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Search of human proteins with 239747143
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo
sapiens]
(319 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo ... 659 0.0
gi|45580709 unc-93 homolog B1 [Homo sapiens] 438 e-123
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 390 e-109
gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 384 e-107
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 345 4e-95
gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens] 59 4e-09
gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens] 59 4e-09
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 47 2e-05
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 46 4e-05
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 46 4e-05
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 46 4e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 7e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 45 9e-05
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 45 1e-04
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 45 1e-04
gi|30039694 zinc finger protein 598 [Homo sapiens] 44 1e-04
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 44 1e-04
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote... 44 2e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 43 3e-04
gi|55741677 SET domain containing 1A [Homo sapiens] 43 4e-04
gi|11386183 WAS protein family, member 2 [Homo sapiens] 42 6e-04
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 42 6e-04
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 42 7e-04
gi|160707881 formin 2 [Homo sapiens] 42 0.001
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 42 0.001
gi|5729790 CCCTC-binding factor [Homo sapiens] 41 0.001
gi|93141049 collagen, type XII, alpha 1 short isoform precursor ... 41 0.001
gi|93141047 collagen, type XII, alpha 1 long isoform precursor [... 41 0.001
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 41 0.002
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 41 0.002
>gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo
sapiens]
Length = 319
Score = 659 bits (1701), Expect = 0.0
Identities = 319/319 (100%), Positives = 319/319 (100%)
Query: 1 MNQGYGVCSVGLEWLAYLLVPYSLGASATSLLGLLGLWLPRPVPLVAGAGVHLLLTFILF 60
MNQGYGVCSVGLEWLAYLLVPYSLGASATSLLGLLGLWLPRPVPLVAGAGVHLLLTFILF
Sbjct: 1 MNQGYGVCSVGLEWLAYLLVPYSLGASATSLLGLLGLWLPRPVPLVAGAGVHLLLTFILF 60
Query: 61 FWAPVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAV 120
FWAPVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAV
Sbjct: 61 FWAPVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAV 120
Query: 121 AIFTVYLGSSLHMKAKLALLLVTLVAATVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYR 180
AIFTVYLGSSLHMKAKLALLLVTLVAATVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYR
Sbjct: 121 AIFTVYLGSSLHMKAKLALLLVTLVAATVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYR 180
Query: 181 YLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSE 240
YLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSE
Sbjct: 181 YLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSE 240
Query: 241 GPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPP 300
GPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPP
Sbjct: 241 GPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPP 300
Query: 301 RRSGALGTPRPSTGVRKYS 319
RRSGALGTPRPSTGVRKYS
Sbjct: 301 RRSGALGTPRPSTGVRKYS 319
>gi|45580709 unc-93 homolog B1 [Homo sapiens]
Length = 597
Score = 438 bits (1127), Expect = e-123
Identities = 218/232 (93%), Positives = 221/232 (95%), Gaps = 2/232 (0%)
Query: 4 GYGVCSVGLEWLAYLLVPYSLGASATSLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWA 63
GYGVCSVGLE LAYLLV YSLGASA SLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWA
Sbjct: 364 GYGVCSVGLERLAYLLVAYSLGASAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWA 423
Query: 64 PVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIF 123
PVPRVLQHSWILYVAAALW VGS+LNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIF
Sbjct: 424 PVPRVLQHSWILYVAAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIF 483
Query: 124 TVYLGSSLHMKAKLALLLVTLVAATVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLE 183
TVYLGSSLHMKAKLA+LLVTLVAA VSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLE
Sbjct: 484 TVYLGSSLHMKAKLAVLLVTLVAAAVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLE 543
Query: 184 EDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMG 235
EDNSDESDAEG+ GDG AE EAPPAGPRPGPEPAGLGRRPCPYEQAQG G
Sbjct: 544 EDNSDESDAEGEHGDG--AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDG 593
>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 529
Score = 390 bits (1003), Expect = e-109
Identities = 213/294 (72%), Positives = 222/294 (75%), Gaps = 19/294 (6%)
Query: 22 YSLGASATSLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILYVAAAL 81
YSLG SA SLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWIL VAAAL
Sbjct: 3 YSLGTSAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILCVAAAL 62
Query: 82 WVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLALLL 141
W VGS+LN TGLSTLLGILY+DKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLA+LL
Sbjct: 63 WGVGSALNNTGLSTLLGILYKDKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAMLL 122
Query: 142 VTLVAATVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEE 201
VTLVAA VSYLRMEQKLRRGVAP QPRIPRPQHKVRGYRYL EDNS+ESDAE + GDG
Sbjct: 123 VTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKVRGYRYL-EDNSEESDAEDEHGDG-- 179
Query: 202 AEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLG 261
AE EAPPAGPRPGPEPAGLGRRPCPYEQAQ G G P A +
Sbjct: 180 AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQRGDGPEEHPLQGGVEPWEPLGQAQGFE--N 237
