BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239747238 PREDICTED: similar to coiled-coil-helix-coiled-coil-helix domain containing 2 isoform 3 [Homo sapiens] (184 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239752710 PREDICTED: similar to coiled-coil-helix-coiled-coil... 375 e-104 gi|239747238 PREDICTED: similar to coiled-coil-helix-coiled-coil... 375 e-104 gi|239741059 PREDICTED: similar to coiled-coil-helix-coiled-coil... 375 e-104 gi|7705851 coiled-coil-helix-coiled-coil-helix domain containing... 288 1e-78 gi|47497976 coiled-coil-helix-coiled-coil-helix domain containin... 145 2e-35 gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo ... 43 2e-04 gi|153791535 general control of amino acid synthesis 5-like 2 [H... 43 2e-04 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 42 3e-04 gi|50428940 mediator complex subunit 25 [Homo sapiens] 42 4e-04 gi|163965366 nascent polypeptide-associated complex alpha subuni... 41 7e-04 gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 9e-04 gi|31377750 YTH domain family, member 1 [Homo sapiens] 40 9e-04 gi|58761548 tau tubulin kinase 1 [Homo sapiens] 40 0.001 gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 40 0.001 gi|239753493 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001 gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo ... 40 0.001 gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo ... 40 0.001 gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 40 0.001 gi|4758392 forkhead box D1 [Homo sapiens] 40 0.001 gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 39 0.002 gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003 gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 39 0.003 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.003 gi|22748651 ORAI calcium release-activated calcium modulator 3 [... 39 0.003 gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 38 0.004 gi|4505101 microtubule-associated protein 7 [Homo sapiens] 38 0.004 gi|169209217 PREDICTED: similar to hCG2042704 [Homo sapiens] 38 0.006 gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007 gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 37 0.007 gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 37 0.007 >gi|239752710 PREDICTED: similar to coiled-coil-helix-coiled-coil-helix domain containing 2 [Homo sapiens] Length = 184 Score = 375 bits (963), Expect = e-104 Identities = 184/184 (100%), Positives = 184/184 (100%) Query: 1 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR 60 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR Sbjct: 1 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR 60 Query: 61 PAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGG 120 PAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGG Sbjct: 61 PAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGG 120 Query: 121 SNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIKLCEGFNEVLKQCRLA 180 SNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIKLCEGFNEVLKQCRLA Sbjct: 121 SNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIKLCEGFNEVLKQCRLA 180 Query: 181 NGLA 184 NGLA Sbjct: 181 NGLA 184 >gi|239747238 PREDICTED: similar to coiled-coil-helix-coiled-coil-helix domain containing 2 isoform 3 [Homo sapiens] Length = 184 Score = 375 bits (963), Expect = e-104 Identities = 184/184 (100%), Positives = 184/184 (100%) Query: 1 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR 60 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR Sbjct: 1 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR 60 Query: 61 PAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGG 120 PAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGG Sbjct: 61 PAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGG 120 Query: 121 SNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIKLCEGFNEVLKQCRLA 180 SNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIKLCEGFNEVLKQCRLA Sbjct: 121 SNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIKLCEGFNEVLKQCRLA 180 Query: 181 NGLA 184 NGLA Sbjct: 181 NGLA 184 >gi|239741059 PREDICTED: similar to coiled-coil-helix-coiled-coil-helix domain containing 2 isoform 3 [Homo sapiens] Length = 184 Score = 375 bits (963), Expect = e-104 Identities = 184/184 (100%), Positives = 184/184 (100%) Query: 1 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR 60 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR Sbjct: 1 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR 60 Query: 61 PAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGG 