjct: 627 SKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSS-SSDSSN 685
Query: 64 NRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQ 123
+ N S S S S S SS
Sbjct: 686 SSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSD 745
Query: 124 RS-RSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSK 182
S S S S SS S SS S SS S S S + ++ S S
Sbjct: 746 SSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSN 805
Query: 183 SQE--EPKDTFEHDPSESIDEFNKS----------SATSGDIWPGLSAYDNSPRSPHSPS 230
S + + D+ + D S S D N S S+ S D G S D+S RS S S
Sbjct: 806 SSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDG-SDSDSSNRSDSSNS 864
Query: 231 PIATPPSQSSSCSDAPMLSTVHSAKNTP--SQHSHSIQHSPERSGSGSVGNGSSRYSPSQ 288
++ S SS+ SD+ S + + N+ S S+S S + S + SS S S
Sbjct: 865 SDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSS 924
Query: 289 NSPIHHIPSRRSPAKTIAPQNAPRDESRGR-------SSFYPDGGDQETAKTGKFLKSPP 341
S S S + + + D S SS D D ++ + S
Sbjct: 925 ESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSD 984
Query: 342 LHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLAST 401
+ D+ + S + S +SDS D SN S S+
Sbjct: 985 SSDSSDSSDSSDSSDSSNSSDSSDSSDSS-------------DSSNSSDSSNSSDSSNSS 1031
Query: 402 LVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTS 461
+ D +S S+ S + +S
Sbjct: 1032 DSSDSSDSSDSSDSSDSSDSSDSSNSSDSS------------------------DSSDSS 1067
Query: 462 YQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLR 521
+ + S S E D S S+ + + + + + D +S+D
Sbjct: 1068 DSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSS 1127
Query: 522 HDIDRRRKERSKERGDSKGSRESSGS--RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSS 579
D S DS S ESS S D + D S D S SS
Sbjct: 1128 DSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSS 1187
Query: 580 SSSASPSSPSSREEKES 596
SS S S S + +S
Sbjct: 1188 DSSDSSDSSDSSDSSDS 1204
Score = 62.8 bits (151), Expect = 1e-09
Identities = 124/596 (20%), Positives = 195/596 (32%), Gaps = 19/596 (3%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRN 63
SNS S S S SS S S+S S + S + S S D S D +
Sbjct: 696 SNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDS 755
Query: 64 NRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQ 123
+ + N S S S S + S SS
Sbjct: 756 SDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDS-SDSSNSSDSSNSSDSSDSSD 814
Query: 124 RSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKK--AEGEPQEESPLKS 181
S S S S SS S SS S +SS S S S + + + +S S
Sbjct: 815 SSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSS 874
Query: 182 KSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSS 241
S + + ++ S S D + S+++ D ++ D+S S S S ++ S +S+
Sbjct: 875 NSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSN 934
Query: 242 CSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSP 301
SD+ S+ S + S S S S + S S + SS S S NS S S
Sbjct: 935 SSDSSN-SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSD 993
Query: 302 AKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPLR 361
+ + + D S S +++ + S + D+ + S + S
Sbjct: 994 SSDSSDSSNSSDSSDSSDSS-DSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1052
Query: 362 IKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKL 421
+SDS + + +S + D +S S S D
Sbjct: 1053 DSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSS-DSSDS 1111
Query: 422 PQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRR 481
+S S+ S +++ + + +S + + S S +
Sbjct: 1112 SDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDS 1171
Query: 482 IDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGS 541
D S S+ + + + + + D DS+D D S + DS S
Sbjct: 1172 SDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1231
Query: 542 RESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESK 597
ESS S D S D S SS SS S S + + +SK
Sbjct: 1232 NESSDS-------------SDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSK 1274
Score = 52.8 bits (125), Expect = 1e-06
Identities = 51/179 (28%), Positives = 73/179 (40%), Gaps = 2/179 (1%)
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
S+ S S S SS S SS S SS S S S + ++ +S
Sbjct: 1121 SNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNS 1180
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKS-SATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQS 239
S S + + D S+S D + S S+ S D + D+S S S S ++ S S
Sbjct: 1181 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDS 1240
Query: 240 SSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGS-VGNGSSRYSPSQNSPIHHIPS 297
S SD+ S + ++ S S S +S SG+ NGS S S+ S +H S
Sbjct: 1241 SDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSDSEGSDSNHSTS 1299
Score = 50.4 bits (119), Expect = 6e-06
Identities = 88/468 (18%), Positives = 162/468 (34%), Gaps = 15/468 (3%)
Query: 135 SSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHD 194
+S S +SSSR + Y+ S SK G+ +K AE + + + + S +D
Sbjct: 478 NSESDNNSSSRGDASYN-SDESKDNGNGS-DSKGAEDDDSDSTSDTNNSDSNGNGNNGND 535
Query: 195 PSESIDEFN-KSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHS 253
++ D KS ++ D ++ D+S S S + SS SD+ S S
Sbjct: 536 DNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDS 595
Query: 254 AKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRD 313
+ ++ S S S + S S + S S S+ S S+ + + + ++
Sbjct: 596 SDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSE-SDSSDSDSKSDSSDSNSSDSSDNS 654
Query: 314 ESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPE 373
+S S+ +++ + S + D+ + S S +SDS
Sbjct: 655 DSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSS- 713
Query: 374 VKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFI 433
D S+ S + D +++ S S S +S+S
Sbjct: 714 ----------DSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSN 763
Query: 434 QHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHT 493
S + S + N+ S + +S+ + S + ++
Sbjct: 764 SSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNS 823
Query: 494 RLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKT 553
+ + + D DS+D R + S S S S+ S + +
Sbjct: 824 SDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSS 883
Query: 554 PKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKERE 601
