Search of human proteins with 239747698

Search of human proteins with 239747698

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239747698 PREDICTED: similar to hCG1784039 [Homo sapiens]
         (161 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239747698 PREDICTED: similar to hCG1784039 [Homo sapiens]          330   4e-91
gi|4503561 epithelial membrane protein 2 [Homo sapiens]               184   3e-47
gi|169163665 PREDICTED: similar to hCG1784039 [Homo sapiens]          101   3e-22
gi|169163222 PREDICTED: hypothetical protein LOC391359 [Homo sap...   101   3e-22
gi|4505907 peripheral myelin protein 22 [Homo sapiens]                 76   1e-14
gi|24430165 peripheral myelin protein 22 [Homo sapiens]                76   1e-14
gi|24430163 peripheral myelin protein 22 [Homo sapiens]                76   1e-14
gi|4503559 epithelial membrane protein 1 [Homo sapiens]                69   2e-12
gi|4503563 epithelial membrane protein 3 [Homo sapiens]                55   3e-08
gi|224451053 homeobox C14 [Homo sapiens]                               55   3e-08
gi|118600985 zinc finger protein 91 [Homo sapiens]                     47   7e-06
gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]           45   4e-05
gi|9624988 hypothetical protein LOC56260 [Homo sapiens]                41   4e-04
gi|239754959 PREDICTED: similar to Protein MOST-1 [Homo sapiens]       40   0.001
gi|18543327 tectonic family member 1 isoform 3 [Homo sapiens]          38   0.003
gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo...    37   0.007
gi|239916002 lens intrinsic membrane protein 2, 19kDa isoform 2 ...    37   0.007
gi|197304733 cytochrome b-561 domain containing 1 isoform 5 [Hom...    37   0.007
gi|197304731 cytochrome b-561 domain containing 1 isoform 4 [Hom...    37   0.007
gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Hom...    37   0.007
gi|239747192 PREDICTED: similar to hCG2038988 [Homo sapiens]           31   0.40 
gi|21361300 lens intrinsic membrane protein 2, 19kDa isoform 1 [...    29   1.5  
gi|54607089 semaphorin 3B isoform 2 precursor [Homo sapiens]           28   2.6  
gi|4759092 semaphorin 3B isoform 1 precursor [Homo sapiens]            28   2.6  
gi|132566684 scavenger receptor class B, member 1 isoform 1 [Hom...    28   4.5  
gi|132566680 scavenger receptor class B, member 1 isoform 2 [Hom...    27   9.9  
gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo ...    27   9.9  
gi|11545875 GDNF family receptor alpha 4 isoform a precursor [Ho...    27   9.9  
gi|22091448 GDNF family receptor alpha 4 isoform b precursor [Ho...    27   9.9  

>gi|239747698 PREDICTED: similar to hCG1784039 [Homo sapiens]
          Length = 161

 Score =  330 bits (845), Expect = 4e-91
 Identities = 161/161 (100%), Positives = 161/161 (100%)

Query: 1   MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTKCTVINDSFKEYSM 60
           MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTKCTVINDSFKEYSM
Sbjct: 1   MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTKCTVINDSFKEYSM 60

Query: 61  GRARWLTPVIPALWEAEACGLXGQEIETSLANIMKLLHHATMSYLCLMIAASIYTDRRDE 120
           GRARWLTPVIPALWEAEACGL GQEIETSLANIMKLLHHATMSYLCLMIAASIYTDRRDE
Sbjct: 61  GRARWLTPVIPALWEAEACGLXGQEIETSLANIMKLLHHATMSYLCLMIAASIYTDRRDE 120

Query: 121 TTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 161
           TTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE
Sbjct: 121 TTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 161


>gi|4503561 epithelial membrane protein 2 [Homo sapiens]
          Length = 167

 Score =  184 bits (467), Expect = 3e-47
 Identities = 101/167 (60%), Positives = 120/167 (71%), Gaps = 16/167 (9%)

Query: 1   MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTKCTVINDSFKEYSM 60
           MLVLL F +AFHITSAALLFIAT+DNAWWVG+EFFADVWRICT NT CTVINDSF+EYS 
Sbjct: 1   MLVLLAFIIAFHITSAALLFIATVDNAWWVGDEFFADVWRICTNNTNCTVINDSFQEYST 60

