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Search of human proteins with 239746776
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo
sapiens]
(210 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo ... 439 e-124
gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo ... 305 2e-83
gi|239752263 PREDICTED: hypothetical protein XP_002348185 [Homo ... 294 4e-80
gi|239757968 PREDICTED: hypothetical protein [Homo sapiens] 162 3e-40
gi|239747023 PREDICTED: hypothetical protein XP_002343907 [Homo ... 162 3e-40
gi|239747021 PREDICTED: hypothetical protein XP_002343906 [Homo ... 162 3e-40
gi|150170670 piccolo isoform 2 [Homo sapiens] 66 2e-11
gi|150378539 piccolo isoform 1 [Homo sapiens] 66 2e-11
gi|146134388 YLP motif containing 1 [Homo sapiens] 63 2e-10
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 59 3e-09
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 59 4e-09
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 57 9e-09
gi|157168329 formin 1 [Homo sapiens] 57 1e-08
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 57 1e-08
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 57 1e-08
gi|11386183 WAS protein family, member 2 [Homo sapiens] 56 2e-08
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 56 2e-08
gi|33356148 formin-like 1 [Homo sapiens] 56 2e-08
gi|18079216 CASK interacting protein 1 [Homo sapiens] 55 4e-08
gi|15529996 son of sevenless homolog 1 [Homo sapiens] 55 4e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 6e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 55 6e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 54 7e-08
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 54 7e-08
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 54 7e-08
gi|150417989 cyclin K isoform 1 [Homo sapiens] 54 7e-08
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 54 1e-07
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 54 1e-07
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 53 2e-07
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 53 2e-07
>gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo
sapiens]
Length = 210
Score = 439 bits (1129), Expect = e-124
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MTHDVIRTAFRCFTDNQRSIYEIADAMCISMGYLMKPQAIPVPLLVTSSGIGQGSSWPST 60
MTHDVIRTAFRCFTDNQRSIYEIADAMCISMGYLMKPQAIPVPLLVTSSGIGQGSSWPST
Sbjct: 1 MTHDVIRTAFRCFTDNQRSIYEIADAMCISMGYLMKPQAIPVPLLVTSSGIGQGSSWPST 60
Query: 61 HSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSP 120
HSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSP
Sbjct: 61 HSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSP 120
Query: 121 DSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP 180
DSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP
Sbjct: 121 DSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP 180
Query: 181 QVPSRPPSLSQPLSSRVSLYELLFPSWPPW 210
QVPSRPPSLSQPLSSRVSLYELLFPSWPPW
Sbjct: 181 QVPSRPPSLSQPLSSRVSLYELLFPSWPPW 210
>gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo
sapiens]
Length = 225
Score = 305 bits (781), Expect = 2e-83
Identities = 149/162 (91%), Positives = 149/162 (91%), Gaps = 10/162 (6%)
Query: 59 STHSVVLPSRSPDSVVPPPGSPDSVV----------PPPRSPDSVVPPPGSPDSVVLPPR 108
S SVVLP RSPDSVVPPPGSPDSVV PPPRSPDSVVPPPGSPDSVVLPPR
Sbjct: 64 SPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPRSPDSVVPPPGSPDSVVLPPR 123
Query: 109 SPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAG 168
SPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAG
Sbjct: 124 SPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAG 183
Query: 169 RWGRVPLARSPPQVPSRPPSLSQPLSSRVSLYELLFPSWPPW 210
RWGRVPLARSPPQVPSRPPSLSQPLSSRVSLYELLFPSWPPW
Sbjct: 184 RWGRVPLARSPPQVPSRPPSLSQPLSSRVSLYELLFPSWPPW 225
Score = 98.6 bits (244), Expect = 3e-21
Identities = 68/146 (46%), Positives = 73/146 (50%), Gaps = 34/146 (23%)
Query: 51 IGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSP 110
+ GS+WPSTHSVVLPSRS PDSVVLP RSP
Sbjct: 6 VSVGSTWPSTHSVVLPSRS------------------------------PDSVVLPSRSP 35
Query: 111 DSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGG-RAGSPRSLAPPAAARAEGAPGWAGR 169
DSVV PPGSPDSVVLP RSPDSVVPP SPDS SP S+ PP +
Sbjct: 36 DSVVLPPGSPDSVVLPSRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSP 95
Query: 170 WGRVPLARSPPQV---PSRPPSLSQP 192
VP RSP V P P S+ P
Sbjct: 96 DSVVPPPRSPDSVVPPPGSPDSVVLP 121
>gi|239752263 PREDICTED: hypothetical protein XP_002348185 [Homo
sapiens]
Length = 220
Score = 294 bits (752), Expect = 4e-80
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 73 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 132
VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS
Sbjct: 83 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
Query: 133 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 192
VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP
Sbjct: 143 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
Query: 193 LSSRVSLYELLFPSWPPW 210
LSSRVSLYELLFPSWPPW
Sbjct: 203 LSSRVSLYELLFPSWPPW 220
>gi|239757968 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 162 bits (409), Expect = 3e-40
Identities = 77/82 (93%), Positives = 79/82 (96%)
Query: 129 SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 188
+P SVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS
Sbjct: 3 APYSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 62
Query: 189 LSQPLSSRVSLYELLFPSWPPW 210
LSQPLSSRVSL+ELL PS PPW
Sbjct: 63 LSQPLSSRVSLHELLLPSRPPW 84
Score = 33.1 bits (74), Expect = 0.18
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 61 HSVVLPSRSPDSVVPPPGSPDSVVPPPRSPD----------SVVPPPGSPDSVVLPPRSP 110
+SVV P+RSPDS GSP S+ PP + VP SP V P S
Sbjct: 5 YSVVPPARSPDS-GGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSL 63
Query: 111 DSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGW 166
+ S ++LP R P R+ + R G P S R+ G+ W
Sbjct: 64 SQPLSSRVSLHELLLPSRPPWVTHLLLRATGARLRGGLPLSCLLGLGRRSRGSRLW 119
>gi|239747023 PREDICTED: hypothetical protein XP_002343907 [Homo
sapiens]
Length = 157
Score = 162 bits (409), Expect = 3e-40
Identities = 77/82 (93%), Positives = 79/82 (96%)
Query: 129 SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 188
+P SVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS
Sbjct: 3 APYSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 62
Query: 189 LSQPLSSRVSLYELLFPSWPPW 210
LSQPLSSRVSL+ELL PS PPW
Sbjct: 63 LSQPLSSRVSLHELLLPSRPPW 84
Score = 33.1 bits (74), Expect = 0.18
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 61 HSVVLPSRSPDSVVPPPGSPDSVVPPPRSPD----------SVVPPPGSPDSVVLPPRSP 110
+SVV P+RSPDS GSP S+ PP + VP SP V P S
Sbjct: 5 YSVVPPARSPDS-GGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSL 63
Query: 111 DSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGW 166
+ S ++LP R P R+ + R G P S R+ G+ W
Sbjct: 64 SQPLSSRVSLHELLLPSRPPWVTHLLLRATGARLRGGLPLSCLLGLGRRSRGSRLW 119
>gi|239747021 PREDICTED: hypothetical protein XP_002343906 [Homo
sapiens]
Length = 157
Score = 162 bits (409), Expect = 3e-40
Identities = 77/82 (93%), Positives = 79/82 (96%)
Query: 129 SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 188
+P SVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS
Sbjct: 3 APYSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 62
Query: 189 LSQPLSSRVSLYELLFPSWPPW 210
LSQPLSSRVSL+ELL PS PPW
Sbjct: 63 LSQPLSSRVSLHELLLPSRPPW 84
Score = 33.1 bits (74), Expect = 0.18
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 61 HSVVLPSRSPDSVVPPPGSPDSVVPPPRSPD----------SVVPPPGSPDSVVLPPRSP 110
+SVV P+RSPDS GSP S+ PP + VP SP V P S
Sbjct: 5 YSVVPPARSPDS-GGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSL 63
Query: 111 DSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGW 166
+ S ++LP R P R+ + R G P S R+ G+ W
Sbjct: 64 SQPLSSRVSLHELLLPSRPPWVTHLLLRATGARLRGGLPLSCLLGLGRRSRGSRLW 119
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 66.2 bits (160), Expect = 2e-11
Identities = 49/159 (30%), Positives = 62/159 (38%), Gaps = 18/159 (11%)
Query: 37 PQAIPVPLLVTSSGIGQG-SSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVP 95
P P P + + G G +S T PS+ P PPP P PPP+ P S P
Sbjct: 440 PVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKP 499
Query: 96 PPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPP 155
P P S PP+ P P P P S P + P S P A+ P S A P
Sbjct: 500 PSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP----------SPAKP 549
Query: 156 AAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLS 194
+A ++ G + P Q P+ PS QP S
Sbjct: 550 SAQQSTKPVSQTG-------SGKPLQPPTVSPSAKQPPS 581
Score = 44.3 bits (103), Expect = 8e-05
Identities = 40/132 (30%), Positives = 49/132 (37%), Gaps = 8/132 (6%)
Query: 65 LPSRS-PDSVVPPPGSPDSVVPP-PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDS 122
LPS S P P PG P + P +S PP P + P V PP P
Sbjct: 298 LPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPG 357
Query: 123 VVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP-- 180
PP P + PA+ P + P S P A A+ PG + P PP
Sbjct: 358 TTKPPAQP---LGPAKPPAQQTGSEKPSSEQPGPKALAQ-PPGVGKTPAQQPGPAKPPTQ 413
Query: 181 QVPSRPPSLSQP 192
QV + P QP
Sbjct: 414 QVGTPKPLAQQP 425
Score = 41.2 bits (95), Expect = 6e-04
Identities = 42/145 (28%), Positives = 54/145 (37%), Gaps = 25/145 (17%)
Query: 49 SGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPR 108
SG SS P+ S S D PP P PPP P PPP PP
Sbjct: 2378 SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPP----PPPPPP----PPP--------PPP 2421
Query: 109 SPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAG 168
P +PPP SP +LP + P + + +L A R+ G P
Sbjct: 2422 PPPPPLPPPTSPKPTILPKKKLTVASPVTTATP---LFDAVTTLETTAVLRSNGLP---- 2474
Query: 169 RWGRVPLARSPPQVPSRPPSLSQPL 193
R+ +PP VP +P S+ L
Sbjct: 2475 -VTRI-CTTAPPPVPPKPSSIPSGL 2497
Score = 39.7 bits (91), Expect = 0.002
Identities = 48/181 (26%), Positives = 66/181 (36%), Gaps = 23/181 (12%)
Query: 37 PQAIPVPLLVTSSGIGQ-GSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVP 95
P+A+ P V + Q G + P T V P P + P SP P ++P
