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Search of human proteins with 239747378
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747378 PREDICTED: hypothetical protein XP_002346573 [Homo
sapiens]
(181 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752834 PREDICTED: hypothetical protein [Homo sapiens] 376 e-105
gi|239747378 PREDICTED: hypothetical protein XP_002346573 [Homo ... 376 e-105
gi|239741203 PREDICTED: hypothetical protein XP_002342135 [Homo ... 376 e-105
gi|11415052 retinoid X receptor, beta [Homo sapiens] 40 8e-04
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 39 0.002
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 37 0.007
gi|222831660 family with sequence similarity 171, member A2 [Hom... 36 0.016
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 36 0.016
gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo... 35 0.027
gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo ... 35 0.027
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.035
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.035
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.035
gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo ... 35 0.046
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 35 0.046
gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo ... 34 0.060
gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo ... 34 0.060
gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo ... 34 0.060
gi|110832843 TBP-associated factor 4 [Homo sapiens] 34 0.060
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 34 0.078
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 34 0.078
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 34 0.078
gi|239749498 PREDICTED: hypothetical protein [Homo sapiens] 33 0.10
gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo ... 33 0.10
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 33 0.10
gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 33 0.10
gi|145701009 acetylcholinesterase collagen-like tail subunit iso... 33 0.13
gi|18105018 acetylcholinesterase collagen-like tail subunit isof... 33 0.13
gi|18105016 acetylcholinesterase collagen-like tail subunit isof... 33 0.13
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 33 0.13
>gi|239752834 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 376 bits (965), Expect = e-105
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60
MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA
Sbjct: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60
Query: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120
AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG
Sbjct: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120
Query: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180
KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV
Sbjct: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180
Query: 181 D 181
D
Sbjct: 181 D 181
>gi|239747378 PREDICTED: hypothetical protein XP_002346573 [Homo
sapiens]
Length = 181
Score = 376 bits (965), Expect = e-105
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60
MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA
Sbjct: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60
Query: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120
AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG
Sbjct: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120
Query: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180
KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV
Sbjct: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180