+ S DS + + D S SS+SS S S +S + ES +
Sbjct: 884 DSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSD 931
Score = 48.1 bits (113), Expect = 3e-05
Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
S + S S S SS S SS+S SS S+S S + ++ +S
Sbjct: 1118 SDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDS 1177
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKS-SATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQS 239
S S + + D S+S D + S S+ S D + D+S S S S + S S
Sbjct: 1178 SNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDS 1237
Query: 240 SSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQN 289
S SD+ S + ++ + + E GNG++ S S +
Sbjct: 1238 SDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDS 1287
Score = 42.7 bits (99), Expect = 0.001
Identities = 54/226 (23%), Positives = 79/226 (34%), Gaps = 2/226 (0%)
Query: 110 SRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKA 169
S + S S S S S S S S S SS SS+ S S S + + +
Sbjct: 1054 SSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSD-SSDSS 1112
Query: 170 EGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKS-SATSGDIWPGLSAYDNSPRSPHS 228
+ +S S S + + D S S D + S S+ S D + D+S S S
Sbjct: 1113 DSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSS 1172
Query: 229 PSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQ 288
S ++ S SS SD+ S + ++ S S S + SS S S
Sbjct: 1173 DSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSN 1232
Query: 289 NSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTG 334
S S S + + + D S S + Q + G
Sbjct: 1233 ESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNG 1278
Score = 30.4 bits (67), Expect = 6.3
Identities = 29/130 (22%), Positives = 43/130 (33%), Gaps = 29/130 (22%)
Query: 502 FKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGD----------------SKGSRE-- 543
F +++ +GD D ++ D + S RGD SKG+ +
Sbjct: 455 FDDKSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDD 514
Query: 544 -----------SSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSRE 592
S+G+ D + K DS D S SS SS S S SS
Sbjct: 515 SDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDS 574
Query: 593 EKESKKEREE 602
S + +
Sbjct: 575 NSSSDSDSSD 584
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 73.2 bits (178), Expect = 8e-13
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 23/186 (12%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
+ S + + K R S RS SRS SR++R+ SRSR R SRSRSR+R SR R+
Sbjct: 43 LNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRE 102
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
+ +R R R R R + +R +RS R RSRSR K+R
Sbjct: 103 RKKSRSRSRERKRRIRSRSRSRSR-------------HRHRTRSRSRTRSRSRDRKKRIE 149
Query: 121 SSQR-SRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPL 179
+R SRS SR + SP R+++ ++ +++R ++ KK + + ++E
Sbjct: 150 KPRRFSRSLSR-----TPSPPPFRGRNTAMDAQEALARRL----ERAKKLQEQREKEMVE 200
Query: 180 KSKSQE 185
K K QE
Sbjct: 201 KQKQQE 206
Score = 55.1 bits (131), Expect = 2e-07
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 12 RSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPY 71
R +S+ +SS + +S H+ K+ S + R R S DR R++ +++RG
Sbjct: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDR----HKRKERKSSRGRSHS- 67
Query: 72 GYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRR 131
R R R R HR R R SRS R +SRSRS +R+ +SRSRSR
Sbjct: 68 --RSRSRE-------RRHRSRSRERKKSR-SRSRERKKSRSRSRERK-----KSRSRSRE 112
Query: 132 SYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEP 187
R RS S SR ++ R S+ + KK +P+ S S++ P
Sbjct: 113 RKRRIRSRSRSRSRHR---HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPP 165
Score = 47.0 bits (110), Expect = 6e-05
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 456 NERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRC 515
N++ S K E ++ + + H+R + S R H+R ER + +++ KK R
Sbjct: 30 NDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRE-RKKSRS 88
Query: 516 DSADLRHDIDRRR-----KERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHK 570
S + + R R + RS+ER SR S SR + +T + +S D K +
Sbjct: 89 RSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT-RSRSRTRSRSRDRKKR 147
Query: 571 REQDHSRSSSSSASPSSPSSR------EEKESKKEREEEFKTHHEMKE 612
E+ S S S +PS P R + +E+ R E K E +E
Sbjct: 148 IEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQRE 195
Score = 45.1 bits (105), Expect = 2e-04
Identities = 56/227 (24%), Positives = 86/227 (37%), Gaps = 37/227 (16%)
Query: 458 RFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDS 517
R + K H ++ KS + H+ + + ++H+ G ER+ EN +
Sbjct: 3 RTNFFLKQGRRHESKDKSSKKHKSEEHND---KEHSSDKGRERLNSSENGED-------- 51
Query: 518 ADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSR 577
RH +RKER RG S SR S R+ ++ K+ +S RE+ SR
Sbjct: 52 ---RH----KRKERKSSRGRSH-SRSRSRERRHRSRSRERKKSRS------RSRERKKSR 97
Query: 578 SSSSSASPSSPSSREEKESKKEREEEFKTH-HEMKEYSGFAGVSRPR-------GTFFRI 629
S S S SRE K + R H H + S SR R F R
Sbjct: 98 SRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRS 157
Query: 630 RGRGRARGVFAGTNTGPNNSNTTFQK----RPKEEEWDPEYTPKSKK 672
R + F G NT + ++ + +E+ + E K K+
Sbjct: 158 LSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQ 204
Score = 34.3 bits (77), Expect = 0.43
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 99 RRHS---RSPRRGRSRSRSPKRRSVSSQRSRSRS---------RRSYRSSRSPRSSSSRS 146
RRH +S ++ +S + K S R R S R+ +SSR S SRS
Sbjct: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS 71
Query: 147 SS--PYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPK 188
S+S K+ S+ ++ KK+ +E +S+S+E +
Sbjct: 72 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR 115
Score = 30.0 bits (66), Expect = 8.2
Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 14/187 (7%)
Query: 441 HHVKEQYFKSAAMTLN--ERFTSYQKATEEHSTRQKSPEIHR---RIDISPSTLRKHTRL 495
H+ KE LN E K E S+R +S R R S S RK +R
Sbjct: 29 HNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRS 88
Query: 496 AGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKE----RGDSKGSRESSGSRKQE 551
ER + KK R S + + I R + RS+ R S+ S +K+
Sbjct: 89 RSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRI 148