Sbjct: 388 PKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK--PLAQQPGLQSPAKAPGPTKTPVQQPG 445
Query: 96 P---------PGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRA 146
P PG + P P S +P P P PP+ P PA+ P +
Sbjct: 446 PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKP-----PPQQPG----PAKPPPQQPGS 496
Query: 147 GSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP--QVPSRPPSLSQPLSSRVSLYELLF 204
P S P + PG A + P + PP Q S PS QP ++ S +
Sbjct: 497 AKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTK 556
Query: 205 P 205
P
Sbjct: 557 P 557
Score = 37.7 bits (86), Expect = 0.007
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 66 PSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVL 125
P + P P P P S PP + P S P P + V GS
Sbjct: 510 PPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSG----- 564
Query: 126 PPRSPDSVVPPARSPDSGGRAGSPRSLAP 154
P P +V P A+ P S G P+++ P
Sbjct: 565 KPLQPPTVSPSAKQPPS---QGLPKTICP 590
Score = 32.7 bits (73), Expect = 0.23
Identities = 44/161 (27%), Positives = 58/161 (36%), Gaps = 29/161 (18%)
Query: 64 VLPSRSPDSVVPPPGSPDSVVPPP------RSPDSVVPPPGS----PDSVVLPPRSPDSV 113
V P P PP P PP P S P P + P P + P
Sbjct: 349 VKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA 408
Query: 114 VPPP---GSPDSVVLPP--RSPDSVVPPARSP-DSGGRAGSPRSLAPPAAARAEGA---- 163
PP G+P + P +SP P ++P G P A P A+
Sbjct: 409 KPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTK 468
Query: 164 -----PGWAGRWGRVP-LARSPPQVP--SRPPSLSQPLSSR 196
PG A + P A+ PPQ P ++PPS QP S++
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS-QQPGSTK 508
Score = 30.0 bits (66), Expect = 1.5
Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Query: 58 PSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPP 117
P HS P +P P P P + PP+S P P V ++P + P
Sbjct: 952 PGPHSQSGPG-APMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEP 1010
Query: 118 GSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLAR 177
+ + + + PP + DS P+ P P PL +
Sbjct: 1011 KAEQAPTVKRTETEKKPPPIK--DSKSLTAEPQKAVLPTKLEKSPKPE-----STCPLCK 1063
Query: 178 SPPQVPSRPP 187
+ + S+ P
Sbjct: 1064 TELNIGSKDP 1073
Score = 29.3 bits (64), Expect = 2.5
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 69 SPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPR 128
SP S + P + +S P P +P SP V+ PD PP SP + + R
Sbjct: 3625 SPISPLSPGKALESAFVPYEKP---LPDDISPQKVL----HPDMAKVPPASPKTAKMMQR 3677
Query: 129 SPDSVVPPARSPDSGGRA 146
S P + + D RA
Sbjct: 3678 SMSDPKPLSPTADESSRA 3695
Score = 27.3 bits (59), Expect = 9.6
Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 67 SRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLP 126
S PD+ P GSP P P + +V P SP R ++ +P S
Sbjct: 863 SPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKS---Q 919
Query: 127 PRSPDSVVPPARSPDSGGRAGSPRSLAPPAA--ARAEGAPGWAGRWG-RVPLARSPPQVP 183
P +P V +G G S+ A+ G PG + G P+ ++P P
Sbjct: 920 PTTPQETV-------TGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAP--AP 970
Query: 184 SRPPSLSQPLSS 195
S+PP+ P S
Sbjct: 971 SQPPTSQGPPKS 982
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 66.2 bits (160), Expect = 2e-11
Identities = 49/159 (30%), Positives = 62/159 (38%), Gaps = 18/159 (11%)
Query: 37 PQAIPVPLLVTSSGIGQG-SSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVP 95
P P P + + G G +S T PS+ P PPP P PPP+ P S P
Sbjct: 440 PVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKP 499
Query: 96 PPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPP 155
P P S PP+ P P P P S P + P S P A+ P S A P
Sbjct: 500 PSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP----------SPAKP 549
Query: 156 AAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLS 194
+A ++ G + P Q P+ PS QP S
Sbjct: 550 SAQQSTKPVSQTG-------SGKPLQPPTVSPSAKQPPS 581
Score = 44.3 bits (103), Expect = 8e-05
Identities = 40/132 (30%), Positives = 49/132 (37%), Gaps = 8/132 (6%)
Query: 65 LPSRS-PDSVVPPPGSPDSVVPP-PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDS 122
LPS S P P PG P + P +S PP P + P V PP P
Sbjct: 298 LPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPG 357
Query: 123 VVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP-- 180
PP P + PA+ P + P S P A A+ PG + P PP
Sbjct: 358 TTKPPAQP---LGPAKPPAQQTGSEKPSSEQPGPKALAQ-PPGVGKTPAQQPGPAKPPTQ 413
Query: 181 QVPSRPPSLSQP 192
QV + P QP
Sbjct: 414 QVGTPKPLAQQP 425
Score = 41.2 bits (95), Expect = 6e-04
Identities = 42/145 (28%), Positives = 54/145 (37%), Gaps = 25/145 (17%)
Query: 49 SGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPR 108
SG SS P+ S S D PP P PPP P PPP PP
Sbjct: 2378 SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPP----PPPPPP----PPP--------PPP 2421
Query: 109 SPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAG 168
P +PPP SP +LP + P + + +L A R+ G P
Sbjct: 2422 PPPPPLPPPTSPKPTILPKKKLTVASPVTTATP---LFDAVTTLETTAVLRSNGLP---- 2474
Query: 169 RWGRVPLARSPPQVPSRPPSLSQPL 193
R+ +PP VP +P S+ L
Sbjct: 2475 -VTRI-CTTAPPPVPPKPSSIPSGL 2497
Score = 39.7 bits (91), Expect = 0.002
Identities = 48/181 (26%), Positives = 66/181 (36%), Gaps = 23/181 (12%)
Query: 37 PQAIPVPLLVTSSGIGQ-GSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVP 95
P+A+ P V + Q G + P T V P P + P SP P ++P
Sbjct: 388 PKALAQPPGVGKTPAQQPGPAKPPTQQVGTPK--PLAQQPGLQSPAKAPGPTKTPVQQPG 445
Query: 96 P---------PGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRA 146
P PG + P P S +P P P PP+ P PA+ P +
Sbjct: 446 PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKP-----PPQQPG----PAKPPPQQPGS 496
Query: 147 GSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP--QVPSRPPSLSQPLSSRVSLYELLF 204
P S P + PG A + P + PP Q S PS QP ++ S +
Sbjct: 497 AKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTK 556
Query: 205 P 205
P
Sbjct: 557 P 557
Score = 37.7 bits (86), Expect = 0.007
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 66 PSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVL 125
P + P P P P S PP + P S P P + V GS
Sbjct: 510 PPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSG----- 564
Query: 126 PPRSPDSVVPPARSPDSGGRAGSPRSLAP 154
P P +V P A+ P S G P+++ P
Sbjct: 565 KPLQPPTVSPSAKQPPS---QGLPKTICP 590
Score = 32.7 bits (73), Expect = 0.23
Identities = 44/161 (27%), Positives = 58/161 (36%), Gaps = 29/161 (18%)
Query: 64 VLPSRSPDSVVPPPGSPDSVVPPP------RSPDSVVPPPGS----PDSVVLPPRSPDSV 113
V P P PP P PP P S P P + P P + P
Sbjct: 349 VKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA 408
Query: 114 VPPP---GSPDSVVLPP--RSPDSVVPPARSP-DSGGRAGSPRSLAPPAAARAEGA---- 163
PP G+P + P +SP P ++P G P A P A+
Sbjct: 409 KPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTK 468
Query: 164 -----PGWAGRWGRVP-LARSPPQVP--SRPPSLSQPLSSR 196
PG A + P A+ PPQ P ++PPS QP S++
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPS-QQPGSTK 508
Score = 30.0 bits (66), Expect = 1.5
Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Query: 58 PSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPP 117
P HS P +P P P P + PP+S P P V ++P + P
Sbjct: 952 PGPHSQSGPG-APMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEP 1010
Query: 118 GSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLAR 177
+ + + + PP + DS P+ P P PL +
Sbjct: 1011 KAEQAPTVKRTETEKKPPPIK--DSKSLTAEPQKAVLPTKLEKSPKPE-----STCPLCK 1063
Query: 178 SPPQVPSRPP 187
+ + S+ P
Sbjct: 1064 TELNIGSKDP 1073
Score = 29.3 bits (64), Expect = 2.5
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 69 SPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPR 128
SP S + P + +S P P +P SP V+ PD PP SP + + R
Sbjct: 3625 SPISPLSPGKALESAFVPYEKP---LPDDISPQKVL----HPDMAKVPPASPKTAKMMQR 3677
Query: 129 SPDSVVPPARSPDSGGRA 146
S P + + D RA
Sbjct: 3678 SMSDPKPLSPTADESSRA 3695
Score = 27.3 bits (59), Expect = 9.6
Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 15/132 (11%)
Query: 67 SRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLP 126
S PD+ P GSP P P + +V P SP R ++ +P S
Sbjct: 863 SPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKS---Q 919
Query: 127 PRSPDSVVPPARSPDSGGRAGSPRSLAPPAA--ARAEGAPGWAGRWG-RVPLARSPPQVP 183
P +P V +G G S+ A+ G PG + G P+ ++P P
Sbjct: 920 PTTPQETV-------TGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAP--AP 970
Query: 184 SRPPSLSQPLSS 195
S+PP+ P S
Sbjct: 971 SQPPTSQGPPKS 982
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 63.2 bits (152), Expect = 2e-10
Identities = 52/139 (37%), Positives = 63/139 (45%), Gaps = 27/139 (19%)
Query: 74 VPPPGSPDSVVPPPRSPDSVVPPPGSPDSV---VLPPRSPDSVVPPPGSPDSVVLPPRSP 130
+PPP P S +PPP +PPP P S+ V+PP P + VPPPG P V +PP P
Sbjct: 516 MPPPFVPYSQMPPPLP---TMPPPVLPPSLPPPVMPPALP-ATVPPPGMPPPV-MPPSLP 570
Query: 131 DSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLS 190
SV PP P S AG P L PP+ + A PP +P PPSLS
Sbjct: 571 TSVPPPGMPP-SLSSAGPPPVLPPPSLSS----------------AGPPPVLP--PPSLS 611
Query: 191 QPLSSRVSLYELLFPSWPP 209
V L + PP
Sbjct: 612 STAPPPVMPLPPLSSATPP 630
Score = 61.2 bits (147), Expect = 6e-10
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 70 PDSVVPPPGSPDSVVPP--PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPP 127
P +PPP P S+ PP P + + VPPPG P V+PP P S VPPPG +PP
Sbjct: 529 PLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPP-VMPPSLPTS-VPPPG------MPP 580
Query: 128 RSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 187
+ PP P S AG P L PP+ + AP + A PP +P PP
Sbjct: 581 SLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSST--APPPVMPLPPLSSATPPPGIP--PP 636
Query: 188 SLSQPLSSRVS 198
+ Q + +++
Sbjct: 637 GVPQGIPPQLT 647
Score = 60.1 bits (144), Expect = 1e-09
Identities = 53/157 (33%), Positives = 61/157 (38%), Gaps = 31/157 (19%)
Query: 58 PSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSV-------------- 103
PS V+P P + VPPPG P V+PP S + VPPPG P S+
Sbjct: 540 PSLPPPVMPPALP-ATVPPPGMPPPVMPP--SLPTSVPPPGMPPSLSSAGPPPVLPPPSL 596
Query: 104 -------VLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSL-APP 155
VLPP S S PPP P LPP S S PP P G G P L A P
Sbjct: 597 SSAGPPPVLPPPSLSSTAPPPVMP----LPPLS--SATPPPGIPPPGVPQGIPPQLTAAP 650
Query: 156 AAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 192
+ R L +P S PP+ P