120 PAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGG Sbjct: 61 PAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGG 120 Query: 121 SNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIKLCEGFNEVLKQCRLA 180 SNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIKLCEGFNEVLKQCRLA Sbjct: 121 SNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIKLCEGFNEVLKQCRLA 180 Query: 181 NGLA 184 NGLA Sbjct: 181 NGLA 184 >gi|7705851 coiled-coil-helix-coiled-coil-helix domain containing 2 [Homo sapiens] Length = 151 Score = 288 bits (738), Expect = 1e-78 Identities = 142/148 (95%), Positives = 143/148 (96%) Query: 37 GSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTA 96 GSRS TSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPS VGSSAAAPRQPGLMAQMATTA Sbjct: 4 GSRSRTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSAVGSSAAAPRQPGLMAQMATTA 63 Query: 97 AGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLE 156 AGVAVGSAVGH LGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQPC EIKQFLE Sbjct: 64 AGVAVGSAVGHTLGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQPCLYEIKQFLE 123 Query: 157 CAENQGDIKLCEGFNEVLKQCRLANGLA 184 CA+NQGDIKLCEGFNEVLKQCRLANGLA Sbjct: 124 CAQNQGDIKLCEGFNEVLKQCRLANGLA 151 >gi|47497976 coiled-coil-helix-coiled-coil-helix domain containing 10 [Homo sapiens] Length = 142 Score = 145 bits (365), Expect = 2e-35 Identities = 75/139 (53%), Positives = 92/139 (66%), Gaps = 2/139 (1%) Query: 47 PPASRAPQMRAAPRPA-PVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAV 105 P SR+ R A RPA P A PPA PPS + A QPGLMAQMATTAAGVAVGSAV Sbjct: 2 PRGSRSAASRPASRPAAPSAHPPAHPPPSAAAPAPAPSGQPGLMAQMATTAAGVAVGSAV 61 Query: 106 GHILGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQPCFCEIKQFLECAENQGDIK 165 GH++G A+TG FSGGS +EP++P + Q PC EI+QFL+C+ Q D+ Sbjct: 62 GHVMGSALTGAFSGGS-SEPSQPAVQQAPTPAAPQPLQMGPCAYEIRQFLDCSTTQSDLS 120 Query: 166 LCEGFNEVLKQCRLANGLA 184 LCEGF+E LKQC+ +GL+ Sbjct: 121 LCEGFSEALKQCKYYHGLS 139 >gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo sapiens] Length = 918 Score = 42.7 bits (99), Expect = 2e-04 Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 9/100 (9%) Query: 3 LSVLERSKPGGRSHLALRWLSHVRRPSRRVPRIPG-------SRSHTSRMAPPASRAPQM 55 LS R+ PG S + S PSR +P P SR + A PA+ P Sbjct: 811 LSRAARNSPGPGSQIERTESSRRPPPSRPIPPAPNCIVSQDFSRPRPPQKALPANPVPGR 870 Query: 56 RAAPRP--APVAQPPAAAPPSTVGSSAAAPRQPGLMAQMA 93 R+ PRP A +PP A P + +A AP+ P +Q A Sbjct: 871 RSLPRPGGASPLRPPGAGPQQSRPLAALAPKFPEYRSQRA 910 >gi|153791535 general control of amino acid synthesis 5-like 2 [Homo sapiens] Length = 837 Score = 42.7 bits (99), Expect = 2e-04 Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 5/98 (5%) Query: 45 MAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSA 104 MA P S+AP A +P P+ P A P+ S A+AP A AA A + Sbjct: 1 MAEP-SQAPTPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTG 59 Query: 105 VGHILGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQ 142 G G + G GS +PARP ++ Q+ + AQ Sbjct: 60 TG---GPGVGSG-GAGSGGDPARPGLSQQQRASQRKAQ 93 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 42.0 bits (97), Expect = 3e-04 Identities = 40/120 (33%), Positives = 47/120 (39%), Gaps = 11/120 (9%) Query: 33 PRIP-GSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAA-----PRQP 86 PR P G+ + + APP + AP P PAPVA A P ++A A P QP Sbjct: 112 PRAPRGAPAAAAAAAPPPTPAPP----PPPAPVAAAAPARAPRAAAAAATAPPSPGPAQP 167 Query: 87 GLMAQMATTAAGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQP 146 G AQ A A A + G A AR PQ P QQQQP Sbjct: 168 GPRAQRAAPLAAPPPAPAAPPAVAPP-AGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQP 226 Score = 28.1 bits (61), Expect = 4.5 Identities = 29/103 (28%), Positives = 38/103 (36%), Gaps = 19/103 (18%) Query: 33 PRIPGSRSHTSR---MAPPASRAPQM-------RAAPRPAPVAQ----PPAAAPPSTVGS 78 P PG R+ + PPA AP R AP PA A+ PP PP+ Sbjct: 164 PAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQ 223 Query: 79 SAAAPRQP-----GLMAQMATTAAGVAVGSAVGHILGHAITGG 116 P QP G + A V++ V ++ G GG Sbjct: 224 QQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGG 266 >gi|50428940 mediator complex subunit 25 [Homo sapiens] Length = 747 Score = 41.6 bits (96), Expect = 4e-04 Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 45 MAPPASRAPQMRAAPRPAPVAQPPAAAPPSTV-----GSSAAAPRQPGLMAQMATTAAGV 99 + PP S+AP + P P +PP A+ PS V GS A QPG + T A G Sbjct: 316 VGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGG 375 Query: 100 AVGSAVGHILGHAITGGFSGGSN 122 G + LG GG SN Sbjct: 376 VSGPSPAQ-LGAPALGGQQSVSN 397 Score = 26.9 bits (58), Expect = 9.9 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 59 PRPAPVAQPPAAAPPSTVGSSAAAPRQPG 87 P+P AQPP AP G +A+ P PG Sbjct: 605 PQPQGTAQPPPGAPQGPPG-AASGPPPPG 632 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 40.8 bits (94), Expect = 7e-04 Identities = 36/114 (31%), Positives = 42/114 (36%), Gaps = 9/114 (7%) Query: 36 PGSRSHTSRMAPPASRAPQMRAAPRPAP----VAQPPAAAPPSTVGSSAAAPRQPGLMAQ 91 P + S PPA P + +P P + PPAA PPS GS AA P G Sbjct: 1000 PATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTT 1059 Query: 92 MATT----AAGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEPQGTQPA 141 A T G A S G A T G A P+ P P T P+ Sbjct: 1060 PAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPS-PKGAPMPPAATPPS 1112 Score = 35.0 bits (79), Expect = 0.036 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 36 PGSRSHTSRMAPPASRAPQMR---AAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQM 92 P + S PPA+ P + A P P PPAA PPS G A P + Sbjct: 1071 PATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPA 1130 Query: 93 AT 94 AT Sbjct: 1131 AT 1132 Score = 33.9 bits (76), Expect = 0.081 Identities = 36/128 (28%), Positives = 46/128 (35%), Gaps = 16/128 (12%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMR---AAPRPAPVAQPPAAAPPSTVGSSAA--- 81 P+ P+ + S TS A P + A+P P PPAA PPS G A Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSP 959 Query: 82 --APRQPGLMAQMATTAAGVAVGSAVGHILGHAIT------GGFSGGSNAEPARPDITYQ 133 AP P A + G A S G A T G + P P +T Sbjct: 960 KWAPTPPA--ATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPP 1017 Query: 134 EPQGTQPA 141 P+G+ A Sbjct: 1018 SPKGSPAA 1025 Score = 33.5 bits (75), Expect = 0.11 Identities = 31/112 (27%), Positives = 39/112 (34%), Gaps = 11/112 (9%) Query: 36 PGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATT 95 P T PP+ + P+ AP PPAA PPS G A P + + T Sbjct: 1237 PKGAPTTPAATPPSPKGGPATPPPKGAPT--PPAATPPSLKGGLATPPHKGAPNPAVVTP 1294 Query: 96 AA---GVAVGSAVGHILGHAITGGFSGGS------NAEPARPDITYQEPQGT 138 + G A G A T GS P P +T P+GT Sbjct: 1295 PSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGT 1346 Score = 31.6 bits (70), Expect = 0.40 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Query: 37 GSRSHTSRMAPPASRAPQMRAAPRPAPVAQP---PAAAPPSTVGSSAAAPRQPGLMAQMA 93 G+ S + PPA +P + AP P V P A P+ G+ + P P + Sbjct: 1592 GAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSP 1651 Query: 94 TTAAGV 99 T+ A V Sbjct: 1652 TSPASV 1657 Score = 30.8 bits (68), Expect = 0.69 Identities = 32/109 (29%), Positives = 39/109 (35%), Gaps = 12/109 (11%) Query: 41 HTSRMAPPASRAPQMR---AAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAA 97 H PA+ P + A P P PAA PPS G A P + AT + Sbjct: 1122 HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPS 1181 Query: 98 ---GVAVGSAVGHILGHAIT-----GGFSGGS-NAEPARPDITYQEPQG 137 G+A S G A T GG + S P P T P+G Sbjct: 1182 PKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1230 Score = 28.9 bits (63), Expect = 2.6 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 36 PGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAP 83 P T PP+ + +P+ AP PAA PPS G A P Sbjct: 1214 PKGAPTTPAATPPSPKGGLATPSPKGAPTT--PAATPPSPKGGPATPP 1259 Score = 28.5 bits (62), Expect = 3.4 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Query: 30 RRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPS 74 + P P S+ +S PPA + AP P + PPA PS Sbjct: 1568 KEAPATPSSKEASS---PPAVTPSTYKGAPSPKELLIPPAVTSPS 1609 Score = 28.1 bits (61), Expect = 4.5 Identities = 32/114 (28%), Positives = 40/114 (35%), Gaps = 12/114 (10%) Query: 36 PGSRSHTSRMAPPASRAPQMR---AAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQM 92 P + S PPA+ P + A P PAA PPS G A P + Sbjct: 1094 PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPA 1153 Query: 93 ATTAA---GVAVGSAVGHILGHAIT-----GGFSGGS-NAEPARPDITYQEPQG 137 AT + G+A G A T GG + S P P T P+G Sbjct: 1154 ATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1207 Score = 27.7 bits (60), Expect = 5.8 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 4/82 (4%) Query: 47 PPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVG 106 PPA+ P +P+ +P PP AP + + P L A ++ G S+ Sbjct: 1312 PPAATPP----SPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKE 1367 Query: 107 HILGHAITGGFSGGSNAEPARP 128 A T GG P P Sbjct: 1368 GPTPPAATPSHKGGPAMTPPSP 1389 Score = 27.3 bits (59), Expect = 7.6 Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 3/69 (4%) Query: 36 PGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATT 95 P T PP+ + +P+ AP PAA PPS G A P G A T Sbjct: 1191 