Query: 61  GRARWLTPVIPALWEAEACGLXGQEI-------ETSLANIMKLLHHATMSYLCLMIAASI 113
            +A   T ++  +    A  +   ++          L +I++L     MS LC+MIAASI
Sbjct: 61  LQAVQATMILSTILCCIAFFIFVLQLFRLKQGERFVLTSIIQL-----MSCLCVMIAASI 115

Query: 114 YTDRRDETTD----FYYLTKEGSYGYSYILAWVAFAFTFISSMMYLI 156
           YTDRR++  D    FY +T+EGSYGYSYILAWVAFA TFIS MMYLI
Sbjct: 116 YTDRREDIHDKNAKFYPVTREGSYGYSYILAWVAFACTFISGMMYLI 162


>gi|169163665 PREDICTED: similar to hCG1784039 [Homo sapiens]
          Length = 93

 Score =  101 bits (251), Expect = 3e-22
 Identities = 47/47 (100%), Positives = 47/47 (100%)

Query: 1  MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTK 47
          MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTK
Sbjct: 1  MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTK 47



 Score = 95.5 bits (236), Expect = 2e-20
 Identities = 45/45 (100%), Positives = 45/45 (100%)

Query: 117 RRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 161
           RRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE
Sbjct: 49  RRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 93


>gi|169163222 PREDICTED: hypothetical protein LOC391359 [Homo
          sapiens]
          Length = 93

 Score =  101 bits (251), Expect = 3e-22
 Identities = 47/47 (100%), Positives = 47/47 (100%)

Query: 1  MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTK 47
          MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTK
Sbjct: 1  MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTK 47



 Score = 95.5 bits (236), Expect = 2e-20
 Identities = 45/45 (100%), Positives = 45/45 (100%)

Query: 117 RRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 161
           RRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE
Sbjct: 49  RRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 93


>gi|4505907 peripheral myelin protein 22 [Homo sapiens]
          Length = 160

 Score = 75.9 bits (185), Expect = 1e-14
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 25/173 (14%)

Query: 1   MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTKCTVINDSFKEYSM 60
           ML+LL   +  H+    LLF++TI + W VGN    D+W+ C+ ++   V +     +S 
Sbjct: 1   MLLLLLSIIVLHVAVLVLLFVSTIVSQWIVGNGHATDLWQNCSTSSSGNVHHC----FSS 56

Query: 61  GRARWL-----TPVIPALWEAEACGLXGQEIETS-------LANIMKLLHHATMSYLCLM 108
               WL     T ++  ++   +  L   ++ T        +  I ++L     + LC+M
Sbjct: 57  SPNEWLQSVQATMILSIIFSILSLFLFFCQLFTLTKGGRFYITGIFQIL-----AGLCVM 111

Query: 109 IAASIYTDRRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 161
            AA+IYT R  E    ++L  + SYG++YILAWVAF    +S ++Y+I  + E
Sbjct: 112 SAAAIYTVRHPE----WHLNSDYSYGFAYILAWVAFPLALLSGVIYVILRKRE 160


>gi|24430165 peripheral myelin protein 22 [Homo sapiens]
          Length = 160

 Score = 75.9 bits (185), Expect = 1e-14
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 25/173 (14%)

Query: 1   MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTKCTVINDSFKEYSM 60
           ML+LL   +  H+    LLF++TI + W VGN    D+W+ C+ ++   V +     +S 
Sbjct: 1   MLLLLLSIIVLHVAVLVLLFVSTIVSQWIVGNGHATDLWQNCSTSSSGNVHHC----FSS 56

Query: 61  GRARWL-----TPVIPALWEAEACGLXGQEIETS-------LANIMKLLHHATMSYLCLM 108
               WL     T ++  ++   +  L   ++ T        +  I ++L     + LC+M
Sbjct: 57  SPNEWLQSVQATMILSIIFSILSLFLFFCQLFTLTKGGRFYITGIFQIL-----AGLCVM 111

Query: 109 IAASIYTDRRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 161
            AA+IYT R  E    ++L  + SYG++YILAWVAF    +S ++Y+I  + E
Sbjct: 112 SAAAIYTVRHPE----WHLNSDYSYGFAYILAWVAFPLALLSGVIYVILRKRE 160


>gi|24430163 peripheral myelin protein 22 [Homo sapiens]
          Length = 160

 Score = 75.9 bits (185), Expect = 1e-14
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 25/173 (14%)