Sbjct: 651 VPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHP 687
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 58 PSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPP 117
P S + + S + PPPGS P + P S+V P P +P P +PPP
Sbjct: 1490 PPQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPP 1549
Query: 118 GSPDSVVLPPRSPDSVVPPARS 139
P LPP P V+ P S
Sbjct: 1550 PPPPP--LPP--PPPVIKPQTS 1567
Score = 37.0 bits (84), Expect = 0.012
Identities = 46/198 (23%), Positives = 71/198 (35%), Gaps = 34/198 (17%)
Query: 28 CISMGYLMKPQAIPVPLLVTSSGIGQGSSWPST------------------HSVVLPSRS 69
C+ + + P +P P ++ G G P H ++ R
Sbjct: 74 CVLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRD 133
Query: 70 -PDSVVP---------PPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGS 119
P +VP PP P S +PP +S +PPP P S PP S +PP
Sbjct: 134 GPPGLVPMELESPPESPPVPPGSYMPPSQS---YMPPPQPPPSYY-PPTSSQPYLPPAQP 189
Query: 120 PDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSP 179
S P +S + P S S ++ S + +++A + G LA P
Sbjct: 190 SPSQSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPP 249
Query: 180 PQVP--SRPPSLSQPLSS 195
P P ++ +PL S
Sbjct: 250 PSAPPGNKTTVQQEPLES 267
Score = 33.1 bits (74), Expect = 0.18
Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 38 QAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPP 97
QA P P T + Q W H + L R+ V PG V +P+ V
Sbjct: 278 QAAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTK---VHLPGHKKGPVVAKDTPEPVKEEV 334
Query: 98 GSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGR 145
P + +P SP S PP P+ V PP P+ P + P+ R
Sbjct: 335 TVPATSQVP-ESPSSEEPPLPPPNEEVPPPLPPEE--PQSEDPEEDAR 379
Score = 33.1 bits (74), Expect = 0.18
Identities = 28/109 (25%), Positives = 35/109 (32%), Gaps = 42/109 (38%)
Query: 62 SVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPP------------------------ 97
S+V PS P P P +PPP P + PPP
Sbjct: 1524 SIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLW 1583
Query: 98 -----------------GSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRS 129
P + VLPP S +PPPG P + +PP S
Sbjct: 1584 DTNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPG-PVPMGMPPMS 1631
Score = 28.1 bits (61), Expect = 5.6
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 57 WPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPP 116
W + L S P +P V+PPP S +PPPG P + +PP S PP
Sbjct: 1583 WDTNDEQGLNSEFKSETAAIPSAP--VLPPP-PVHSSIPPPG-PVPMGMPPMSK----PP 1634
Query: 117 P 117
P
Sbjct: 1635 P 1635
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 58.9 bits (141), Expect = 3e-09
Identities = 42/131 (32%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 65 LPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPD--SVVPPPGSPDS 122
LP++SP PPP D PP P ++P P + +LPP P + PP G
Sbjct: 338 LPAQSP----PPPEPADQGPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPP 393
Query: 123 VVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQV 182
V PP S ++V PP+ S +G+ + A +A A A G P A P
Sbjct: 394 VPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAGPAPGF 453
Query: 183 PSRPPSLSQPL 193
P PP + PL
Sbjct: 454 PFPPPWMGMPL 464
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 58.5 bits (140), Expect = 4e-09
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 27/171 (15%)
Query: 34 LMKPQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVV----PPPGSPDSVVPPP-- 87
L P +P P+ T + S P+ + + P + + PPP P S PPP
Sbjct: 687 LAAPAVVPGPVSTTDAS---PQSPPTPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPP 743
Query: 88 -RSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVL-----PPRSPDSVVPPARSPD 141
+ P+ VV P + ++ P + P+ PPP +P+ L PP P+ SP+
Sbjct: 744 TKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPP--PEEAFFSVASPE 801
Query: 142 SGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 192
G +GSP ++ PAA+ + L PP P PP+ P
Sbjct: 802 PAGPSGSPELVSSPAASSSSA----------TALQIQPPGSPDPPPAPPAP 842
Score = 47.4 bits (111), Expect = 9e-06
Identities = 44/130 (33%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 76 PPGSPDSVVPPPRSPDSV----VPPPGSPDSVVLPPRSPDSVVPPPGSPDSVV-LPPRSP 130
P GSP+ V P S S + PPGSPD PP +P + P +P V LP + P
Sbjct: 805 PSGSPELVSSPAASSSSATALQIQPPGSPD----PPPAPPAPAPASSAPGHVAKLPQKEP 860
Query: 131 DSVVPPARSP--DSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 188
P D G +P SL R+ GAPG A P P P +P
Sbjct: 861 VGCSKGGGPPREDVGAPLVTP-SLLQMVRLRSVGAPGGA------PTPALGPSAPQKP-- 911
Query: 189 LSQPLSSRVS 198
L + LS R S
Sbjct: 912 LRRALSGRAS 921
Score = 42.4 bits (98), Expect = 3e-04
Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 8/137 (5%)
Query: 74 VPPPGSPDSVVPPPRSPDSVVPPPGSPDSVV-LPPRSPDSVVPPPGSPDSVVLPPRSPDS 132
+ PPGSPD PP +P + P +P V LP + P G P V P S
Sbjct: 827 IQPPGSPD----PPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPS 882
Query: 133 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 192
++ R G G+P P+A + +GR VP S R + S
Sbjct: 883 LLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVPAPSSGLHAAVRLKACSLA 942
Query: 193 LSSRVSLYELLFPSWPP 209
S +S + P+ PP
Sbjct: 943 ASEGLSSAQ---PNGPP 956
Score = 38.5 bits (88), Expect = 0.004
Identities = 41/158 (25%), Positives = 54/158 (34%), Gaps = 3/158 (1%)
Query: 36 KPQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVP 95
+PQ P S G G P+ + +P SP PP SP+ + P S
Sbjct: 530 QPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSG 589
Query: 96 PPG-SPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAP 154
P P + PP SP PP P+ V SV S S +P +
Sbjct: 590 TPTLPPKGLAGPPASPGKAQPP--KPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSG 647
Query: 155 PAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 192
P G +VP SPP R P+ + P
Sbjct: 648 PQILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAP 685
Score = 37.7 bits (86), Expect = 0.007
Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 38/144 (26%)
Query: 70 PDSVVPPPGSPDSVVPP--PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPP 127
P VP P SP PP PRSP+ P +P V P + D+ P +P + L P
Sbjct: 662 PHPKVPAPFSP----PPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQT-TLTP 716
Query: 128 RSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 187
V+ +SP PP+ P + PP P++ P
Sbjct: 717 LQESPVISKDQSP-------------PPSP----------------PPSYHPPPPPTKKP 747
Query: 188 S--LSQPLSSRVSLYELLFPSWPP 209
+ P +S + L P+WPP
Sbjct: 748 EVVVEAPSASETAEEPLQDPNWPP 771
Score = 29.3 bits (64), Expect = 2.5
Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 14/88 (15%)
Query: 59 STHSVVLPSRSPDSVVPPPGSPDS-------VVPPPRSPDSVVPPPGSPDSVVLPP---R 108
ST S + S + P SP++ +V RS PP S PP R
Sbjct: 968 STASFIFSKGSRKLQLERPVSPETQADLQRNLVAELRSISEQRPPQAPKKSPKAPPPVAR 1027
Query: 109 SPDSVVPPPGSPDSVVLPPRSPDSVVPP 136
P VPPP SP PR+ PP
Sbjct: 1028 KPSVGVPPPASPSY----PRAEPLTAPP 1051
Score = 28.1 bits (61), Expect = 5.6
Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 23/92 (25%)
Query: 72 SVVPPPGSPDSVVPPPRSPDSV-------------VPPPGSPD-------SVVLPPRSPD 111
S P G P++ PP+SP S + P SP+ ++V RS
Sbjct: 948 SSAQPNGPPEAEPRPPQSPASTASFIFSKGSRKLQLERPVSPETQADLQRNLVAELRSIS 1007
Query: 112 SVVPPPGSPDSVVLPP---RSPDSVVPPARSP 140
PP S PP R P VPP SP
Sbjct: 1008 EQRPPQAPKKSPKAPPPVARKPSVGVPPPASP 1039
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 57.4 bits (137), Expect = 9e-09
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 65 LPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPD--SVVPPPGSPDS 122
LP++SP PPP D PP P ++P P + +LPP P + PP G
Sbjct: 338 LPAQSP----PPPEPADQGPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPP 393
Query: 123 VVLPPRSPDSVVPPARSPDSGGR-AGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQ 181
V PP S ++V PP+ S + R +G+ + A +A A A G P A P
Sbjct: 394 VPPPPSSGEAVAPPSTSAAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAGPAPG 453
Query: 182 VPSRPPSLSQPL 193
P PP + PL
Sbjct: 454 FPFPPPWMGMPL 465
Score = 46.2 bits (108), Expect = 2e-05
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 66 PSRSPDSVVP-PPGSPDSVVPP-PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSV 123
P+ P ++P PP P ++PP P + PP G V PP S ++V PP S ++
Sbjct: 355 PAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAAL 414
Query: 124 VLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEG---APGWAGRWGRVPLARSPP 180
P + + + + A P S + P A A G P W G P A P
Sbjct: 415 SRPSGAATTTAAGTSATAASATASGPGSGSAPEAGPAPGFPFPPPWMGMPLPPPFAFPPM 474
Query: 181 QVP 183
VP
Sbjct: 475 PVP 477
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 57.0 bits (136), Expect = 1e-08
Identities = 54/170 (31%), Positives = 68/170 (40%), Gaps = 21/170 (12%)
Query: 37 PQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPP 96
P +IP P + S G+G S P +P S +PPP P +PPP S PP
Sbjct: 649 PASIPPPPPLPS-GLGSLSPAPP-----MPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPP 702
Query: 97 PGSPDSVVLPPRSPDSVVPP-PGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPP 155
P PP P+S PP PG P PP P + P P GS S P
Sbjct: 703 P--------PPPLPNSPAPPNPGGP-----PPAPPPPGLAPPPPPGLFFGLGSSSSQCPR 749
Query: 156 AAARAEGAPGWAGRWGRVPLA-RSPPQVPSRPPSLSQPLSSRVSLYELLF 204
A P W R+ ++ RS P+ SL +P S +E LF
Sbjct: 750 KPAIEPSCPMKPLYWTRIQISDRSQNATPTLWDSLEEPDIRDPSEFEYLF 799
Score = 48.9 bits (115), Expect = 3e-06
Identities = 44/157 (28%), Positives = 59/157 (37%), Gaps = 17/157 (10%)
Query: 38 QAIPVPLLVTS-SGIGQGSSWPSTHSVVLP----SRSPDSVVPPPGSPDSVVPPPRSPD- 91
Q +P L ++S S + + H+ + P + + +PPP P S+ PPP P
Sbjct: 604 QLVPKKLNISSLSQLSPPNDHKDIHAALQPMEGMASNQQKALPPP--PASIPPPPPLPSG 661
Query: 92 --SVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSP 149
S+ P P P PP P PPP P S PP P PP + + G P
Sbjct: 662 LGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPP--PPLPNSPAPPNPGGP 719
Query: 150 RSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRP 186
PP PG L S Q P +P
Sbjct: 720 PPAPPPPGLAPPPPPGLF-----FGLGSSSSQCPRKP 751
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 56.6 bits (135), Expect = 1e-08
Identities = 47/136 (34%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 65 LPSRSPDSVVPP-PGSPDSVVPPPRSP-DSVVPPPGSPDSVVLPP-------RSPDSVV- 114
+PSR+P PP PG +++PPP +P DS PPP P PP SP S+
