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Search of human proteins with 239747941
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747941 PREDICTED: hypothetical protein XP_002346482 [Homo
sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753374 PREDICTED: hypothetical protein [Homo sapiens] 312 8e-86
gi|239747941 PREDICTED: hypothetical protein XP_002346482 [Homo ... 312 8e-86
gi|239741836 PREDICTED: hypothetical protein XP_002342322 [Homo ... 312 8e-86
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 35 0.033
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 35 0.033
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 33 0.074
gi|134304838 eukaryotic translation initiation factor 2-alpha ki... 33 0.074
gi|47078300 apoptosis related protein 3 isoform b [Homo sapiens] 33 0.13
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 32 0.16
gi|4507483 thrombomodulin precursor [Homo sapiens] 32 0.22
gi|21618325 forkhead box E1 [Homo sapiens] 32 0.22
gi|24497554 homeobox A13 [Homo sapiens] 31 0.37
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 31 0.37
gi|154146199 sal-like 3 [Homo sapiens] 31 0.37
gi|239757152 PREDICTED: hypothetical protein [Homo sapiens] 31 0.48
gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo ... 31 0.48
gi|31543543 retinoic acid induced 17 [Homo sapiens] 31 0.48
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 31 0.48
gi|239756833 PREDICTED: hypothetical protein [Homo sapiens] 30 0.63
gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo ... 30 0.63
gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo ... 30 0.63
gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens] 30 0.63
gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens] 30 0.63
gi|67003568 skin-specific protein 32 [Homo sapiens] 30 0.82
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 30 0.82
gi|146219841 PNMA-like 2 [Homo sapiens] 30 0.82
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 1.1
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 1.1
gi|239748384 PREDICTED: hypothetical protein XP_002346651 [Homo ... 30 1.1
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 1.1
>gi|239753374 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 312 bits (799), Expect = 8e-86
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MPLDQSNVEPEERERSHGSHRAAWMDAVEGTRVKKHVVLVADYPFSDPSEETQKRISEIF 60
MPLDQSNVEPEERERSHGSHRAAWMDAVEGTRVKKHVVLVADYPFSDPSEETQKRISEIF
Sbjct: 1 MPLDQSNVEPEERERSHGSHRAAWMDAVEGTRVKKHVVLVADYPFSDPSEETQKRISEIF 60
Query: 61 IAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQ 120
IAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQ
Sbjct: 61 IAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQ 120
Query: 121 AVAVAVAAAAVEVARATARPGAAPELSNSCPRRA 154
AVAVAVAAAAVEVARATARPGAAPELSNSCPRRA
Sbjct: 121 AVAVAVAAAAVEVARATARPGAAPELSNSCPRRA 154
>gi|239747941 PREDICTED: hypothetical protein XP_002346482 [Homo
sapiens]
Length = 154
Score = 312 bits (799), Expect = 8e-86
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MPLDQSNVEPEERERSHGSHRAAWMDAVEGTRVKKHVVLVADYPFSDPSEETQKRISEIF 60
MPLDQSNVEPEERERSHGSHRAAWMDAVEGTRVKKHVVLVADYPFSDPSEETQKRISEIF
Sbjct: 1 MPLDQSNVEPEERERSHGSHRAAWMDAVEGTRVKKHVVLVADYPFSDPSEETQKRISEIF 60
Query: 61 IAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQ 120
IAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQ
Sbjct: 61 IAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQ 120
Query: 121 AVAVAVAAAAVEVARATARPGAAPELSNSCPRRA 154
AVAVAVAAAAVEVARATARPGAAPELSNSCPRRA
Sbjct: 121 AVAVAVAAAAVEVARATARPGAAPELSNSCPRRA 154
>gi|239741836 PREDICTED: hypothetical protein XP_002342322 [Homo
sapiens]
Length = 154
Score = 312 bits (799), Expect = 8e-86
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MPLDQSNVEPEERERSHGSHRAAWMDAVEGTRVKKHVVLVADYPFSDPSEETQKRISEIF 60
MPLDQSNVEPEERERSHGSHRAAWMDAVEGTRVKKHVVLVADYPFSDPSEETQKRISEIF