Query: 181 D 181
D
Sbjct: 181 D 181
>gi|239741203 PREDICTED: hypothetical protein XP_002342135 [Homo
sapiens]
Length = 181
Score = 376 bits (965), Expect = e-105
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60
MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA
Sbjct: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60
Query: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120
AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG
Sbjct: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120
Query: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180
KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV
Sbjct: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180
Query: 181 D 181
D
Sbjct: 181 D 181
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 40.4 bits (93), Expect = 8e-04
Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 33/137 (24%)
Query: 54 AASWRKAAASF-PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112
A+ WR+ PA +AAA +G + + P+P R+ +SGR +R+
Sbjct: 33 ASRWRRRRPWLDPAAAAAAAVAGG-----EQQTPEPEPGEAG----RDGMGDSGRDSRS- 82
Query: 113 DCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQ-------------- 158
P + +P GVP P P PS A + G+G P
Sbjct: 83 ---PDSSSPNPLPQGVPP----PSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPV 135
Query: 159 -QSARGGKGAPPPAPPG 174
S+ G G PPPAPPG
Sbjct: 136 ISSSMGSPGLPPPAPPG 152
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 38.9 bits (89), Expect = 0.002
Identities = 41/173 (23%), Positives = 55/173 (31%), Gaps = 3/173 (1%)
Query: 10 SASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKAAASFPAQRS 69
+ASR H+Q LQ PP G++ G PA+ A F + R
Sbjct: 2 AASRRSQHHHHHHQQQLQPAPGASAPPPPPPPPLSPGLAPGTTPASPTASGLAPFASPRH 61
Query: 70 AAA---SSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKVPL 126
A GS + R PDP+ + C + A S AG P
Sbjct: 62 GLALPEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPVVPAVSTSSAAGVAPNPA 121
Query: 127 GVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMT 179
G + P S S + + G+ A G P P AG T
Sbjct: 122 GSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTAPLGPGAAGPGT 174
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 37.4 bits (85), Expect = 0.007
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 72 ASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKVPLGVPET 131
A +G+ A + + GT T+ E++ S +E + D PPS T
Sbjct: 423 AQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPP----STDVPPSPEAGGTTGPWTSTT 478
Query: 132 LDYPHQADPAHSPSLAHTRAGTGRTPQQ--SARGGKGAPPPAPPGAGEMT 179
+ P +P+ PS + GTG P + R + P PPGA T
Sbjct: 479 SEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENST 528
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 36.2 bits (82), Expect = 0.016
Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 12/145 (8%)
Query: 43 CGGGVS---SGDPPAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELR 99
CGG + SGDP A ++F + R A+S P + R
Sbjct: 378 CGGPLEPAPSGDPEAPPPGPLHSAFSSSRDLASSRDDFFRTKPRSASRPAAEPSGARG-- 435
Query: 100 ESRRESGRGARAADCP----PSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGR 155
+GAR+A+ P P L R+ P G L P P L H A G+
Sbjct: 436 -GESAGLKGARSAEGPGGLEPGLEEHRRGPSGAAAFLHEPPSPPPPFDHYLGHKGAAEGK 494
Query: 156 TPQ--QSARGGKGAPPPAPPGAGEM 178
TP S + A PP+ AG++
Sbjct: 495 TPDFLLSQSVDQLARPPSLGQAGQL 519
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 36.2 bits (82), Expect = 0.016
Identities = 29/87 (33%), Positives = 32/87 (36%), Gaps = 12/87 (13%)
Query: 90 GTLTSCRELRESRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHT 149
G+ TS + SR G GA PPS R PL P P HSP