Sbjct: 567 VPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPG 626
Query: 115 ------PPPGSPDSVVLPPRS-PDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWA 167
PPP S D+ + PP P+ V P+ S GG A P P +A P
Sbjct: 627 GTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLP 686
Query: 168 GRWGRVPLARSPPQVP 183
G G P PP +P
Sbjct: 687 GSAGIPP---PPPPLP 699
Score = 52.4 bits (124), Expect = 3e-07
Identities = 42/148 (28%), Positives = 52/148 (35%), Gaps = 28/148 (18%)
Query: 65 LPSRSPDSVVPPPGSPDSVVPPPRSP-----DSVVPPPGSPDSVVLPPRSPDSVVPPPGS 119
+ S S ++ PP P PP P +++PPP +P PP P PPP
Sbjct: 553 MASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPL 612
Query: 120 PDSVVL---------------PPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAP 164
P V + PP S D+ +PP G SP SL P P
Sbjct: 613 PGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSL--PGGTAIPPPP 670
Query: 165 GWAGRWGRVPLARSPPQVPSRPPSLSQP 192
G AR PP P P S P
Sbjct: 671 PLPGS------ARIPPPPPPLPGSAGIP 692
Score = 49.3 bits (116), Expect = 2e-06
Identities = 40/136 (29%), Positives = 53/136 (38%), Gaps = 16/136 (11%)
Query: 62 SVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVV--PPPGSPDSVVL---PPRSPDSVVPP 116
+++ P +P PP P PPP P V PP P + PP S D+ +PP
Sbjct: 585 TIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPP 644
Query: 117 PGS-PDSVVLPPRSPDSV-----VPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRW 170
P P+ V +P SP S+ +PP R P P +A P G
Sbjct: 645 PPPLPEGVGIP--SPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEA 702
Query: 171 GRVPLARSPPQVPSRP 186
G P PP +P P
Sbjct: 703 GMPP---PPPPLPGGP 715
Score = 47.0 bits (110), Expect = 1e-05
Identities = 42/133 (31%), Positives = 49/133 (36%), Gaps = 41/133 (30%)
Query: 75 PPPGSPDSVVPPPR---------SPDS------VVPPPGSPDSVVLPPRSPDSVVPPPGS 119
PPP S D+ +PPP SP S + PPP P S +PP PPP
Sbjct: 633 PPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPP-------PPPPL 685
Query: 120 PDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSP 179
P S +PP PP P G AG P PP G P P
Sbjct: 686 PGSAGIPP-------PP---PPLPGEAGMPP--PPPPLPGGPGIP-------PPPPFPGG 726
Query: 180 PQVPSRPPSLSQP 192
P +P PP + P
Sbjct: 727 PGIPPPPPGMGMP 739
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/158 (29%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 41 PVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSP 100
P P L GI SS P ++ P P S PP P P P S PPP P
Sbjct: 644 PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPP----PLPGSAGIPPPPPPLP 699
Query: 101 DSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARA 160
+PP PPP P +PP P P P G P PP
Sbjct: 700 GEAGMPP-------PPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPP----PPFGFGV 748
Query: 161 EGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLSSRVS 198
AP +G P P+V R P+ S+ ++ +S
Sbjct: 749 PAAP--VLPFGLTPKKLYKPEVQLRRPNWSKLVAEDLS 784
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 56.6 bits (135), Expect = 1e-08
Identities = 47/136 (34%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 65 LPSRSPDSVVPP-PGSPDSVVPPPRSP-DSVVPPPGSPDSVVLPP-------RSPDSVV- 114
+PSR+P PP PG +++PPP +P DS PPP P PP SP S+
Sbjct: 576 VPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPG 635
Query: 115 ------PPPGSPDSVVLPPRS-PDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWA 167
PPP S D+ + PP P+ V P+ S GG A P P +A P
Sbjct: 636 GTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLP 695
Query: 168 GRWGRVPLARSPPQVP 183
G G P PP +P
Sbjct: 696 GSAGIPP---PPPPLP 708
Score = 52.4 bits (124), Expect = 3e-07
Identities = 42/148 (28%), Positives = 52/148 (35%), Gaps = 28/148 (18%)
Query: 65 LPSRSPDSVVPPPGSPDSVVPPPRSP-----DSVVPPPGSPDSVVLPPRSPDSVVPPPGS 119
+ S S ++ PP P PP P +++PPP +P PP P PPP
Sbjct: 562 MASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPL 621
Query: 120 PDSVVL---------------PPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAP 164
P V + PP S D+ +PP G SP SL P P
Sbjct: 622 PGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSL--PGGTAIPPPP 679
Query: 165 GWAGRWGRVPLARSPPQVPSRPPSLSQP 192
G AR PP P P S P
Sbjct: 680 PLPGS------ARIPPPPPPLPGSAGIP 701
Score = 49.3 bits (116), Expect = 2e-06
Identities = 40/136 (29%), Positives = 53/136 (38%), Gaps = 16/136 (11%)
Query: 62 SVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVV--PPPGSPDSVVL---PPRSPDSVVPP 116
+++ P +P PP P PPP P V PP P + PP S D+ +PP
Sbjct: 594 TIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPP 653
Query: 117 PGS-PDSVVLPPRSPDSV-----VPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRW 170
P P+ V +P SP S+ +PP R P P +A P G
Sbjct: 654 PPPLPEGVGIP--SPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEA 711
Query: 171 GRVPLARSPPQVPSRP 186
G P PP +P P
Sbjct: 712 GMPP---PPPPLPGGP 724
Score = 47.0 bits (110), Expect = 1e-05
Identities = 42/133 (31%), Positives = 49/133 (36%), Gaps = 41/133 (30%)
Query: 75 PPPGSPDSVVPPPR---------SPDS------VVPPPGSPDSVVLPPRSPDSVVPPPGS 119
PPP S D+ +PPP SP S + PPP P S +PP PPP
Sbjct: 642 PPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPP-------PPPPL 694
Query: 120 PDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSP 179
P S +PP PP P G AG P PP G P P
Sbjct: 695 PGSAGIPP-------PP---PPLPGEAGMPP--PPPPLPGGPGIP-------PPPPFPGG 735
Query: 180 PQVPSRPPSLSQP 192
P +P PP + P
Sbjct: 736 PGIPPPPPGMGMP 748
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/158 (29%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 41 PVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSP 100
P P L GI SS P ++ P P S PP P P P S PPP P
Sbjct: 653 PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPP----PLPGSAGIPPPPPPLP 708
Query: 101 DSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARA 160
+PP PPP P +PP P P P G P PP
Sbjct: 709 GEAGMPP-------PPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPP----PPFGFGV 757
Query: 161 EGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLSSRVS 198
AP +G P P+V R P+ S+ ++ +S
Sbjct: 758 PAAP--VLPFGLTPKKLYKPEVQLRRPNWSKLVAEDLS 793
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 56.2 bits (134), Expect = 2e-08
Identities = 47/141 (33%), Positives = 52/141 (36%), Gaps = 24/141 (17%)
Query: 52 GQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSP- 110
G G + P SVV PS P + PP GSP P P PPP P + +PP P
Sbjct: 283 GSGLAGPKRSSVVSPSHPPPA--PPLGSPPG--PKPGFAPPPAPPPPPPPMIGIPPPPPP 338
Query: 111 ----DSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGW 166
PPP SP S P PD PP P A P PP + GAP
Sbjct: 339 VGFGSPGTPPPPSPPSF---PPHPDFAAPPPPPPPPA--ADYPTLPPPPLSQPTGGAPP- 392
Query: 167 AGRWGRVPLARSPPQVPSRPP 187
PP P PP
Sbjct: 393 ---------PPPPPPPPGPPP 404
Score = 44.7 bits (104), Expect = 6e-05
Identities = 46/145 (31%), Positives = 55/145 (37%), Gaps = 36/145 (24%)
Query: 66 PSRSPDSVVPPPGS---------PDSVVPPPRSPDSVVPPPGSPDSVVL--PPRSPDSVV 114
PS S D++ PPP + P RS SVV P P + L PP
Sbjct: 260 PSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRS--SVVSPSHPPPAPPLGSPPGPKPGFA 317
Query: 115 PPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPA-------AARAEGAPGWA 167
PPP P PP P +PP P G G+P +PP+ AA P
Sbjct: 318 PPPAPP-----PPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPP--- 369
Query: 168 GRWGRVPLARSPPQVPSRPPSLSQP 192
P A P +P PP LSQP
Sbjct: 370 ------PPAADYPTLP--PPPLSQP 386
Score = 42.0 bits (97), Expect = 4e-04
Identities = 42/138 (30%), Positives = 48/138 (34%), Gaps = 34/138 (24%)
Query: 72 SVVPPPGSPDSVVPPPR-SPDSVVPPP----------------GSPDSVVLPPRSPDSVV 114
S PPP S + P P S D++ PPP G S V+ P P
Sbjct: 245 SYPPPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPP-A 303
Query: 115 PPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVP 174
PP GSP P P PPA P G P PP G+PG P
Sbjct: 304 PPLGSP-----PGPKPGFAPPPAPPPPPPPMIGIP----PPPPPVGFGSPG-------TP 347
Query: 175 LARSPPQVPSRPPSLSQP 192
SPP P P + P
Sbjct: 348 PPPSPPSFPPHPDFAAPP 365
Score = 36.6 bits (83), Expect = 0.016
Identities = 31/111 (27%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Query: 37 PQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPD------SVVPPPRSP 90
P I +P G G + P P PD PPP P ++ PPP S
Sbjct: 327 PPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPH-PDFAAPPPPPPPPAADYPTLPPPPLSQ 385
Query: 91 DSVVPPPGSPDSVVLPPRSPDSVVPP-PGSPDSVVLPPRSPDSVVPPARSP 140
+ PP P PP P PP G+ +PP D+ P + P
Sbjct: 386 PTGGAPPPPP-----PPPPPGPPPPPFTGADGQPAIPPPLSDTTKPKSSLP 431
Score = 34.7 bits (78), Expect = 0.060
Identities = 33/117 (28%), Positives = 39/117 (33%), Gaps = 13/117 (11%)
Query: 82 SVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP--PARS 139
S PPP DS P S LPP + P S + P+ V P P +
Sbjct: 244 SSYPPPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPA 303
Query: 140 PDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQV----PSRPPSLSQP 192
P G G APP A P + + PP V P PP S P
Sbjct: 304 PPLGSPPGPKPGFAPPPAPPPPPPP-------MIGIPPPPPPVGFGSPGTPPPPSPP 353
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 56.2 bits (134), Expect = 2e-08
Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 14/125 (11%)
Query: 70 PDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPD----SVVPPPGSPDSVVL 125
P PPPG P P + PPPG P PP D S PPG P
Sbjct: 191 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGDNKSQSARSPPGKPQGP-- 245
Query: 126 PPR---SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQV 182
PP+ P PP P G + PP + +G P G R +RSPP
Sbjct: 246 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSR--SSRSPPGK 303
Query: 183 PSRPP 187
P PP
Sbjct: 304 PQGPP 308
Score = 50.8 bits (120), Expect = 8e-07
Identities = 50/162 (30%), Positives = 58/162 (35%), Gaps = 33/162 (20%)
Query: 36 KPQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRS---PDS 92
KPQ P P G QG P + SRSP PG P PPP+ P
Sbjct: 149 KPQGPPPP------GKPQGPP-PQGDNKSRSSRSP------PGKPQG--PPPQGGNQPQG 193
Query: 93 VVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSL 152
PPPG P + PPPG P PP D+ ARSP G P+
Sbjct: 194 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGDNKSQSARSP-----PGKPQGP 245
Query: 153 APPAAARAEGAPGWAGR-------WGRVPLARSPPQVPSRPP 187
P + +G P G+ G P PP P PP
Sbjct: 246 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 287