Query: 552 KTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREE-KESKKEREEEFKTHHEM 610
+ P+ + S R R+++ A + E K+ +++RE+E +
Sbjct: 149 EKPRRFSRSLSRTPSPPPFR----GRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQ 204
Query: 611 KEYSGFA 617
+E + A
Sbjct: 205 QEIAAAA 211
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 73.2 bits (178), Expect = 8e-13
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 23/186 (12%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
+ S + + K R S RS SRS SR++R+ SRSR R SRSRSR+R SR R+
Sbjct: 102 LNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRE 161
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
+ +R R R R R + +R +RS R RSRSR K+R
Sbjct: 162 RKKSRSRSRERKRRIRSRSRSRSR-------------HRHRTRSRSRTRSRSRDRKKRIE 208
Query: 121 SSQR-SRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPL 179
+R SRS SR + SP R+++ ++ +++R ++ KK + + ++E
Sbjct: 209 KPRRFSRSLSR-----TPSPPPFRGRNTAMDAQEALARRL----ERAKKLQEQREKEMVE 259
Query: 180 KSKSQE 185
K K QE
Sbjct: 260 KQKQQE 265
Score = 67.0 bits (162), Expect = 6e-11
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 15/186 (8%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
+S++ RS+SRS+ R S+ S KK S + +S + R+R+ S + D R
Sbjct: 53 KSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGED-R 111
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR-RSVS 121
+ R R+ RGR + R R +R SR ++ RSRSR K+ RS S
Sbjct: 112 HKRKERK----SSRGRS--------HSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRS 159
Query: 122 SQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKS 181
+R +SRSR R R S SRS + S+ R S+ + KK +P+ S S
Sbjct: 160 RERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTR-SRSRDRKKRIEKPRRFSRSLS 218
Query: 182 KSQEEP 187
++ P
Sbjct: 219 RTPSPP 224
Score = 66.2 bits (160), Expect = 1e-10
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 17/188 (9%)
Query: 6 SRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNR 65
S+ H SRS+SRS+ R +S + +++ SRSRS+ R S+D+ S+ ++ + N++
Sbjct: 36 SKHHYSRSRSRSRERKR---KSDNEGRKHRSRSRSKEGRRHESKDKS-SKKHKSEEHNDK 91
Query: 66 GMRRPYGYRGRGR-GYYQGGGGRYHRGGYRPVWNRRHSRS---PRRGRSRSRSPKRRSVS 121
+GR R + G R+ R + R HSRS RR RSRSR K+
Sbjct: 92 EHSSD---KGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKK---- 144
Query: 122 SQRSRSRSRRSYRS-SRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
RSRSR R+ RS SR + S SRS + R S+ + ++ + S +
Sbjct: 145 -SRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDR 203
Query: 181 SKSQEEPK 188
K E+P+
Sbjct: 204 KKRIEKPR 211
Score = 48.9 bits (115), Expect = 2e-05
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 8/177 (4%)
Query: 465 ATEEHSTRQKSPEIHRRIDISPSTLRKH---TRLAGEERVFKEENQKGDKKLRCDSAD-L 520
A E+ S + + + +SP + H +R ER K +N+ + R S +
Sbjct: 12 APEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGR 71
Query: 521 RHDI-DRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSS 579
RH+ D+ K+ E + K SS ++ + E + + + K R + HSRS
Sbjct: 72 RHESKDKSSKKHKSEEHNDK--EHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSR 129
Query: 580 SSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRAR 636
S S SRE K+S+ E K+ +E SR R R R R R+R
Sbjct: 130 SRERRHRS-RSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR 185
Score = 47.4 bits (111), Expect = 5e-05
Identities = 53/258 (20%), Positives = 97/258 (37%), Gaps = 19/258 (7%)
Query: 495 LAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKER---GDSKGSRESSGSRKQE 551
LA E+ + +K ++ +H R R RS+ER D++G + S SR +E
Sbjct: 11 LAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRS-RSRERKRKSDNEGRKHRSRSRSKE 69
Query: 552 KTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMK 611
+ K+ S K S+ +++HS SS + + + K+ + ++H +
Sbjct: 70 GRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSR 129
Query: 612 EYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSK 671
SR R R R R ++R + S + R + E +S+
Sbjct: 130 --------SRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSR 181
Query: 672 KYFLHDDRDDGVDYWAKRGRGRGTFQRGRGRF--NFKKSGSSPKWTHDKYQGDGIVEDEE 729
H R R R R RF + ++ S P ++G D +
Sbjct: 182 SRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPP-----PFRGRNTAMDAQ 236
Query: 730 ETMENNEEKKDRRKEEKE 747
E + E+ + +E++E
Sbjct: 237 EALARRLERAKKLQEQRE 254
Score = 47.0 bits (110), Expect = 6e-05
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 456 NERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRC 515
N++ S K E ++ + + H+R + S R H+R ER + +++ KK R
Sbjct: 89 NDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRE-RKKSRS 147
Query: 516 DSADLRHDIDRRR-----KERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHK 570
S + + R R + RS+ER SR S SR + +T + +S D K +
Sbjct: 148 RSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT-RSRSRTRSRSRDRKKR 206
Query: 571 REQDHSRSSSSSASPSSPSSR------EEKESKKEREEEFKTHHEMKE 612
E+ S S S +PS P R + +E+ R E K E +E
Sbjct: 207 IEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQRE 254
Score = 34.7 bits (78), Expect = 0.33
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 104 SPRRGRSRSRS-----PKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKR 158
SP R + + +S P+ RSRSRSR R S + R S+S +R
Sbjct: 17 SPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKS----DNEGRKHRSRSRSKEGRR 72
Query: 159 RGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSS 206
S++K +KK + E + S E ++ E+ + KSS
Sbjct: 73 HESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSS 120
Score = 30.0 bits (66), Expect = 8.2
Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 14/187 (7%)
Query: 441 HHVKEQYFKSAAMTLN--ERFTSYQKATEEHSTRQKSPEIHR---RIDISPSTLRKHTRL 495
H+ KE LN E K E S+R +S R R S S RK +R
Sbjct: 88 HNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRS 147
Query: 496 AGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKE----RGDSKGSRESSGSRKQE 551
ER + KK R S + + I R + RS+ R S+ S +K+
Sbjct: 148 RSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRI 207
Query: 552 KTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREE-KESKKEREEEFKTHHEM 610
+ P+ + S R R+++ A + E K+ +++RE+E +