Sbjct: 469 GSPTSKTQTLPSRGPRGGGAGEQPPPPSA---RSTPLPGPPGSPRSSGGTPLHSPL---- 521
Query: 150 RAGTGRTPQQSARGGKGAPPPAPPGAG 176
TP+ S G G PP PG G
Sbjct: 522 -----HTPRASPTGTPGTTPPPSPGGG 543
>gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo
sapiens]
Length = 1198
Score = 35.4 bits (80), Expect = 0.027
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 86 PDPLGTLTSCRELRESRRESGRGARAADCPPSL--AGKRKVPLG--VPETLDYPHQADPA 141
PD T E RE E G+G A D PPS + +++P G +P D P +PA
Sbjct: 676 PDSKMFETEADEKREMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPA 735
Query: 142 HSP---SLAHTRAGTGRTPQQSARGGKGAPP-PAPPGAGEMT 179
S S + G P A K PP PP A +++
Sbjct: 736 PSQEPLSSKDSATSEGSPPGPDAPPSKDVPPCQEPPPAQDLS 777
>gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo
sapiens]
Length = 917
Score = 35.4 bits (80), Expect = 0.027
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 86 PDPLGTLTSCRELRESRRESGRGARAADCPPSL--AGKRKVPLG--VPETLDYPHQADPA 141
PD T E RE E G+G A D PPS + +++P G +P D P +PA
Sbjct: 395 PDSKMFETEADEKREMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPA 454
Query: 142 HSP---SLAHTRAGTGRTPQQSARGGKGAPP-PAPPGAGEMT 179
S S + G P A K PP PP A +++
Sbjct: 455 PSQEPLSSKDSATSEGSPPGPDAPPSKDVPPCQEPPPAQDLS 496
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 35.0 bits (79), Expect = 0.035
Identities = 46/177 (25%), Positives = 65/177 (36%), Gaps = 21/177 (11%)
Query: 7 FSNSASRPVTSACSEHRQSLQIRSS--LKVPPCNFQTACGGGVSSGDPPAASWRKAAASF 64
FS SAS P++ + Q+ + ++ L+VPP PPA+ +A
Sbjct: 544 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPP--------------SPPASPTLQAPRRP 589
Query: 65 PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKV 124
P + SG A P P + + L +G + A P L G
Sbjct: 590 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL-SGPDLAGHSSSATSTPEELRGYDSG 648
Query: 125 PLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTVD 181
P G P A+ A A +R G P + RG GAP P PP G + D
Sbjct: 649 PEG-GAAASPPPDAELAACHPAAWSR---GPAPPLAFRGAPGAPLPWPPATGPGSAD 701
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.0 bits (79), Expect = 0.035
Identities = 46/177 (25%), Positives = 65/177 (36%), Gaps = 21/177 (11%)
Query: 7 FSNSASRPVTSACSEHRQSLQIRSS--LKVPPCNFQTACGGGVSSGDPPAASWRKAAASF 64
FS SAS P++ + Q+ + ++ L+VPP PPA+ +A
Sbjct: 813 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPP--------------SPPASPTLQAPRRP 858
Query: 65 PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKV 124
P + SG A P P + + L +G + A P L G
Sbjct: 859 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL-SGPDLAGHSSSATSTPEELRGYDSG 917
Query: 125 PLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTVD 181
P G P A+ A A +R G P + RG GAP P PP G + D
Sbjct: 918 PEG-GAAASPPPDAELAACHPAAWSR---GPAPPLAFRGAPGAPLPWPPATGPGSAD 970
Score = 26.9 bits (58), Expect = 9.6
Identities = 39/161 (24%), Positives = 58/161 (36%), Gaps = 30/161 (18%)
Query: 13 RPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKAAASFPAQRSAAA 72
R S+ SEH ++ P + + GGG+ + S S PA RS +
Sbjct: 206 RKSVSSASEHS------TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA-RSGPS 258
Query: 73 SSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKVPLGVPETL 132
+ G+ A A P P G + LR + R D P+L
Sbjct: 259 ARGTPRAPAHPSQPKPKGL----QALRPPQVTPPR----KDAAPALG------------- 297
Query: 133 DYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPP 173
P + P +PS + T+A P +A PP+PP
Sbjct: 298 --PLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPP 336
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 35.0 bits (79), Expect = 0.035
Identities = 46/177 (25%), Positives = 65/177 (36%), Gaps = 21/177 (11%)
Query: 7 FSNSASRPVTSACSEHRQSLQIRSS--LKVPPCNFQTACGGGVSSGDPPAASWRKAAASF 64