Score = 49.7 bits (117), Expect = 2e-06
Identities = 47/155 (30%), Positives = 54/155 (34%), Gaps = 19/155 (12%)
Query: 36 KPQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVP 95
KPQ P P QG + P P P P G+ PPP P P
Sbjct: 46 KPQGPPSPPGKPQGPPPQGGNQPQGPPP--PPGKPQGPPPQGGNKPQGPPPPGKPQG--P 101
Query: 96 PPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPR---SPDSVVPPARSPDSGGRAGSPRSL 152
PP S RSP S PPG P PP+ P PP P G +
Sbjct: 102 PPQGDKS-----RSPRS---PPGKPQGP--PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 151
Query: 153 APPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 187
PP + +G P R +RSPP P PP
Sbjct: 152 GPPPPGKPQGPPPQGDNKSR--SSRSPPGKPQGPP 184
Score = 49.3 bits (116), Expect = 2e-06
Identities = 47/168 (27%), Positives = 58/168 (34%), Gaps = 30/168 (17%)
Query: 40 IPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVP-----------PPGSPDSVVPPPR 88
+ V LL SS S L + +P P PPG P PPP+
Sbjct: 6 LSVALLALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQG--PPPQ 63
Query: 89 ---SPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPP------RSPDSVVPPARS 139
P PPPG P + PPPG P PP RSP S PP +
Sbjct: 64 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGDKSRSPRS--PPGKP 118
Query: 140 PDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 187
+ G+ PP + +G P + G P PP P PP
Sbjct: 119 QGPPPQGGNQPQGPPPPPGKPQGPP---PQGGNKPQGPPPPGKPQGPP 163
Score = 48.9 bits (115), Expect = 3e-06
Identities = 40/129 (31%), Positives = 44/129 (34%), Gaps = 22/129 (17%)
Query: 70 PDSVVPPPGSPDSVVP----------PPRSPDSVVPPPGSPD-SVVLPPRSPDSVVPPPG 118
P PPPG P P PP P P GS S PP P PPP
Sbjct: 253 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQG--PPPQ 310
Query: 119 SPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARS 178
+ PP PP P G + PP + +G P G R ARS
Sbjct: 311 GGNQPQGPP-------PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSR--SARS 361
Query: 179 PPQVPSRPP 187
PP P PP
Sbjct: 362 PPGKPQGPP 370
Score = 47.8 bits (112), Expect = 7e-06
Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 19/129 (14%)
Query: 67 SRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPP---RSPDSVVPPPGSPDSV 123
SRSP S PPG P PPP+ + PP P PP + PPPG P
Sbjct: 108 SRSPRS---PPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG- 161
Query: 124 VLPP-----RSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARS 178
PP +S S PP + + G+ PP + +G P + G P
Sbjct: 162 --PPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP---PQGGNKPQGPP 216
Query: 179 PPQVPSRPP 187
PP P PP
Sbjct: 217 PPGKPQGPP 225
Score = 45.1 bits (105), Expect = 4e-05
Identities = 39/127 (30%), Positives = 47/127 (37%), Gaps = 35/127 (27%)
Query: 70 PDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPD---SVVPPPGSPDSVVLP 126
P PPPG P P + PPPG P PP+ S PPG P P
Sbjct: 315 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGGSKSRSARSPPGKPQG---P 369
Query: 127 PR----SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQ- 181
P+ +P PPA G+P+ P A + +G P PPQ
Sbjct: 370 PQQEGNNPQGPPPPA--------GGNPQQPQAPPAGQPQGPP-------------RPPQG 408
Query: 182 -VPSRPP 187
PSRPP
Sbjct: 409 GRPSRPP 415
Score = 44.3 bits (103), Expect = 8e-05
Identities = 38/131 (29%), Positives = 44/131 (33%), Gaps = 26/131 (19%)
Query: 70 PDSVVPPPGSPDSVVP----------PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGS 119
P PPPG P P PP P PP D+ RS PPG
Sbjct: 129 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGDNKSRSSRS------PPGK 179
Query: 120 PDSVVLPPR---SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA 176
P PP+ P PP P G + PP + +G P + A
Sbjct: 180 PQGP--PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD--NKSQSA 235
Query: 177 RSPPQVPSRPP 187
RSPP P PP
Sbjct: 236 RSPPGKPQGPP 246
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 56.2 bits (134), Expect = 2e-08
Identities = 47/156 (30%), Positives = 57/156 (36%), Gaps = 11/156 (7%)
Query: 39 AIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPG 98
A+ + +L + G P T V S SPD +P + PPP P PG
Sbjct: 498 AVSIEILPVAVATPSGGDAP-TPGVPTGSPSPDLAPAAEPAPGAAPPPPP------PLPG 550
Query: 99 SPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAA 158
P PP +P P PGSP+ PP D PP P G G PP
Sbjct: 551 LPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPP 610
Query: 159 RAEGAPGWAGR----WGRVPLARSPPQVPSRPPSLS 190
G P GR G A+ P Q R P L+
Sbjct: 611 PPGGPPDALGRRDSELGPGVKAKKPIQTKFRMPLLN 646
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 55.1 bits (131), Expect = 4e-08
Identities = 49/151 (32%), Positives = 61/151 (40%), Gaps = 20/151 (13%)
Query: 36 KPQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSV-----VPPPGSPDSVVPPPRSP 90
KP P P+L QGS P++ V LP V PPP SP PPP +P
Sbjct: 1223 KPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSP-KPPPPPTAP 1281
Query: 91 DSVVPPPGSPDSVVLPPRSPD-------SVVPPPGSPDSVVLPPRSPDSVVPPA----RS 139
V G P P +P ++ PPG+P S+ P P S PA
Sbjct: 1282 KPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAK 1341
Query: 140 PDSGGRAGSPRSLAPPAAARAEGA-PGWAGR 169
P A + + APPA EGA PG + R
Sbjct: 1342 PPRAAAAAAAAAAAPPAP--PEGASPGDSAR 1370
Score = 43.9 bits (102), Expect = 1e-04
Identities = 49/168 (29%), Positives = 60/168 (35%), Gaps = 21/168 (12%)
Query: 41 PVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSP---DSVVPPPRSPDSVVPPP 97
P PL V +G G P++ P P PPP P D PP + PP
Sbjct: 1164 PPPLSVYHNGTGTVRRRPASEQAGPPELPPP---PPPAEPPPTDLAHLPP-----LPPPE 1215
Query: 98 GSPDSVVLPPRSPDSVVPPP-----GSPD----SVVLP-PRSPDSVVPPARSPDSGGRAG 147
G PP SP V+ P GSP V LP P SP+ P +
Sbjct: 1216 GEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKPP 1275
Query: 148 SPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLSS 195
P + P A A G AG AR PP ++PP L +
Sbjct: 1276 PPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGA 1323
Score = 38.9 bits (89), Expect = 0.003
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 13/123 (10%)
Query: 72 SVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPD 131
SV P PG P V+PP S PP +P P SP ++ P G + +P
Sbjct: 755 SVPPVPGKPRQVLPPGTSH---FTPPQTPTKT--RPGSPQALGGPHGPAPATAKVKPTPQ 809
Query: 132 SVVPPAR--SPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSL 189
+ P R SP S ++ + R A EG G A +PP VP+ P+L
Sbjct: 810 LLPPTERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAP------GPAPPPVPTAVPTL 863
Query: 190 SQP 192
P
Sbjct: 864 CLP 866
Score = 27.7 bits (60), Expect = 7.4
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 8/100 (8%)
Query: 66 PSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPD----SVVLPPRSPDSVVPPPGSPD 121
P+ + V P P ++PP P S P SP + VLP V P P
Sbjct: 797 PAPATAKVKPTP----QLLPPTERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAPGPA 852
Query: 122 SVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAE 161
+P P +PP + G SL AA+ +E
Sbjct: 853 PPPVPTAVPTLCLPPEADAEPGRPKKRAHSLNRYAASDSE 892
Score = 27.7 bits (60), Expect = 7.4
Identities = 45/201 (22%), Positives = 60/201 (29%), Gaps = 34/201 (16%)
Query: 37 PQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDS------VVPPPGSPDSVVPPPRSP 90
P A+P L + G HS+ + S +VP P + V
Sbjct: 857 PTAVPTLCLPPEADAEPGRPKKRAHSLNRYAASDSEPERDELLVPAAAGPYATVQRRVGR 916
Query: 91 DSVVPPPGSPD-------SVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPD-- 141
V P D S + PR PPP S + D VP A D
Sbjct: 917 SHSVRAPAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSALASANLADEPVPDAEPEDGL 976
Query: 142 -----------------SGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPS 184
G AGS +S+A + G G A R R P P+ S
Sbjct: 977 LGVRAQCRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRAAR--RPPEGHPTPRPAS 1034
Query: 185 RPPSLSQPLSSRVSLYELLFP 205
P + + V E + P
Sbjct: 1035 PEPGRVATVLASVKHKEAIGP 1055
>gi|15529996 son of sevenless homolog 1 [Homo sapiens]
Length = 1333
Score = 55.1 bits (131), Expect = 4e-08
Identities = 52/170 (30%), Positives = 67/170 (39%), Gaps = 28/170 (16%)
Query: 59 STHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVV---------LPPRS 109
S S+ L + + VPPP VPP R P+S P SP ++ +PPR
Sbjct: 1134 SVSSISLTKGTDEVPVPPP------VPPRRRPESA-PAESSPSKIMSKHLDSPPAIPPRQ 1186
Query: 110 PDSVVPPP----GSPDSVVLPPRSPDSVVP--PARSPDSGGRAGSPRSLAPPAAARAEGA 163
P S P S+ PP SP + P P R+PD + SP L PP +
Sbjct: 1187 PTSKAYSPRYSISDRTSISDPPESPPLLPPREPVRTPDVF--SSSPLHLQPPPLGKKSDH 1244
Query: 164 PGWAGRWGRVPLARSPPQVPS----RPPSLSQPLSSRVSLYELLFPSWPP 209
P PPQ PS R S PL+ V L+ + P PP
Sbjct: 1245 GNAFFPNSPSPFTPPPPQTPSPHGTRRHLPSPPLTQEVDLHSIAGPPVPP 1294
Score = 32.0 bits (71), Expect = 0.39
Identities = 42/157 (26%), Positives = 60/157 (38%), Gaps = 39/157 (24%)
Query: 65 LPSRSPDSVVPPPGSPDS-VVPPPRS-------------PDSVVPPPGSPDSVVLP---- 106
+P +S P SP + + PPP S D P S D+V +
Sbjct: 1068 IPESETESTASAPNSPRTPLTPPPASGASSTTDVCSVFDSDHSSPFHSSNDTVFIQVTLP 1127
Query: 107 --PRSPD-SVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSL------APPA- 156
PRS S + D V +PP VPP R P+S SP + +PPA
Sbjct: 1128 HGPRSASVSSISLTKGTDEVPVPPP-----VPPRRRPESAPAESSPSKIMSKHLDSPPAI 1182
Query: 157 AARAEGAPGWAGRWG---RVPLA---RSPPQVPSRPP 187
R + ++ R+ R ++ SPP +P R P
Sbjct: 1183 PPRQPTSKAYSPRYSISDRTSISDPPESPPLLPPREP 1219
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 54.7 bits (130), Expect = 6e-08
Identities = 44/135 (32%), Positives = 57/135 (42%), Gaps = 13/135 (9%)
Query: 66 PSRSPDSVVP--PPGSPD---SVVPPPRSPDSVVPPPGS--PDSVVLPPRSPDSVVPPPG 118
P SP P PP SP S PP ++P S+ PP P PP SP S PPP
Sbjct: 442 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP-SATPPPQ 500
Query: 119 SPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARS 178
+P + PP PP ++P + +PPA+ + + PLA
Sbjct: 501 APPPLAAPPL--QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP 558
Query: 179 PPQVPSRPPSLSQPL 193
PPQ PP L+ PL
Sbjct: 559 PPQA---PPVLAAPL 570
Score = 52.0 bits (123), Expect = 4e-07
Identities = 59/179 (32%), Positives = 76/179 (42%), Gaps = 33/179 (18%)
Query: 30 SMGYLMKPQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRS 89
S+ L P A P TS G + +THS LPS PP SP + PPP++
Sbjct: 350 SLQTLPSPPATPPSQATTSLG---SPTLQATHSF-LPS--------PPLSPLA-TPPPQA 396
Query: 90 PDSVVPPP--GSPDSVVLPPRSPDSVVPPPGSPDSVVL--------PPRSPD---SVVPP 136