Sbjct: 208 EKPRRFSRSLSRTPSPPPFR----GRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQ 263
Query: 611 KEYSGFA 617
+E + A
Sbjct: 264 QEIAAAA 270
>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
Length = 344
Score = 72.8 bits (177), Expect = 1e-12
Identities = 61/177 (34%), Positives = 76/177 (42%), Gaps = 18/177 (10%)
Query: 13 SKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRPYG 72
S RS S SRSRSRS R SRSRSR SRSRSR SR R R R G
Sbjct: 186 SHRRSYSGSRSRSRSRRR-----SRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKG 240
Query: 73 YRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRS 132
+ R + + R R + +S R RSRSRSPK +S+SRSR
Sbjct: 241 RKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKS--RSRSRSRSPKENGKGDIKSKSRSR-- 296
Query: 133 YRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKD 189
S SRS+SP P R S + + + S +S+S+ +D
Sbjct: 297 ---------SQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD 344
Score = 71.2 bits (173), Expect = 3e-12
Identities = 63/180 (35%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 101 HSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRG 160
+ R+ R + R+ RRS S RSRSRSRR RS RS RSS SRS S SKS R
Sbjct: 172 NGRNIRLIEDKPRTSHRRSYSGSRSRSRSRRRSRS-RSRRSSRSRSRS-ISKSRSRSRSR 229
Query: 161 SQEKQTKKAEGEPQEESPLKSKSQEEPKD---TFEHDPSESIDEFNKSSATSGDIWP--- 214
S+ + +++G +SKS+ +PK + H S S DE+ KS + S P
Sbjct: 230 SKGRSRSRSKGRKS-----RSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKEN 284
Query: 215 ---GLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPER 271
+ + S S SP+ PPS++ S S P +T S + S+ S S S R
Sbjct: 285 GKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSK-SRSRSRSSSR 343
Score = 68.6 bits (166), Expect = 2e-11
Identities = 60/153 (39%), Positives = 75/153 (49%), Gaps = 30/153 (19%)
Query: 3 RSNSRSHS-SRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
RS SRS S SRS+SRS+S RSRSRS RK R S+S+ ++ S S R S+D +Y
Sbjct: 213 RSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKD---EY 269
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSP------ 115
+R R + G+G + S+S R +SRS SP
Sbjct: 270 EKSRSRSRSRSPKENGKGDIK-------------------SKSRSRSQSRSNSPLPVPPS 310
Query: 116 KRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSS 148
K RSVS R+ SR R SRS S SRSSS
Sbjct: 311 KARSVSPPPKRATSRSRSR-SRSKSRSRSRSSS 342
Score = 50.1 bits (118), Expect = 8e-06
Identities = 54/201 (26%), Positives = 75/201 (37%), Gaps = 50/201 (24%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
M R+ + + R+ + R+ R+ SRSRSR+ RSRSR R SR
Sbjct: 159 MKRALDKLDGTEINGRNIRLIEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRS---- 214
Query: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
SRS + RSRSRS RS
Sbjct: 215 ----------------------------------------RSRSISKSRSRSRS---RSK 231
Query: 121 SSQRSRSRSRRSYRSSRS-PRS--SSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEES 177
RSRS+ R+S S+S P+S S S SK K R ++ K G+ +S
Sbjct: 232 GRSRSRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKS 291
Query: 178 PLKSKSQEEPKDTFEHDPSES 198
+S+SQ PS++
Sbjct: 292 KSRSRSQSRSNSPLPVPPSKA 312
Score = 38.1 bits (87), Expect = 0.030
Identities = 37/149 (24%), Positives = 51/149 (34%), Gaps = 17/149 (11%)
Query: 461 SYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVF---KEENQKGDKKLRCDS 517
S ++ +R + R IS S R +R G R ++ K K + D
Sbjct: 196 SRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDR 255
Query: 518 ADLRHDIDRRRKERSKERGDSKG--------------SRESSGSRKQEKTPKDYKEYKSY 563
H R + E K R S+ SR S SR P + +S
Sbjct: 256 GSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSV 315
Query: 564 KDDSKHKREQDHSRSSSSSASPSSPSSRE 592
K + SRS S S S S SSR+
Sbjct: 316 SPPPKRATSRSRSRSRSKSRSRSRSSSRD 344
Score = 37.4 bits (85), Expect = 0.051
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 480 RRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRR-KERSKERGDS 538
R I+ P T H R R ++ + R S I + R + RS+ +G S
Sbjct: 177 RLIEDKPRT--SHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRS 234
Query: 539 KGSRESSGSRKQEKT-PKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESK 597
+ + SR + K+ PK + S+ S+ K E + SRS S S SP + K
Sbjct: 235 RSRSKGRKSRSKSKSKPKSDRGSHSHSR-SRSKDEYEKSRSRSRSRSPKENGKGDIKSKS 293
Query: 598 KEREE 602
+ R +
Sbjct: 294 RSRSQ 298
Score = 36.2 bits (82), Expect = 0.11
Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 13/143 (9%)
Query: 529 KERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSP 588
K R+ R GSR S SR++ +S S R + S+S S S S S
Sbjct: 182 KPRTSHRRSYSGSRSRSRSRRRS---------RSRSRRSSRSRSRSISKSRSRSRSRSKG 232
Query: 589 SSREEKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGRARGVFAGTNTGPNN 648
SR + +K R + K+ + S SR + + + R R R+R + G +
Sbjct: 233 RSRSRSKGRKSRSKS-KSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSR---SPKENGKGD 288
Query: 649 SNTTFQKRPKEEEWDPEYTPKSK 671
+ + R + P P SK
Sbjct: 289 IKSKSRSRSQSRSNSPLPVPPSK 311
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 71.6 bits (174), Expect = 2e-12
Identities = 58/137 (42%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
RS SRS SRS SRS S S SRSRS SR R SS S+SR+ S SR R R R R
Sbjct: 203 RSKSRSSHSRSSSRSSSPSSSRSRSRSRS-RSSSSSQSRSRSSSRERSRSRGSKSRSSSR 261
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSP-------RRGRSRSRSP 115
++RG P R R Y P NR+ SRS ++ R+RSRSP
Sbjct: 262 SHRGSSSP-----RKRSYSSSSSS--------PERNRKRSRSRSSSSGDRKKRRTRSRSP 308
Query: 116 KRRSVSSQRSRSRSRRS 132
+RR SS S RS
Sbjct: 309 ERRHRSSSGSSHSGSRS 325
Score = 70.1 bits (170), Expect = 7e-12
Identities = 57/155 (36%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRS--RTYSRSRSRDRMYSRDYR 58
+ + N + ++ +S+ RSRS+S S R SSRS S + SRSRSR R S
Sbjct: 180 LSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQS 239
Query: 59 RDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWN--RRHSRSPRRGRSRSRSPK 116
R ++R R R RG R HRG P S SP R R RSRS
Sbjct: 240 RSRSSSR-------ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRS 292
Query: 117 RRSVSSQRSRSRSR---RSYRSSRSPRSSSSRSSS 148
S ++ R+RSR R +RSS S SRSSS
Sbjct: 293 SSSGDRKKRRTRSRSPERRHRSSSGSSHSGSRSSS 327
Score = 62.8 bits (151), Expect = 1e-09