PKGAPTTPAATPPSPKGGLATPSPKGAPTT--PAATPPSPKG-GLATPSPKGAPTTPAAT 1247 Query: 96 AAGVAVGSA 104 G A Sbjct: 1248 PPSPKGGPA 1256 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 40.4 bits (93), Expect = 9e-04 Identities = 35/95 (36%), Positives = 40/95 (42%), Gaps = 15/95 (15%) Query: 33 PRIPGSRSHT----SRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGL 88 P PG+ T APPA AP AAP PA PAAAPP + A R PG Sbjct: 231 PAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAA----PAAAPPPPPPAPATLARPPGH 286 Query: 89 MAQMATTAAGVAVGSAVGHILGHAITGGFSGGSNA 123 A T A V +A A GG +G + A Sbjct: 287 PAGPPTAAPAVPPPAA-------AQNGGSAGAAPA 314 Score = 35.8 bits (81), Expect = 0.021 Identities = 33/129 (25%), Positives = 44/129 (34%), Gaps = 15/129 (11%) Query: 31 RVPRIPGSRSHTSRMAPPASRAPQ---MRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPG 87 R P P + PP + A AAP PAP A PA +AAA PG Sbjct: 282 RPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPG 341 Query: 88 LMAQ------------MATTAAGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEP 135 + A+ T AA +A ++G + G + P P P Sbjct: 342 VKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLP 401 Query: 136 QGTQPAQQQ 144 +G A Q Sbjct: 402 KGAAGAVTQ 410 Score = 32.3 bits (72), Expect = 0.24 Identities = 36/125 (28%), Positives = 45/125 (36%), Gaps = 24/125 (19%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAA-----PPSTVGSSAAA 82 P+ P +PPA+ AP AAP AP PPA A P G AA Sbjct: 250 PAPAAP------------SPPAAPAP---AAPAAAPPPPPPAPATLARPPGHPAGPPTAA 294 Query: 83 PRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEP----QGT 138 P P A +AG A A ++G G+ A P + + P Q Sbjct: 295 PAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAA 354 Query: 139 QPAQQ 143 PA Q Sbjct: 355 PPAAQ 359 Score = 30.8 bits (68), Expect = 0.69 Identities = 30/98 (30%), Positives = 36/98 (36%), Gaps = 27/98 (27%) Query: 33 PRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPA--AAPPSTV------------GS 78 P P + S + AP A A P PA +A+PP A PP+ GS Sbjct: 249 PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGS 308 Query: 79 SAAAPR-------------QPGLMAQMATTAAGVAVGS 103 + AAP QPG A A A GV S Sbjct: 309 AGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAES 346 Score = 30.0 bits (66), Expect = 1.2 Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 16/106 (15%) Query: 27 RPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR-PAPVAQPPAAAPPSTVGSSAAAPRQ 85 RP P+ PG PP+ R P + A P PA +PP P + GS A P Sbjct: 96 RPGGGGPQRPG---------PPSPRRPLVPAGPAPPAAKLRPP---PEGSAGSCAPVPAA 143 Query: 86 PGLMAQMATTAAGVAVGSAVGHILGHAITG---GFSGGSNAEPARP 128 + A AG A + + A G G G P +P Sbjct: 144 AAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKP 189 Score = 29.3 bits (64), Expect = 2.0 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Query: 43 SRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATT 95 ++M A PQ APRPA P +APP + S+ AP P + Q+ T Sbjct: 474 AQMQAQAHAQPQTTMAPRPA----TPTSAPPVQI-STVQAPGTPIIARQVTPT 521 Score = 28.1 bits (61), Expect = 4.5 Identities = 16/55 (29%), Positives = 22/55 (40%) Query: 30 RRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPR 84 +RV + + T + PAS A M P PAA PP G+ P+ Sbjct: 348 KRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPK 402 >gi|31377750 YTH domain family, member 1 [Homo sapiens] Length = 559 Score = 40.4 bits (93), Expect = 9e-04 Identities = 22/61 (36%), Positives = 30/61 (49%) Query: 46 APPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAV 105 AP +AP +AAP+P VAQP A PP+ +P+QP +A A G + Sbjct: 283 APVPQQAPSPQAAPQPQQVAQPLPAQPPALAQPQYQSPQQPPQTRWVAPRNRNAAFGQSG 342 Query: 106 G 106 G Sbjct: 343 G 343 >gi|58761548 tau tubulin kinase 1 [Homo sapiens] Length = 1321 Score = 40.0 bits (92), Expect = 0.001 Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 16/114 (14%) Query: 6 LERSKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHT-SRMAPPASRAPQMRAAPRPA-- 62 L +P GR R + R P+ R PR+P S S + A P S++ R +P P+ Sbjct: 1206 LRPKQPPGRGLGPGRAQAGARPPAPRSPRLPASTSAARNASASPRSQSLSRRESPSPSHQ 1265 Query: 63 --PVAQPPAAAPPS--------TVGSSAAAPRQPGLMAQMATT--AAGVAVGSA 104 P PP PP+ + G S PR L AQ ATT AG A G A Sbjct: 1266 ARPGVPPPRGVPPARAQPDGTPSPGGSKKGPRGK-LQAQRATTKGRAGGAEGRA 1318 >gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] Length = 753 Score = 40.0 bits (92), Expect = 0.001 Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 10/105 (9%) Query: 36 PGSRSHTSRMAPPASRAPQMRAAP-----RPAPVAQPPAAAPPSTVGSSAAAPRQPGLMA 90 PG+ + APP++ P+ AP PAP AQ A APP+ G S PR P + Sbjct: 338 PGNNGVPAPAAPPSALGPKASPAPSHNSGTPAPYAQ--AVAPPAPSGPSTTQPRPPSV-- 393 Query: 91 QMATTAAGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEP 135 + G G ++ GG +G N + + P Sbjct: 394 -QPSGGGGGGSGGGGSSSSSNSSAGGGAGKQNGATSYSSVVADSP 437 Score = 27.3 bits (59), Expect = 7.6 Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 10/95 (10%) Query: 49 ASRAPQMRAAPRPAPVAQPPAAAPPSTV--GSSAAAPRQPGLMAQMATTAAGVAVGSAVG 106 +++ PQ A P P PPAA+ ST + AP P +A G A Sbjct: 310 SNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAP-------PSALGPKASPAPS 362 Query: 107 HILGHAITGGFSGGSNAEPARPDITYQEPQGTQPA 141 H G + A P+ P T P QP+ Sbjct: 363 HNSGTPAPYAQAVAPPA-PSGPSTTQPRPPSVQPS 396 >gi|239753493 PREDICTED: hypothetical protein [Homo sapiens] Length = 254 Score = 39.7 bits (91), Expect = 0.001 Identities = 32/78 (41%), Positives = 34/78 (43%), Gaps = 14/78 (17%) Query: 33 PRIPGSRSHTSRMAPPASRAPQMRAAP-----RPAPVAQPPA--------AAPPSTVGSS 79 PR P S+ S P RAP AAP P P Q A A PPS+ S Sbjct: 168 PRAPRSQELRSWAQPAGGRAPGC-AAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSG 226 Query: 80 AAAPRQPGLMAQMATTAA 97 A APR P L Q TTAA Sbjct: 227 AEAPRSPPLRLQRYTTAA 244 Score = 28.5 bits (62), Expect = 3.4 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Query: 24 HVRRPSRRVPRIPGSRSHTSRM---APPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSA 80 H R R R P + SH S + AP A+R P P PAP + PP A Sbjct: 30 HCRGGKERPARPPPASSHESHVLDNAPAAAREP-----PPPAPAPRCLRLRPPFPEEGVA 84 Query: 81 AAP 83 A P Sbjct: 85 ARP 87 >gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo sapiens] Length = 254 Score = 39.7 bits (91), Expect = 0.001 Identities = 32/78 (41%), Positives = 34/78 (43%), Gaps = 14/78 (17%) Query: 33 PRIPGSRSHTSRMAPPASRAPQMRAAP-----RPAPVAQPPA--------AAPPSTVGSS 79 PR P S+ S P RAP AAP P P Q A A PPS+ S Sbjct: 168 PRAPRSQELRSWAQPAGGRAPGC-AAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSG 226 Query: 80 AAAPRQPGLMAQMATTAA 97 A APR P L Q TTAA Sbjct: 227 AEAPRSPPLRLQRYTTAA 244 Score = 28.5 bits (62), Expect = 3.4 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Query: 24 HVRRPSRRVPRIPGSRSHTSRM---APPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSA 80 H R R R P + SH S + AP A+R P P PAP + PP A Sbjct: 30 HCRGGKERPARPPPASSHESHVLDNAPAAAREP-----PPPAPAPRCLRLRPPFPEEGVA 84 Query: 81 AAP 83 A P Sbjct: 85 ARP 87 >gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo sapiens] Length = 254 Score = 39.7 bits (91), Expect = 0.001 Identities = 32/78 (41%), Positives = 34/78 (43%), Gaps = 14/78 (17%) Query: 33 PRIPGSRSHTSRMAPPASRAPQMRAAP-----RPAPVAQPPA--------AAPPSTVGSS 79 PR P S+ S P RAP AAP P P Q A A PPS+ S Sbjct: 168 PRAPRSQELRSWAQPAGGRAPGC-AAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSG 226 Query: 80 AAAPRQPGLMAQMATTAA 97 A APR P L Q TTAA Sbjct: 227 AEAPRSPPLRLQRYTTAA 244 Score = 28.5 bits (62), Expect = 3.4 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Query: 24 HVRRPSRRVPRIPGSRSHTSRM---APPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSA 80 H R R R P + SH S + AP A+R P P PAP + PP A Sbjct: 30 HCRGGKERPARPPPASSHESHVLDNAPAAAREP-----PPPAPAPRCLRLRPPFPEEGVA 84 Query: 81 AAP 83 A P Sbjct: 85 ARP 87 >gi|149158690 HLA-B associated transcript-2 [Homo sapiens] Length = 2157 Score = 39.7 bits (91), Expect = 0.001 Identities = 37/118 (31%), Positives = 46/118 (38%), Gaps = 17/118 (14%) Query: 36 PGSRSHTSRMAPPASRAPQMRAAPR------PAPVAQPPAAAPPSTVGSSAAAPRQPGLM 89 P R APPA AP A P PAP A PPA+AP A P Sbjct: 500 PDKRLKAEPAAPPA--APSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPA-- 555 Query: 90 AQMATTAAGVAVGSAVGHILGHAITGGFSGGS-NAEPARPDITYQEPQGTQPAQQQQP 146 +T GVA + + G T S GS A P P + +E G +P ++ P Sbjct: 556 --QSTPTPGVAAAPTL--VSGGGSTSSTSSGSFEASPVEPQLPSKE--GPEPPEEVPP 607 Score = 32.0 bits (71), Expect = 0.31 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 28 PSRRVPR--IPGSRSHTSRMAPPASRAPQMRAAP-RPAPVAQPPAAAPPS 74 P RR R GS +H S +AP AP + P+A PP APPS Sbjct: 1098 PKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVPLAPPPPGAPPS 1147 >gi|4758392 forkhead box D1 [Homo sapiens] Length = 465 Score = 39.7 bits (91), Expect = 0.001 Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 14/105 (13%) Query: 9 SKPGGRSHLALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPP 68 +K GG AL R P I GS + A A A +A+P P+PVA PP Sbjct: 347 AKAGGPGASAL-----ARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPP 401 Query: 69 A-------AAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVG 106 A A + VG +AA R L+A A A+ V+ +A+G Sbjct: 402 APGSSGGGCAAQAAVGPAAALTR--SLVAAAAAAASSVSSSAALG 444 >gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] Length = 1505 Score = 39.3 bits (90), Expect = 0.002 