P ++ PP P PP SP P P +P+++ + PP SP PP
Sbjct: 397 PPALALPPLQAPPSPPASPPLSP-LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPP 455
Query: 137 ARSPDSGGRAGSPRSLAPP--AAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPL 193
A P S + +P S APP AA + P P A PPQ P PP + PL
Sbjct: 456 ASPPVS--PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP--PPLAAPPL 510
Score = 45.4 bits (106), Expect = 3e-05
Identities = 54/167 (32%), Positives = 69/167 (41%), Gaps = 20/167 (11%)
Query: 58 PSTHSVVLPSRSPDSVVPP-PGSPDSVV----PPPRSPDSVVPPPGSP------DSVVLP 106
P + S+ +P + PP P +P S+ PP P GSP + P
Sbjct: 325 PHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSP 384
Query: 107 PRSPDSVVPPPGSPDSVVLPP-RSPDSVVPPARSPDSGGRAGSPRSLAPPA-AARAEGAP 164
P SP PPP +P ++ LPP ++P S PPA P S SP+ AP A A AP
Sbjct: 385 PLSP-LATPPPQAPPALALPPLQAPPS--PPASPPLSPLATPSPQ--APNALAVHLLQAP 439
Query: 165 GWAGRWGRVPLARSPPQVPSRPPSLSQPLSSRVSLY--ELLFPSWPP 209
V SPP P PS + P + SL L P PP
Sbjct: 440 FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 486
Score = 40.4 bits (93), Expect = 0.001
Identities = 59/193 (30%), Positives = 70/193 (36%), Gaps = 56/193 (29%)
Query: 38 QAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPP 97
QA+P P +S GQ PS + P +P PP P P + P S PP
Sbjct: 529 QALPSP---PASFPGQAPFSPSASLPMSPLATP----PPQAPPVLAAPLLQVPPS---PP 578
Query: 98 GSPDSVVLPPRSPDSVVPPPGSPDSVVLPPR-----SPDSVVPPARSPDS---------- 142
SP + PR P P PG PD+ V PR +P PP+RSP S
Sbjct: 579 ASP--TLQAPRRP----PTPG-PDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGH 631
Query: 143 -------------------GGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA-RSPPQV 182
GG A SP PP A A P R PLA R P
Sbjct: 632 SSSATSTPEELRGYDSGPEGGAAASP----PPDAELAACHPAAWSRGPAPPLAFRGAPGA 687
Query: 183 PSRPPSLSQPLSS 195
P P + P S+
Sbjct: 688 PLPWPPATGPGSA 700
Score = 32.3 bits (72), Expect = 0.30
Identities = 35/123 (28%), Positives = 43/123 (34%), Gaps = 10/123 (8%)
Query: 67 SRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLP 126
SRS S P SP P R P P L P V PP + P
Sbjct: 239 SRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP 298
Query: 127 PRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRP 186
S P SP + ++ +P +L PA + PL +PP PS P
Sbjct: 299 LSSSPLATP---SPSAALQSQAPPTL--PATPHSSSLTCQLA----TPLPLAPPS-PSAP 348
Query: 187 PSL 189
PSL
Sbjct: 349 PSL 351
Score = 30.4 bits (67), Expect = 1.1
Identities = 43/158 (27%), Positives = 54/158 (34%), Gaps = 24/158 (15%)
Query: 43 PLLVTSSGIGQGSSWPS-------THSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVP 95
PL + GIG G++ P T S SR+P S P G + P + V
Sbjct: 57 PLAERAGGIG-GATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVS 115
Query: 96 PPGSPDSVVLPPRSPD-----SVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPR 150
PG P S + P RS ++ AR SG G+P
Sbjct: 116 SPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRS--ALSAGARRDTSGPTPGTP- 172
Query: 151 SLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 188
PA AR A G V L R P RPP+
Sbjct: 173 ---SPAMARRSRAAG-----TEVGLPRPAPSARPRPPT 202
Score = 30.4 bits (67), Expect = 1.1
Identities = 37/156 (23%), Positives = 50/156 (32%), Gaps = 12/156 (7%)
Query: 41 PVPLLVTSSGIGQGSSWPSTHS--------VVLPSRSPDSVVPPPGSPDSVVPPPRSPDS 92
P P L G WP + + P+S P PG+ D P S
Sbjct: 675 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGK 734
Query: 93 VVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVV--LPPRSPDSVVPPARSPDSGGRAGSPR 150
G+ S P ++ +P SVV L R+ + SGG G
Sbjct: 735 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 794
Query: 151 SLAPPAAARAEGAPGWAGRWGRV--PLARSPPQVPS 184
ARA + GRW + PL S + S
Sbjct: 795 GGGVTGGARAALSDAELGRWAELLSPLDESRASITS 830
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 54.7 bits (130), Expect = 6e-08
Identities = 44/135 (32%), Positives = 57/135 (42%), Gaps = 13/135 (9%)
Query: 66 PSRSPDSVVP--PPGSPD---SVVPPPRSPDSVVPPPGS--PDSVVLPPRSPDSVVPPPG 118
P SP P PP SP S PP ++P S+ PP P PP SP S PPP
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP-SATPPPQ 461
Query: 119 SPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARS 178
+P + PP PP ++P + +PPA+ + + PLA
Sbjct: 462 APPPLAAPPL--QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP 519
Query: 179 PPQVPSRPPSLSQPL 193
PPQ PP L+ PL
Sbjct: 520 PPQA---PPVLAAPL 531
Score = 52.0 bits (123), Expect = 4e-07
Identities = 59/179 (32%), Positives = 76/179 (42%), Gaps = 33/179 (18%)
Query: 30 SMGYLMKPQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRS 89
S+ L P A P TS G + +THS LPS PP SP + PPP++
Sbjct: 311 SLQTLPSPPATPPSQATTSLG---SPTLQATHSF-LPS--------PPLSPLA-TPPPQA 357
Query: 90 PDSVVPPP--GSPDSVVLPPRSPDSVVPPPGSPDSVVL--------PPRSPD---SVVPP 136
P ++ PP P PP SP P P +P+++ + PP SP PP
Sbjct: 358 PPALALPPLQAPPSPPASPPLSP-LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPP 416
Query: 137 ARSPDSGGRAGSPRSLAPP--AAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPL 193
A P S + +P S APP AA + P P A PPQ P PP + PL
Sbjct: 417 ASPPVS--PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP--PPLAAPPL 471
Score = 40.4 bits (93), Expect = 0.001
Identities = 59/193 (30%), Positives = 70/193 (36%), Gaps = 56/193 (29%)
Query: 38 QAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPP 97
QA+P P +S GQ PS + P +P PP P P + P S PP
Sbjct: 490 QALPSP---PASFPGQAPFSPSASLPMSPLATP----PPQAPPVLAAPLLQVPPS---PP 539
Query: 98 GSPDSVVLPPRSPDSVVPPPGSPDSVVLPPR-----SPDSVVPPARSPDS---------- 142
SP + PR P P PG PD+ V PR +P PP+RSP S
Sbjct: 540 ASP--TLQAPRRP----PTPG-PDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGH 592
Query: 143 -------------------GGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA-RSPPQV 182
GG A SP PP A A P R PLA R P
Sbjct: 593 SSSATSTPEELRGYDSGPEGGAAASP----PPDAELAACHPAAWSRGPAPPLAFRGAPGA 648
Query: 183 PSRPPSLSQPLSS 195
P P + P S+
Sbjct: 649 PLPWPPATGPGSA 661
Score = 38.9 bits (89), Expect = 0.003
Identities = 51/177 (28%), Positives = 65/177 (36%), Gaps = 35/177 (19%)
Query: 63 VVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDS---------- 112
V P + + P S P P +P S PP S ++ PP +P S
Sbjct: 276 VTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPP-SLQTLPSPPATPPSQATTSLGSPT 334
Query: 113 ----------------VVPPPGSPDSVVLPP-RSPDSVVPPARSPDSGGRAGSPRSLAPP 155
PPP +P ++ LPP ++P S PPA P S SP+ AP
Sbjct: 335 LQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPS--PPASPPLSPLATPSPQ--APN 390
Query: 156 A-AARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLSSRVSLY--ELLFPSWPP 209
A A AP V SPP P PS + P + SL L P PP
Sbjct: 391 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 447
Score = 37.7 bits (86), Expect = 0.007
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 85 PPPRSPDSVVP-PPGSPDSVVLPPRSPDS--VVPPPGSPDSVVLPPRSPDSVVPPARSPD 141
P R+P + P PPGSP PP +P + V+ G+ L R+ + A P+
Sbjct: 17 PAARAPGLLTPRPPGSPRPP--PPVTPAALRVLGAAGAVGRKPLAERAGG--IGGATIPE 72
Query: 142 SGGRAGSPRSLAPPAAARAEGAP 164
S RAG R+ PPA+ R E AP
Sbjct: 73 SAPRAGPTRTSRPPASGRGERAP 95
Score = 37.4 bits (85), Expect = 0.009
Identities = 40/138 (28%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 67 SRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPP-----PGSPD 121
SRS S P SP P R P P L P V PP P
Sbjct: 230 SRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP 289
Query: 122 SVVLPPRSPDSVVPPARS-PDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRV------P 174
P +P PP+ S P S SP + P A + G+P + P
Sbjct: 290 LSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSP 349
Query: 175 LARSPPQVPSRPPSLSQP 192
LA PPQ PP+L+ P
Sbjct: 350 LATPPPQA---PPALALP 364
Score = 37.0 bits (84), Expect = 0.012
Identities = 35/129 (27%), Positives = 44/129 (34%), Gaps = 25/129 (19%)
Query: 65 LPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVV 124
L + P V PP + P S P P +P S PP PP P
Sbjct: 268 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQAT 327
Query: 125 LPPRSP-----DSVVP-PARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARS 178
SP S +P P SP +P APPA A +P ++
Sbjct: 328 TSLGSPTLQATHSFLPSPPLSP-----LATPPPQAPPALA--------------LPPLQA 368
Query: 179 PPQVPSRPP 187
PP P+ PP
Sbjct: 369 PPSPPASPP 377
Score = 30.4 bits (67), Expect = 1.1
Identities = 37/156 (23%), Positives = 50/156 (32%), Gaps = 12/156 (7%)
Query: 41 PVPLLVTSSGIGQGSSWPSTHS--------VVLPSRSPDSVVPPPGSPDSVVPPPRSPDS 92
P P L G WP + + P+S P PG+ D P S
Sbjct: 636 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGK 695
Query: 93 VVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVV--LPPRSPDSVVPPARSPDSGGRAGSPR 150
G+ S P ++ +P SVV L R+ + SGG G
Sbjct: 696 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 755
Query: 151 SLAPPAAARAEGAPGWAGRWGRV--PLARSPPQVPS 184
ARA + GRW + PL S + S
Sbjct: 756 GGGVTGGARAALSDAELGRWAELLSPLDESRASITS 791
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 54.3 bits (129), Expect = 7e-08
Identities = 61/190 (32%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 33 YLMKPQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSV------VPP------PGSP 80
+L++ P P + +S P + S PS++P S+ VPP P SP
Sbjct: 659 HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP 718
Query: 81 DSVVPPPRSPDSVVPPP--GSPDSVVLPPRSPDSVVPPPGSPDSVVLPP-RSPDSVVPPA 137
+ PPP++P + PP P PP SP S PPP P + PP + P S PPA
Sbjct: 719 SA-TPPPQAPPPLAAPPLQVPPSPPASPPMSP-SATPPPRVPPLLAAPPLQVPPS--PPA 774
Query: 138 RSPDSGGRAGSPRSLAPPAAAR---------AEGAPGWA-----GRWGRVPLARSPPQVP 183
P S P APPA A PG A PLA PPQ
Sbjct: 775 SLPMS--PLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA- 831
Query: 184 SRPPSLSQPL 193
PP L+ PL
Sbjct: 832 --PPVLAAPL 839
Score = 50.4 bits (119), Expect = 1e-06
Identities = 53/183 (28%), Positives = 72/183 (39%), Gaps = 20/183 (10%)
Query: 37 PQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVV-P 95
P P PL S+ + + H P +P + PP SP PPP +P S+ P
Sbjct: 539 PSLAPPPLQTASAPL------TTPHLETPPCPAPCPLQAPP-SP-LTTPPPETPSSIATP 590
Query: 96 PPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPP 155
PP +P ++ PP + PP SP + P P +PP ++P S + LA P
Sbjct: 591 PPQAPPALASPPLQ--GLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATP 648
