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Search of human proteins with 239749275
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
sapiens]
(245 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo ... 503 e-143
gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens] 179 3e-45
gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens] 144 9e-35
gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens] 141 5e-34
gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens] 133 1e-31
gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo ... 133 2e-31
gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens] 125 3e-29
gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens] 124 7e-29
gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens] 96 2e-20
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens] 92 4e-19
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ... 92 4e-19
gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens] 80 2e-15
gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] 79 4e-15
gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] 70 2e-12
gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens] 56 3e-08
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 51 8e-07
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 51 8e-07
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 50 2e-06
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 3e-06
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 3e-06
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 3e-06
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 49 4e-06
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 48 7e-06
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 48 9e-06
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 48 9e-06
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 47 1e-05
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 47 2e-05
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 46 3e-05
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 46 3e-05
gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens] 45 6e-05
>gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
sapiens]
Length = 245
Score = 503 bits (1296), Expect = e-143
Identities = 245/245 (100%), Positives = 245/245 (100%)
Query: 1 MAEGTLTWRKDNELIPWCLVLGALLAHPTERVQQTEERLWDEKVNSEMQREASKTGRPSS 60
MAEGTLTWRKDNELIPWCLVLGALLAHPTERVQQTEERLWDEKVNSEMQREASKTGRPSS
Sbjct: 1 MAEGTLTWRKDNELIPWCLVLGALLAHPTERVQQTEERLWDEKVNSEMQREASKTGRPSS 60
Query: 61 SAPAHSDPDLVKLPSCPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVEL 120
SAPAHSDPDLVKLPSCPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVEL
Sbjct: 61 SAPAHSDPDLVKLPSCPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVEL 120
Query: 121 RCDPISGHTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQR 180
RCDPISGHTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQR
Sbjct: 121 RCDPISGHTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQR 180
Query: 181 TQQEDSAVYLCASSLATAWHSRLLPAHKPHPSLSLQLLDTLNRGFSLLLPPHGKQVDLDL 240
TQQEDSAVYLCASSLATAWHSRLLPAHKPHPSLSLQLLDTLNRGFSLLLPPHGKQVDLDL
Sbjct: 181 TQQEDSAVYLCASSLATAWHSRLLPAHKPHPSLSLQLLDTLNRGFSLLLPPHGKQVDLDL 240
Query: 241 SLSFG 245
SLSFG
Sbjct: 241 SLSFG 245
>gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens]
Length = 147
Score = 179 bits (453), Expect = 3e-45
Identities = 92/140 (65%), Positives = 101/140 (72%)
Query: 58 PSSSAPAHSDPDLVKLPSCPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKD 117
P+SSAPAHSDPDL KLPSCPDPAMGTRLL WVAFCLL + AGV QSP K+ EK +
Sbjct: 7 PTSSAPAHSDPDLAKLPSCPDPAMGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQP 66
Query: 118 VELRCDPISGHTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLT 177
V C+PISGH LYWY Q+LGQG E LI ++ A D S LP DRFSAER G STL
Sbjct: 67 VAFWCNPISGHNTLYWYLQNLGQGPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLK 126
Query: 178 IQRTQQEDSAVYLCASSLAT 197
IQ + DSAVYLCASSL T
Sbjct: 127 IQPAELGDSAVYLCASSLDT 146
>gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
Length = 189
Score = 144 bits (362), Expect = 9e-35
Identities = 73/134 (54%), Positives = 89/134 (66%)
Query: 76 CPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYR 135