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 36 PGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQM 92 P S + T+ A P A AAP P A P++APP + SS++APR+P + + Sbjct: 1405 PASATATAAPAAPEDAATSAAAAPGEGPAA--PSSAPPPSNSSSSSAPRRPSSLQSL 1459 >gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] Length = 274 Score = 38.9 bits (89), Expect = 0.003 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 7/80 (8%) Query: 28 PSRRVPRIPG----SRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAP 83 PSR P +PG SRS +SR+ PA + +P P P PP A P +G+ AA Sbjct: 34 PSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPP---PPPPAAPHVLGARVAAG 90 Query: 84 RQPGLMAQMATTAAGVAVGS 103 L A + ++ VG+ Sbjct: 91 PTHRLSASHSRVSSRGPVGT 110 Score = 26.9 bits (58), Expect = 9.9 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 26 RRPSRRVPRIPGS-RSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPR 84 R P P+ PG R +RM A +P+ RAA + + PP PPS S + Sbjct: 105 RGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPP-PPSRARSRSLRLS 163 Query: 85 QPG 87 PG Sbjct: 164 APG 166 >gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo sapiens] Length = 274 Score = 38.9 bits (89), Expect = 0.003 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 7/80 (8%) Query: 28 PSRRVPRIPG----SRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAP 83 PSR P +PG SRS +SR+ PA + +P P P PP A P +G+ AA Sbjct: 34 PSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPP---PPPPAAPHVLGARVAAG 90 Query: 84 RQPGLMAQMATTAAGVAVGS 103 L A + ++ VG+ Sbjct: 91 PTHRLSASHSRVSSRGPVGT 110 Score = 26.9 bits (58), Expect = 9.9 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 26 RRPSRRVPRIPGS-RSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPR 84 R P P+ PG R +RM A +P+ RAA + + PP PPS S + Sbjct: 105 RGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPP-PPSRARSRSLRLS 163 Query: 85 QPG 87 PG Sbjct: 164 APG 166 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 38.5 bits (88), Expect = 0.003 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 4/114 (3%) Query: 33 PRIPGSRSHTSRMAPPASRAPQMRAAPRP--APVAQPPAAAPPSTVGSSAAAPRQPGLMA 90 P P S + APPA +P ++ P P +P+A PP APP AP P Sbjct: 581 PETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASP 640 Query: 91 QMA--TTAAGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQ 142 ++ T + A + H+L + S A + P P T P+Q Sbjct: 641 PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQ 694 Score = 36.2 bits (82), Expect = 0.016 Identities = 20/61 (32%), Positives = 26/61 (42%) Query: 36 PGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATT 95 P S++ S APP P A+P +P A PP APP P P M+ + Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPS 750 Query: 96 A 96 A Sbjct: 751 A 751 Score = 33.5 bits (75), Expect = 0.11 Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 8/109 (7%) Query: 35 IPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQP-GLMAQMA 93 +P + APP+ P M+A P + PP P S S AP P L + A Sbjct: 357 LPSPPATPPSQAPPSMTTPPMQAPPSLQTI--PPIQVPHSLTSPSLQAPPSPLALSSLQA 414 Query: 94 TTAAGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQ 142 TT+ G A L ++ + S P+RP T P + P Q Sbjct: 415 TTSLGSPTLQATHSFL--TMSPRQTQASLTSPSRPAST---PPDSPPLQ 458 Score = 33.1 bits (74), Expect = 0.14 Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 11/92 (11%) Query: 3 LSVLERSKPGGRSHLALRWL----SHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAA 58 LS L P + LA+ L S P + P P + S A P S+AP AA Sbjct: 642 LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA 701 Query: 59 P----RPAPVAQP---PAAAPPSTVGSSAAAP 83 P P+P A P P+A PP AAP Sbjct: 702 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 733 Score = 33.1 bits (74), Expect = 0.14 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPG 87 P +VP P + S A P +AP AAP PPA+ P S S+ PR P Sbjct: 702 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSP--SATPPPRVPP 759 Query: 88 LMA 90 L+A Sbjct: 760 LLA 762 Score = 32.7 bits (73), Expect = 0.18 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 22 LSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMR----AAPRPAPVAQPPAAAPPSTVG 77 LS + PS + P + +PP S Q A+P +P A PP+ APPS Sbjct: 642 LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA 701 Query: 78 SSAAAPRQPGLMAQMATTA 96 P P M+ +A Sbjct: 702 PPLQVPPSPPASPPMSPSA 720 Score = 32.0 bits (71), Expect = 0.31 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPR-----PAPVAQPPAAAPPSTVGSSAAA 82 P +P + + +A P AP +AP P+P A PP+ APPS A Sbjct: 320 PDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQA 379 Query: 83 P 83 P Sbjct: 380 P 380 Score = 31.2 bits (69), Expect = 0.53 Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 23/129 (17%) Query: 37 GSRSHTSRMAPPA---SRAPQMRAA------PRPAPVA--QPPAAAPPSTVGS------- 78 G+R TS P + A + RAA PRPAP A +PP P +V S Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT 218 Query: 79 --SAAAPRQPGLMAQMATTAAGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEPQ 136 S AA R+P + A+ ++ S+ + A +G + G+ PA P + +P+ Sbjct: 219 EPSPAARRRPSAGGGLQRPASR-SLSSSATPLSSPARSGPSARGTPRAPAHP--SQPKPK 275 Query: 137 GTQPAQQQQ 145 G Q + Q Sbjct: 276 GLQALRPPQ 284 Score = 30.8 bits (68), Expect = 0.69 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPG 87 P +VP P + S A P R P + AAP P+ PP +PP+++ S A P Sbjct: 733 PPLQVPPSPPASPPMSPSATPPPRVPPLLAAP---PLQVPP--SPPASLPMSPLAKPPPQ 787 Query: 88 LMAQMAT 94 +AT Sbjct: 788 APPALAT 794 Score = 30.4 bits (67), Expect = 0.90 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 9/83 (10%) Query: 48 PASRAPQMRAA-PRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTAAGVAVGSAVG 106 P S P A P P+P AA + G+S+ +P+Q A++ G S V Sbjct: 981 PESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQ----ARLGELPLGALQASVVQ 1036 Query: 107 HILGH----AITGGFSGGSNAEP 125 H+L A G +GGS P Sbjct: 1037 HLLSRTLLLAAAEGAAGGSGGGP 1059 Score = 30.0 bits (66), Expect = 1.2 Identities = 16/51 (31%), Positives = 19/51 (37%) Query: 46 APPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTA 96 APP P A+P +P A PP PP P P M+ A Sbjct: 732 APPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLA 782 Score = 30.0 bits (66), Expect = 1.2 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAP-PSTVGSSAAAPRQP 86 P +VP P + S +A P +AP A P + PPA+ P + SA+ P P Sbjct: 764 PPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 823 Score = 29.3 bits (64), Expect = 2.0 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 9/110 (8%) Query: 37 GSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGLMAQMATTA 96 G+ + T P P+ +PRP P P A +G++ A R+P +A A Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAAL---RVLGAAGAVGRKP-----LAERA 62 Query: 97 AGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQP 146 G+ G+ + A +G S+ PA + PA+ P Sbjct: 63 GGIG-GATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSP 111 Score = 29.3 bits (64), Expect = 2.0 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMRA--------APRPAPVAQPPAAAPPSTVGSS 79 P + P P + S +A P+ +AP A +P P+P Q P + P S S Sbjct: 628 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 687 Query: 80 AAAP 83 +A P Sbjct: 688 SATP 691 Score = 29.3 bits (64), Expect = 2.0 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 8/62 (12%) Query: 31 RVPRIPGSRSHTSRMAPPASRAPQMRAAP----RPAPVAQPPAAAP--PSTVG--SSAAA 82 + P P + S +A P +AP + AAP P+P A P AP P T G +S + Sbjct: 810 QAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG 869 Query: 83 PR 84 PR Sbjct: 870 PR 871 Score = 27.3 bits (59), Expect = 7.6 Identities = 25/103 (24%), Positives = 36/103 (34%), Gaps = 5/103 (4%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPG 87 PS R P + R PASR+ A P +P P+A + + P+ G Sbjct: 220 PSPAARRRPSAGGGLQR---PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG 276 Query: 88 LMA--QMATTAAGVAVGSAVGHILGHAITGGFSGGSNAEPARP 128 L A T A+G + + G+ A P P Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPP 319 Score = 26.9 bits (58), Expect = 9.9 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Query: 1 MKLSVLERSKPGGRSHLALRWLSHVRRPSRRVP-RIPGSRSHTSRMAPPASRAPQMRAAP 59 + +S L + P LA L + P P + P S S + M+P A+ PQ A P Sbjct: 776 LPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ--APP 833 Query: 60 -RPAPVAQPPAAAPPSTVGSSAAAPRQPG 87 AP+ Q P + P S + P PG Sbjct: 834 VLAAPLLQVPPSPPASPTLQAPRRPPTPG 862 >gi|22748651 ORAI calcium release-activated calcium modulator 3 [Homo sapiens] Length = 295 Score = 38.5 bits (88), Expect = 0.003 Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 6/77 (7%) Query: 28 PSRRVP--RIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQ 85 P+ VP R+PG+ + + PAS P R++ AP PA P G A Sbjct: 184 PTPMVPTSRVPGTLAPVATSLSPASNLP--RSSASAAPSQAEPACPPRQACGGGGA--HG 239 Query: 86 PGLMAQMATTAAGVAVG 102 PG A MA+TA V VG Sbjct: 240 PGWQAAMASTAIMVPVG 256 >gi|223972704 hypothetical protein LOC284418 [Homo sapiens] Length = 922 Score = 38.1 bits (87), Expect = 0.004 Identities = 22/77 (28%), Positives = 32/77 (41%) Query: 29 SRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQPGL 88 S+++P +P S P +AP A PR AP P+ P+ S AP P Sbjct: 419 SQKLPAVPASSWKPPPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPAP 478 Query: 89 MAQMATTAAGVAVGSAV 105 + + +A SAV Sbjct: 479 