Query: 262 RGDPLRV------------PRCLQRPLSPLPHVGDAP-PRAW-VTSGLPQPPPR 301
+ LR C PL LP VG P PR + + PQ PPR
Sbjct: 238 TAETLRALSTRPSAGAGSGSSCDPAPLQILPAVGRGPGPRVTALCTSYPQGPPR 291
>gi|239755577 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 312
Score = 384 bits (985), Expect = e-107
Identities = 193/214 (90%), Positives = 198/214 (92%), Gaps = 3/214 (1%)
Query: 22 YSLGASATSLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILYVAAAL 81
YSLG SA SLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWIL VAAAL
Sbjct: 3 YSLGTSAASLLGLLGLWLPRPVPLVAGAGVHLLLTFILFFWAPVPRVLQHSWILCVAAAL 62
Query: 82 WVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLALLL 141
W VGS+LN TGLSTLLGILY+DKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLA+LL
Sbjct: 63 WGVGSALNNTGLSTLLGILYKDKERQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAMLL 122
Query: 142 VTLVAATVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEE 201
VTLVAA VSYLRMEQKLRRGVAP QPRIPRPQHKVRGYRYL EDNS+ESDAE + GDG
Sbjct: 123 VTLVAAAVSYLRMEQKLRRGVAPPQPRIPRPQHKVRGYRYL-EDNSEESDAEDEHGDG-- 179
Query: 202 AEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMG 235
AE EAPPAGPRPGPEPAGLGRRPCPYEQAQ G
Sbjct: 180 AEEEAPPAGPRPGPEPAGLGRRPCPYEQAQRGDG 213
>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 503
Score = 345 bits (884), Expect = 4e-95
Identities = 190/270 (70%), Positives = 199/270 (73%), Gaps = 19/270 (7%)
Query: 46 VAGAGVHLLLTFILFFWAPVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKE 105
+AGAGVHLLLTFILFFWAPVPRVLQH WIL VAAALW VGS+LN TGLSTLLGILYEDKE
Sbjct: 1 MAGAGVHLLLTFILFFWAPVPRVLQHIWILCVAAALWGVGSALNNTGLSTLLGILYEDKE 60
Query: 106 RQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLALLLVTLVAATVSYLRMEQKLRRGVAPR 165
RQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLA+LLVTLVAA VSYLRMEQKLRRGVAP
Sbjct: 61 RQDFIFTIYHWWQAVAIFTVYLGSSLHMKAKLAMLLVTLVAAAVSYLRMEQKLRRGVAPP 120
Query: 166 QPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPC 225
QPRIPRPQHKVRGYRYL EDNS+ESDAE + GDG AE EAPPAGPRPGPEPAGLGRRPC
Sbjct: 121 QPRIPRPQHKVRGYRYL-EDNSEESDAEDEHGDG--AEEEAPPAGPRPGPEPAGLGRRPC 177
Query: 226 PYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRV------------PRCLQ 273
PYEQAQ G G P A + + LR C
Sbjct: 178 PYEQAQRGDGPEEHPLQGGVEPWEPLGQAQGFE--NTAETLRALSTRPSAGAGSGSSCDP 235
Query: 274 RPLSPLPHVGDAP-PRAW-VTSGLPQPPPR 301
PL LP VG P PR + + PQ PPR
Sbjct: 236 APLQILPAVGRGPGPRVTALCTSYPQGPPR 265
>gi|29336077 unc-93 homolog A isoform 1 [Homo sapiens]
Length = 457
Score = 59.3 bits (142), Expect = 4e-09
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 3 QGYGVCSVGLEWLAYLLVPYSLGASATSLL-GLLGLWLPRPVPLVAGAGVHLLLTFILFF 61
+ Y C++G++++ Y+++ +S + S+L G + + R V V GA H+ L
Sbjct: 280 RSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLL 339
Query: 62 WAPVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVA 121
W P H + +V + LW V ++ +T + L G+L+E + ++ F Y W+A+
Sbjct: 340 WRPRA---DHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSKEAAFANYRLWEALG 394
Query: 122 IFTVYLGSSLHM--KAKLALLLVTLVAATVSY 151
F + G S+ + KL +LL L V+Y
Sbjct: 395 -FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 425
>gi|221139828 unc-93 homolog A isoform 2 [Homo sapiens]
Length = 415
Score = 59.3 bits (142), Expect = 4e-09
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 3 QGYGVCSVGLEWLAYLLVPYSLGASATSLL-GLLGLWLPRPVPLVAGAGVHLLLTFILFF 61
+ Y C++G++++ Y+++ +S + S+L G + + R V V GA H+ L
Sbjct: 238 RSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLL 297
Query: 62 WAPVPRVLQHSWILYVAAALWVVGSSLNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVA 121
W P H + +V + LW V ++ +T + L G+L+E + ++ F Y W+A+
Sbjct: 298 WRPRA---DHLAVFFVFSGLWGVADAVWQTQNNALYGVLFE--KSKEAAFANYRLWEALG 352
Query: 122 IFTVYLGSSLHM--KAKLALLLVTLVAATVSY 151
F + G S+ + KL +LL L V+Y
Sbjct: 353 -FVIAFGYSMFLCVHVKLYILLGVLSLTMVAY 383
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 47.4 bits (111), Expect = 2e-05
Identities = 40/118 (33%), Positives = 44/118 (37%), Gaps = 19/118 (16%)
Query: 194 GDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSP 253
G G G + PP P PGP P G+ R P+ G G G GP PP P
Sbjct: 325 GPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGP---PPLMP 381
Query: 254 ASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRP 311
Y G P P QR PLP PPR P+PP G L P P
Sbjct: 382 PHGY----TGPPRPPPYGYQR--GPLP-----PPRP-----TPRPPVPPRGPLRGPLP 423
Score = 36.6 bits (83), Expect = 0.030
Identities = 48/168 (28%), Positives = 66/168 (39%), Gaps = 26/168 (15%)
Query: 161 GVAPRQPRIPRPQH--KVRGYRYLEEDNSDESDAEGDLGDGE---------EAEAEAPPA 209
GV + P+I R +GY ++ + D SDA + +G+ +
Sbjct: 124 GVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
Query: 210 GPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVP 269
G R G L P QA + ++ PP PPS+P V LG G P P
Sbjct: 184 GERHGSAAERLLAAQNPLSQADRPH-QLFADAPP-----PPSAPNPVVSSLGSGLP---P 234
Query: 270 RCLQRPLS---PLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTG 314
+ P S P+P G PP + +P PPP GA G PS G
Sbjct: 235 PGMPPPGSFPPPVPPPGALPPG--IPPAMP-PPPMPPGAAGHGPPSAG 279
Score = 28.9 bits (63), Expect = 6.3
Identities = 32/108 (29%), Positives = 36/108 (33%), Gaps = 8/108 (7%)
Query: 207 PPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPA---SVYHVLGRG 263
PP P PG P G+ P GA G GPP T P S H G
Sbjct: 244 PPPVPPPGALPPGIPPAMPPPPMPPGAAG----HGPPSAGTPGAGHPGHGHSHPHPFPPG 299
Query: 264 DPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRP 311
+ P Q L+ G P A QPPPR + P P
Sbjct: 300 G-MPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGP 346
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 46.2 bits (108), Expect = 4e-05
Identities = 48/168 (28%), Positives = 63/168 (37%), Gaps = 24/168 (14%)
Query: 145 VAATVSYLRMEQKLRRGVAPRQPRIPRP--QHKVRGYRYLEEDNSDESDAEGDLGDGEEA 202
V +++L + + G+A P +P +V G L N + GDL G+
Sbjct: 75 VRPLLTFLPLNAQENHGLAVPTPSVPDDFADKEVTGTSSLVNGNLRLYSSVGDLRPGQYG 134