C AM + L V+ C+L A HT AGV QSP ++VTE G++V LRC PISGH L+WYR
Sbjct: 33 CSHSAMDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYR 92
Query: 136 QSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSL 195
Q++ +GLE LIYF N D SG+P DRFSA+ S STL IQ ++ DSAVY CASSL
Sbjct: 93 QTMMRGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSL 152
Query: 196 ATAWHSRLLPAHKP 209
ATA + P KP
Sbjct: 153 ATALQNHPFPVQKP 166
>gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
Length = 170
Score = 141 bits (356), Expect = 5e-34
Identities = 74/156 (47%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Query: 81 MGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQ 140
M TRLL V CLLG + A V+Q+P +KVTE G++V +RC PI GH ++WYRQ++ Q
Sbjct: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
Query: 141 GLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAWH 200
GLE L YF+ + D SG+P DRFSAE +++TL IQ ++ DSAVY CAS L TA
Sbjct: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
Query: 201 SRLLPAHKPHPSLSLQLLDTLNRGFSLLLPPHGKQV 236
+ LLP KP L L+ F L PP ++V
Sbjct: 121 NHLLPVQKPWCFLFSSSTQQLSAAF--LAPPLAQEV 154
>gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]
Length = 179
Score = 133 bits (335), Expect = 1e-31
Identities = 71/146 (48%), Positives = 92/146 (63%), Gaps = 2/146 (1%)
Query: 89 VAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQGLEFLIYF 148
+ F L +H AGV+Q PS+ V EKG+ V LRCDPISGH LYWYR+ +G+ ++FL++F
Sbjct: 4 ILFLSLPTEHIEAGVTQFPSHSVIEKGQTVTLRCDPISGHDNLYWYRRVMGKEIKFLLHF 63
Query: 149 QGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAWHSRLLPAHK 208
S D+SG+P++RF AERTGG+ STL +Q + EDS VY CASS T HSR L
Sbjct: 64 VKESKQDESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYFCASSQDTVLHSRALAVQ- 122
Query: 209 PHPSLSLQLLDTLNRGFSLLLPPHGK 234
+ SL L SL L P G+
Sbjct: 123 -NHSLLLSTHSCPKGRLSLCLLPQGR 147
>gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo
sapiens]
Length = 118
Score = 133 bits (334), Expect = 2e-31
Identities = 71/117 (60%), Positives = 79/117 (67%)
Query: 81 MGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQ 140
MGTRLL WVAFCLL + AGV QSP K+ EK + V C+PISGH LYWY Q+LGQ
Sbjct: 1 MGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQ 60
Query: 141 GLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLAT 197
G E LI ++ A D S LP DRFSAER G STL IQ + DSAVYLCASSL T
Sbjct: 61 GPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSLDT 117
>gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
Length = 182
Score = 125 bits (314), Expect = 3e-29
Identities = 63/140 (45%), Positives = 85/140 (60%)
Query: 74 PSCPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYW 133
PS + AM TR+L CLLGA + AGV Q+P + V +G++ LRC P+ GH+ +YW
Sbjct: 27 PSMANSAMDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYW 86
Query: 134 YRQSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCAS 193
YRQ +GL+F++Y Q + D+SG+P +RFSAE S L IQ+ + DSA Y CAS
Sbjct: 87 YRQLPEEGLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCAS 146
Query: 194 SLATAWHSRLLPAHKPHPSL 213
S T S +L HK P L
Sbjct: 147 SPPTLMQSHILSVHKHPPDL 166
>gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
Length = 135
Score = 124 bits (311), Expect = 7e-29
Identities = 64/125 (51%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Query: 85 LLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQGLEF 144
LL WV CLL A H+ GVSQ+P +KVT G++V LRCDP SGH ++WYRQ+L Q ++
Sbjct: 5 LLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKL 64
Query: 145 LIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAWHSRLL 204
LI FQ + SG+P +RF+AER G+ STL I + DSAVYL +S TAW S+
Sbjct: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSG-GTAWLSQFP 123
Query: 205 PAHKP 209
P KP
Sbjct: 124 PGCKP 128
>gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
Length = 122
Score = 96.3 bits (238), Expect = 2e-20
Identities = 48/106 (45%), Positives = 68/106 (64%)
Query: 92 CLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQGLEFLIYFQGN 151
CLL A G V+Q+P + V +G+ +L C PI GH+ ++WY+Q L +FLI FQ
Sbjct: 12 CLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLISFQNE 71
Query: 152 SAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLAT 197
+ D++G+P +RFSA+ S +L IQ T+ EDSAVY CASS +T
Sbjct: 72 NVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQST 117