Sbjct: 1 MPLDQSNVEPEERERSHGSHRAAWMDAVEGTRVKKHVVLVADYPFSDPSEETQKRISEIF 60
Query: 61 IAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQ 120
IAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQ
Sbjct: 61 IAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQ 120
Query: 121 AVAVAVAAAAVEVARATARPGAAPELSNSCPRRA 154
AVAVAVAAAAVEVARATARPGAAPELSNSCPRRA
Sbjct: 121 AVAVAVAAAAVEVARATARPGAAPELSNSCPRRA 154
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 34.7 bits (78), Expect = 0.033
Identities = 24/45 (53%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 102 ARAAPGLRADVLPRSAAAQ---AVAVAVAAAAVEVARATARPGAA 143
A AA L+ D+LP AAAQ A A A AAAA VA A P AA
Sbjct: 75 APAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAA 119
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 34.7 bits (78), Expect = 0.033
Identities = 24/45 (53%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 102 ARAAPGLRADVLPRSAAAQ---AVAVAVAAAAVEVARATARPGAA 143
A AA L+ D+LP AAAQ A A A AAAA VA A P AA
Sbjct: 75 APAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAA 119
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 33.5 bits (75), Expect = 0.074
Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 39 LVADYPFS-DPSEETQKRISEIFIAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGG 97
L A YP + DPS + S + P P G G S C+ S
Sbjct: 161 LAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGP---SAASLCAASQP 217
Query: 98 CCGPARAAPGLRADVLPRSAAAQAVAVAVAAAAVE-VARATARP 140
PA A+P A + AAA A A AAA V+ VA + A P
Sbjct: 218 AAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATP 261
>gi|134304838 eukaryotic translation initiation factor 2-alpha
kinase 3 [Homo sapiens]
Length = 1116
Score = 33.5 bits (75), Expect = 0.074
Identities = 26/53 (49%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 94 RSGGCCGP-ARAAPGLRADVLPRSAAAQAVAVAVAAAAVEVARATARPGAAPE 145
R+ G P A AA GL A P SA A AVAAA V V A A P AA E
Sbjct: 32 RARGLPAPTAEAAFGLGAAAAPTSATRVPAAGAVAAAEVTVEDAEALPAAAGE 84
>gi|47078300 apoptosis related protein 3 isoform b [Homo sapiens]
Length = 284
Score = 32.7 bits (73), Expect = 0.13
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 71 SLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRAD--VLPRSAAAQAVAVAVAA 128
S PR G GR+G + + GG GP RA+ G + + P + V AA
Sbjct: 15 SSPRATGPGRLGH--ARGRGPDALRGGAAGPGRASSGAPRERKMAPHGPGSLTTLVPWAA 72
Query: 129 AAVEVARATARPGAAPELSNSCP 151
A + +A R A PE+ CP
Sbjct: 73 ALL-LALGVERALALPEICTQCP 94
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 32.3 bits (72), Expect = 0.16
Identities = 22/46 (47%), Positives = 22/46 (47%)
Query: 102 ARAAPGLRADVLPRSAAAQAVAVAVAAAAVEVARATARPGAAPELS 147
A AAP L A P AAA A A A AAA A A AAP S
Sbjct: 524 AAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSHS 569
Score = 30.8 bits (68), Expect = 0.48
Identities = 20/60 (33%), Positives = 25/60 (41%)
Query: 90 SCCSRSGGCCGPARAAPGLRADVLPRSAAAQAVAVAVAAAAVEVARATARPGAAPELSNS 149
+ + + A AP L A P AAA A A+A AAA A AAP + S
Sbjct: 504 AAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAAS 563
Score = 29.6 bits (65), Expect = 1.1
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 95 SGGCCGPARAAPGLRADVLPRSAAAQAVAVAVAAAAVEVARATARPGAA 143
SG P +A L+ P SAAA A A AAAA A A A P A
Sbjct: 476 SGNSFPPQQAGSPLKR---PFSAAAAIAAAAAAAAAAAAAAAAAAPAPA 521
Score = 28.1 bits (61), Expect = 3.1
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 102 ARAAPGLRADVLPRSA--AAQAVAVAVAAAAVEVARATARPGA-APELSNSCP 151
A AAP L A P A AA AVA A AAAA + +P + S CP
Sbjct: 532 AAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSHSQKPSVPLIQASRPCP 584
>gi|4507483 thrombomodulin precursor [Homo sapiens]
Length = 575
Score = 32.0 bits (71), Expect = 0.22
Identities = 22/76 (28%), Positives = 30/76 (39%)
Query: 57 SEIFIAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRS 116
S +AP LQ + P A +G + C +GGC A PG P
Sbjct: 211 SSAAVAPLGLQLMCTAPPGAVQGHWAREAPGAWDCSVENGGCEHACNAIPGAPRCQCPAG 270