FS SAS P++ + Q+ + ++ L+VPP PPA+ +A
Sbjct: 505 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPP--------------SPPASPTLQAPRRP 550
Query: 65 PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKV 124
P + SG A P P + + L +G + A P L G
Sbjct: 551 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL-SGPDLAGHSSSATSTPEELRGYDSG 609
Query: 125 PLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTVD 181
P G P A+ A A +R G P + RG GAP P PP G + D
Sbjct: 610 PEG-GAAASPPPDAELAACHPAAWSR---GPAPPLAFRGAPGAPLPWPPATGPGSAD 662
>gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo
sapiens]
Length = 519
Score = 34.7 bits (78), Expect = 0.046
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 93 TSCRELRESRRESGRGARAADCPPSL--AGKRKVPLG--VPETLDYPHQADPAHSP---S 145
T E RE E G+G A D PPS + +++P G +P D P +PA S S
Sbjct: 4 TEADEKREMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPSQEPLS 63
Query: 146 LAHTRAGTGRTPQQSARGGKGAPP-PAPPGAGEMT 179
+ G P A K PP PP A +++
Sbjct: 64 SKDSATSEGSPPGPDAPPSKDVPPCQEPPPAQDLS 98
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 34.7 bits (78), Expect = 0.046
Identities = 42/145 (28%), Positives = 49/145 (33%), Gaps = 20/145 (13%)
Query: 35 PPCNFQTACGGGVSSGDPPAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTS 94
PP CG +P AS + A PA SC A L P PL + S
Sbjct: 262 PPLPLLPPCGYPGLKAEP--ASPAQDAQEPPAPPPPLPPYASCSPRASLPAP-PLPGVNS 318
Query: 95 CRELRESRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTG 154
E +A PP AG + +P A P P L R G
Sbjct: 319 SSETPPPLPPKSPSFQA---PPQKAGAQALPAP---------PAPPGSQPFLQKKRHG-- 364
Query: 155 RTPQQSARGGKGAPPPAPPGAGEMT 179
+ A GGK PPPAPP T
Sbjct: 365 ---RPGAGGGKLNPPPAPPARSPTT 386
>gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo
sapiens]
Length = 166
Score = 34.3 bits (77), Expect = 0.060
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 24/128 (18%)
Query: 52 PPAASWRKAAASFPAQRSAAASS----GSCCAAAKLRHPDPLGTLTSCRELRESRRESGR 107
PP S + S P + +AA + CC+ + + R LR + R S R
Sbjct: 25 PPLQSHPENGVSAPGKGTAAKGARGGQSRCCS------------VVAARLLRLTPRSSAR 72
Query: 108 GARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGA 167
R + P+ G R+ D P + A +P G G +ARG
Sbjct: 73 RGRP-ESEPATNGTRQQG-------DLPALSAAAEAPREGGKEEGAGAREAGAARGRARG 124
Query: 168 PPPAPPGA 175
P P+PPG+
Sbjct: 125 PQPSPPGS 132
>gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo
sapiens]
Length = 177
Score = 34.3 bits (77), Expect = 0.060
Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 5/141 (3%)
Query: 41 TACGGGVSSGDPPAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPD--PLGTLTSCRE- 97
+A GG+ + + SW A A+ + + S CA + P P G +SCR
Sbjct: 16 SAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRA 75
Query: 98 LRESRRESGRGA--RAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGR 155
+R +G+ + R A S R V + V + + PA+ S A
Sbjct: 76 VRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASS 135
Query: 156 TPQQSARGGKGAPPPAPPGAG 176
T S P P PP G
Sbjct: 136 TTPPSMGPAAPGPGPTPPPPG 156
>gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo
sapiens]
Length = 166
Score = 34.3 bits (77), Expect = 0.060
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 24/128 (18%)
Query: 52 PPAASWRKAAASFPAQRSAAASS----GSCCAAAKLRHPDPLGTLTSCRELRESRRESGR 107
PP S + S P + +AA + CC+ + + R LR + R S R
Sbjct: 25 PPLQSHPENGVSAPGKGTAAKGARGGQSRCCS------------VVAARLLRLTPRSSAR 72
Query: 108 GARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGA 167
R + P+ G R+ D P + A +P G G +ARG
Sbjct: 73 RGRP-ESEPATNGTRQQG-------DLPALSAAAEAPREGGKEEGAGAREAGAARGRARG 124
Query: 168 PPPAPPGA 175
P P+PPG+
Sbjct: 125 PQPSPPGS 132