Query: 203 E---AEAPPAGPRPGP-----EPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPA 254
+ PP GP PGP EP G P P A E PP P PP P
Sbjct: 135 QDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAP-PPPPLLLEPPPPPSMAPPPPPV 193
Query: 255 SVYHVLGRGDPLRVPRCLQRPLSPLP--HVGDAPPRAWVTSGLPQPPP 300
+ L P L P P P + APP A++ P PPP
Sbjct: 194 L--------EALSPPHTLSSPSIPTPPDFIPPAPPLAFLA---PPPPP 230
Score = 30.4 bits (67), Expect = 2.2
Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 49/156 (31%)
Query: 163 APRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGR 222
AP + +P P +R + D + E D G+L PA PR G
Sbjct: 334 APSRLPLP-PSFHIRPASQVYPDRAPEPDCPGEL-------KATAPASPRLG-------- 377
Query: 223 RPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHV 282
Q+Q R+ PP P PP+ P L P PLP
Sbjct: 378 ------QSQSQADERAGTPPPAPPLPPPAPP------------------LPPPAPPLPPA 413
Query: 283 GDAPP------RAWVTSGLPQPPPRRSGALGTPRPS 312
APP A +G + P S AL P+P+
Sbjct: 414 --APPLPCAQKAAHPPAGFTKTPKSSSPAL-KPKPN 446
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 46.2 bits (108), Expect = 4e-05
Identities = 48/168 (28%), Positives = 63/168 (37%), Gaps = 24/168 (14%)
Query: 145 VAATVSYLRMEQKLRRGVAPRQPRIPRP--QHKVRGYRYLEEDNSDESDAEGDLGDGEEA 202
V +++L + + G+A P +P +V G L N + GDL G+
Sbjct: 75 VRPLLTFLPLNAQENHGLAVPTPSVPDDFADKEVTGTSSLVNGNLRLYSSVGDLRPGQYG 134
Query: 203 E---AEAPPAGPRPGP-----EPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPA 254
+ PP GP PGP EP G P P A E PP P PP P
Sbjct: 135 QDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAP-PPPPLLLEPPPPPSMAPPPPPV 193
Query: 255 SVYHVLGRGDPLRVPRCLQRPLSPLP--HVGDAPPRAWVTSGLPQPPP 300
+ L P L P P P + APP A++ P PPP
Sbjct: 194 L--------EALSPPHTLSSPSIPTPPDFIPPAPPLAFLA---PPPPP 230
Score = 30.4 bits (67), Expect = 2.2
Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 49/156 (31%)
Query: 163 APRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGR 222
AP + +P P +R + D + E D G+L PA PR G
Sbjct: 334 APSRLPLP-PSFHIRPASQVYPDRAPEPDCPGEL-------KATAPASPRLG-------- 377
Query: 223 RPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHV 282
Q+Q R+ PP P PP+ P L P PLP
Sbjct: 378 ------QSQSQADERAGTPPPAPPLPPPAPP------------------LPPPAPPLPPA 413
Query: 283 GDAPP------RAWVTSGLPQPPPRRSGALGTPRPS 312
APP A +G + P S AL P+P+
Sbjct: 414 --APPLPCAQKAAHPPAGFTKTPKSSSPAL-KPKPN 446
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 46.2 bits (108), Expect = 4e-05
Identities = 48/168 (28%), Positives = 63/168 (37%), Gaps = 24/168 (14%)
Query: 145 VAATVSYLRMEQKLRRGVAPRQPRIPRP--QHKVRGYRYLEEDNSDESDAEGDLGDGEEA 202
V +++L + + G+A P +P +V G L N + GDL G+
Sbjct: 75 VRPLLTFLPLNAQENHGLAVPTPSVPDDFADKEVTGTSSLVNGNLRLYSSVGDLRPGQYG 134
Query: 203 E---AEAPPAGPRPGP-----EPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPA 254
+ PP GP PGP EP G P P A E PP P PP P
Sbjct: 135 QDLLIPPPPPGPAPGPPQDISEPPGGSPLPSPPSTAP-PPPPLLLEPPPPPSMAPPPPPV 193
Query: 255 SVYHVLGRGDPLRVPRCLQRPLSPLP--HVGDAPPRAWVTSGLPQPPP 300
+ L P L P P P + APP A++ P PPP
Sbjct: 194 L--------EALSPPHTLSSPSIPTPPDFIPPAPPLAFLA---PPPPP 230
Score = 30.4 bits (67), Expect = 2.2
Identities = 40/156 (25%), Positives = 53/156 (33%), Gaps = 49/156 (31%)
Query: 163 APRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGR 222
AP + +P P +R + D + E D G+L PA PR G
Sbjct: 334 APSRLPLP-PSFHIRPASQVYPDRAPEPDCPGEL-------KATAPASPRLG-------- 377
Query: 223 RPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHV 282
Q+Q R+ PP P PP+ P L P PLP
Sbjct: 378 ------QSQSQADERAGTPPPAPPLPPPAPP------------------LPPPAPPLPPA 413
Query: 283 GDAPP------RAWVTSGLPQPPPRRSGALGTPRPS 312
APP A +G + P S AL P+P+
Sbjct: 414 --APPLPCAQKAAHPPAGFTKTPKSSSPAL-KPKPN 446
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 45.4 bits (106), Expect = 7e-05
Identities = 35/104 (33%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 206 APPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDP 265
+PPA P P P QA + + PP P PP SP++ P
Sbjct: 709 SPPASPPMSPSAT-------PPPQAPPPLAAPPLQVPPSPPASPPMSPSAT-------PP 754
Query: 266 LRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTP 309
RVP L P PL V +PP + S L +PPP+ AL TP
Sbjct: 755 PRVPPLLAAP--PL-QVPPSPPASLPMSPLAKPPPQAPPALATP 795
Score = 31.6 bits (70), Expect = 0.98
Identities = 25/91 (27%), Positives = 31/91 (34%), Gaps = 10/91 (10%)
Query: 209 AGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRV 268
+ P P P+G RP P + P P T PPS P + L P
Sbjct: 301 SSPLATPSPSGTKARPVPPPD---------NAATPLPATLPPSPPLATPLPLAPPSPSAP 351
Query: 269 PRCLQRPLSPLPHVGDAPPRAWVTSGLPQPP 299
P P P APP + T + PP
Sbjct: 352 PSLQTLPSPPATPPSQAPP-SMTTPPMQAPP 381
Score = 29.6 bits (65), Expect = 3.7
Identities = 38/111 (34%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 207 PPAGPRPGPEPAGLGRRPCPYEQAQGAMGRR---SSEGPPGPRTQPPSSPASVYHVLGRG 263
PP PRP P R A GA+GR+ G G T P S+P R
Sbjct: 29 PPGSPRPPPPVTPAALRVL---GAAGAVGRKPLAERAGGIGGATIPESAP--------RA 77
Query: 264 DPLRVPRCLQR-PLS--PLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRP 311
P R R P S P G+ P A TS P P R A GT RP
Sbjct: 78 GPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGR--ASGTTRP 126
Score = 29.3 bits (64), Expect = 4.9
Identities = 26/95 (27%), Positives = 33/95 (34%), Gaps = 17/95 (17%)
Query: 224 PCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVG 283
PCP + + E P T PP +P + L P P PL +
Sbjct: 566 PCPLQAPPSPLTTPPPETPSSIATPPPQAPPA----------LASPPLQGLPSPPLSPLA 615
Query: 284 DAPPRAWVTSGLP--QPPPRRSGA-----LGTPRP 311
PP+A LP Q PP + L TP P
Sbjct: 616 TPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSP 650
Score = 28.9 bits (63), Expect = 6.3
Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 11/95 (11%)
Query: 205 EAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGD 264
+APP+ P P P P QA A+ +G P P P ++P
Sbjct: 570 QAPPS-PLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATP----------P 618
