BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239747378 PREDICTED: hypothetical protein XP_002346573 [Homo sapiens] (181 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239752834 PREDICTED: hypothetical protein [Homo sapiens] 376 e-105 gi|239747378 PREDICTED: hypothetical protein XP_002346573 [Homo ... 376 e-105 gi|239741203 PREDICTED: hypothetical protein XP_002342135 [Homo ... 376 e-105 gi|11415052 retinoid X receptor, beta [Homo sapiens] 40 8e-04 gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 39 0.002 gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 37 0.007 gi|222831660 family with sequence similarity 171, member A2 [Hom... 36 0.016 gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 36 0.016 gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo... 35 0.027 gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo ... 35 0.027 gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.035 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.035 gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.035 gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo ... 35 0.046 gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 35 0.046 gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo ... 34 0.060 gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo ... 34 0.060 gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo ... 34 0.060 gi|110832843 TBP-associated factor 4 [Homo sapiens] 34 0.060 gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 34 0.078 gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 34 0.078 gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 34 0.078 gi|239749498 PREDICTED: hypothetical protein [Homo sapiens] 33 0.10 gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo ... 33 0.10 gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 33 0.10 gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 33 0.10 gi|145701009 acetylcholinesterase collagen-like tail subunit iso... 33 0.13 gi|18105018 acetylcholinesterase collagen-like tail subunit isof... 33 0.13 gi|18105016 acetylcholinesterase collagen-like tail subunit isof... 33 0.13 gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 33 0.13 >gi|239752834 PREDICTED: hypothetical protein [Homo sapiens] Length = 181 Score = 376 bits (965), Expect = e-105 Identities = 181/181 (100%), Positives = 181/181 (100%) Query: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA Sbjct: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60 Query: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG Sbjct: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120 Query: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV Sbjct: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180 Query: 181 D 181 D Sbjct: 181 D 181 >gi|239747378 PREDICTED: hypothetical protein XP_002346573 [Homo sapiens] Length = 181 Score = 376 bits (965), Expect = e-105 Identities = 181/181 (100%), Positives = 181/181 (100%) Query: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA Sbjct: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60 Query: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG Sbjct: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120 Query: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV Sbjct: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180 Query: 181 D 181 D Sbjct: 181 D 181 >gi|239741203 PREDICTED: hypothetical protein XP_002342135 [Homo sapiens] Length = 181 Score = 376 bits (965), Expect = e-105 Identities = 181/181 (100%), Positives = 181/181 (100%) Query: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA Sbjct: 1 MGSHFYFSNSASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKA 60 Query: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG Sbjct: 61 AASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAG 120 Query: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV Sbjct: 121 KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTV 180 Query: 181 D 181 D Sbjct: 181 D 181 >gi|11415052 retinoid X receptor, beta [Homo sapiens] Length = 533 Score = 40.4 bits (93), Expect = 8e-04 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 33/137 (24%) Query: 54 AASWRKAAASF-PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112 A+ WR+ PA +AAA +G + + P+P R+ +SGR +R+ Sbjct: 33 ASRWRRRRPWLDPAAAAAAAVAGG-----EQQTPEPEPGEAG----RDGMGDSGRDSRS- 82 Query: 113 DCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQ-------------- 158 P + +P GVP P P PS A + G+G P Sbjct: 83 ---PDSSSPNPLPQGVPP----PSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPV 135 Query: 159 -QSARGGKGAPPPAPPG 174 S+ G G PPPAPPG Sbjct: 136 ISSSMGSPGLPPPAPPG 152 >gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase [Homo sapiens] Length = 1327 Score = 38.9 bits (89), Expect = 0.002 Identities = 41/173 (23%), Positives = 55/173 (31%), Gaps = 3/173 (1%) Query: 10 SASRPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKAAASFPAQRS 69 +ASR H+Q LQ PP G++ G PA+ A F + R Sbjct: 2 AASRRSQHHHHHHQQQLQPAPGASAPPPPPPPPLSPGLAPGTTPASPTASGLAPFASPRH 61 Query: 70 AAA---SSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKVPL 126 A GS + R PDP+ + C + A S AG P Sbjct: 62 GLALPEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPVVPAVSTSSAAGVAPNPA 121 Query: 127 GVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMT 179 G + P S S + + G+ A G P P AG T Sbjct: 122 GSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTAPLGPGAAGPGT 174 >gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] Length = 845 Score = 37.4 bits (85), Expect = 0.007 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 72 ASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKVPLGVPET 131 A +G+ A + + GT T+ E++ S +E + D PPS T Sbjct: 423 AQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPP----STDVPPSPEAGGTTGPWTSTT 478 Query: 132 LDYPHQADPAHSPSLAHTRAGTGRTPQQ--SARGGKGAPPPAPPGAGEMT 179 + P +P+ PS + GTG P + R + P PPGA T Sbjct: 479 SEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGPPGAENST 528 >gi|222831660 family with sequence similarity 171, member A2 [Homo sapiens] Length = 826 Score = 36.2 bits (82), Expect = 0.016 Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 12/145 (8%) Query: 43 CGGGVS---SGDPPAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELR 99 CGG + SGDP A ++F + R A+S P + R Sbjct: 378 CGGPLEPAPSGDPEAPPPGPLHSAFSSSRDLASSRDDFFRTKPRSASRPAAEPSGARG-- 435 Query: 100 ESRRESGRGARAADCP----PSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGR 155 +GAR+A+ P P L R+ P G L P P L H A G+ Sbjct: 436 -GESAGLKGARSAEGPGGLEPGLEEHRRGPSGAAAFLHEPPSPPPPFDHYLGHKGAAEGK 494 Query: 156 TPQ--QSARGGKGAPPPAPPGAGEM 178 TP S + A PP+ AG++ Sbjct: 495 TPDFLLSQSVDQLARPPSLGQAGQL 519 >gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] Length = 778 Score = 36.2 bits (82), Expect = 0.016 Identities = 29/87 (33%), Positives = 32/87 (36%), Gaps = 12/87 (13%) Query: 90 GTLTSCRELRESRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHT 149 G+ TS + SR G GA PPS R PL P P HSP Sbjct: 469 GSPTSKTQTLPSRGPRGGGAGEQPPPPSA---RSTPLPGPPGSPRSSGGTPLHSPL---- 521 Query: 150 RAGTGRTPQQSARGGKGAPPPAPPGAG 176 TP+ S G G PP PG G Sbjct: 522 -----HTPRASPTGTPGTTPPPSPGGG 543 >gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo sapiens] Length = 1198 Score = 35.4 bits (80), Expect = 0.027 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 