Identities = 59/182 (32%), Positives = 74/182 (40%), Gaps = 48/182 (26%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
+SN RS S S S+SSSRS S S SR + SRSRSR+ S S+SR R SR+
Sbjct: 197 KSNRRSRSKSRSSHSRSSSRSSSPSSSRSR---SRSRSRSSSSSQSRSRSSSRE------ 247
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSS 122
R R RG +SRS S R SS
Sbjct: 248 -----------RSRSRG----------------------------SKSRSSSRSHRGSSS 268
Query: 123 QRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSK 182
R RS S S R+ + S SRSSS + R S E++ + + G S SK
Sbjct: 269 PRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSGSRSSSK 328
Query: 183 SQ 184
+
Sbjct: 329 KK 330
Score = 52.8 bits (125), Expect = 1e-06
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 102 SRSPRRGRSRSRSPKRRSVSSQ---------RSRSRSRRSYRSSRSPRSSSSRSSSPYSK 152
S SP RSRSRS R S SSQ RSRSR +S SSRS R SSS YS
Sbjct: 217 SSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSS 276
Query: 153 SPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQE 185
S S R + +++ + +++ +S+S E
Sbjct: 277 SSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPE 309
Score = 47.8 bits (112), Expect = 4e-05
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 2/187 (1%)
Query: 456 NERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDK-KLR 514
N + +++ E+ + + +R + P+++ K E ++E++ K KL
Sbjct: 111 NVEYIEREESDGEYDEFGRKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLD 170
Query: 515 CDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQD 574
D + D+ + + S+E DS + + SR + ++ +S S R +
Sbjct: 171 EDEDEDDADLSKYNLDASEEE-DSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRS 229
Query: 575 HSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIRGRGR 634
SRSSSSS S S SSRE S+ + H S + R R R R
Sbjct: 230 RSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSR 289
Query: 635 ARGVFAG 641
+R +G
Sbjct: 290 SRSSSSG 296
Score = 47.4 bits (111), Expect = 5e-05
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 103 RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQ 162
+S RR RS+SRS RS SS+ S S RS SRS SSSS+S S S S+ RGS+
Sbjct: 197 KSNRRSRSKSRSSHSRS-SSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSK 255
Query: 163 EKQTKKA---EGEPQEESPLKSKSQEE 186
+ + ++ P++ S S S E
Sbjct: 256 SRSSSRSHRGSSSPRKRSYSSSSSSPE 282
Score = 47.4 bits (111), Expect = 5e-05
Identities = 41/124 (33%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Query: 87 RYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRS 146
R R R +R SRS SRSRS + RS SS S+SRSR S R R S SRS
Sbjct: 200 RRSRSKSRSSHSRSSSRSSSPSSSRSRS-RSRSRSSSSSQSRSRSSSRERSRSRGSKSRS 258
Query: 147 SSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSS 206
SS + S R+ S + E + S S + K E + S
Sbjct: 259 SSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGS 318
Query: 207 ATSG 210
+ SG
Sbjct: 319 SHSG 322
Score = 43.5 bits (101), Expect = 7e-04
Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 145 RSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNK 204
R Y V +E + K++EGE ++E SK + D E + + ++N
Sbjct: 129 RKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYK---LDEDEDEDDADLSKYNL 185
Query: 205 SSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHS---AKNTPSQH 261
++ D S S R S S + S+SSS S +P S S ++++ S
Sbjct: 186 DASEEED-----SNKKKSNRRSRSKS--RSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQ 238
Query: 262 SHSIQHSPERSGS-GSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSS 320
S S S ERS S GS SSR +SP +RS + + + R SR RSS
Sbjct: 239 SRSRSSSRERSRSRGSKSRSSSRSHRGSSSP-----RKRSYSSSSSSPERNRKRSRSRSS 293
Query: 321 FYPDGGDQETAKT 333
GD++ +T
Sbjct: 294 ---SSGDRKKRRT 303
Score = 42.7 bits (99), Expect = 0.001
Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 8/131 (6%)
Query: 114 SPKRRSVSSQRSRSRSRRSYRSSRS--PRSSSSRSSSPYSKSPVSKRRG-SQEKQTKKAE 170
S K++S RS+SRS S SSRS P SS SRS S S S+ R S ++ ++
Sbjct: 193 SNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSR 252
Query: 171 GEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPS 230
G S + P+ S S + K S + S+ D R S S
Sbjct: 253 GSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSS-----SSGDRKKRRTRSRS 307
Query: 231 PIATPPSQSSS 241
P S S S
Sbjct: 308 PERRHRSSSGS 318
Score = 41.2 bits (95), Expect = 0.004
Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 13/154 (8%)
Query: 121 SSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
+S+ S ++S R SRS SS SS S SP S R S+ + + + + S +
Sbjct: 187 ASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSR 246
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
+S+ S + S + G P +Y +S SP + S+SS
Sbjct: 247 ERSR-----------SRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSR--SRSS 293
Query: 241 SCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGS 274
S D T + + S HS RS S
Sbjct: 294 SSGDRKKRRTRSRSPERRHRSSSGSSHSGSRSSS 327
Score = 37.0 bits (84), Expect = 0.067
Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 12/142 (8%)
Query: 467 EEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDR 526
EE S ++KS R S H+R + + + R S+
Sbjct: 190 EEDSNKKKSNRRSRSKSRS-----SHSRSSSRSSSPSSSRSRSRSRSRSSSSS-----QS 239
Query: 527 RRKERSKERGDSKGSRESSGSRKQEKTPKDYK-EYKSYKDDSKHKREQDHSRSSSSSASP 585
R + S+ER S+GS+ S SR + K Y S + R++ SR SSSS
Sbjct: 240 RSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSR-SSSSGDR 298
Query: 586 SSPSSREEKESKKEREEEFKTH 607
+R ++ R +H
Sbjct: 299 KKRRTRSRSPERRHRSSSGSSH 320
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 71.2 bits (173), Expect = 3e-12
Identities = 184/826 (22%), Positives = 291/826 (35%), Gaps = 166/826 (20%)
Query: 5 NSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNN 64
NS S S S SS S RS SR R SRS SR+Y+RSRS +SR
Sbjct: 670 NSESDQSTYSKYSDRSSESSPRSRSRSSR--SRSYSRSYTRSRSLASSHSRS-------- 719
Query: 65 RGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRR----GRSRSRSPKRRSV 120
R R R Y Y + + R+ RR G+ S S K+ S
Sbjct: 720 ----RSPSSRSHSRNKYSDHSQCSRSSSYTSISSDDGRRAKRRLRSSGKKNSVSHKKHSS 775
Query: 121 SSQ----------RSRSRSRRSYRSSRSP---RSSSSRSSSPYSKSPVSK-RRGSQEKQT 166
SS+ R RS R Y SRS S S +SS ++S K ++G E+
Sbjct: 776 SSEKTLHSKYVKGRDRSSCVRKYSESRSSLDYSSDSEQSSVQATQSAQEKEKQGQMERTH 835