Query: 265 PLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPP 299
P P PL P +PP + + + PQ P
Sbjct: 619 PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAP 653
Score = 28.9 bits (63), Expect = 6.3
Identities = 42/158 (26%), Positives = 52/158 (32%), Gaps = 11/158 (6%)
Query: 157 KLRRGVAPRQPRIPR--PQHKVRGYRYLEEDNSDESDAEG----DLGDGEEAEAEAPPAG 210
+L +AP P P P + G +S S E D G A A PP
Sbjct: 871 RLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDA 930
Query: 211 PRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSP--ASVYHVLGRGDPLRV 268
PA R P P +GA G + P P T P S+ ++Y G
Sbjct: 931 ELAACHPAAWSRGPAPPLAFRGAPG---APLPWPPATGPGSADGLCTIYETEGPESATPA 987
Query: 269 PRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGAL 306
P L SP G A A + P R G L
Sbjct: 988 PGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGEL 1025
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 45.1 bits (105), Expect = 9e-05
Identities = 45/139 (32%), Positives = 52/139 (37%), Gaps = 25/139 (17%)
Query: 202 AEAEAPPAGPRPGPEPAGL-----GRRPCPYEQAQGAMGRRSSEGP--PGPRTQ------ 248
A A APP P P P PA + R P A A S GP PGPR Q
Sbjct: 122 AAAAAPPPTPAPPPPPAPVAAAAPARAP---RAAAAAATAPPSPGPAQPGPRAQRAAPLA 178
Query: 249 -PPSSPASVYHVLGRGDPLRVP----RCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPR-- 301
PP +PA+ V P R P + PL P P P + PQPPP
Sbjct: 179 APPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGG 238
Query: 302 --RSGALGTPRPSTGVRKY 318
R+G P V +Y
Sbjct: 239 AVRAGGAARPVSLREVVRY 257
Score = 36.2 bits (82), Expect = 0.040
Identities = 30/92 (32%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 211 PRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPR 270
PR G P P P +GA ++ PP P PP PA V P R PR
Sbjct: 102 PRRGATP------PAPPRAPRGAPAAAAAAAPP-PTPAPPPPPAPV----AAAAPARAPR 150
Query: 271 CLQRPLSPLPHVGDAP--PRAWVTSGLPQPPP 300
+ P G A PRA + L PPP
Sbjct: 151 AAAAAATAPPSPGPAQPGPRAQRAAPLAAPPP 182
Score = 30.4 bits (67), Expect = 2.2
Identities = 23/88 (26%), Positives = 28/88 (31%), Gaps = 17/88 (19%)
Query: 227 YEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAP 286
Y A R PP P P +PA+ +P P P
Sbjct: 93 YRNAARVQPPRRGATPPAPPRAPRGAPAAA-----------------AAAAPPPTPAPPP 135
Query: 287 PRAWVTSGLPQPPPRRSGALGTPRPSTG 314
P A V + P PR + A T PS G
Sbjct: 136 PPAPVAAAAPARAPRAAAAAATAPPSPG 163
Score = 30.4 bits (67), Expect = 2.2
Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 15/67 (22%)
Query: 194 GDLGDGEEAEAEAPPAGPRPGP-------EPAGLGRRPCPYEQAQGAMGRRSSEGPPGPR 246
G G A+ AP A P P P PAG R P P A+ R PP P
Sbjct: 163 GPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPP------AVAAREPPLPPPP- 215
Query: 247 TQPPSSP 253
QPP+ P
Sbjct: 216 -QPPAPP 221
Score = 30.0 bits (66), Expect = 2.8
Identities = 37/135 (27%), Positives = 50/135 (37%), Gaps = 28/135 (20%)
Query: 183 EEDNSDESDAEGDLGDGEEAEAEAPPAGPR-------PGPEPAGLGRRPCPYEQAQGAMG 235
EED+ ++ D E D+ +G E PAG + GP+ A R + G
Sbjct: 331 EEDDDEDEDEEDDVSEGSEVPESDRPAGAQHHQLNGERGPQSA--KERVKEWTPCGPHQG 388
Query: 236 RRSSEGP-PGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSG 294
+ GP PG T+ S A++ G P P SP+P
Sbjct: 389 QDEGRGPAPGSGTRQVFSMAAMNKEGGTASVATGP---DSP-SPVP-------------- 430
Query: 295 LPQPPPRRSGALGTP 309
LP P GA GTP
Sbjct: 431 LPPGKPALPGADGTP 445
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 44.7 bits (104), Expect = 1e-04
Identities = 43/140 (30%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 182 LEEDNSDESD--AEGDLGDGEE---AEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGR 236
L+ED S E D GD E+ E + PP G + AG G + +Q G
Sbjct: 19 LDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGG 78
Query: 237 RSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVG-DAPPRAWVTSGL 295
+ +GPP P+ +P P H P RP P G PPR G
Sbjct: 79 QQQQGPPPPQGKPQGPPQQGGH---------PPPPQGRPQGPPQQGGHPRPPR-----GR 124
Query: 296 PQPPPRRSG-ALGTPRPSTG 314
PQ PP++ G G P P G
Sbjct: 125 PQGPPQQGGHQQGPPPPPPG 144
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 44.7 bits (104), Expect = 1e-04
Identities = 43/140 (30%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 182 LEEDNSDESD--AEGDLGDGEE---AEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGR 236
L+ED S E D GD E+ E + PP G + AG G + +Q G
Sbjct: 19 LDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGG 78
Query: 237 RSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVG-DAPPRAWVTSGL 295
+ +GPP P+ +P P H P RP P G PPR G
Sbjct: 79 QQQQGPPPPQGKPQGPPQQGGH---------PPPPQGRPQGPPQQGGHPRPPR-----GR 124
Query: 296 PQPPPRRSG-ALGTPRPSTG 314
PQ PP++ G G P P G
Sbjct: 125 PQGPPQQGGHQQGPPPPPPG 144
>gi|30039694 zinc finger protein 598 [Homo sapiens]
Length = 904
Score = 44.3 bits (103), Expect = 1e-04
Identities = 49/175 (28%), Positives = 68/175 (38%), Gaps = 31/175 (17%)
Query: 143 TLVAATVSYLRMEQKLRRGVAPRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEA 202
TL A++ ++ +K + G +P+P L+ + S AEG +
Sbjct: 576 TLGLASIQPSKVGKKKKVGSEKPGTTLPQPPPATCPPGALQAPEAPASRAEGPVAVVVNG 635
Query: 203 EAEAPPAGPRPGPEPAGL----GRRPCPYEQAQ-GAMGRRSSEGPPGPRTQPPSSPASVY 257
E P EP GL G PCP Q A+G GP PR PP ++V
Sbjct: 636 HTEGPAPARSAPKEPPGLPRPLGSFPCPTPQEDFPALG-----GPCPPRMPPPPGFSAV- 689
Query: 258 HVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPS 312
VL +G P P P G PP + +PPP SG L +P P+
Sbjct: 690 -VLLKGTP------------PPPPPGLVPP-------ISKPPPGFSGLLPSPHPA 724
Score = 32.3 bits (72), Expect = 0.57
Identities = 47/181 (25%), Positives = 59/181 (32%), Gaps = 44/181 (24%)
Query: 183 EEDNSDESDAEGDLGDGEEAEAEAP--PAGPRPGPEPAGLGRRP------CPYEQ----- 229
EE E EG EEA A P P GPR P G G P P Q
Sbjct: 359 EEARRSEDQEEGGRPKKEEAAARGPEDPRGPRRSPRTQGEGPGPKETSTNGPVSQEAFSV 418
Query: 230 ----AQGAMGRRSSEGPPGPR---------------------TQPPSSPASVYHVLGRGD 264
A G +G + PP P+ T P A Y + RG
Sbjct: 419 TGPAAPGCVGVPGALPPPSPKLKDEDFPSLSASTSSSCSTAATPGPVGLALPYAIPARGR 478