86 PDPLGTLTSCRELRESRRESGRGARAADCPPSL--AGKRKVPLG--VPETLDYPHQADPA 141 PD T E RE E G+G A D PPS + +++P G +P D P +PA Sbjct: 676 PDSKMFETEADEKREMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPA 735 Query: 142 HSP---SLAHTRAGTGRTPQQSARGGKGAPP-PAPPGAGEMT 179 S S + G P A K PP PP A +++ Sbjct: 736 PSQEPLSSKDSATSEGSPPGPDAPPSKDVPPCQEPPPAQDLS 777 >gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo sapiens] Length = 917 Score = 35.4 bits (80), Expect = 0.027 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 86 PDPLGTLTSCRELRESRRESGRGARAADCPPSL--AGKRKVPLG--VPETLDYPHQADPA 141 PD T E RE E G+G A D PPS + +++P G +P D P +PA Sbjct: 395 PDSKMFETEADEKREMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPA 454 Query: 142 HSP---SLAHTRAGTGRTPQQSARGGKGAPP-PAPPGAGEMT 179 S S + G P A K PP PP A +++ Sbjct: 455 PSQEPLSSKDSATSEGSPPGPDAPPSKDVPPCQEPPPAQDLS 496 >gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 855 Score = 35.0 bits (79), Expect = 0.035 Identities = 46/177 (25%), Positives = 65/177 (36%), Gaps = 21/177 (11%) Query: 7 FSNSASRPVTSACSEHRQSLQIRSS--LKVPPCNFQTACGGGVSSGDPPAASWRKAAASF 64 FS SAS P++ + Q+ + ++ L+VPP PPA+ +A Sbjct: 544 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPP--------------SPPASPTLQAPRRP 589 Query: 65 PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKV 124 P + SG A P P + + L +G + A P L G Sbjct: 590 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL-SGPDLAGHSSSATSTPEELRGYDSG 648 Query: 125 PLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTVD 181 P G P A+ A A +R G P + RG GAP P PP G + D Sbjct: 649 PEG-GAAASPPPDAELAACHPAAWSR---GPAPPLAFRGAPGAPLPWPPATGPGSAD 701 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 35.0 bits (79), Expect = 0.035 Identities = 46/177 (25%), Positives = 65/177 (36%), Gaps = 21/177 (11%) Query: 7 FSNSASRPVTSACSEHRQSLQIRSS--LKVPPCNFQTACGGGVSSGDPPAASWRKAAASF 64 FS SAS P++ + Q+ + ++ L+VPP PPA+ +A Sbjct: 813 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPP--------------SPPASPTLQAPRRP 858 Query: 65 PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKV 124 P + SG A P P + + L +G + A P L G Sbjct: 859 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL-SGPDLAGHSSSATSTPEELRGYDSG 917 Query: 125 PLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTVD 181 P G P A+ A A +R G P + RG GAP P PP G + D Sbjct: 918 PEG-GAAASPPPDAELAACHPAAWSR---GPAPPLAFRGAPGAPLPWPPATGPGSAD 970 Score = 26.9 bits (58), Expect = 9.6 Identities = 39/161 (24%), Positives = 58/161 (36%), Gaps = 30/161 (18%) Query: 13 RPVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKAAASFPAQRSAAA 72 R S+ SEH ++ P + + GGG+ + S S PA RS + Sbjct: 206 RKSVSSASEHS------TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA-RSGPS 258 Query: 73 SSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKVPLGVPETL 132 + G+ A A P P G + LR + R D P+L Sbjct: 259 ARGTPRAPAHPSQPKPKGL----QALRPPQVTPPR----KDAAPALG------------- 297 Query: 133 DYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPP 173 P + P +PS + T+A P +A PP+PP Sbjct: 298 --PLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPP 336 >gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens] Length = 816 Score = 35.0 bits (79), Expect = 0.035 Identities = 46/177 (25%), Positives = 65/177 (36%), Gaps = 21/177 (11%) Query: 7 FSNSASRPVTSACSEHRQSLQIRSS--LKVPPCNFQTACGGGVSSGDPPAASWRKAAASF 64 FS SAS P++ + Q+ + ++ L+VPP PPA+ +A Sbjct: 505 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPP--------------SPPASPTLQAPRRP 550 Query: 65 PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCPPSLAGKRKV 124 P + SG A P P + + L +G + A P L G Sbjct: 551 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL-SGPDLAGHSSSATSTPEELRGYDSG 