Query: 156 A-------AARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLSSRVSLY--ELLFPS 206
+ A AP V SPP P PS + P + SL L P
Sbjct: 649 SPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPP 708
Query: 207 WPP 209
PP
Sbjct: 709 SPP 711
Score = 48.9 bits (115), Expect = 3e-06
Identities = 50/170 (29%), Positives = 66/170 (38%), Gaps = 18/170 (10%)
Query: 38 QAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVP-PPGSPDSVVPPPRSPDSVVPP 96
QA P PL + P + + P +P PP SP + PP P +PP
Sbjct: 570 QAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPP 629
Query: 97 PGSPDSVVLPPRSPDSVVPPPGSPDSVVL--------PPRSPD---SVVPPARSPDSGGR 145
+P S P P P +P+++ + PP SP PPA P S
Sbjct: 630 LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS--P 687
Query: 146 AGSPRSLAPP--AAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPL 193
+ +P S APP AA + P P A PPQ P PP + PL
Sbjct: 688 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP--PPLAAPPL 735
Score = 46.2 bits (108), Expect = 2e-05
Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 42/203 (20%)
Query: 35 MKPQAIPVPLLVTSSGIGQGSSWP-----STHSVVLPSRSPDSVVPP-----PGSPDSVV 84
++P + P + +G SS P + + P PD+ P P SP
Sbjct: 280 LRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLAT 339
Query: 85 PPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPP-RSPDSV--VPPARSPD 141
P P +P P P +P S+ P P PP +P S+ PP ++P S+ +PP + P
Sbjct: 340 PLPLAP----PSPSAPPSLQTLPSPP--ATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPH 393
Query: 142 SGGRAGSPRSLAPPA--------AARAEGAPGWAGRWGRVPLARSPPQV----PSRP--- 186
S SP APP+ A + G+P + ++ Q PSRP
Sbjct: 394 S---LTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPAST 450
Query: 187 PSLSQPLSSRVSLYELLFPSWPP 209
P S PL + +SL P+ PP
Sbjct: 451 PPDSPPLQAPLSL-----PASPP 468
Score = 40.4 bits (93), Expect = 0.001
Identities = 59/193 (30%), Positives = 70/193 (36%), Gaps = 56/193 (29%)
Query: 38 QAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPP 97
QA+P P +S GQ PS + P +P PP P P + P S PP
Sbjct: 798 QALPSP---PASFPGQAPFSPSASLPMSPLATP----PPQAPPVLAAPLLQVPPS---PP 847
Query: 98 GSPDSVVLPPRSPDSVVPPPGSPDSVVLPPR-----SPDSVVPPARSPDS---------- 142
SP + PR P P PG PD+ V PR +P PP+RSP S
Sbjct: 848 ASP--TLQAPRRP----PTPG-PDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGH 900
Query: 143 -------------------GGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA-RSPPQV 182
GG A SP PP A A P R PLA R P
Sbjct: 901 SSSATSTPEELRGYDSGPEGGAAASP----PPDAELAACHPAAWSRGPAPPLAFRGAPGA 956
Query: 183 PSRPPSLSQPLSS 195
P P + P S+
Sbjct: 957 PLPWPPATGPGSA 969
Score = 38.5 bits (88), Expect = 0.004
Identities = 37/123 (30%), Positives = 43/123 (34%), Gaps = 7/123 (5%)
Query: 67 SRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLP 126
SRS S P SP P R P P L P V PP + L
Sbjct: 239 SRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVT-PPRKDAAPALG 297
Query: 127 PRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRP 186
P S + P+ S P + A P A +P A PL +PP PS P
Sbjct: 298 PLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLA-----TPLPLAPPS-PSAP 351
Query: 187 PSL 189
PSL
Sbjct: 352 PSL 354
Score = 37.0 bits (84), Expect = 0.012
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 13/124 (10%)
Query: 65 LPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVV 124
L + P V PP + P S P P + +PP PD+ +P
Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPP--PDNA----ATPLPAT 330
Query: 125 LPPRSPDSVVPPARSPDSGGRAGSPRSL-APPAAARAEGAPGWAGRWGRVPLARSPPQVP 183
LPP SP P +P S S ++L +PPA ++ P P ++PP +
Sbjct: 331 LPP-SPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMT-----TPPMQAPPSLQ 384
Query: 184 SRPP 187
+ PP
Sbjct: 385 TIPP 388
Score = 30.4 bits (67), Expect = 1.1
Identities = 43/158 (27%), Positives = 54/158 (34%), Gaps = 24/158 (15%)
Query: 43 PLLVTSSGIGQGSSWPS-------THSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVP 95
PL + GIG G++ P T S SR+P S P G + P + V
Sbjct: 57 PLAERAGGIG-GATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVS 115
Query: 96 PPGSPDSVVLPPRSPD-----SVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPR 150
PG P S + P RS ++ AR SG G+P
Sbjct: 116 SPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRS--ALSAGARRDTSGPTPGTP- 172
Query: 151 SLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 188
PA AR A G V L R P RPP+
Sbjct: 173 ---SPAMARRSRAAG-----TEVGLPRPAPSARPRPPT 202
Score = 30.4 bits (67), Expect = 1.1
Identities = 37/156 (23%), Positives = 50/156 (32%), Gaps = 12/156 (7%)
Query: 41 PVPLLVTSSGIGQGSSWPSTHS--------VVLPSRSPDSVVPPPGSPDSVVPPPRSPDS 92
P P L G WP + + P+S P PG+ D P S
Sbjct: 944 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGK 1003
Query: 93 VVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVV--LPPRSPDSVVPPARSPDSGGRAGSPR 150
G+ S P ++ +P SVV L R+ + SGG G
Sbjct: 1004 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 1063
Query: 151 SLAPPAAARAEGAPGWAGRWGRV--PLARSPPQVPS 184
ARA + GRW + PL S + S
Sbjct: 1064 GGGVTGGARAALSDAELGRWAELLSPLDESRASITS 1099
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 54.3 bits (129), Expect = 7e-08
Identities = 51/164 (31%), Positives = 62/164 (37%), Gaps = 23/164 (14%)
Query: 40 IPVPLLVTSS--GIGQGSSWPSTHSVVL-----PS----RSPDSVVPPPGSPDSVVPPPR 88
+ V LL SS + + S + S++ PS P PPPG P P
Sbjct: 6 LSVALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGG 65
Query: 89 SPDSVVPPPGSPDSVVLPPRSPDSVVP--PPGSPDSVVLPPR---SPDSVVPPARSPDSG 143
+ PPPG P PP+ S P PPG P PP+ P PP P
Sbjct: 66 NKPQGPPPPGKPQGP--PPQGDKSRSPRSPPGKPQGP--PPQGGNQPQGPPPPPGKPQGP 121
Query: 144 GRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 187
G R PP + +G P G R P RSPP P PP
Sbjct: 122 PPQGGNRPQGPPPPGKPQGPPP-QGDKSRSP--RSPPGKPQGPP 162
Score = 48.9 bits (115), Expect = 3e-06
Identities = 41/131 (31%), Positives = 46/131 (35%), Gaps = 27/131 (20%)
Query: 70 PDSVVPPPGSPDSVVP----------PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGS 119
P PPPG P P PP P PPP S RS S PPG
Sbjct: 169 PQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQG--PPPQGDKS-----RSSQS---PPGK 218
Query: 120 PDSVVLPPR---SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA 176
P PP+ P PP P G + PP + +G P G + A
Sbjct: 219 PQGP--PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGG--SKSQSA 274
Query: 177 RSPPQVPSRPP 187
RSPP P PP
Sbjct: 275 RSPPGKPQGPP 285
Score = 45.1 bits (105), Expect = 4e-05
Identities = 39/131 (29%), Positives = 47/131 (35%), Gaps = 28/131 (21%)
Query: 70 PDSVVPPPGSPDSVVP----------PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGS 119
P PPPG P P PP P PPP S RSP S PPG
Sbjct: 108 PQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQG--PPPQGDKS-----RSPRS---PPGK 157
Query: 120 PDSVVLPPR---SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA 176
P PP+ P PP P G + PP + +G P + + +
Sbjct: 158 PQGP--PPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPP---PQGDKSRSS 212
Query: 177 RSPPQVPSRPP 187
+SPP P PP
Sbjct: 213 QSPPGKPQGPP 223
Score = 44.7 bits (104), Expect = 6e-05
Identities = 37/124 (29%), Positives = 44/124 (35%), Gaps = 29/124 (23%)
Query: 70 PDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRS----PDSVVPPPGSPDSVVL 125
P PPPG P P + PPPG P PP S PPG P
Sbjct: 230 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPAQGGSKSQSARSPPGKPQG--- 283
Query: 126 PPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQ--VP 183
P + P P +GG P++ P A + +G P PPQ P
Sbjct: 284 -PPQQEGNNPQGPPPPAGGNPQQPQA---PPAGQPQGPP-------------RPPQGGRP 326
Query: 184 SRPP 187
SRPP
Sbjct: 327 SRPP 330
Score = 43.9 bits (102), Expect = 1e-04
Identities = 44/158 (27%), Positives = 54/158 (34%), Gaps = 27/158 (17%)
Query: 36 KPQAIPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVP 95
KPQ P P G + S P P P G+ PPP P
Sbjct: 67 KPQGPPPP----GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 122
Query: 96 PPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPP------RSPDSVVPPARSPDSGGRAGSP 149
P G P+ P PPPG P PP RSP S PP + + G+
Sbjct: 123 PQGGN-----RPQGP----PPPGKPQG---PPPQGDKSRSPRS--PPGKPQGPPPQGGNQ 168
Query: 150 RSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 187
PP + +G P + G+ P PP P PP
Sbjct: 169 PQGPPPPPGKPQGPP---PQGGKKPQGPPPPGKPQGPP 203
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 54.3 bits (129), Expect = 7e-08
Identities = 41/149 (27%), Positives = 50/149 (33%), Gaps = 3/149 (2%)
Query: 40 IPVPLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGS-PDSVVPPPRSPDSVVPPPG 98
+ V LL SS S L + +P P G+ P PPP P P G
Sbjct: 6 LSVALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGG 65
Query: 99 SPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAA 158
+ PP P P S PP P P P G + PP
Sbjct: 66 NKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPG 125
Query: 159 RAEGAPGWAGRWGRVPLARSPPQVPSRPP 187
+ +G P G + ARSPP P PP
Sbjct: 126 KPQGPPAQGG--SKSQSARSPPGKPQGPP 152
Score = 41.2 bits (95), Expect = 6e-04
Identities = 42/136 (30%), Positives = 50/136 (36%), Gaps = 40/136 (29%)
Query: 67 SRSPDSVVPPPGSPDSVVPPPRSPDSVVPPP--GSPDSVVLPPRSPD-----------SV 113
SRSP S PPG P PPP+ PPP G+ PP P S
Sbjct: 87 SRSPRS---PPGKPQG--PPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA 141
Query: 114 VPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRV 173
PPG P P + P P +GG P++ P A + +G P
Sbjct: 142 RSPPGKPQG----PPQQEGNNPQGPPPPAGGNPQQPQA---PPAGQPQGPP--------- 185
Query: 174 PLARSPPQ--VPSRPP 187
PPQ PSRPP
Sbjct: 186 ----RPPQGGRPSRPP 197
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 54.3 bits (129), Expect = 7e-08
Identities = 35/98 (35%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 61 HSVVLPSRSPDSVVPPPGS--PDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPG 118
H V P P VPPP + P +PPP PP +P+ PPR P + PP
Sbjct: 474 HPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPH 533
Query: 119 SPDSVVLPPRS-PDSVVPPARSPDSGGRAGSPRSLAPP 155
P + LPP S P VPP GG+ P + PP
Sbjct: 534 PPPGLGLPPASYPPPAVPP------GGQPPVPPPIPPP 565
Score = 50.8 bits (120), Expect = 8e-07
Identities = 46/156 (29%), Positives = 58/156 (37%), Gaps = 28/156 (17%)
Query: 47 TSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDS-------VVPPPRSPDSVVPPPGS 99