>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
Length = 167
Score = 92.0 bits (227), Expect = 4e-19
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 81 MGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQ 140
MG LL W+A CLLG H A V Q+P +VT+ GK V L C H +YWY+Q Q
Sbjct: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
Query: 141 GLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAWH 200
+ L ++ +++ P D F + R S L I+ D+A+YLCA+S T
Sbjct: 61 APKLLFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQ 119
Query: 201 SRLLPAHKPH 210
LL HKPH
Sbjct: 120 CFLLSVHKPH 129
>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
sapiens]
Length = 167
Score = 92.0 bits (227), Expect = 4e-19
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 81 MGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQ 140
MG LL W+A CLLG H A V Q+P +VT+ GK V L C H +YWY+Q Q
Sbjct: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
Query: 141 GLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAWH 200
+ L ++ +++ P D F + R S L I+ D+A+YLCA+S T
Sbjct: 61 APKLLFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQ 119
Query: 201 SRLLPAHKPH 210
LL HKPH
Sbjct: 120 CFLLSVHKPH 129
>gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
Length = 132
Score = 79.7 bits (195), Expect = 2e-15
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 81 MGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQ 140
M + L F AF LLG A V+Q+P N++T+ GK + L C GH +YWYRQ G
Sbjct: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
Query: 141 GLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASS--LATA 198
GL+ LIY+ + G SD +S R + +L+++ +A+Y CA+S + +
Sbjct: 61 GLQ-LIYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSDLHSAS 119
Query: 199 WHSRLLPAHKPH 210
W L + H
Sbjct: 120 WPPALYTERQTH 131
>gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]
Length = 235
Score = 79.0 bits (193), Expect = 4e-15
Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 79 PAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSL 138
PAM LL AF LL A AGV+Q+P +V + G+ + L C H +YWYRQ
Sbjct: 13 PAMSLGLLCCGAFSLLWAGPVNAGVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDP 72
Query: 139 GQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATA 198
G GL + Y G K +P D ++ R L ++ ++VY CASS +T
Sbjct: 73 GMGLRLIHYSVGEGTTAKGEVP-DGYNVSRLKKQNFLLGLESAAPSQTSVYFCASSYSTV 131
Query: 199 WHSRLLPAHK 208
H LL A K
Sbjct: 132 LHGCLLSAQK 141
>gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]
Length = 132
Score = 69.7 bits (169), Expect = 2e-12
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 81 MGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQ 140
M RLL ++ F LGA A + Q+P V GK + L C GH +YWY+Q G
Sbjct: 1 MTIRLLCYMGFYFLGAGLMEADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGM 60
Query: 141 GLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAWH 200
L + Y G ++ +K L S+ + R LT++ + ++ YLCASS T H
Sbjct: 61 ELHLIHYSYGVNSTEKGDLSSES-TVSRIRTEHFPLTLESARPSHTSQYLCASSEYTVLH 119
Query: 201 SRLLPAHKPHP 211
A K P
Sbjct: 120 GYRHSAQKGSP 130
>gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]
Length = 170
Score = 55.8 bits (133), Expect = 3e-08
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 100 GAGVSQSPSNKVTEKGKDVELRCDPISGH-TALYWYRQSLGQGLEFLIYF-QGNSAPDKS 157
GA VSQ PS + + G V++ C + T ++WYRQ Q L + +G+ A +
Sbjct: 34 GAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQ 93
Query: 158 GLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCAS 193
G+ D+F ++STLT+ EDS+ Y+C++
Sbjct: 94 GVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSA 129
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 51.2 bits (121), Expect = 8e-07
Identities = 49/143 (34%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 103 VSQSPSNKVTEKGKDVELRCDPISG-HTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPS 161
V+QSPS+ G V + C G L WY+Q GQ LIY + +SG+PS
Sbjct: 26 VTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTLLIYAASSL---QSGVPS 82
Query: 162 DRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAW-----------HSRLLPAHKP- 209
RFS +G TLTI Q ED A Y C T + SR + H P
Sbjct: 83 -RFSGSGSGTDF-TLTISSLQPEDVATYYCLQDYTTPFTVLQAITKTPQRSRCVSLHCPS 140
Query: 210 HPSLSLQLLDTLNRGFSLLLPPH 232
+ S L LL T + L PH