609 Query: 125 PLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPPGAGEMTVD 181 P G P A+ A A +R G P + RG GAP P PP G + D Sbjct: 610 PEG-GAAASPPPDAELAACHPAAWSR---GPAPPLAFRGAPGAPLPWPPATGPGSAD 662 >gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo sapiens] Length = 519 Score = 34.7 bits (78), Expect = 0.046 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Query: 93 TSCRELRESRRESGRGARAADCPPSL--AGKRKVPLG--VPETLDYPHQADPAHSP---S 145 T E RE E G+G A D PPS + +++P G +P D P +PA S S Sbjct: 4 TEADEKREMALEEGKGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPSQEPLS 63 Query: 146 LAHTRAGTGRTPQQSARGGKGAPP-PAPPGAGEMT 179 + G P A K PP PP A +++ Sbjct: 64 SKDSATSEGSPPGPDAPPSKDVPPCQEPPPAQDLS 98 >gi|122937496 WAS/WASL interacting protein family, member 3 [Homo sapiens] Length = 483 Score = 34.7 bits (78), Expect = 0.046 Identities = 42/145 (28%), Positives = 49/145 (33%), Gaps = 20/145 (13%) Query: 35 PPCNFQTACGGGVSSGDPPAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTS 94 PP CG +P AS + A PA SC A L P PL + S Sbjct: 262 PPLPLLPPCGYPGLKAEP--ASPAQDAQEPPAPPPPLPPYASCSPRASLPAP-PLPGVNS 318 Query: 95 CRELRESRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTG 154 E +A PP AG + +P A P P L R G Sbjct: 319 SSETPPPLPPKSPSFQA---PPQKAGAQALPAP---------PAPPGSQPFLQKKRHG-- 364 Query: 155 RTPQQSARGGKGAPPPAPPGAGEMT 179 + A GGK PPPAPP T Sbjct: 365 ---RPGAGGGKLNPPPAPPARSPTT 386 >gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo sapiens] Length = 166 Score = 34.3 bits (77), Expect = 0.060 Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 24/128 (18%) Query: 52 PPAASWRKAAASFPAQRSAAASS----GSCCAAAKLRHPDPLGTLTSCRELRESRRESGR 107 PP S + S P + +AA + CC+ + + R LR + R S R Sbjct: 25 PPLQSHPENGVSAPGKGTAAKGARGGQSRCCS------------VVAARLLRLTPRSSAR 72 Query: 108 GARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGA 167 R + P+ G R+ D P + A +P G G +ARG Sbjct: 73 RGRP-ESEPATNGTRQQG-------DLPALSAAAEAPREGGKEEGAGAREAGAARGRARG 124 Query: 168 PPPAPPGA 175 P P+PPG+ Sbjct: 125 PQPSPPGS 132 >gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo sapiens] Length = 177 Score = 34.3 bits (77), Expect = 0.060 Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 5/141 (3%) Query: 41 TACGGGVSSGDPPAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPD--PLGTLTSCRE- 97 +A GG+ + + SW A A+ + + S CA + P P G +SCR Sbjct: 16 SAVAGGLGAQPAQSGSWPAAGAASSRRMKYSLPSDGLCALSTGTTPGGAPSGAHSSCRRA 75 Query: 98 LRESRRESGRGA--RAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGR 155 +R +G+ + R A S R V + V + + PA+ S A Sbjct: 76 VRPGLSVAGKASAPRPASHLYSKLRPRLVSVTVSTSSPSAWKPSPANCSSSGKDEAAASS 135 Query: 156 TPQQSARGGKGAPPPAPPGAG 176 T S P P PP G Sbjct: 136 TTPPSMGPAAPGPGPTPPPPG 156 >gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo sapiens] Length = 166 Score = 34.3 bits (77), Expect = 0.060 Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 24/128 (18%) Query: 52 PPAASWRKAAASFPAQRSAAASS----GSCCAAAKLRHPDPLGTLTSCRELRESRRESGR 107 PP S + S P + +AA + CC+ + + R LR + R S R Sbjct: 25 PPLQSHPENGVSAPGKGTAAKGARGGQSRCCS------------VVAARLLRLTPRSSAR 72 Query: 108 GARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGA 167 R + P+ G R+ D P + A +P G G +ARG Sbjct: 73 RGRP-ESEPATNGTRQQG-------DLPALSAAAEAPREGGKEEGAGAREAGAARGRARG 124 Query: 168 PPPAPPGA 175 P P+PPG+ Sbjct: 125 PQPSPPGS 132 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 34.3 bits (77), Expect = 0.060 Identities = 41/137 (29%), Positives = 50/137 (36%), Gaps = 29/137 (21%) Query: 46 GVSSGDPPAASWRKAAASF-----PAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRE 100 G + PPA R P+ R +G AAKLR P P G+ SC + Sbjct: 84 GAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLR-PPPEGSAGSCAPVPA 