Query: 1   MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADVWRICTKNTKCTVINDSFKEYSM 60
           ML+LL   +  H+    LLF++TI + W VGN    D+W+ C+ ++   V +     +S 
Sbjct: 1   MLLLLLSIIVLHVAVLVLLFVSTIVSQWIVGNGHATDLWQNCSTSSSGNVHHC----FSS 56

Query: 61  GRARWL-----TPVIPALWEAEACGLXGQEIETS-------LANIMKLLHHATMSYLCLM 108
               WL     T ++  ++   +  L   ++ T        +  I ++L     + LC+M
Sbjct: 57  SPNEWLQSVQATMILSIIFSILSLFLFFCQLFTLTKGGRFYITGIFQIL-----AGLCVM 111

Query: 109 IAASIYTDRRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 161
            AA+IYT R  E    ++L  + SYG++YILAWVAF    +S ++Y+I  + E
Sbjct: 112 SAAAIYTVRHPE----WHLNSDYSYGFAYILAWVAFPLALLSGVIYVILRKRE 160


>gi|4503559 epithelial membrane protein 1 [Homo sapiens]
          Length = 157

 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 21/165 (12%)

Query: 1   MLVLLTFTVAFHITSAALLFIATIDNAWWVGNEFFADV--WRICTKNTKCTVINDSFKEY 58
           MLVLL      HI +  +LF++TI N W V N   A V  W+ CT N  C+   DS    
Sbjct: 1   MLVLLAGIFVVHIATVIMLFVSTIANVWLVSNTVDASVGLWKNCT-NISCS---DSLSYA 56

Query: 59  SMGRARWLTP--VIPALWEAEACGLXGQEIETSLANIMKLLHHAT--MSYLCLMIAASIY 114
           S    + +    ++  ++   A  +   ++ T        L  AT  + +LC+++  SIY
Sbjct: 57  SEDALKTVQAFMILSIIFCVIALLVFVFQLFTMEKGNRFFLSGATTLVCWLCILVGVSIY 116

Query: 115 TDRRDETTDFYYLTKEGS---YGYSYILAWVAFAFTFISSMMYLI 156
           T         +Y  ++G+   +GYSYIL W+ F F+FI  ++YL+
Sbjct: 117 TS--------HYANRDGTQYHHGYSYILGWICFCFSFIIGVLYLV 153


>gi|4503563 epithelial membrane protein 3 [Homo sapiens]
          Length = 163

 Score = 55.1 bits (131), Expect = 3e-08
 Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 24/174 (13%)

Query: 1   MLVLLTFTVAFHITSAALLFIATIDNAWWV--GNE----FFADVWRICTKNTKCTVINDS 54
           M +LL    A HI    LLF+AT+D +WW   G E    ++   W   TK   C+ ++++
Sbjct: 1   MSLLLLVVSALHILILILLFVATLDKSWWTLPGKESLNLWYDCTWNNDTKTWACSNVSEN 60

Query: 55  FKEYSMGRARWLTPV-IPALWEAEACGLXGQEIETSLANIMK--LLHHATMSYLCLMIA- 110
                     WL  V +  +     C L        L  + +  L +   +  LC  +A 
Sbjct: 61  ---------GWLKAVQVLMVLSLILCCLSFILFMFQLYTMRRGGLFYATGLCQLCTSVAV 111

Query: 111 ---ASIYTDRRDETTDFYYLTKEGSYGYSYILAWVAFAFTFISSMMYLITEEAE 161
              A IY    +E  + +   + GS+GY + LAWVAF    +S ++Y+   + E
Sbjct: 112 FTGALIYAIHAEEILEKH--PRGGSFGYCFALAWVAFPLALVSGIIYIHLRKRE 163


>gi|224451053 homeobox C14 [Homo sapiens]
          Length = 188

 Score = 54.7 bits (130), Expect = 3e-08
 Identities = 27/33 (81%), Positives = 27/33 (81%)

Query: 60 MGRARWLTPVIPALWEAEACGLXGQEIETSLAN 92
          M RARWLTPVIPALWEAEA    GQEIET LAN
Sbjct: 1  MHRARWLTPVIPALWEAEAGRSRGQEIETILAN 33


>gi|118600985 zinc finger protein 91 [Homo sapiens]
          Length = 1191

 Score = 47.0 bits (110), Expect = 7e-06
 Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)