Query: 265 PLRVPRCLQRPLSPLPHVGDAPP---RAWVTSGLPQ---PPPRRSGALGTPRPSTGVRKY 318
+S +P G AP AW +S + PP + A G+ +P+ K
Sbjct: 479 SAFQEEDFPALVSSVPKPGTAPTSLVSAWNSSSSSKKVAQPPLSAQATGSGQPTRKAGKG 538
Query: 319 S 319
S
Sbjct: 539 S 539
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 44.3 bits (103), Expect = 1e-04
Identities = 43/140 (30%), Positives = 54/140 (38%), Gaps = 21/140 (15%)
Query: 182 LEEDNSDESD--AEGDLGDGEE---AEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGR 236
L ED S E D GD E+ E + PP G + AG G + +Q G
Sbjct: 19 LNEDVSQEDVPLVISDGGDSEQFLDEERQGPPLGGQQSQPSAGDGNQDDGPQQGPPQQGG 78
Query: 237 RSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVG-DAPPRAWVTSGL 295
+ +GPP P+ +P P H P RP P G PPR G
Sbjct: 79 QQQQGPPPPQGKPQGPPQQGGH---------PPPPQGRPQGPPQQGGHPRPPR-----GR 124
Query: 296 PQPPPRRSG-ALGTPRPSTG 314
PQ PP++ G G P P G
Sbjct: 125 PQGPPQQGGHQQGPPPPPPG 144
>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
1 [Homo sapiens]
Length = 828
Score = 43.5 bits (101), Expect = 2e-04
Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 18/127 (14%)
Query: 173 QHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPA----------GPRPGPEPAGLGR 222
Q KV ++++D + + D G G+ A PP GP GP P
Sbjct: 380 QKKVAEQTFIKDDYLETISSPKDFGLGQRATPPPPPPPTYRTVVSSPGPGSGPGPGTTSG 439
Query: 223 RPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHV 282
P A + RS+ PP P +PPS P G GD + RP SP H
Sbjct: 440 ASSPARPATPLVPCRSTT-PPPPPPRPPSRPKLPPGKPGVGD-------VSRPFSPPIHS 491
Query: 283 GDAPPRA 289
PP A
Sbjct: 492 SSPPPIA 498
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 43.1 bits (100), Expect = 3e-04
Identities = 42/158 (26%), Positives = 54/158 (34%), Gaps = 17/158 (10%)
Query: 164 PRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAG---- 219
P +P+ P PQ G + +G G PP G GP P G
Sbjct: 239 PGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 294
Query: 220 -LGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSP 278
R P Q G +GPP P +P P G+ + P +P P
Sbjct: 295 RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ------GGNKPQGPPPPGKPQGP 348
Query: 279 LPHVGDAPPRAWVTSGLPQPPPRRSG--ALGTPRPSTG 314
P G A G PQ PP++ G G P P+ G
Sbjct: 349 PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGG 386
Score = 38.9 bits (89), Expect = 0.006
Identities = 40/155 (25%), Positives = 51/155 (32%), Gaps = 17/155 (10%)
Query: 164 PRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAG---- 219
P +P+ P PQ G + +G G PP G GP P G
Sbjct: 177 PGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKS 232
Query: 220 -LGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSP 278
R P Q G +GPP P +P P G+ + P +P P
Sbjct: 233 QSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ------GGNKPQGPPPPGKPQGP 286
Query: 279 LPHVGDAPPRAWVTSGLPQPPPRRSG--ALGTPRP 311
P G + G PQ PP + G G P P
Sbjct: 287 PPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPP 321
Score = 38.1 bits (87), Expect = 0.010
Identities = 40/155 (25%), Positives = 51/155 (32%), Gaps = 17/155 (10%)
Query: 164 PRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAG---- 219
P +P+ P PQ G + +G G PP G GP P G
Sbjct: 115 PGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKS 170
Query: 220 -LGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSP 278
R P Q G +GPP P +P P G+ + P +P P
Sbjct: 171 RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ------GGNKPQGPPPPGKPQGP 224
Query: 279 LPHVGDAPPRAWVTSGLPQPPPRRSG--ALGTPRP 311
P + A G PQ PP + G G P P
Sbjct: 225 PPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPP 259
Score = 36.2 bits (82), Expect = 0.040
Identities = 39/154 (25%), Positives = 51/154 (33%), Gaps = 16/154 (10%)
Query: 164 PRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAG---- 219
P +P+ P PQ G + +G G PP G GP P G
Sbjct: 54 PGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSR 109
Query: 220 LGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPL 279
R P Q G +GPP P +P P G+ + P +P P
Sbjct: 110 SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ------GGNKPQGPPPPGKPQGPP 163
Query: 280 PHVGDAPPRAWVTSGLPQPPPRRSG--ALGTPRP 311
P + + G PQ PP + G G P P
Sbjct: 164 PQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPP 197
Score = 33.1 bits (74), Expect = 0.34
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 231 QGA--MGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPR 288
QGA G +GPP P +P P G P P +P P P G+ P+
Sbjct: 37 QGAPPQGGNKPQGPPSPPGKPQGPPPQ-----GGNQPQGPPPPPGKPQGPPPQGGN-KPQ 90
Query: 289 AWVTSGLPQPPPRRSGALGTPRPSTG 314
G PQ PP + +PR G
Sbjct: 91 GPPPPGKPQGPPPQGDKSRSPRSPPG 116
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 42.7 bits (99), Expect = 4e-04
Identities = 40/155 (25%), Positives = 54/155 (34%), Gaps = 35/155 (22%)
Query: 186 NSDESDAEGDLGDGEEAEAEAPPAGPRPGPEP-------------------AGLGRRPCP 226
+S S + + +E E E P A P P P AG P P
Sbjct: 1050 SSSSSSSSSESSSEDEEEEERPAALPSASPPPREVPVPTPAPVEVPVPERVAGSPVTPLP 1109
Query: 227 YEQAQGAM-GRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDA 285
++A A + E PP +PP PA G P PR +RP SP+P +
Sbjct: 1110 EQEASPARPAGPTEESPPSAPLRPPEPPA--------GPPAPAPRPDERPSSPIPLLPPP 1161
Query: 286 PPRAWVTS-------GLPQPPPRRSGALGTPRPST 313
R S P+PPP P P++
Sbjct: 1162 KKRRKTVSFSAIEVVPAPEPPPATPPQAKFPGPAS 1196
Score = 31.6 bits (70), Expect = 0.98
Identities = 27/95 (28%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Query: 166 QPRIPRPQHKVRGYRYLEEDNS-DESDAEGDLGDGEEAEA-----EAPPAGPRPGPEPAG 219
+P R K G +S D+ + D G A + PP P P P P
Sbjct: 558 EPGATRESPKANGQNQASPCSSGDDMEISDDDRGGSPPPAPTPPQQPPPPPPPPPPPPPY 617
Query: 220 LGRRPCPYEQAQGA-MGRRSSEGPPGPRTQPPSSP 253
L P Y Q A + +GPP P PP P
Sbjct: 618 LASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPPP 652
Score = 29.3 bits (64), Expect = 4.9
Identities = 40/159 (25%), Positives = 53/159 (33%), Gaps = 16/159 (10%)