142 Query: 101 SRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQS 160 + A AA P+ AG K PA +LA RAG G P Sbjct: 143 A------AAVAAGPEPAPAGPAK----------------PAGPAALA-ARAGPGPGPGPG 179 Query: 161 ARGGKGAPPPAPPGAGE 177 G G PA PGA + Sbjct: 180 PGPGPGPGKPAGPGAAQ 196 >gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] Length = 449 Score = 33.9 bits (76), Expect = 0.078 Identities = 33/129 (25%), Positives = 42/129 (32%), Gaps = 11/129 (8%) Query: 53 PAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112 PA W K + SA + SCC + P G + E R +R + RG Sbjct: 11 PACGWEKICQE--CKPSAGRCARSCCCCGRRSLPSVSGPVRGRAERRPARGKHVRGGGVG 68 Query: 113 DCPPSLAGKRKVP---LGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQ------QSARG 163 C S AG LGVP + P G+ P+ SA Sbjct: 69 GCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAA 128 Query: 164 GKGAPPPAP 172 GK P P Sbjct: 129 GKTPPSRVP 137 >gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo sapiens] Length = 402 Score = 33.9 bits (76), Expect = 0.078 Identities = 33/129 (25%), Positives = 42/129 (32%), Gaps = 11/129 (8%) Query: 53 PAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112 PA W K + SA + SCC + P G + E R +R + RG Sbjct: 11 PACGWEKICQE--CKPSAGRCARSCCCCGRRSLPSVSGPVRGRAERRPARGKHVRGGGVG 68 Query: 113 DCPPSLAGKRKVP---LGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQ------QSARG 163 C S AG LGVP + P G+ P+ SA Sbjct: 69 GCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAA 128 Query: 164 GKGAPPPAP 172 GK P P Sbjct: 129 GKTPPSRVP 137 >gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo sapiens] Length = 449 Score = 33.9 bits (76), Expect = 0.078 Identities = 33/129 (25%), Positives = 42/129 (32%), Gaps = 11/129 (8%) Query: 53 PAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112 PA W K + SA + SCC + P G + E R +R + RG Sbjct: 11 PACGWEKICQE--CKPSAGRCARSCCCCGRRSLPSVSGPVRGRAERRPARGKHVRGGGVG 68 Query: 113 DCPPSLAGKRKVP---LGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQ------QSARG 163 C S AG LGVP + P G+ P+ SA Sbjct: 69 GCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASSAAA 128 Query: 164 GKGAPPPAP 172 GK P P Sbjct: 129 GKTPPSRVP 137 >gi|239749498 PREDICTED: hypothetical protein [Homo sapiens] Length = 692 Score = 33.5 bits (75), Expect = 0.10 Identities = 42/128 (32%), Positives = 53/128 (41%), Gaps = 20/128 (15%) Query: 56 SWRKAAASFPAQRSAAA---SSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112 S R AA P QR AAA SS + AA+KL P S + RR R +A+ Sbjct: 471 SRRLTAARVPLQRPAAAAASSSAAAAAASKLGGAGP----GSAEKADRHRRLLERRGQAS 526 Query: 113 DCPPSLAGKRKVPLGVPETLDYPHQADPA-HSPSLAHTR---------AGTGRTPQQSAR 162 P +L R+ P L Q PA + LA R AGTG ++ Sbjct: 527 GNPDTL---RQTRPKQPAPLRRAMQGGPAGYRAGLAALRTPPPAPAGNAGTGTGARKRPE 583 Query: 163 GGKGAPPP 170 GG+GA P Sbjct: 584 GGRGARYP 591 >gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo sapiens] Length = 692 Score = 33.5 bits (75), Expect = 0.10 Identities = 42/128 (32%), Positives = 53/128 (41%), Gaps = 20/128 (15%) Query: 56 SWRKAAASFPAQRSAAA---SSGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAA 112 S R AA P QR AAA SS + AA+KL P S + RR R +A+ Sbjct: 471 SRRLTAARVPLQRPAAAAASSSAAAAAASKLGGAGP----GSAEKADRHRRLLERRGQAS 526 Query: 113 DCPPSLAGKRKVPLGVPETLDYPHQADPA-HSPSLAHTR---------AGTGRTPQQSAR 162 P +L R+ P L Q PA + LA R AGTG ++ Sbjct: 527 GNPDTL---RQTRPKQPAPLRRAMQGGPAGYRAGLAALRTPPPAPAGNAGTGTGARKRPE 583 Query: 163 GGKGAPPP 170 GG+GA P Sbjct: 584 GGRGARYP 591 >gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sapiens] Length = 1086 Score = 33.5 bits (75), Expect = 0.10 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 127 GVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQSARGGKGAPPPAPP 173 G P+ +D + +P P L T R PQ G K PPP PP Sbjct: 540 GFPDRIDELYLGNPMDPPDLLSVELSTSRPPQHLG-GVKREPPPRPP 585 >gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] Length = 841 Score = 33.5 bits (75), Expect = 0.10 Identities = 44/174 (25%), Positives = 59/174 (33%), Gaps = 34/174 (19%) Query: 14 PVTSACSEHRQSLQIRSSLKVPPCNFQTACGGGVSSGDPPAASWRKAAASFPAQRSAAAS 73 P A S+ +S I +K P G G ++G PP A+ P Q+ A Sbjct: 246 PPAGADSDSEESEAIYEEMKYP---LPEEAGEGRANGPPPLT------ATSPPQQPHALP 296 Query: 74 SGSCCAAAKLRHPDPLGTLTSCRELRESRRESGRGARAADCP-----PSLAGKRKVPLGV 128 + H P L S R G + C P+L R L Sbjct: 297 PHA--------HRRPASALPS--------RRDGTPTKTTPCEIPPPFPNLLQHRPPLLAF 340 Query: 129 PETLDYPHQADPAHS--PSLAHTRAGTGRTP--QQSARGGKGAPPPAPPGAGEM 178 P+ S P L H++ G TP Q AR + PPP PP A + Sbjct: 341 PQAKSASRTPGDGVSRLPVLCHSKEPAGSTPAPQVPARERETPPPPPPPPAANL 394 >gi|145701009 acetylcholinesterase collagen-like tail subunit isoform III precursor [Homo sapiens] Length = 421 Score = 33.1 bits (74), Expect = 0.13 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%) Query: 101 SRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQS 160 SR E G D P G++ P G P L + P P +A R TGR ++ Sbjct: 147 SRGEKGSRGEKGDLGPK--GEKGFP-GFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRG 203 Query: 161 ARGGKG----APPPAPPG 174 +G KG PP PG Sbjct: 204 KQGQKGDSGVMGPPGKPG 221 >gi|18105018 acetylcholinesterase collagen-like tail subunit isoform II [Homo sapiens] Length = 445 Score = 33.1 bits (74), Expect = 0.13 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%) Query: 101 SRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQS 160 SR E G D P G++ P G P L + P P +A R TGR ++ Sbjct: 171 SRGEKGSRGEKGDLGPK--GEKGFP-GFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRG 227 Query: 161 ARGGKG----APPPAPPG 174 +G KG PP PG Sbjct: 228 KQGQKGDSGVMGPPGKPG 245 >gi|18105016 acetylcholinesterase collagen-like tail subunit isoform I precursor [Homo sapiens] Length = 455 Score = 33.1 bits (74), Expect = 0.13 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 7/78 (8%) Query: 101 SRRESGRGARAADCPPSLAGKRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQS 160 SR E G D P G++ P G P L + P P +A R TGR ++ Sbjct: 181 SRGEKGSRGEKGDLGPK--GEKGFP-GFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRG 237 Query: 161 ARGGKG----APPPAPPG 174 +G KG PP PG Sbjct: 238 KQGQKGDSGVMGPPGKPG 255 >gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] Length = 1464 Score = 33.1 bits (74), Expect = 0.13 Identities = 35/138 (25%), Positives = 44/138 (31%), Gaps = 18/138 (13%) Query: 45 GGVSSGDPPAASWRKAAASFPAQRSAAASSGSCCAAAKLRHPDPLGTLTSCRELRESRRE 104 G PP A + A P A +G A P P+G + + Sbjct: 809 GPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGA---------P 859 Query: 105 SGRGARAADCPPSLAG-----KRKVPLGVPETLDYPHQADPAHSPSLAHTRAGTGRTPQQ 159 +GAR + PP G R P G P PA R TG Sbjct: 860 GAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETG----P 915 Query: 160 SARGGKGAPPPAPPGAGE 177 + R G+ PP P AGE Sbjct: 916 AGRPGEVGPPGPPGPAGE 933 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.313 0.127 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,421,730 Number of Sequences: 37866 Number of extensions: 519082 Number of successful extensions: 3569 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 302 Number of HSP's that attempted gapping in prelim test: 3190 Number of HSP's gapped (non-prelim): 661 length of query: 181 length of database: 18,247,518 effective HSP length: 96 effective length of query: 85 effective length of database: 14,612,382 effective search space: 1242052470 effective search space used: 1242052470 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.