Sbjct: 141 YSSWCLHLLRTFPK-----LHPH 158
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 51.2 bits (121), Expect = 8e-07
Identities = 49/143 (34%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 103 VSQSPSNKVTEKGKDVELRCDPISG-HTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPS 161
V+QSPS+ G V + C G L WY+Q GQ LIY + +SG+PS
Sbjct: 26 VTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTLLIYAASSL---QSGVPS 82
Query: 162 DRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAW-----------HSRLLPAHKP- 209
RFS +G TLTI Q ED A Y C T + SR + H P
Sbjct: 83 -RFSGSGSGTDF-TLTISSLQPEDVATYYCLQDYTTPFTVLQAITKTPQRSRCVSLHCPS 140
Query: 210 HPSLSLQLLDTLNRGFSLLLPPH 232
+ S L LL T + L PH
Sbjct: 141 YSSWCLHLLRTFPK-----LHPH 158
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 50.1 bits (118), Expect = 2e-06
Identities = 37/96 (38%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 103 VSQSPSNKVTEKGKDVELRCDPISG-HTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPS 161
V+QSPS+ G V + C G L WY+Q GQ LIY + +SG+PS
Sbjct: 26 VTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTLLIYAASSL---QSGVPS 82
Query: 162 DRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLAT 197
RFS +G TLTI Q ED A Y C T
Sbjct: 83 -RFSGSGSGTDF-TLTISSLQPEDVATYYCLQDYTT 116
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 49.3 bits (116), Expect = 3e-06
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 58 PSSSAPAHSDPDLVKLPSCPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKD 117
P +S P V+ P T+LL + L GA ++QSPS+ G
Sbjct: 161 PPTSQPQSGHSTEVRAP--------TQLLGLLVLWLPGA-RCDIQMTQSPSSLSASVGDR 211
Query: 118 VELRCDPISG-HTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTL 176
V + C G L WY+Q G+ + LIY + +SG+PS RFS + G+ TL
Sbjct: 212 VTITCRASQGISNNLNWYQQKPGKTPKLLIYAASSL---QSGIPS-RFS-DSGSGTDYTL 266
Query: 177 TIQRTQQEDSAVYLCASSLATA 198
TI Q ED A Y C S +T+
Sbjct: 267 TISSLQPEDFATYYCQQSDSTS 288
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 49.3 bits (116), Expect = 3e-06
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 58 PSSSAPAHSDPDLVKLPSCPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKD 117
P +S P V+ P T+LL + L GA ++QSPS+ G
Sbjct: 107 PPTSQPQSGHSTEVRAP--------TQLLGLLVLWLPGA-RCDIQMTQSPSSLSASVGDR 157
Query: 118 VELRCDPISG-HTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTL 176
V + C G L WY+Q G+ + LIY + +SG+PS RFS + G+ TL
Sbjct: 158 VTITCRASQGISNNLNWYQQKPGKTPKLLIYAASSL---QSGIPS-RFS-DSGSGTDYTL 212
Query: 177 TIQRTQQEDSAVYLCASSLATA 198
TI Q ED A Y C S +T+
Sbjct: 213 TISSLQPEDFATYYCQQSDSTS 234
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 49.3 bits (116), Expect = 3e-06
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 58 PSSSAPAHSDPDLVKLPSCPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKD 117
P +S P V+ P T+LL + L GA ++QSPS+ G
Sbjct: 107 PPTSQPQSGHSTEVRAP--------TQLLGLLVLWLPGA-RCDIQMTQSPSSLSASVGDR 157
Query: 118 VELRCDPISG-HTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTL 176
V + C G L WY+Q G+ + LIY + +SG+PS RFS + G+ TL
Sbjct: 158 VTITCRASQGISNNLNWYQQKPGKTPKLLIYAASSL---QSGIPS-RFS-DSGSGTDYTL 212
Query: 177 TIQRTQQEDSAVYLCASSLATA 198
TI Q ED A Y C S +T+
Sbjct: 213 TISSLQPEDFATYYCQQSDSTS 234
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 48.9 bits (115), Expect = 4e-06
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 83 TRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISG-HTALYWYRQSLGQG 141
T+LL + L GA ++QSPS+ G V + C G L WY+Q G+
Sbjct: 518 TQLLGLLVLWLPGA-RCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKT 576
Query: 142 LEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLAT 197
+ LIY + +SG+PS RFS +G TLTI+ Q ED A Y C S +T
Sbjct: 577 PKLLIYAASSL---QSGIPS-RFSDSGSGADY-TLTIRSLQPEDFATYYCQQSDST 627
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 48.1 bits (113), Expect = 7e-06
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 83 TRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISG-HTALYWYRQSLGQG 141
T+LL + L GA ++QSPS+ G V + C G L WY+Q G+
Sbjct: 177 TQLLGLLGLWLPGA-RCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPGKT 235
Query: 142 LEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLAT 197
+ LIY + +SG+PS RFS +G TLTI Q ED A Y C S +T
Sbjct: 236 PKLLIYAASSL---QSGIPS-RFSDSGSGADY-TLTISSLQPEDFAAYYCQQSDST 286