Query: 169 IPRPQHKVRGYRY---LEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPC 225
+P QH R L+E S S D + EE + A P+G G PC
Sbjct: 480 VPFAQHSSLDSRIEMLLKEQRSKFSFLASDTEEEEENSSMVLGARDTGSEVPSGSGHGPC 539
Query: 226 --PYEQAQGAMGRRSSEGPPG-PRTQPPSSPASVYHVLGRGDPLRV---------PRCLQ 273
P A + G PG R P ++ + GD + + P
Sbjct: 540 TPPPAPANFEDVAPTGSGEPGATRESPKANGQNQASPCSSGDDMEISDDDRGGSPPPAPT 599
Query: 274 RPLSPLPHVGDAPPRAWVTSGLPQP-PPRRSGALGTPRP 311
P P P PP + LP PP + L PRP
Sbjct: 600 PPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLPPRP 638
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 42.4 bits (98), Expect = 6e-04
Identities = 37/114 (32%), Positives = 41/114 (35%), Gaps = 12/114 (10%)
Query: 206 APPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPG---PRTQPPSSPASV--YHVL 260
APP G PGP+P G P P +G P G P T PP SP S +
Sbjct: 303 APPLGSPPGPKP-GFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDF 361
Query: 261 GRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTG 314
P P P P PP + T G P PPP P P TG
Sbjct: 362 AAPPPPPPPPAADYPTLP------PPPLSQPTGGAPPPPPPPPPPGPPPPPFTG 409
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 42.4 bits (98), Expect = 6e-04
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 190 SDAEGDLGDGEEAEAEAPPAGPRPGPEPAGL------GRRPCPYEQAQGAM--GRRSSEG 241
S+ G G + + P P+PG P G+ G P P +Q +M G G
Sbjct: 1041 SEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSG 1100
Query: 242 PPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPR 301
PG Q P+ A+V +G+ L L P +PLP AP VT P PPP+
Sbjct: 1101 HPGVAAQSPAIVAAV-----QGNLLPSASPLPDPGTPLPPDPTAPSPGTVT---PVPPPQ 1152
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 42.0 bits (97), Expect = 7e-04
Identities = 51/200 (25%), Positives = 66/200 (33%), Gaps = 32/200 (16%)
Query: 140 LLVTLVAATVSYLRMEQKLRRGVAPRQ--------PRIPRPQHKVRGYRYLEEDNSDESD 191
+L+ L++ + L Q L V+ + P+ P PQ G +
Sbjct: 1 MLLILLSVALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQ----GGNKPQGPPPPPGK 56
Query: 192 AEGDLGDGEEAEAEAPPAGPRPGPEPAG----LGRRPCPYEQAQGAMGRRSSEGPPGP-- 245
+G G PP G GP P G R P Q G +GPP P
Sbjct: 57 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPG 116
Query: 246 -----------RTQPPSSPASVYHVLGRGDPLRVPRCLQ-RPLSPLPHVGDAPPRAWVTS 293
R Q P P +GD R PR +P P P G+ P
Sbjct: 117 KPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP 176
Query: 294 GLPQPPPRRSG--ALGTPRP 311
G PQ PP + G G P P
Sbjct: 177 GKPQGPPPQGGKKPQGPPPP 196
Score = 39.7 bits (91), Expect = 0.004
Identities = 41/157 (26%), Positives = 54/157 (34%), Gaps = 16/157 (10%)
Query: 164 PRQPRIPRPQHKVRGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGRR 223
P +P+ P PQ G + +G G + PP G GP P G R
Sbjct: 155 PGKPQGPPPQ----GGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSR 210
Query: 224 ----PCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPL 279
P Q G +GPP P +P P G+ + P +P P
Sbjct: 211 SSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ------GGNKPQGPPPPGKPQGPP 264
Query: 280 PHVGDAPPRAWVTSGLPQPPPRRSG--ALGTPRPSTG 314
G A G PQ PP++ G G P P+ G
Sbjct: 265 AQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGG 301
Score = 39.3 bits (90), Expect = 0.005
Identities = 35/122 (28%), Positives = 45/122 (36%), Gaps = 15/122 (12%)
Query: 199 GEEAEAEAPPAGPRPGPEPAGLGRR--PCPYEQAQGAMGR----RSSEGPPGPRTQPPSS 252
G + + PP G GP P G + P P + QG + RS PPG PP
Sbjct: 44 GNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQ 103
Query: 253 PASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPS 312
G P P +P P P G+ P + G PQ PP + +PR
Sbjct: 104 --------GGNQPQGPPPPPGKPQGPPPQGGNRP-QGPPPPGKPQGPPPQGDKSRSPRSP 154
Query: 313 TG 314
G
Sbjct: 155 PG 156
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 41.6 bits (96), Expect = 0.001
Identities = 36/119 (30%), Positives = 41/119 (34%), Gaps = 7/119 (5%)
Query: 197 GDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASV 256
G G P AG P P G+G P P G PP P P
Sbjct: 1082 GAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIP-------PPPPLPGAGIPPPPP 1134
Query: 257 YHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTGV 315
G P +PR P PLP G PP +G+P PPP + P P GV
Sbjct: 1135 LPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGV 1193
Score = 40.8 bits (94), Expect = 0.002
Identities = 36/112 (32%), Positives = 41/112 (36%), Gaps = 13/112 (11%)
Query: 207 PPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRT---QPPSSPASVYHVLGRG 263
P AG P P G G P P G PP PR PP P + G
Sbjct: 1114 PGAGIPPPPPLPGAGIPPPPPLPGAGI-----PPPPPLPRVGIPPPPPLPGA-----GIP 1163
Query: 264 DPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTGV 315
P +P P PLP VG PP G+P PPP + P P G+
Sbjct: 1164 PPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGM 1215
Score = 39.7 bits (91), Expect = 0.004
Identities = 35/110 (31%), Positives = 40/110 (36%), Gaps = 11/110 (10%)
Query: 207 PPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPL 266
P AG P P G G P P G PP P P P + G G PL
Sbjct: 916 PGAGIPPPPPLPGAGILPLPPLPGAGI-----PPPPPLPGAAIPPPPP----LPGAGIPL 966
Query: 267 R--VPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTG 314
+P P PLP G PP +G+P PPP + P P G
Sbjct: 967 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1016
Score = 39.7 bits (91), Expect = 0.004
Identities = 35/119 (29%), Positives = 39/119 (32%), Gaps = 7/119 (5%)
Query: 197 GDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASV 256
G G P AG P P G G P P G PP P P
Sbjct: 994 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP-------PPPPLPGAGIPPPPP 1046
Query: 257 YHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTGV 315
G P +P P PLP G PP +G+P PPP + P P GV
Sbjct: 1047 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGV 1105
Score = 37.0 bits (84), Expect = 0.023
Identities = 34/118 (28%), Positives = 38/118 (32%), Gaps = 7/118 (5%)
Query: 197 GDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASV 256