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 34.3 bits (77), Expect = 0.060
Identities = 41/137 (29%), Positives = 50/137 (36%), Gaps = 29/137 (21%)
Query: 46 GVSSGDPPAASWRKAAASF-----PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRE 100
G + PPA R P+ R +G AAKLR P P G+ SC +
Sbjct: 84 GAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLR-PPPEGSAGSCAPVPA 142
Query: 101 SRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQS 160
+ A AA P+ AG K PA +LA RAG G P
Sbjct: 143 A------AAVAAGPEPAPAGPAK----------------PAGPAALA-ARAGPGPGPGPG 179
Query: 161 ARGGKGAPPPAPPGAGE 177
G G PA PGA +
Sbjct: 180 PGPGPGPGKPAGPGAAQ 196
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 33.9 bits (76), Expect = 0.078
Identities = 33/129 (25%), Positives = 42/129 (32%), Gaps = 11/129 (8%)
Query: 53 PAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112
PA W K + SA + SCC + P G + E R +R + RG
Sbjct: 11 PACGWEKICQE--CKPSAGRCARSCCCCGRRSLPSVSGPVRGRAERRPARGKHVRGGGVG 68
Query: 113 DCPPSLAGKRKVP---LGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQ------QSARG 163
C S AG LGVP + P G+ P+ SA
Sbjct: 69 GCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAA 128
Query: 164 GKGAPPPAP 172
GK P P
Sbjct: 129 GKTPPSRVP 137
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 33.9 bits (76), Expect = 0.078
Identities = 33/129 (25%), Positives = 42/129 (32%), Gaps = 11/129 (8%)
Query: 53 PAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112
PA W K + SA + SCC + P G + E R +R + RG
Sbjct: 11 PACGWEKICQE--CKPSAGRCARSCCCCGRRSLPSVSGPVRGRAERRPARGKHVRGGGVG 68
Query: 113 DCPPSLAGKRKVP---LGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQ------QSARG 163
C S AG LGVP + P G+ P+ SA
Sbjct: 69 GCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAA 128
Query: 164 GKGAPPPAP 172
GK P P
Sbjct: 129 GKTPPSRVP 137
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 33.9 bits (76), Expect = 0.078
Identities = 33/129 (25%), Positives = 42/129 (32%), Gaps = 11/129 (8%)
Query: 53 PAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112
PA W K + SA + SCC + P G + E R +R + RG
Sbjct: 11 PACGWEKICQE--CKPSAGRCARSCCCCGRRSLPSVSGPVRGRAERRPARGKHVRGGGVG 68
Query: 113 DCPPSLAGKRKVP---LGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQ------QSARG 163
C S AG LGVP + P G+ P+ SA
Sbjct: 69 GCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAA 128
Query: 164 GKGAPPPAP 172
GK P P
Sbjct: 129 GKTPPSRVP 137
>gi|239749498 PREDICTED: hypothetical protein [Homo sapiens]
Length = 692
Score = 33.5 bits (75), Expect = 0.10
Identities = 42/128 (32%), Positives = 53/128 (41%), Gaps = 20/128 (15%)
Query: 56 SWRKAAASFPAQRSAAA---SSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112
S R AA P QR AAA SS + AA+KL P S + RR R +A+
Sbjct: 471 SRRLTAARVPLQRPAAAAASSSAAAAAASKLGGAGP----GSAEKADRHRRLLERRGQAS 526
Query: 113 DCPPSLAGKRKVPLGVPETLDYPHQADPA-HSPSLAHTR---------AGTGRTPQQSAR 162
P +L R+ P L Q PA + LA R AGTG ++
Sbjct: 527 GNPDTL---RQTRPKQPAPLRRAMQGGPAGYRAGLAALRTPPPAPAGNAGTGTGARKRPE 583
Query: 163 GGKGAPPP 170
GG+GA P
Sbjct: 584 GGRGARYP 591
>gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo
sapiens]
Length = 692
Score = 33.5 bits (75), Expect = 0.10
Identities = 42/128 (32%), Positives = 53/128 (41%), Gaps = 20/128 (15%)
Query: 56 SWRKAAASFPAQRSAAA---SSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112
S R AA P QR AAA SS + AA+KL P S + RR R +A+
Sbjct: 471 SRRLTAARVPLQRPAAAAASSSAAAAAASKLGGAGP----GSAEKADRHRRLLERRGQAS 526
Query: 113 DCPPSLAGKRKVPLGVPETLDYPHQADPA-HSPSLAHTR---------AGTGRTPQQSAR 162
P +L R+ P L Q PA + LA R AGTG ++
Sbjct: 527 GNPDTL---RQTRPKQPAPLRRAMQGGPAGYRAGLAALRTPPPAPAGNAGTGTGARKRPE 583