T+S G + S S++ +PP P + V PP P V PPP S
Sbjct: 434 TTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPAS 493
Query: 100 PDSVVLPPRSPDSVVPPPG-SPDSVVLPPRSPDS-VVPPARSPDSGGRAGSPRSLAPPAA 157
+PP +P PPP +P+ PPR P + VPP P G P S PPA
Sbjct: 494 FPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPP---GLGLPPASYPPPA- 549
Query: 158 ARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPL 193
VP PP P PP P+
Sbjct: 550 ---------------VPPGGQPPVPPPIPPPGMPPV 570
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/132 (28%), Positives = 46/132 (34%), Gaps = 13/132 (9%)
Query: 66 PSRSPDSVVPP---PGSPDSVVPPPRSPDSVVPPPGSPD----SVVLPPRSPDSVV--PP 116
PS+S + P P P P + P P P SP +VV+ P+ + PP
Sbjct: 293 PSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPP 352
Query: 117 PGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPL- 175
P P P P + PP R P G PP A P P
Sbjct: 353 PKIPKIETTHPPLPPAHPPPDRKPPLAAALGEAE---PPGPVDATDLPKVQIPPPAHPAP 409
Query: 176 ARSPPQVPSRPP 187
PP +P RPP
Sbjct: 410 VHQPPPLPHRPP 421
Score = 37.4 bits (85), Expect = 0.009
Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 6/115 (5%)
Query: 74 VPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSV 133
+PP P PP + PPG D+ LP +PPP P V PP P
Sbjct: 365 LPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQ----IPPPAHPAPVHQPPPLPHRP 420
Query: 134 VPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAG-RWGRVPLARSPP-QVPSRP 186
PP S G + + ++ + G +G +P A PP +P P
Sbjct: 421 PPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPYHP 475
Score = 37.4 bits (85), Expect = 0.009
Identities = 46/167 (27%), Positives = 53/167 (31%), Gaps = 55/167 (32%)
Query: 70 PDSVVPPPGSPDSVVPPPRSPDSVVPPPGS-----------------------------P 100
P +PPP P V PP P PPP S P
Sbjct: 397 PKVQIPPPAHPAPVHQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGP 456
Query: 101 DSVVLPPR-SPDSVVP------PPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRS-- 151
LPP P + +P PP P V PP P S PPA P + G P +
Sbjct: 457 SYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPP--PASFPPPAIPPPTPGYPPPPPTYN 514
Query: 152 ---------LAPPAAARAEGAPGWAGRWGRVPLARSPPQVP--SRPP 187
L P A PG G P + PP VP +PP
Sbjct: 515 PNFPPPPPRLPPTHAVPPHPPPG----LGLPPASYPPPAVPPGGQPP 557
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 53.9 bits (128), Expect = 1e-07
Identities = 42/131 (32%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Query: 37 PQAIPVPLLVTSSGI--GQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVV 94
PQ P++ G G GS+ P++ S P +P + PPGS P P P
Sbjct: 103 PQDSSKPVVAQGPGPAPGVGSAPPASSSA--PPATPPTSGAPPGSGPGPTPTP-PPAVTS 159
Query: 95 PPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAP 154
PPG+P PP P S VP +P PP P +V P P G G P+
Sbjct: 160 APPGAP-----PPTPPSSGVPT--TPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKM 212
Query: 155 PAAARAEGAPG 165
P + G PG
Sbjct: 213 PGGPKPGGGPG 223
Score = 51.6 bits (122), Expect = 5e-07
Identities = 42/129 (32%), Positives = 46/129 (35%), Gaps = 16/129 (12%)
Query: 73 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSP-- 130
+ PPP PPP+ P PPP P P + PP S VV P
Sbjct: 60 IPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAP 119
Query: 131 --------DSVVPPARSPDSGGRAGS---PRSLAPPAAARA-EGAPGWAGRWGRVPLARS 178
S PPA P SG GS P PPA A GAP VP +
Sbjct: 120 GVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVP--TT 177
Query: 179 PPQVPSRPP 187
PPQ PP
Sbjct: 178 PPQAGGPPP 186
Score = 51.2 bits (121), Expect = 6e-07
Identities = 38/120 (31%), Positives = 41/120 (34%), Gaps = 12/120 (10%)
Query: 78 GSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPA 137
G + PPP PPP P PP P PP P PP P P
Sbjct: 55 GPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQP----PPHPQPHQQQQPPPPPQDSSKPV 110
Query: 138 RSPDSG-----GRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 192
+ G G A S APPA GAP +G P PP V S PP P
Sbjct: 111 VAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPG---PTPTPPPAVTSAPPGAPPP 167
Score = 47.8 bits (112), Expect = 7e-06
Identities = 48/155 (30%), Positives = 57/155 (36%), Gaps = 28/155 (18%)
Query: 66 PSRSPDSVVPPPGSP-------DSVVPPPRSPDS---VV-----PPPG----SPDSVVLP 106
P + P PPP P PPP DS VV P PG P S P
Sbjct: 73 PPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP 132
Query: 107 PRSPDSVVPPPGS-PDSVVLPPRSPDSV---VPPARSPDSGGRAGSPRSLAPPAAARAEG 162
P +P + PPGS P PP + S PP P SG P++ PP A
Sbjct: 133 PATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVP 192
Query: 163 APGWAGRWGRVPLARSPPQVPSRP-----PSLSQP 192
PG + G P ++P P P LS P
Sbjct: 193 GPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTP 227
Score = 32.3 bits (72), Expect = 0.30
Identities = 36/135 (26%), Positives = 42/135 (31%), Gaps = 5/135 (3%)
Query: 43 PLLVTSSGIGQGSSWPSTHSVVLPSRSPDSVVPPPGSPDSVVP--PPRSPDSVVPPPGSP 100
P +SG GS T + S PPP P S VP PP++ PP P
Sbjct: 133 PATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVP 192
Query: 101 DSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP---PARSPDSGGRAGSPRSLAPPAA 157
P + P P G P P P P GG R PP
Sbjct: 193 GPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYH 252
Query: 158 ARAEGAPGWAGRWGR 172
+ P G GR
Sbjct: 253 QQHHQGPPPGGPGGR 267
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 53.9 bits (128), Expect = 1e-07
Identities = 41/106 (38%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 65 LPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP--PPGSPDS 122
LP+ P PPP + + P P P+S+ PPP P + LPP P P PPG P
Sbjct: 223 LPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPP--PGGLPLPPMPPTGPAPSGPPGPPQ- 279
Query: 123 VVLPPRSPDSVVPPA---RSPDSGGRAGSPRSLAPPAAARAEGAPG 165
LPP +P V PPA P SG +P + PPA APG
Sbjct: 280 --LPPPAP-GVHPPAPVVHPPASGVHPPAP-GVHPPAPGVHPPAPG 321
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/127 (33%), Positives = 49/127 (38%), Gaps = 21/127 (16%)
Query: 58 PSTHSVVLPSRSPDSVVP--PPGSPDSVVPPP----RSPDSVVPPPGS---PDSVVLPPR 108
P + LP P P PPG P +PPP P VV PP S P + + P
Sbjct: 254 PPPGGLPLPPMPPTGPAPSGPPGPPQ--LPPPAPGVHPPAPVVHPPASGVHPPAPGVHPP 311
Query: 109 SPDSVVPPPG--SPDSVVLPPR-----SPDSVVPPA---RSPDSGGRAGSPRSLAPPAAA 158
+P P PG P S V PP V PPA P G +P PP+A
Sbjct: 312 APGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAG 371
Query: 159 RAEGAPG 165
APG
Sbjct: 372 VHPQAPG 378
Score = 27.3 bits (59), Expect = 9.6
Identities = 34/135 (25%), Positives = 47/135 (34%), Gaps = 16/135 (11%)
Query: 58 PSTHSVVLPSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPP 117
P H P V PP V PPP + P P + + P++P P P
Sbjct: 341 PGVHPPAPGVHPPAPGVHPPAP--GVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAP 398
Query: 118 GSPDSVVLPPRSPD-SVVPPARSPDSGGRAGSPRSLAP--PAAARAEGAPGWAGRWGRVP 174
G + P++P PP P + G P + P P P R P
Sbjct: 399 G------MHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPML----RPP 448
Query: 175 L-ARSPPQVPSRPPS 188
L + P +P PP+
Sbjct: 449 LPSEGPGNIPPPPPT 463
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 52.8 bits (125), Expect = 2e-07
Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 41 PVPLLVTSS-GIGQGSSWPSTHSVVLPSRSPDSVVPPPGSP--DSVVPPPRSPDSVVPPP 97
P P +VT++ + + + T S +P ++ GSP S VP SP + VPPP
Sbjct: 129 PSPSVVTATTSVHESNKNIQTFSTASVGTAPPNMGASFGSPTFSSTVPSTASPMNTVPPP 188
Query: 98 GSPDSVVLPPRSPDSVVPP-PGSPDSVVLPPRSPDSVVPPARS--------PDSGGRAGS 148
P +P P +PP P P LPP P +PP S P SG +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLN 248
Query: 149 PRSLAP-PAAARAEGAP 164
P +AP PA GAP
Sbjct: 249 PPPVAPLPAGMNGSGAP 265
Score = 30.8 bits (68), Expect = 0.87
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
Query: 65 LPSRSPDSVVPP-PGSPDSVVPPPRSPDSVVPP-PGSPDSVVLPPRS------PDSVVPP 116
+PS P +PP P P PP P +PP P P LPP S P V P
Sbjct: 196 MPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPPPVAPL 255
Query: 117 PGSPDSVVLPPRSPDSVVPPARSP 140
P + P +++ P P
Sbjct: 256 PAGMNGSGAPMNLNNNLNPMFLGP 279
Score = 30.8 bits (68), Expect = 0.87
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 74 VPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSV 133
+P PG+P P P++ +P G P + + P + +P G P S + P +
Sbjct: 641 MPVPGNP----AVPGMPNAGLPGVGLPSAGL-----PGAGLPSTGLPGSAITSAGLPGAG 691
Query: 134 VPPARSPDSGG 144
+P A P +GG
Sbjct: 692 MPSAGIPSAGG 702
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 52.8 bits (125), Expect = 2e-07
Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 41 PVPLLVTSS-GIGQGSSWPSTHSVVLPSRSPDSVVPPPGSP--DSVVPPPRSPDSVVPPP 97
P P +VT++ + + + T S +P ++ GSP S VP SP + VPPP
Sbjct: 129 PSPSVVTATTSVHESNKNIQTFSTASVGTAPPNMGASFGSPTFSSTVPSTASPMNTVPPP 188
Query: 98 GSPDSVVLPPRSPDSVVPP-PGSPDSVVLPPRSPDSVVPPARS--------PDSGGRAGS 148
P +P P +PP P P LPP P +PP S P SG +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLN 248
Query: 149 PRSLAP-PAAARAEGAP 164
P +AP PA GAP
Sbjct: 249 PPPVAPLPAGMNGSGAP 265
Score = 30.8 bits (68), Expect = 0.87
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
Query: 65 LPSRSPDSVVPP-PGSPDSVVPPPRSPDSVVPP-PGSPDSVVLPPRS------PDSVVPP 116
+PS P +PP P P PP P +PP P P LPP S P V P
Sbjct: 196 MPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPPPVAPL 255
Query: 117 PGSPDSVVLPPRSPDSVVPPARSP 140
P + P +++ P P
Sbjct: 256 PAGMNGSGAPMNLNNNLNPMFLGP 279
Score = 30.8 bits (68), Expect = 0.87
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 74 VPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSV 133
+P PG+P P P++ +P G P + + P + +P G P S + P +
Sbjct: 641 MPVPGNP----AVPGMPNAGLPGVGLPSAGL-----PGAGLPSTGLPGSAITSAGLPGAG 691
Query: 134 VPPARSPDSGG 144
+P A P +GG
Sbjct: 692 MPSAGIPSAGG 702
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,270,439
Number of Sequences: 37866
Number of extensions: 1016659
Number of successful extensions: 20604
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 1467
Number of HSP's that attempted gapping in prelim test: 6544
Number of HSP's gapped (non-prelim): 7530
length of query: 210
length of database: 18,247,518
effective HSP length: 98
effective length of query: 112
effective length of database: 14,536,650
effective search space: 1628104800
effective search space used: 1628104800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.