Query: 44   KNTKCTVINDSFKEYSM----GRARWLTPVIPALWEAEACGLXGQEIETSLANIMKLL 97
            K  KC     +F + S+     +   +TPVIP LWEAEA G  GQE+ET LAN +K L
Sbjct: 1132 KPYKCEKCGKAFNQSSILTNHKKIHTITPVIPLLWEAEAGGSRGQEMETILANTVKPL 1189


>gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]
          Length = 858

 Score = 44.7 bits (104), Expect = 4e-05
 Identities = 22/30 (73%), Positives = 24/30 (80%)

Query: 66  LTPVIPALWEAEACGLXGQEIETSLANIMK 95
           L PVIPALW+AEA    GQE ETSLANI+K
Sbjct: 666 LPPVIPALWKAEAGRSRGQEFETSLANIVK 695


>gi|9624988 hypothetical protein LOC56260 [Homo sapiens]
          Length = 159

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 17/26 (65%), Positives = 21/26 (80%)

Query: 53 DSFKEYSMGRARWLTPVIPALWEAEA 78
          + F+ +  GRARWL PVIPALWEA+A
Sbjct: 28 EHFENHWKGRARWLMPVIPALWEAKA 53


>gi|239754959 PREDICTED: similar to Protein MOST-1 [Homo sapiens]
          Length = 99

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 17/19 (89%), Positives = 18/19 (94%)

Query: 63 ARWLTPVIPALWEAEACGL 81
          ARWLTPVIPALW+AEA GL
Sbjct: 68 ARWLTPVIPALWKAEAGGL 86


>gi|18543327 tectonic family member 1 isoform 3 [Homo sapiens]
          Length = 573

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 16/20 (80%), Positives = 17/20 (85%)

Query: 61  GRARWLTPVIPALWEAEACG 80
           G+A W TPVIPALWEAEA G
Sbjct: 238 GQAYWFTPVIPALWEAEARG 257


>gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo
          sapiens]
          Length = 1198

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 18/25 (72%), Positives = 18/25 (72%)

Query: 68 PVIPALWEAEACGLXGQEIETSLAN 92
          PVIPALWE E     GQEIET LAN
Sbjct: 2  PVIPALWEVEMGRSQGQEIETILAN 26


>gi|239916002 lens intrinsic membrane protein 2, 19kDa isoform 2
           [Homo sapiens]
          Length = 173

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 15/147 (10%)

Query: 18  LLFIATIDNAWWV----GNEFFADVWRICTKNTKCTVINDSFKEYSMGRARWLTPVIPAL 73
           LL +A   + W      G+     +WR C  N KC +  DS   ++  RA  +   + A+
Sbjct: 18  LLVVAMATDHWMQYRLSGSFAHQGLWRYCLGN-KCYLQTDSIAYWNATRAFMILSALCAI 76

Query: 74  WEAEACGLXGQEIETSLANIMKLLHHATM---SYLCLMIAASIYTDRRDETTDFYYLTKE 130
                 G+     + + + I +      M   S L +++A +IYT      T  +   + 
Sbjct: 77  -SGIIMGIMAFAHQPTFSRISRPFSAGIMFFSSTLFVVLALAIYTG----VTVSFLGRRF 131

Query: 131 GS--YGYSYILAWVAFAFTFISSMMYL 155
           G   + +SYIL WVA   TF + + Y+
Sbjct: 132 GDWRFSWSYILGWVAVLMTFFAGIFYM 158


>gi|197304733 cytochrome b-561 domain containing 1 isoform 5 [Homo
          sapiens]
          Length = 128

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 15/20 (75%), Positives = 17/20 (85%)

Query: 61 GRARWLTPVIPALWEAEACG 80
          GRARW+ P IPALWEA+A G
Sbjct: 62 GRARWVMPEIPALWEADAGG 81


>gi|197304731 cytochrome b-561 domain containing 1 isoform 4 [Homo
          sapiens]
          Length = 133

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 15/20 (75%), Positives = 17/20 (85%)

Query: 61 GRARWLTPVIPALWEAEACG 80
          GRARW+ P IPALWEA+A G
Sbjct: 62 GRARWVMPEIPALWEADAGG 81


>gi|197304721 cytochrome b-561 domain containing 1 isoform 1 [Homo
          sapiens]
          Length = 251

 Score = 37.0 bits (84), Expect = 0.007
 Identities = 15/20 (75%), Positives = 17/20 (85%)

Query: 61 GRARWLTPVIPALWEAEACG 80
          GRARW+ P IPALWEA+A G
Sbjct: 62 GRARWVMPEIPALWEADAGG 81


>gi|239747192 PREDICTED: similar to hCG2038988 [Homo sapiens]
          Length = 141