G G P AG P P G G P P G PP P P
Sbjct: 1005 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP-------PPPPLPGAGIPPPPP 1057
Query: 257 YHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTG 314
G P +P P PLP G PP +G+P PPP + P P G
Sbjct: 1058 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPG 1115
Score = 36.6 bits (83), Expect = 0.030
Identities = 30/114 (26%), Positives = 38/114 (33%), Gaps = 6/114 (5%)
Query: 201 EAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVL 260
E+ + P G P P P P P + PP T+ P
Sbjct: 865 ESSSSMPGLGMVPPPPP------PLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGA 918
Query: 261 GRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTG 314
G P +P PL PLP G PP + +P PPP + P P G
Sbjct: 919 GIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPG 972
Score = 34.3 bits (77), Expect = 0.15
Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 11/102 (10%)
Query: 224 PCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPRCLQRPLSPLPHVG 283
P P ++ +M PP P + P + + PL+ L P PLP G
Sbjct: 860 PLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAG 919
Query: 284 DAPP-----------RAWVTSGLPQPPPRRSGALGTPRPSTG 314
PP +G+P PPP A+ P P G
Sbjct: 920 IPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 961
Score = 32.3 bits (72), Expect = 0.57
Identities = 35/115 (30%), Positives = 38/115 (33%), Gaps = 12/115 (10%)
Query: 204 AEAPPAGPRPG---PEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHVL 260
A PP P PG P P L R P G PG PP V
Sbjct: 1127 AGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGV---- 1182
Query: 261 GRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTGV 315
G P +P P PLP G PP G+P P A P P TG+
Sbjct: 1183 GIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAP-----APPLPPPGTGI 1232
Score = 28.9 bits (63), Expect = 6.3
Identities = 35/114 (30%), Positives = 39/114 (34%), Gaps = 14/114 (12%)
Query: 197 GDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASV 256
G G P AG P P G+G P P G PP P P P
Sbjct: 1159 GAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGI-----PPPPPLPGAGIPPPPP-- 1211
Query: 257 YHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPR 310
+ G G +P PL P P G PP SG P P S L TP+
Sbjct: 1212 --LPGMG----IPPAPAPPLPP-PGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQ 1258
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 41.6 bits (96), Expect = 0.001
Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 15/118 (12%)
Query: 199 GEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYH 258
G + + PP G GP P G G +P Q G+ P G +++ P SP
Sbjct: 44 GNKPQGPPPPPGKPQGPPPQG-GNKP----QGPPPPGKPQGPPPQGDKSRSPRSPP---- 94
Query: 259 VLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSG--ALGTPRPSTG 314
G P P +P P G A G PQ PP++ G G P P+ G
Sbjct: 95 ----GKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGG 148
Score = 37.0 bits (84), Expect = 0.023
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 193 EGDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSS 252
+G G+++ + P G GP P G G+ P AQG +S+ PPG PP
Sbjct: 78 QGPPPQGDKSRSPRSPPGKPQGPPPQG-GKPQGP--PAQGGSKSQSARSPPGKPQGPPQQ 134
Query: 253 PASVYHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPR 301
+ +G P Q+P +P PPR G P PP+
Sbjct: 135 EGN----NPQGPPPPAGGNPQQPQAPPAGQPQGPPRP-PQGGRPSRPPQ 178
>gi|5729790 CCCTC-binding factor [Homo sapiens]
Length = 727
Score = 41.2 bits (95), Expect = 0.001
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 177 RGYRYLEEDNSDESDAEGDLGDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGR 236
R R +ED+SD +AE DL D E+ E A P P P+P + P P ++ +G
Sbjct: 600 RKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQP--VTPAPPPAKKRRGR--- 654
Query: 237 RSSEGPPGPRTQP-PSSPASVYHV 259
PPG QP + P ++ V
Sbjct: 655 -----PPGRTNQPKQNQPTAIIQV 673
>gi|93141049 collagen, type XII, alpha 1 short isoform precursor [Homo
sapiens]
Length = 1899
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/116 (31%), Positives = 43/116 (37%), Gaps = 10/116 (8%)
Query: 198 DGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVY 257
D + + + P GP P AG P P + G G +GPPG R P
Sbjct: 1769 DYQSSRNQPGPPGPPGPPGSAGARGEPGPGGRP-GFPGTPGMQGPPGERGLPGEKGE--- 1824
Query: 258 HVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPP--PRRSGALGTPRP 311
RG PR L P P PP + + G P PP P SG G P P
Sbjct: 1825 ----RGTGSSGPRGLPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGP 1876
Score = 33.9 bits (76), Expect = 0.20
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 12/89 (13%)
Query: 199 GEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYH 258
GE+ E +GPR P P G E G G S GPPGP +P +S
Sbjct: 1820 GEKGERGTGSSGPRGLPGPPGPQG-----ESRTGPPGSTGSRGPPGPPGRPGNSGI---- 1870
Query: 259 VLGRGDPLRVPRCLQRPLSPLPHVGDAPP 287
RG P C + +P+ G P
Sbjct: 1871 ---RGPPGPPGYCDSSQCASIPYNGQGYP 1896
Score = 30.0 bits (66), Expect = 2.8
Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 15/122 (12%)
Query: 203 EAEAPPAGPRPGPEPAGLGRR-PCPYEQAQGAMGRRSSEGPPGPRTQP-PSSP--ASVYH 258
++ PP P P P G R A G G R GPPGP+ P P P S+
Sbjct: 1580 DSVGPPGPPGPAGGPGAKGPRGERGISGAIGPPGPRGDIGPPGPQGPPGPQGPNGLSIPG 1639
Query: 259 VLGR-------GDPLRVPRC----LQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALG 307
GR G+P R L P P+ GD + P+ PP G+ G
Sbjct: 1640 EQGRQGMKGDAGEPGLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSPG 1699
Query: 308 TP 309
+P
Sbjct: 1700 SP 1701
>gi|93141047 collagen, type XII, alpha 1 long isoform precursor [Homo
sapiens]
Length = 3063
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/116 (31%), Positives = 43/116 (37%), Gaps = 10/116 (8%)
Query: 198 DGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVY 257
D + + + P GP P AG P P + G G +GPPG R P
Sbjct: 2933 DYQSSRNQPGPPGPPGPPGSAGARGEPGPGGRP-GFPGTPGMQGPPGERGLPGEKGE--- 2988