Query: 117 AAAQAVAVAVAAAAVE 132
AA QA + A+A +
Sbjct: 271 AALQADGRSCTASATQ 286
>gi|21618325 forkhead box E1 [Homo sapiens]
Length = 373
Score = 32.0 bits (71), Expect = 0.22
Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 72 LPRRAGR-GRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQAVAVAVAAAA 130
+PR AGR G+ W L P + G R R+D+ A A A AAAA
Sbjct: 114 IPREAGRPGKGNYWALDPNAEDMFESGSF-LRRRKRFKRSDLSTYPAYMHDAAAAAAAAA 172
Query: 131 VEVARATARPGAAP 144
A A PGA P
Sbjct: 173 AAAAAAAIFPGAVP 186
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 31.2 bits (69), Expect = 0.37
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 101 PARAAPGLRADV------LPRSAAAQAVAVAVAAAAVEVARATARPGAA 143
PA APG + P SAAA A A A AAAA A ++ PG A
Sbjct: 94 PAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPA 142
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 31.2 bits (69), Expect = 0.37
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 74 RRAGRGRVGQWLLQP--GSCCSRSGGCCGPARAAPGLRADVLPRSAAAQAVAVAVAAAAV 131
RR GR + G+W + G C GG AAPG ++ PR +A A VA A
Sbjct: 218 RRWGRKKPGRWGQEAVAGETCG-GGGKKPQKAAAPGAKSHKKPRRQWQKAAAEKVAVAGA 276
Query: 132 EVARATARPGAA 143
E + AA
Sbjct: 277 ESCGGRGQKAAA 288
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 31.2 bits (69), Expect = 0.37
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 100 GPARAA-PGLRADVLPRSAAAQAVAVAVAAAAVEVARATARPGAAPELSNSCP 151
GPA + PGL A LP SA A A A+A + A A A+P + PE S P
Sbjct: 252 GPAPSQLPGLAA--LPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGASTP 302
>gi|239757152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 30.8 bits (68), Expect = 0.48
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 88 PGSCCSRSGGCCGPARAAPGLRADV-----LPRSAAAQAVAVAVA 127
P C SR GGCC PA RA V PR + + ++VA
Sbjct: 59 PAHCASRHGGCCIPAVTFVAARAAVGIWPFQPREGPSASTQISVA 103
>gi|239751653 PREDICTED: hypothetical protein XP_002347960 [Homo
sapiens]
Length = 235
Score = 30.8 bits (68), Expect = 0.48
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 88 PGSCCSRSGGCCGPARAAPGLRADV-----LPRSAAAQAVAVAVA 127
P C SR GGCC PA RA V PR + + ++VA
Sbjct: 59 PAHCASRHGGCCIPAVTFVAARAAVGIWPFQPREGPSASTQISVA 103
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 30.8 bits (68), Expect = 0.48
Identities = 31/82 (37%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 67 QFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQAVAVAV 126
Q Y P G G G PG + +G P P AD +AAA A AVA
Sbjct: 236 QSMYGRPNYPGSGGFGA--SYPGGPNAPAGMGIPPHTRPP---ADFTQPAAAAAAAAVA- 289
Query: 127 AAAAVEVARATARPGAAPELSN 148
AAAA A ATA A E N
Sbjct: 290 AAAATATATATATVAALQETQN 311
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 30.8 bits (68), Expect = 0.48
Identities = 25/57 (43%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 88 PGS----CCSRSGGC--CGPARAAPGLRADVLPRSAAAQAVAVAVAAAAVEVARATA 138
PGS C + GG C A A R +LPRS A+A A A AAAA A A A
Sbjct: 264 PGSLSYRCKRKRGGAKDCLLAPHAGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAGA 320
>gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 30.4 bits (67), Expect = 0.63
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 53 QKRISEIFIAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADV 112
++R+ ++ + L+ LPRR G GQ L ++GG A P L +
Sbjct: 71 EQRVVQVLVGQAALEVTQQLPRRVGHLEGGQRPL----AAPQAGGSLQDAAEEPQLAGPL 126
Query: 113 LPRSAAAQAVAVAVAAAAVEVARATA 138
+ +A + AAAV VA A
Sbjct: 127 VCAAAVGIGLGRGRGAAAVGVAEGLA 152
>gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo
sapiens]
Length = 346
Score = 30.4 bits (67), Expect = 0.63
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 53 QKRISEIFIAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADV 112
++R+ ++ + L+ LPRR G GQ L ++GG A P L +
Sbjct: 136 EQRVVQVLVGQAALEVTQQLPRRVGHLEGGQRPL----AAPQAGGSLQDAAEEPQLAGPL 191
Query: 113 LPRSAAAQAVAVAVAAAAVEVARATA 138
+ +A + AAAV VA A
Sbjct: 192 VCAAAVGIGLGRGRGAAAVGVAEGLA 217
>gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo
sapiens]
Length = 346
Score = 30.4 bits (67), Expect = 0.63
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 53 QKRISEIFIAPTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCCGPARAAPGLRADV 112
++R+ ++ + L+ LPRR G GQ L ++GG A P L +
Sbjct: 136 EQRVVQVLVGQAALEVTQQLPRRVGHLEGGQRPL----AAPQAGGSLQDAAEEPQLAGPL 191
Query: 113 LPRSAAAQAVAVAVAAAAVEVARATA 138
+ +A + AAAV VA A
Sbjct: 192 VCAAAVGIGLGRGRGAAAVGVAEGLA 217
>gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]
Length = 485
Score = 30.4 bits (67), Expect = 0.63
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 100 GPARAAPGLRADVLPRSAAAQAVAVAVAAAAVEVARATARPGAAPELSNSCP 151
GP + P +D PRSA A A A A AAA+ A A A LS P
Sbjct: 27 GPT-SEPFPSSDDSPRSALAAATAAAAAAASAAAATAAFTTAKAAALSTKTP 77
>gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens]
Length = 501
Score = 30.4 bits (67), Expect = 0.63
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 100 GPARAAPGLRADVLPRSAAAQAVAVAVAAAAVEVARATARPGAAPELSNSCP 151
GP + P +D PRSA A A A A AAA+ A A A LS P
Sbjct: 27 GPT-SEPFPSSDDSPRSALAAATAAAAAAASAAAATAAFTTAKAAALSTKTP 77
>gi|67003568 skin-specific protein 32 [Homo sapiens]
Length = 250
Score = 30.0 bits (66), Expect = 0.82
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 62 APTNLQFKYSLPRRAGRGRVGQWLLQPGSCCSRSGGCC 99
AP + + PR G + +W+ +P +C + S GCC
Sbjct: 164 APCSTSYCCLAPRTFGVSPLRRWIQRPQNCNTGSSGCC 201
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 30.0 bits (66), Expect = 0.82
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 91 CCSRSGGCCGPARAAPGLRADVLPRSAAAQAVAVAVAAAAVEVARATARPGAAPELSNSC 150
C R G AA GL + SAAA A A A AA++ A A G+AP SC
Sbjct: 336 CSFRHPGLYQAPAAAAGLNSAA---SAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSC 392
>gi|146219841 PNMA-like 2 [Homo sapiens]
Length = 635
Score = 30.0 bits (66), Expect = 0.82
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 19/114 (16%)
Query: 10 PEERERSHGSHRAAWMDAVEGTRVKKHV--VLVADYPF------------SDPSEETQKR 55
P E G R W D + TRV + + +L+ D P + P+ ETQ +
Sbjct: 79 PREIPGKDGVWRVLWKDRAQDTRVLRQMRRLLLDDGPTQAAEAGTPGEAPTPPASETQAQ 138
Query: 56 IS-EIFIAPTNLQFKYSLPRRAGRGRVGQW----LLQPGSCCSRSGGCCGPARA 104
S E+ +L PRR RGR + L Q G SR G PAR+
Sbjct: 139 DSGEVTGQAGSLLGAARNPRRGRRGRRNRTRRNRLTQKGKKRSRGGRPSAPARS 192
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 29.6 bits (65), Expect = 1.1
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 103 RAAPGLRADVLPRSAAAQAVAVAVAAAAV--EVARATARPGAAP 144
R PG RA L R AAA A + AA + RA RPG P
Sbjct: 177 RCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLP 220
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 29.6 bits (65), Expect = 1.1
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 103 RAAPGLRADVLPRSAAAQAVAVAVAAAAV--EVARATARPGAAP 144
R PG RA L R AAA A + AA + RA RPG P
Sbjct: 177 RCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLP 220
>gi|239748384 PREDICTED: hypothetical protein XP_002346651 [Homo
sapiens]
Length = 246
Score = 29.6 bits (65), Expect = 1.1
Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 87 QPGSCCSRSGGCCGPARAAPGLRADVLPRSAAAQAVAVAVAAAA 130
QPGS RS C P R AP A+ R AA A A AAAA
Sbjct: 206 QPGS---RSSECLEPERRAPPRPANPAKRERAAAAPRSAPAAAA 246
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 29.6 bits (65), Expect = 1.1
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 103 RAAPGLRADVLPRSAAAQAVAVAVAAAAV--EVARATARPGAAP 144
R PG RA L R AAA A + AA + RA RPG P
Sbjct: 177 RCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLP 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.129 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,364,131
Number of Sequences: 37866
Number of extensions: 276378
Number of successful extensions: 1851
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 1642
Number of HSP's gapped (non-prelim): 219
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.