Query: 167 KKAEGEPQEESPLKSKSQEE----PKDTFEHDPSESIDEFNKSSATS--GDIWPGLSAYD 220
K E EE KSKS+ E K T + + S+ + +K + G W S +
Sbjct: 836 NKQEKNRGEE---KSKSERECPHSKKRTLKENLSDHLRNGSKPKRKNYAGSKWDSESNSE 892
Query: 221 -----NSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSG 275
NS H S + S S S+ +S +H K P+ S + P+ +G+
Sbjct: 893 RDVTKNSKNDSHPSSDKEEGEATSDSESE---VSEIH-IKVKPTTKSSTNTSLPDDNGAW 948
Query: 276 SVGNGSSRYSPSQNSPIHHIPSRRSPA--KTIAPQNAPRDESRGRSSFYPDGGDQETAKT 333
+ S S+ S + +R P K + +N R+ T K
Sbjct: 949 KSSKQRTSTSDSEGSCSNSENNRGKPQKHKHGSKENLKREH---------------TKKV 993
Query: 334 GKFLKSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLT 393
+ LK K+ + K F + PL E ++ V + + S
Sbjct: 994 KEKLKGKKDKKHKAPKRKQAFHWQPPLEF------GEEEEEEIDDKQVTQESKEKKVSEN 1047
Query: 394 KDRLLASTLVHSVKKEQEFRSIFDHIK----LPQASKSTSESFI--------QHIVSL-- 439
+ + + L E++ D + L Q +K S+ I +++ L
Sbjct: 1048 NETIKDNILKTEKSSEEDLSGKHDTVTVSSDLDQFTKDDSKLSISPTALNTEENVACLQN 1107
Query: 440 VHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQK----SPEIHRRIDISPSTLRKHTRL 495
+ HV+E L + + + T + S+ K SP + R+D + +
Sbjct: 1108 IQHVEESVPNGVEDVL-QTDDNMEICTPDRSSPAKVEETSPLGNARLDTPDINIVLKQDM 1166
Query: 496 AGEE---RVFKEENQKGDKKLRCD-------SADLRHDIDRRRKERSKERG-----DSKG 540
A E V K+E+ + K+ + SA L + K+ E+ D K
Sbjct: 1167 ATEHPQAEVVKQESSMSESKVLGEVGKQDSSSASLASAGESTGKKEVAEKSQINLIDKKW 1226
Query: 541 S-----------------------------RESSGSRKQEKTPKDYKEYKSYKDDSKHKR 571
+ G R + K+ + + + K R
Sbjct: 1227 KPLQGVGNLAAPNAATSSAVEVKVLTTVPEMKPQGLRIEIKSKNKVRPGSLFDEVRKTAR 1286
Query: 572 EQDHSRSSSSSASPSSPS----SREEKESKKEREEEFKTHHEMKE--YSGFAGVSRPRGT 625
R+ SS+ +PS S+ S+ + E K+ H + YS SR +
Sbjct: 1287 LNRRPRNQESSSDEQTPSRDDDSQSRSPSRSRSKSETKSRHRTRSVSYSHSRSRSRSSTS 1346
Query: 626 FFRIRG--RGRARGVFAGTNTGPNNSN--------TTFQKRPKEEEWDPEYTPKSKKYFL 675
+R R R R+RG ++ T +S+ T+ + R + +DP +S Y
Sbjct: 1347 SYRSRSYSRSRSRGWYSRGRTRSRSSSYRSYKSHRTSSRSRSRSSSYDPHSRSRSYTY-- 1404
Query: 676 HDDRDDGVDYWAKRGRGRGTFQRG----RGRFNFKKSGSSPKWTHD 717
D + R R R QR RGR ++S S + D
Sbjct: 1405 --------DSYYSRSRSRSRSQRSDSYHRGRSYNRRSRSCRSYGSD 1442
Score = 70.5 bits (171), Expect = 5e-12
Identities = 65/178 (36%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 4 SNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRN 63
S+ ++ S S+S+S SRSRS+S ++ + R+RS +YS SRSR R + YR
Sbjct: 1298 SDEQTPSRDDDSQSRSPSRSRSKSETKSRH---RTRSVSYSHSRSRSRSSTSSYRS---- 1350
Query: 64 NRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS-- 121
R Y R R RG+Y G R YR + R S S R RS S P RS S
Sbjct: 1351 -----RSYS-RSRSRGWYSRGRTRSRSSSYRSYKSHRTS-SRSRSRSSSYDPHSRSRSYT 1403
Query: 122 --SQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEES 177
S SRSRSR RS RS RS + S+S S S+ ++ P E S
Sbjct: 1404 YDSYYSRSRSRS--RSQRSDSYHRGRSYNRRSRSCRSYGSDSESDRSYSHHRSPSESS 1459
Score = 65.5 bits (158), Expect = 2e-10
Identities = 119/536 (22%), Positives = 202/536 (37%), Gaps = 80/536 (14%)
Query: 93 YRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSP-RSSSSRSSSPYS 151
YRP + S+ + S RS+S QRSRS S Y S S R S
Sbjct: 375 YRPPSGEKWSKGDKLSDPCSSRWDERSLS-QRSRSWSYNGYYSDLSTARHSGHHKKRRKE 433
Query: 152 KSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGD 211
K K++G ++K ++ + + + S + T S + ++SS+
Sbjct: 434 KKVKHKKKGKKQKHCRRHKQTKKRRILIPSDIESSKSSTRRMKSSCDRERSSRSSS---- 489
Query: 212 IWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPER 271
LS++ +S R S S D S HS++++ SHS +S
Sbjct: 490 ----LSSHHSSKRD------------WSKSDKDVQS-SLTHSSRDSYRSKSHSQSYS--- 529
Query: 272 SGSGSVGNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETA 331
GSSR + S H R S+ RSS G ++ A
Sbjct: 530 -------RGSSRSRTASKSSSHS-----------------RSRSKSRSS--SKSGHRKRA 563
Query: 332 KTGKFLKSPPLHKNLDAREKSTFREESPLRIKMIASDSH--RPEVKLKMAPVPLDDSNRP 389
+ L +N + + PLR M +++ +P V + +PL DS P
Sbjct: 564 SKSPRKTASQLSENKPVKTE-------PLRATMAQNENVVVQPVVAENIPVIPLSDSPPP 616
Query: 390 ASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFK 449
+ + S ++ QE ++ H+ LP S + + + S +H +E+ +
Sbjct: 617 SRWKPGQ---KPWKPSYERIQEMKAKTTHL-LPIQSTYSLANIKETGSSSSYHKREKNSE 672
Query: 450 SAAMTLNERFTSYQKATEEHSTRQKSPEIHRR-----IDISPSTLRKHTRLAGEERVFKE 504
S T ++ Y + E S R +S R S S H+R
Sbjct: 673 SDQST----YSKYSDRSSESSPRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHS 728
Query: 505 ENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKD--YKEYKS 562
N+ D +C + I R+K R S G + S +K + + + +Y
Sbjct: 729 RNKYSDHS-QCSRSSSYTSISSDDGRRAKRRLRSSGKKNSVSHKKHSSSSEKTLHSKYVK 787
Query: 563 YKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEE---FKTHHEMKEYSG 615
+D S R+ SRSS +S S SS + +S +E+E++ +TH++ ++ G
Sbjct: 788 GRDRSSCVRKYSESRSSLDYSSDSEQSSVQATQSAQEKEKQGQMERTHNKQEKNRG 843
Score = 65.1 bits (157), Expect = 2e-10
Identities = 142/631 (22%), Positives = 234/631 (37%), Gaps = 101/631 (16%)
Query: 1 MGRSNSRSHSSRSKSRSQSSSRSR-----------SRSHSRKKRYSSRSRSRTYSRSRSR 49
M S R SSRS S S S R S +HS + Y S+S S++YSR SR
Sbjct: 475 MKSSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQSSLTHSSRDSYRSKSHSQSYSRGSSR 534
Query: 50 DRMYSRDYRRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGR 109
R S+ R R + HR +R S+SPR +
Sbjct: 535 SRTASKS---------------SSHSRSRSKSRSSSKSGHR--------KRASKSPR--K 569
Query: 110 SRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKA 169
+ S+ + + V ++ R+ ++ P + + P S SP R +K K +
Sbjct: 570 TASQLSENKPVKTEPLRATMAQNENVVVQPVVAENIPVIPLSDSPPPSRWKPGQKPWKPS 629
Query: 170 EGEPQEESP-----LKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPR 224
QE L +S + E S S + K+S + + S +S
Sbjct: 630 YERIQEMKAKTTHLLPIQSTYSLANIKETGSSSSYHKREKNSESDQSTYSKYSD-RSSES 688
Query: 225 SPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRY 284
SP S S + S S S + + L++ HS +PS SHS ++Y
Sbjct: 689 SPRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHS----------------RNKY 732
Query: 285 SPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKS--PPL 342
S H SR S +I+ + R + R RSS G + + K S L
Sbjct: 733 SD------HSQCSRSSSYTSISSDDGRRAKRRLRSS-----GKKNSVSHKKHSSSSEKTL 781
Query: 343 H-KNLDAREKST-FREESPLRIKM-IASDSHRPEV--------KLKMAPVPLDDSNRPAS 391
H K + R++S+ R+ S R + +SDS + V K K + + + +