Query: 258 HVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPP--PRRSGALGTPRP 311
RG PR L P P PP + + G P PP P SG G P P
Sbjct: 2989 ----RGTGSSGPRGLPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGP 3040
Score = 33.9 bits (76), Expect = 0.20
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 12/89 (13%)
Query: 199 GEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYH 258
GE+ E +GPR P P G E G G S GPPGP +P +S
Sbjct: 2984 GEKGERGTGSSGPRGLPGPPGPQG-----ESRTGPPGSTGSRGPPGPPGRPGNSGI---- 3034
Query: 259 VLGRGDPLRVPRCLQRPLSPLPHVGDAPP 287
RG P C + +P+ G P
Sbjct: 3035 ---RGPPGPPGYCDSSQCASIPYNGQGYP 3060
Score = 30.0 bits (66), Expect = 2.8
Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 15/122 (12%)
Query: 203 EAEAPPAGPRPGPEPAGLGRR-PCPYEQAQGAMGRRSSEGPPGPRTQP-PSSP--ASVYH 258
++ PP P P P G R A G G R GPPGP+ P P P S+
Sbjct: 2744 DSVGPPGPPGPAGGPGAKGPRGERGISGAIGPPGPRGDIGPPGPQGPPGPQGPNGLSIPG 2803
Query: 259 VLGR-------GDPLRVPRC----LQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALG 307
GR G+P R L P P+ GD + P+ PP G+ G
Sbjct: 2804 EQGRQGMKGDAGEPGLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSPG 2863
Query: 308 TP 309
+P
Sbjct: 2864 SP 2865
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/119 (31%), Positives = 43/119 (36%), Gaps = 17/119 (14%)
Query: 207 PPAGPRPG-------PEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHV 259
PP G RP P P + P P A + PP R PP P S
Sbjct: 269 PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPS---S 325
Query: 260 LGRGDPLRVPR---CLQRPLSPLPHVGDAPPRAWVTSGLPQP----PPRRSGALGTPRP 311
G + R+P+ L PLP G + P S P P PP RSG L P P
Sbjct: 326 SGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPP 384
Score = 37.0 bits (84), Expect = 0.023
Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 3/97 (3%)
Query: 207 PPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEG---PPGPRTQPPSSPASVYHVLGRG 263
P G +P P + P P + + G G P P PP P + LG G
Sbjct: 174 PDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGG 233
Query: 264 DPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPP 300
+ P P S P + P RA P PPP
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPP 270
Score = 34.3 bits (77), Expect = 0.15
Identities = 38/120 (31%), Positives = 46/120 (38%), Gaps = 26/120 (21%)
Query: 197 GDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASV 256
G A+ +PP+GP P P+ G R P E + M P PR S P S+
Sbjct: 133 GRSTSAKPFSPPSGPGRFPVPSP-GHRSGPPEPQRNRM--------PPPRPDVGSKPDSI 183
Query: 257 YHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTGVR 316
P VP RP+ PH +PP V G QP P TP P G R
Sbjct: 184 --------PPPVP-STPRPIQSSPHNRGSPP---VPGGPRQPSPG-----PTPPPFPGNR 226
Score = 29.3 bits (64), Expect = 4.9
Identities = 35/126 (27%), Positives = 43/126 (34%), Gaps = 24/126 (19%)
Query: 208 PAGPR---PGPEPAGLGRRPCPYEQAQGAMG---RRSSEGPPGPRTQPPSSPASVYHVLG 261
P GPR PGP P P P + G R+S P + P P + L
Sbjct: 207 PGGPRQPSPGPTPP-----PFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALD 261
Query: 262 RGDPLRVPRCLQRP------LSPLPHVGDAPP-------RAWVTSGLPQPPPRRSGALGT 308
P P RP + P P + PP A + P PPP R G
Sbjct: 262 DKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPL 321
Query: 309 PRPSTG 314
P S+G
Sbjct: 322 PPSSSG 327
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/119 (31%), Positives = 43/119 (36%), Gaps = 17/119 (14%)
Query: 207 PPAGPRPG-------PEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASVYHV 259
PP G RP P P + P P A + PP R PP P S
Sbjct: 269 PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPS---S 325
Query: 260 LGRGDPLRVPR---CLQRPLSPLPHVGDAPPRAWVTSGLPQP----PPRRSGALGTPRP 311
G + R+P+ L PLP G + P S P P PP RSG L P P
Sbjct: 326 SGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPP 384
Score = 37.0 bits (84), Expect = 0.023
Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 3/97 (3%)
Query: 207 PPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEG---PPGPRTQPPSSPASVYHVLGRG 263
P G +P P + P P + + G G P P PP P + LG G
Sbjct: 174 PDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGG 233
Query: 264 DPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPP 300
+ P P S P + P RA P PPP
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPP 270
Score = 34.3 bits (77), Expect = 0.15
Identities = 38/120 (31%), Positives = 46/120 (38%), Gaps = 26/120 (21%)
Query: 197 GDGEEAEAEAPPAGPRPGPEPAGLGRRPCPYEQAQGAMGRRSSEGPPGPRTQPPSSPASV 256
G A+ +PP+GP P P+ G R P E + M P PR S P S+
Sbjct: 133 GRSTSAKPFSPPSGPGRFPVPSP-GHRSGPPEPQRNRM--------PPPRPDVGSKPDSI 183
Query: 257 YHVLGRGDPLRVPRCLQRPLSPLPHVGDAPPRAWVTSGLPQPPPRRSGALGTPRPSTGVR 316
P VP RP+ PH +PP V G QP P TP P G R
Sbjct: 184 --------PPPVP-STPRPIQSSPHNRGSPP---VPGGPRQPSPG-----PTPPPFPGNR 226
Score = 29.3 bits (64), Expect = 4.9
Identities = 35/126 (27%), Positives = 43/126 (34%), Gaps = 24/126 (19%)
Query: 208 PAGPR---PGPEPAGLGRRPCPYEQAQGAMG---RRSSEGPPGPRTQPPSSPASVYHVLG 261
P GPR PGP P P P + G R+S P + P P + L
Sbjct: 207 PGGPRQPSPGPTPP-----PFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALD 261
Query: 262 RGDPLRVPRCLQRP------LSPLPHVGDAPP-------RAWVTSGLPQPPPRRSGALGT 308
P P RP + P P + PP A + P PPP R G
Sbjct: 262 DKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPL 321
Query: 309 PRPSTG 314
P S+G
Sbjct: 322 PPSSSG 327
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,775,728
Number of Sequences: 37866
Number of extensions: 1133132
Number of successful extensions: 11094
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 904
Number of HSP's that attempted gapping in prelim test: 7877
Number of HSP's gapped (non-prelim): 3310
length of query: 319
length of database: 18,247,518
effective HSP length: 102
effective length of query: 217
effective length of database: 14,385,186
effective search space: 3121585362
effective search space used: 3121585362
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.