 Score = 31.2 bits (69), Expect = 0.40
 Identities = 15/22 (68%), Positives = 15/22 (68%)

Query: 59  SMGRARWLTPVIPALWEAEACG 80
           S G     TPVIPALWEAEA G
Sbjct: 107 SDGPGTMATPVIPALWEAEAGG 128


>gi|21361300 lens intrinsic membrane protein 2, 19kDa isoform 1
           [Homo sapiens]
          Length = 215

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 103 SYLCLMIAASIYTDRRDETTDFYYLTKEGS--YGYSYILAWVAFAFTFISSMMYL 155
           S L +++A +IYT      T  +   + G   + +SYIL WVA   TF + + Y+
Sbjct: 150 STLFVVLALAIYTG----VTVSFLGRRFGDWRFSWSYILGWVAVLMTFFAGIFYM 200


>gi|54607089 semaphorin 3B isoform 2 precursor [Homo sapiens]
          Length = 748

 Score = 28.5 bits (62), Expect = 2.6
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 62  RARWLTPVIPALWEAEACGLXGQEIETSLANIMKLLHHATMSYL 105
           RA+ L    P  W  E C   G++I T   N +KLLH    ++L
Sbjct: 86  RAKKLAWPAPVEWREE-CNWAGKDIGTECMNFVKLLHAYNRTHL 128


>gi|4759092 semaphorin 3B isoform 1 precursor [Homo sapiens]
          Length = 749

 Score = 28.5 bits (62), Expect = 2.6
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 62  RARWLTPVIPALWEAEACGLXGQEIETSLANIMKLLHHATMSYL 105
           RA+ L    P  W  E C   G++I T   N +KLLH    ++L
Sbjct: 86  RAKKLAWPAPVEWREE-CNWAGKDIGTECMNFVKLLHAYNRTHL 128


>gi|132566684 scavenger receptor class B, member 1 isoform 1 [Homo
           sapiens]
          Length = 509

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)

Query: 69  VIPALWEAEACGLXGQEIE---TSLANIMKLLHHATMSYL---CLMIAASIYTDRRDETT 122
           V+P LW AE+  + G+ +    T L  + K++H+A    L   C+++   +    R +  
Sbjct: 410 VLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVICQIRSQEK 469

Query: 123 D--FYYLTKEGSYGYSYILAW 141
              F+  +K+GS     I A+
Sbjct: 470 CYLFWSSSKKGSKDKEAIQAY 490


>gi|132566680 scavenger receptor class B, member 1 isoform 2 [Homo
           sapiens]
          Length = 506

 Score = 26.6 bits (57), Expect = 9.9
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 69  VIPALWEAEACGLXGQEIE---TSLANIMKLLHHATMSYLCL 107
           V+P LW AE+  + G+ +    T L  + K++H+A    L L
Sbjct: 410 VLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYVLLAL 451


>gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo
           sapiens]
          Length = 230

 Score = 26.6 bits (57), Expect = 9.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)

Query: 63  ARWLTPVIPALWEA 76
           ARW TPVIP  W++
Sbjct: 175 ARWRTPVIPKCWDS 188


>gi|11545875 GDNF family receptor alpha 4 isoform a precursor
          [Homo sapiens]
          Length = 269

 Score = 26.6 bits (57), Expect = 9.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 17 ALLFIATIDNAWWVGNEFFADVWRICTKNTKCTVINDSFKEYSMGRA 63
          ALL +  + +A  VG     D    CT + +C  +   +    +GRA
Sbjct: 8  ALLLLLLLGSASSVGGNRCVDAAEACTADARCQRLRSEYVAQCLGRA 54


>gi|22091448 GDNF family receptor alpha 4 isoform b precursor
          [Homo sapiens]
          Length = 299

 Score = 26.6 bits (57), Expect = 9.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 17 ALLFIATIDNAWWVGNEFFADVWRICTKNTKCTVINDSFKEYSMGRA 63
          ALL +  + +A  VG     D    CT + +C  +   +    +GRA
Sbjct: 8  ALLLLLLLGSASSVGGNRCVDAAEACTADARCQRLRSEYVAQCLGRA 54


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.135    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,264,317
Number of Sequences: 37866
Number of extensions: 191449
Number of successful extensions: 508
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 470
Number of HSP's gapped (non-prelim): 35
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.