Sbjct: 782 HSKYVKGRDRSSCVRKYSESRSSLDYSSDSEQSSVQATQSAQEKEKQGQMERTHNKQEKN 841
Query: 392 LTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSA 451
+++ + KK ++ DH++ SK +++ + + K++
Sbjct: 842 RGEEKSKSERECPHSKKRTLKENLSDHLR--NGSKPKRKNYAGSKWDSESNSERDVTKNS 899
Query: 452 AMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRK-HTRLAGEERVFKEENQKGD 510
N+ S K E ++ +S I + P+T +T L + +K Q
Sbjct: 900 K---NDSHPSSDKEEGEATSDSESEVSEIHIKVKPTTKSSTNTSLPDDNGAWKSSKQ--- 953
Query: 511 KKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHK 570
R ++D R K + GS+E + K+E T K KE K D KHK
Sbjct: 954 ---RTSTSDSEGSCSNSENNRGKPQKHKHGSKE---NLKREHT-KKVKEKLKGKKDKKHK 1006
Query: 571 REQDHSRSSSSSASPSSPSSREEKESKKERE 601
+ R + P EE+E +++
Sbjct: 1007 APK---RKQAFHWQPPLEFGEEEEEEIDDKQ 1034
Score = 63.5 bits (153), Expect = 7e-10
Identities = 147/688 (21%), Positives = 235/688 (34%), Gaps = 108/688 (15%)
Query: 2 GRSNSRSHS---SRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYR 58
GR R H+ SRS S S S + H +++ R R Y R S ++ D
Sbjct: 335 GRGTIRYHTPPRSRSCSESDDDDSSETPPHWKEEM----QRLRAY-RPPSGEKWSKGDKL 389
Query: 59 RDYRNNRGMRRPYGYRGRG---RGYYQGGGGRYHRG----------------GYRPVWNR 99
D ++R R R R GYY H G G + R
Sbjct: 390 SDPCSSRWDERSLSQRSRSWSYNGYYSDLSTARHSGHHKKRRKEKKVKHKKKGKKQKHCR 449
Query: 100 RHSR-----------------SPRRGRS---RSRSPKRRSVSSQRSRSR----------- 128
RH + S RR +S R RS + S+SS S R
Sbjct: 450 RHKQTKKRRILIPSDIESSKSSTRRMKSSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQS 509
Query: 129 -----SRRSYRS---SRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLK 180
SR SYRS S+S SSRS + S S+ R +K + +SP K
Sbjct: 510 SLTHSSRDSYRSKSHSQSYSRGSSRSRTASKSSSHSRSRSKSRSSSKSGHRKRASKSPRK 569
Query: 181 SKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPSPIATPPSQSS 240
+ SQ + +P + N++ + +N P P S SP PPS+
Sbjct: 570 TASQLSENKPVKTEPLRATMAQNENVVVQPVV------AENIPVIPLSDSP---PPSRWK 620
Query: 241 SCSD--APMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNGSSRYSPSQNSPIHHIPSR 298
P + K + H IQ + + G+ SS + +NS S
Sbjct: 621 PGQKPWKPSYERIQEMK-AKTTHLLPIQSTYSLANIKETGSSSSYHKREKNSESDQ--ST 677
Query: 299 RSPAKTIAPQNAPRDESR-GRSSFYPDGGDQETAKTGKFLKSPPLHKNLDAREKSTFREE 357
S + +++PR SR RS Y + + +S +R K + +
Sbjct: 678 YSKYSDRSSESSPRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQ 737
Query: 358 ---SPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHS------VKK 408
S + + D R + +L+ + S++ S + ++ L S V V+K
Sbjct: 738 CSRSSSYTSISSDDGRRAKRRLRSSGKKNSVSHKKHSSSSEKTLHSKYVKGRDRSSCVRK 797
Query: 409 EQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEE 468
E RS D+ S + +S +Q S ++ K M + E+
Sbjct: 798 YSESRSSLDY------SSDSEQSSVQATQS-----AQEKEKQGQMERTHNKQEKNRGEEK 846
Query: 469 HSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRR 528
+ ++ P H + L H R + + K D + + ++ +
Sbjct: 847 SKSERECP--HSKKRTLKENLSDHLRNGSKPKRKNYAGSKWDSESNSERDVTKNSKNDSH 904
Query: 529 KERSKERGDSKGSRESSGSR---KQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASP 585
KE G++ ES S K + T K D+ K + + +S S S
Sbjct: 905 PSSDKEEGEATSDSESEVSEIHIKVKPTTKSSTNTSLPDDNGAWKSSKQRTSTSDSEGSC 964
Query: 586 SSPSSREEKESKKER--EEEFKTHHEMK 611
S+ + K K + +E K H K
Sbjct: 965 SNSENNRGKPQKHKHGSKENLKREHTKK 992
Score = 61.6 bits (148), Expect = 3e-09
Identities = 57/144 (39%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYR 62
RS S SHS RS+SRS +SS RSRS+SR + SR RT SRS S R Y+
Sbjct: 1330 RSVSYSHS-RSRSRSSTSSY-RSRSYSRSRSRGWYSRGRTRSRSSS-----YRSYKSHRT 1382
Query: 63 NNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSS 122
++R R Y R Y R R R RS R RS + + RS S
Sbjct: 1383 SSRSRSRSSSYDPHSRSRSYTYDSYYSRSRSR----SRSQRSDSYHRGRSYNRRSRSCRS 1438
Query: 123 QRSRSRSRRSYRSSRSPRSSSSRS 146
S S S RSY RSP SS S
Sbjct: 1439 YGSDSESDRSYSHHRSPSESSRYS 1462
Score = 42.0 bits (97), Expect = 0.002
Identities = 119/572 (20%), Positives = 201/572 (35%), Gaps = 79/572 (13%)
Query: 111 RSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGSQEKQTKKAE 170
+ R S S S + S S SS S + + P KR + K+ +E
Sbjct: 187 KKRKKPTHSEGSDSSSNSSSSSESSSESELEHERSRRRKHKRRPKVKRSKKRRKEASSSE 246
Query: 171 GEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDNSPRSPHSPS 230
EP+ + + K E DT E +S + K +I P +
Sbjct: 247 -EPRNKHAMNPKGHSERSDTNEKRSVDSSAKREKPVVRPEEIPP----VPENRFLLRRDM 301
Query: 231 PIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQ-------HSPERSGSGSVG--NGS 281
P+ T + AP++S K + S+ I+ H+P RS S S + S
Sbjct: 302 PVVTAEPEPKIPDVAPIVS---DQKPSVSKSGRKIKGRGTIRYHTPPRSRSCSESDDDDS 358
Query: 282 SRYSPSQNSPIHHIPSRRSPA--------KTIAPQNAPRDE----SRGRS----SFYPD- 324
S P + + + R P+ K P ++ DE R RS +Y D
Sbjct: 359 SETPPHWKEEMQRLRAYRPPSGEKWSKGDKLSDPCSSRWDERSLSQRSRSWSYNGYYSDL 418
Query: 325 -----GGDQETAKTGKFLKSPPLHKNLDAREKSTFR-EESPLRIKMIASD--SHRPEVKL 376
G + + K +K HK ++K R +++ R +I SD S + +
Sbjct: 419 STARHSGHHKKRRKEKKVK----HKKKGKKQKHCRRHKQTKKRRILIPSDIESSKSSTRR 474
Query: 377 KMAPVPLDDSNRPASLT-----------KDRLLASTLVHSVK-------KEQEFRSIFDH 418
+ + S+R +SL+ D+ + S+L HS + Q +
Sbjct: 475 MKSSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQSSLTHSSRDSYRSKSHSQSYSRGSSR 534
Query: 419 IKLPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATE-------EHST 471
+ S S S S + S +++ KS T ++ + TE ++
Sbjct: 535 SRTASKSSSHSRSRSKSRSSSKSGHRKRASKSPRKTASQLSENKPVKTEPLRATMAQNEN 594
Query: 472 RQKSPEIHRRIDISP-STLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKE 530
P + I + P S +R ++ +K ++ ++++ + L
Sbjct: 595 VVVQPVVAENIPVIPLSDSPPPSRWKPGQKPWKPSYER-IQEMKAKTTHLLPIQSTYSLA 653
Query: 531 RSKERGDSKGSRESSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSS-SSSASPSSPS 589
KE G S SS ++++ + D Y Y D S + SRSS S S S S
Sbjct: 654 NIKETGSS-----SSYHKREKNSESDQSTYSKYSDRSSESSPRSRSRSSRSRSYSRSYTR 708
Query: 590 SREEKESKKEREEEFKTHHEMKEYSGFAGVSR 621
SR S H +YS + SR
Sbjct: 709 SRSLASSHSRSRSPSSRSHSRNKYSDHSQCSR 740
Score = 41.2 bits (95), Expect = 0.004
Identities = 88/386 (22%), Positives = 148/386 (38%), Gaps = 69/386 (17%)
Query: 273 GSGSVGNGSSRYSPSQNSPIHHIPSRRSP---------AKTIAPQNAPRDESRGRSSFYP 323
GS S N SS S S + H SRR +K + + +E R + + P
Sbjct: 197 GSDSSSNSSSSSESSSESELEHERSRRRKHKRRPKVKRSKKRRKEASSSEEPRNKHAMNP 256
Query: 324 DGGDQETAKTGKFLKSPPLHKNLDA---REKSTFREES----PLRIKMIASD----SHRP 372