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 47.8 bits (112), Expect = 9e-06
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 85 LLFWVAFCLLGADHTGAGV-SQSPSNKVTEKGKDVELRCDPISGHTALY--WYRQSLGQG 141
LL W+ D TG V +QSP+ G+ L C ++ Y WY+Q G
Sbjct: 11 LLLWLP------DTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLA 64
Query: 142 LEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLC 191
LIY + A +G+P DRFS +G TLTI R + ED AVY C
Sbjct: 65 PRLLIYDASSRA---TGIP-DRFSGSGSGTDF-TLTISRLEPEDFAVYYC 109
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 47.8 bits (112), Expect = 9e-06
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 85 LLFWVAFCLLGADHTGAGV-SQSPSNKVTEKGKDVELRCDPISGHTALY--WYRQSLGQG 141
LL W+ D TG V +QSP+ G+ L C ++ Y WY+Q G
Sbjct: 11 LLLWLP------DTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLA 64
Query: 142 LEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLC 191
LIY + A +G+P DRFS +G TLTI R + ED AVY C
Sbjct: 65 PRLLIYDASSRA---TGIP-DRFSGSGSGTDF-TLTISRLEPEDFAVYYC 109
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 47.4 bits (111), Expect = 1e-05
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 103 VSQSPSNKVTEKGKDVELRCDPISG-HTALYWYRQSLGQGLEFLIYFQGNSAPDKSGLPS 161
++QSPS+ G V + C G +L WY+Q G+ + L+Y +SG+PS
Sbjct: 35 MTQSPSSLSASVGDRVTITCRASQGISNSLAWYQQKPGKAPKLLLYAASRL---ESGVPS 91
Query: 162 DRFSAERTGGSVSTLTIQRTQQEDSAVYLCA---SSLATAWHSR 202
RFS +G TLTI Q ED A Y C S+ T H+R
Sbjct: 92 -RFSGSGSGTDY-TLTISSLQPEDFATYYCQQYYSTPPTVLHTR 133
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 46.6 bits (109), Expect = 2e-05
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 85 LLFWVAFCLLGADHTGAGV-SQSPSNKVTEKGKDVELRCDPISGHTALY--WYRQSLGQG 141
LL W+ D TG V +QSP+ G+ L C ++ Y WY+Q GQ
Sbjct: 11 LLLWLP------DTTGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQA 64
Query: 142 LEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLC 191
LIY A +G+P+ RFS +G TLTI Q ED AVY C
Sbjct: 65 PRLLIYGASTRA---TGIPA-RFSGSGSGTDF-TLTISSLQPEDFAVYYC 109
>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
sapiens]
Length = 264
Score = 46.2 bits (108), Expect = 3e-05
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 103 VSQSPSNKVTEKGKDVELRCDPIS---GHTALYWYRQSLGQGLEFLIYFQGNSAPDKSGL 159
++Q PS T G+ V + C S G + WY+Q G + LIY N P SG+
Sbjct: 49 LTQPPSASGTP-GQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIY-SNNQRP--SGV 104
Query: 160 PSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCAS 193
P DRFS ++G S S L I Q ED A Y CA+
Sbjct: 105 P-DRFSGSKSGTSAS-LAISGLQSEDEADYYCAA 136
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 45.8 bits (107), Expect = 3e-05
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 84 RLLFWVAFCLLGAD----HTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALY--WYRQS 137
+LLF + L G H ++QSP+ G+ L C ++ Y WY+Q
Sbjct: 6 QLLFLLLLWLPGEGNMRYHGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQK 65
Query: 138 LGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLC 191
GQ LIY A +G+P+ RFS +G TLTI Q ED AVY C
Sbjct: 66 PGQAPRLLIYGASTRA---TGIPA-RFSGSGSGTDF-TLTISSLQPEDFAVYYC 114
>gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 45.1 bits (105), Expect = 6e-05
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 88 WVAFCLLGADHTGAGVSQ----SPSNKVTEKGKDVELRCDPISGHTA----LYWYRQSLG 139
W LL H +SQ P++ G C SG +YWY+Q G
Sbjct: 3 WTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPG 62
Query: 140 QGLEFLIYFQGNSAPDK-SGLPSDRFSAERTGGS-VSTLTIQRTQQEDSAVYLCASSLAT 197
+L+ ++ +S + SG+PS RFS + + L I Q ED A Y CA ++
Sbjct: 63 SLPRYLLRYKSDSDKQQGSGVPS-RFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYSS 121
Query: 198 AWHS 201
HS
Sbjct: 122 TSHS 125
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,408,891
Number of Sequences: 37866
Number of extensions: 492743
Number of successful extensions: 1824
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 1738
Number of HSP's gapped (non-prelim): 144
length of query: 245
length of database: 18,247,518
effective HSP length: 100
effective length of query: 145
effective length of database: 14,460,918
effective search space: 2096833110
effective search space used: 2096833110
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.