SRKASAASASPRKASAV 495 Score = 32.3 bits (72), Expect = 0.24 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 9/71 (12%) Query: 25 VRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPA-PVAQPPAAAPP--------ST 75 V PS++ P +P + P+ +A A+PR A V PP PP T Sbjct: 455 VPAPSQKAPAVPAPSQKAPAIPAPSRKASAASASPRKASAVPAPPQKTPPPSQKAPSVPT 514 Query: 76 VGSSAAAPRQP 86 + A +P P Sbjct: 515 IPQKAVSPTAP 525 Score = 29.3 bits (64), Expect = 2.0 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 5/58 (8%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQ 85 P R+ P +P PA AP +A PAP + AA+ S+ AP Q Sbjct: 448 PPRKAPAVPAPSQKA-----PAVPAPSQKAPAIPAPSRKASAASASPRKASAVPAPPQ 500 >gi|4505101 microtubule-associated protein 7 [Homo sapiens] Length = 749 Score = 38.1 bits (87), Expect = 0.004 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 31 RVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPP-AAAPPSTVGSSAAAPRQPG 87 R P P MAP + AP +AP PAPV P +AP STV +SA+ G Sbjct: 415 RTPAEPEVGPAAPAMAPAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAG 472 Score = 26.9 bits (58), Expect = 9.9 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 17/94 (18%) Query: 28 PSRRVPRIPGSRSHTSRMAPPASRAPQMRAAP------RPA-------PVAQPPAAAPPS 74 PS+ +P +PG+ TS + P + +A + P RP P + P P Sbjct: 332 PSKSLPHLPGTPRPTSSLPPGSVKAAPAQVRPPSPGNIRPVKREVKVEPEKKDPEKEPQK 391 Query: 75 TVGSSAAAPRQPGLMAQMAT----TAAGVAVGSA 104 + R P + + AT T A VG A Sbjct: 392 VANEPSLKGRAPLVKVEEATVEERTPAEPEVGPA 425 >gi|169209217 PREDICTED: similar to hCG2042704 [Homo sapiens] Length = 511 Score = 37.7 bits (86), Expect = 0.006 Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 27 RPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVGSSAAAPRQP 86 RP+R V R G +H PP SR +APRP P A P + +PP V +AA Q Sbjct: 28 RPARAVRR-GGHPAHFCWSRPPVSRERDDPSAPRPVP-ALPSSPSPPPPVRRPSAAREQQ 85 Query: 87 G 87 G Sbjct: 86 G 86 >gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] Length = 292 Score = 37.4 bits (85), Expect = 0.007 Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 27 RPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAP----PSTVGSSAAA 82 RPS G R ++APP R R P PP P P GSS A Sbjct: 6 RPSAGAGAGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLA 65 Query: 83 PRQPGLMAQMATTAAGVAVGSAVGHIL--GHAITGGFSGGSNAEPARPDITYQEP 135 +P +A G+ V +A +L G TG + P R D P Sbjct: 66 TPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVP 120 Score = 28.9 bits (63), Expect = 2.6 Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 19/120 (15%) Query: 17 LALRWLSHVRRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTV 76 ++LRW S R +R PG P A +A M P AP QPP+ Sbjct: 124 ISLRWRSG--REAR-----PGGPQAGRAGDPKADQA--MHLQPAWAPKLQPPSVCRQQPP 174 Query: 77 GSSAAAPRQPGLMAQ-MATTAAGVAVGSAVGHILGHAITGGFSGGSNAEPARPDITYQEP 135 G+S A P P L + G A SA+ + GG N A + ++P Sbjct: 175 GNSRARPHSPHLGTRARCPCGCGEARRSALQQL---------HGGGNRPSAPSRVAVEDP 225 >gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo sapiens] Length = 202 Score = 37.4 bits (85), Expect = 0.007 Identities = 32/83 (38%), Positives = 37/83 (44%), Gaps = 15/83 (18%) Query: 26 RRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVG----SSAA 81 RRP + R G+ H S APPA+ PA AQPPA P S + S Sbjct: 103 RRPGKPPRRPKGAAGHPS--APPAAA---------PAAPAQPPAPRPESQLSDRPQSWEQ 151 Query: 82 APRQPGLMAQMATTAAGVAVGSA 104 PR PG A+ A AA A G A Sbjct: 152 KPRGPGRSARSAGAAAPPAGGLA 174 >gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo sapiens] Length = 202 Score = 37.4 bits (85), Expect = 0.007 Identities = 32/83 (38%), Positives = 37/83 (44%), Gaps = 15/83 (18%) Query: 26 RRPSRRVPRIPGSRSHTSRMAPPASRAPQMRAAPRPAPVAQPPAAAPPSTVG----SSAA 81 RRP + R G+ H S APPA+ PA AQPPA P S + S Sbjct: 103 RRPGKPPRRPKGAAGHPS--APPAAA---------PAAPAQPPAPRPESQLSDRPQSWEQ 151 Query: 82 APRQPGLMAQMATTAAGVAVGSA 104 PR PG A+ A AA A G A Sbjct: 152 KPRGPGRSARSAGAAAPPAGGLA 174 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.130 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,923,124 Number of Sequences: 37866 Number of extensions: 500861 Number of successful extensions: 10465 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 425 Number of HSP's successfully gapped in prelim test: 771 Number of HSP's that attempted gapping in prelim test: 6433 Number of HSP's gapped (non-prelim): 3802 length of query: 184 length of database: 18,247,518 effective HSP length: 96 effective length of query: 88 effective length of database: 14,612,382 effective search space: 1285889616 effective search space used: 1285889616 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.