Query: 163 GGKGAPPP 170
GG+GA P
Sbjct: 584 GGRGARYP 591
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 33.5 bits (75), Expect = 0.10
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 127 GVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPP 173
G P+ +D + +P P L T R PQ G K PPP PP
Sbjct: 540 GFPDRIDELYLGNPMDPPDLLSVELSTSRPPQHLG-GVKREPPPRPP 585
>gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]
Length = 841
Score = 33.5 bits (75), Expect = 0.10
Identities = 44/174 (25%), Positives = 59/174 (33%), Gaps = 34/174 (19%)
Query: 14 PVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKAAASFPAQRSAAAS 73
P A S+ +S I +K P G G ++G PP A+ P Q+ A
Sbjct: 246 PPAGADSDSEESEAIYEEMKYP---LPEEAGEGRANGPPPLT------ATSPPQQPHALP 296
Query: 74 SGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCP-----PSLAGKRKVPLGV 128
+ H P L S R G + C P+L R L
Sbjct: 297 PHA--------HRRPASALPS--------RRDGTPTKTTPCEIPPPFPNLLQHRPPLLAF 340
Query: 129 PETLDYPHQADPAHS--PSLAHTRAGTGRTP--QQSARGGKGAPPPAPPGAGEM 178
P+ S P L H++ G TP Q AR + PPP PP A +
Sbjct: 341 PQAKSASRTPGDGVSRLPVLCHSKEPAGSTPAPQVPARERETPPPPPPPPAANL 394
>gi|145701009 acetylcholinesterase collagen-like tail subunit
isoform III precursor [Homo sapiens]
Length = 421
Score = 33.1 bits (74), Expect = 0.13
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 101 SRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQS 160
SR E G D P G++ P G P L + P P +A R TGR ++
Sbjct: 147 SRGEKGSRGEKGDLGPK--GEKGFP-GFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRG 203
Query: 161 ARGGKG----APPPAPPG 174
+G KG PP PG
Sbjct: 204 KQGQKGDSGVMGPPGKPG 221
>gi|18105018 acetylcholinesterase collagen-like tail subunit isoform
II [Homo sapiens]
Length = 445
Score = 33.1 bits (74), Expect = 0.13
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 101 SRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQS 160
SR E G D P G++ P G P L + P P +A R TGR ++
Sbjct: 171 SRGEKGSRGEKGDLGPK--GEKGFP-GFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRG 227
Query: 161 ARGGKG----APPPAPPG 174
+G KG PP PG
Sbjct: 228 KQGQKGDSGVMGPPGKPG 245
>gi|18105016 acetylcholinesterase collagen-like tail subunit isoform
I precursor [Homo sapiens]
Length = 455
Score = 33.1 bits (74), Expect = 0.13
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 101 SRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQS 160
SR E G D P G++ P G P L + P P +A R TGR ++
Sbjct: 181 SRGEKGSRGEKGDLGPK--GEKGFP-GFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRG 237
Query: 161 ARGGKG----APPPAPPG 174
+G KG PP PG
Sbjct: 238 KQGQKGDSGVMGPPGKPG 255
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 33.1 bits (74), Expect = 0.13
Identities = 35/138 (25%), Positives = 44/138 (31%), Gaps = 18/138 (13%)
Query: 45 GGVSSGDPPAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRE 104
G PP A + A P A +G A P P+G + +
Sbjct: 809 GPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGA---------P 859
Query: 105 SGRGARAADCPPSLAG-----KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQ 159
+GAR + PP G R P G P PA R TG
Sbjct: 860 GAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETG----P 915
Query: 160 SARGGKGAPPPAPPGAGE 177
+ R G+ PP P AGE
Sbjct: 916 AGRPGEVGPPGPPGPAGE 933
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.127 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,421,730
Number of Sequences: 37866
Number of extensions: 519082
Number of successful extensions: 3569
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 3190
Number of HSP's gapped (non-prelim): 661
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.