G + + K +++D+ REK R E P ++ D + P
Sbjct: 257 KGHSERSDTNEK--------RSVDSSAKREKPVVRPEEIPPVPENRFLLRRDMPVVTAEP 308
Query: 373 EVKLK-MAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSES 431
E K+ +AP+ S++ S++K S +K + +I H P S+S SES
Sbjct: 309 EPKIPDVAPIV---SDQKPSVSK----------SGRKIKGRGTIRYHT--PPRSRSCSES 353
Query: 432 FIQHIVSLVHHVKE--QYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRI------- 482
H KE Q ++ E+++ K ++ S+R + +R
Sbjct: 354 DDDDSSETPPHWKEEMQRLRAYRPPSGEKWSKGDKLSDPCSSRWDERSLSQRSRSWSYNG 413
Query: 483 ---DISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSK 539
D+S + H + +E+ K + +KG K+ C RR K+ K R
Sbjct: 414 YYSDLSTARHSGHHKKRRKEKKVKHK-KKGKKQKHC----------RRHKQTKKRRILIP 462
Query: 540 GSRESSGS--RKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESK 597
ESS S R+ + + + +S S H ++D S+S S + SSR+ SK
Sbjct: 463 SDIESSKSSTRRMKSSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQSSLTHSSRDSYRSK 522
Query: 598 KEREEEFKTHHEMKEYSGFAGVSRPR 623
+ + + S + SR R
Sbjct: 523 SHSQSYSRGSSRSRTASKSSSHSRSR 548
Score = 39.3 bits (90), Expect = 0.013
Identities = 124/680 (18%), Positives = 232/680 (34%), Gaps = 119/680 (17%)
Query: 7 RSHSSRSKSRSQSSSRS-RSRSHSRKKRYSSRSRSRTYSRSRSRDRMY--------SRDY 57
R+H+ + K+R + S+S R HS+K+ + S+ + + Y S
Sbjct: 833 RTHNKQEKNRGEEKSKSERECPHSKKRTLKENLSDHLRNGSKPKRKNYAGSKWDSESNSE 892
Query: 58 RRDYRNNRGMRRPYGYRGRGRGYYQGGG--GRYHRGGYRPVWNRRHSRSPRRGRSRSRSP 115
R +N++ P + G H + ++ P + S
Sbjct: 893 RDVTKNSKNDSHPSSDKEEGEATSDSESEVSEIHIKVKPTTKSSTNTSLPDDNGAWKSSK 952
Query: 116 KRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSS--SPYSKSPVSKRRGSQEKQTKKAE--- 170
+R S S + + R S+ + ++K K +G ++K+ K +
Sbjct: 953 QRTSTSDSEGSCSNSENNRGKPQKHKHGSKENLKREHTKKVKEKLKGKKDKKHKAPKRKQ 1012
Query: 171 ----------GEPQEESPLKSKSQEEPKDTFEHDPSESI-DEFNKSSATSGDIWPGLSAY 219
GE +EE + +E K+ + +E+I D K+ +S + G
Sbjct: 1013 AFHWQPPLEFGEEEEEEIDDKQVTQESKEKKVSENNETIKDNILKTEKSSEEDLSG---- 1068
Query: 220 DNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHS--HSIQHSPERSGSGSV 277
H +++ Q + D LS +A NT + +IQH E SV
Sbjct: 1069 ------KHDTVTVSSDLDQFTK--DDSKLSISPTALNTEENVACLQNIQHVEE-----SV 1115
Query: 278 GNGSSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFL 337
NG + ++ P R SPAK +ET+ G
Sbjct: 1116 PNGVEDVLQTDDNMEICTPDRSSPAKV-----------------------EETSPLGNAR 1152
Query: 338 KSPPLHKNLDAREKSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPA------S 391
P +++ K E P + +++ +S E K+ + V DS+ + S
Sbjct: 1153 LDTP---DINIVLKQDMATEHP-QAEVVKQESSMSESKV-LGEVGKQDSSSASLASAGES 1207
Query: 392 LTKDRLLASTLVHSVKKEQEFRSIFDHIKLPQASKSTSESFIQHIVSLVHHVKEQYFKSA 451
K + + ++ + K+ + ++ P A+ TS + +++ V +K Q +
Sbjct: 1208 TGKKEVAEKSQINLIDKKWKPLQGVGNLAAPNAA--TSSAVEVKVLTTVPEMKPQGLRIE 1265
Query: 452 AMTLNE-----------------RFTSYQKATEEHSTRQKSPEIHRRIDISPSTLRKHTR 494
+ N+ R Q+++ + T + + R SPS R +
Sbjct: 1266 IKSKNKVRPGSLFDEVRKTARLNRRPRNQESSSDEQTPSRDDDSQSR---SPSRSRSKSE 1322
Query: 495 LAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKER-------SKERGDS----KGSRE 543
R + R ++ R R + R ++ R S K R
Sbjct: 1323 TKSRHRTRSVSYSHSRSRSRSSTSSYRSRSYSRSRSRGWYSRGRTRSRSSSYRSYKSHRT 1382
Query: 544 SSGSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKE------SK 597
SS SR + + + +SY DS + R + SRS S + S S
Sbjct: 1383 SSRSRSRSSSYDPHSRSRSYTYDSYYSRSRSRSRSQRSDSYHRGRSYNRRSRSCRSYGSD 1442
Query: 598 KEREEEFKTHHEMKEYSGFA 617
E + + H E S ++
Sbjct: 1443 SESDRSYSHHRSPSESSRYS 1462
>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 70.9 bits (172), Expect = 4e-12
Identities = 69/222 (31%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 3 RSNSRSHSSRSKSR-SQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDY 61
RS SRS R + R SQS SRSRSRSH R R+R R R R R SR+ R D
Sbjct: 6 RSRSRSAGRRGRRRQSQSGSRSRSRSHGR------RNRRRREDEGRRRRRRRSRERRSDS 59
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
R R G R RP W HSR G S+S S + +S
Sbjct: 60 EEERWQR----------------SGMRSRSPPRPKW---HSRD---GSSQSDSGEEQSRG 97
Query: 122 SQRSRSRSRRSYRSSRSPRSSSS--RSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPL 179
R R RS+ S S SS+S RS SP + + ++ S +++ + E Q+E +
Sbjct: 98 QWARRRRRARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELM 157
Query: 180 KSKSQEEPKDTFEHDPSESIDEFNKSSATSGDIWPGLSAYDN 221
K+ E K E+ + + G+ + G + DN
Sbjct: 158 KAFETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDN 199
Score = 34.7 bits (78), Expect = 0.33
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 24/132 (18%)
Query: 62 RNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVS 121
R+ R R G RGR R G R +R H R RR R +RR
Sbjct: 3 RDTRSRSRSAGRRGRRRQSQSGSRSR----------SRSHGRRNRRRREDEGRRRRR--- 49
Query: 122 SQRSRSRS--------RRSYRSSRSPRSSS--SRSSSPYSKSPVSKRRGSQEKQTKKAEG 171
+RSR R +RS SRSP SR S S S + RG ++ ++A
Sbjct: 50 -RRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARS 108
Query: 172 EPQEESPLKSKS 183
S S S
Sbjct: 109 WSPSSSASSSAS 120
Score = 31.2 bits (69), Expect = 3.7
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 36/122 (29%)
Query: 526 RRRKERSKER-GDSKGSR-ESSGSRKQEKT-PKDYKEYKSYKDDS-------------KH 569
RRR+ RS+ER DS+ R + SG R + PK + S + DS +
Sbjct: 46 RRRRRRSRERRSDSEEERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRR 105
Query: 570 KREQDHSRSSSSSASPSSPSS--------------------REEKESKKEREEEFKTHHE 609
R S S+SSSASP S REE++ ++E + F+T E
Sbjct: 106 ARSWSPSSSASSSASPGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEE 165
Query: 610 MK 611
+
Sbjct: 166 KR 167
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.124 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,326,211
Number of Sequences: 37866
Number of extensions: 1828768
Number of successful extensions: 34103
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 1010
Number of HSP's that attempted gapping in prelim test: 13674
Number of HSP's gapped (non-prelim): 10423
length of query: 747
length of database: 18,247,518
effective HSP length: 110
effective length of query: 637
effective length of database: 14,082,258
effective search space: 8970398346
effective search space used: 8970398346
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.