Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239746462
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
(122 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 259 3e-70
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 259 3e-70
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 259 3e-70
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 209 5e-55
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 207 1e-54
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 204 1e-53
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 200 2e-52
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 198 9e-52
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 178 1e-45
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ... 178 1e-45
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ... 178 1e-45
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 178 1e-45
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 174 1e-44
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 174 1e-44
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 174 1e-44
gi|169184221 PREDICTED: family with sequence similarity 27, memb... 173 3e-44
gi|239752497 PREDICTED: similar to family with sequence similari... 172 7e-44
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 170 2e-43
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 150 2e-37
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ... 45 1e-05
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] 40 6e-04
gi|169210342 PREDICTED: hypothetical protein [Homo sapiens] 33 0.053
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 33 0.053
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 32 0.15
gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens] 32 0.15
gi|11225260 DNA topoisomerase I [Homo sapiens] 31 0.20
gi|7706635 cornulin [Homo sapiens] 30 0.45
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 30 0.58
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 29 0.76
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 29 0.76
>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 122
Score = 259 bits (663), Expect = 3e-70
Identities = 122/122 (100%), Positives = 122/122 (100%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
Query: 121 NP 122
NP
Sbjct: 121 NP 122
>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
sapiens]
Length = 122
Score = 259 bits (663), Expect = 3e-70
Identities = 122/122 (100%), Positives = 122/122 (100%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
Query: 121 NP 122
NP
Sbjct: 121 NP 122
>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
Length = 122
Score = 259 bits (663), Expect = 3e-70
Identities = 122/122 (100%), Positives = 122/122 (100%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
Query: 121 NP 122
NP
Sbjct: 121 NP 122
>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
Length = 124
Score = 209 bits (531), Expect = 5e-55
Identities = 101/124 (81%), Positives = 109/124 (87%), Gaps = 2/124 (1%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQ--TKGHTAEALKHTP 118
TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERRENGRHTHT+ T+ HT EALKHTP
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP 120
Query: 119 PGNP 122
PGNP
Sbjct: 121 PGNP 124
>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
sapiens]
Length = 125
Score = 207 bits (528), Expect = 1e-54
Identities = 101/125 (80%), Positives = 108/125 (86%), Gaps = 3/125 (2%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTH---TQTKGHTAEALKHT 117
TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERRENGRHTH T T+ HT EALKHT
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHTTHTQRHTEEALKHT 120
Query: 118 PPGNP 122
PPGNP
Sbjct: 121 PPGNP 125
>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
Length = 122
Score = 204 bits (520), Expect = 1e-53
Identities = 98/122 (80%), Positives = 105/122 (86%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERREN HT T T+ HT EALKHTPPG
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALKHTPPG 120
Query: 121 NP 122
NP
Sbjct: 121 NP 122
>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 200 bits (509), Expect = 2e-52
Identities = 99/126 (78%), Positives = 105/126 (83%), Gaps = 4/126 (3%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL++RRI SRGPGF A KADP RKRLT GLMTQ ETQKE QRQAAM++TALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGR----HTHTQTKGHTAEALKH 116
TGHI+PKTH HTG HTQTHRE ERNTQRLRDRERRENGR HTHT T+ HTAEALKH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 198 bits (503), Expect = 9e-52
Identities = 98/126 (77%), Positives = 104/126 (82%), Gaps = 4/126 (3%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL++RRI SRGPGF A KADP RKRLT GLMTQ ETQKE QRQAAM++TALW
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTH----TQTKGHTAEALKH 116
TGHI+PKTH HTG HTQTHRE ERNTQRLRDRERRE GRHTH T T+ HTAEALKH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRETGRHTHRHTQTHTQRHTAEALKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 131
Score = 178 bits (451), Expect = 1e-45
Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL+DRRI SRGPG HA KADP RK+LTTGLMTQAETQKE QRQAAM ET LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T HT KHT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118
>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
sapiens]
Length = 131
Score = 178 bits (451), Expect = 1e-45
Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL+DRRI SRGPG HA KADP RK+LTTGLMTQAETQKE QRQAAM ET LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T HT KHT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118
>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
sapiens]
Length = 174
Score = 178 bits (451), Expect = 1e-45
Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL+DRRI SRGPG HA KADP RK+LTTGLMTQAETQKE QRQAAM ET LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T HT KHT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118
>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 174
Score = 178 bits (451), Expect = 1e-45
Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL+DRRI SRGPG HA KADP RK+LTTGLMTQAETQKE QRQAAM ET LW
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T HT KHT
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118
>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 174 bits (442), Expect = 1e-44
Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG QLL+DRR+ SRGPG H K +PR RK LT G TQAETQK QRQAAM+E AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRH----THTQTKGHTAEALKH 116
TGHI+PKTH HTGTHTQT RE ERNTQRLRDRERRENGRH T+T T+ HTA A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 174 bits (442), Expect = 1e-44
Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG QLL+DRR+ SRGPG H K +PR RK LT G TQAETQK QRQAAM+E AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRH----THTQTKGHTAEALKH 116
TGHI+PKTH HTGTHTQT RE ERNTQRLRDRERRENGRH T+T T+ HTA A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 174 bits (442), Expect = 1e-44
Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG QLL+DRR+ SRGPG H K +PR RK LT G TQAETQK QRQAAM+E AL
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRH----THTQTKGHTAEALKH 116
TGHI+PKTH HTGTHTQT RE ERNTQRLRDRERRENGRH T+T T+ HTA A KH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 117 TPPGNP 122
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|169184221 PREDICTED: family with sequence similarity 27, member
E3 [Homo sapiens]
Length = 113
Score = 173 bits (439), Expect = 3e-44
Identities = 84/109 (77%), Positives = 90/109 (82%)
Query: 6 QLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHI 65
QLL+DRRI SRGPG H KA+PR RK LTTGLMTQAE QK+ QRQAAM+ETALW TGHI
Sbjct: 5 QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
Query: 66 QPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEAL 114
+P+TH HTGTHTQT RE ERNTQRLRDRERRENGRHTHT T HT L
Sbjct: 65 RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
>gi|239752497 PREDICTED: similar to family with sequence similarity
27, member D1, partial [Homo sapiens]
Length = 122
Score = 172 bits (435), Expect = 7e-44
Identities = 88/122 (72%), Positives = 95/122 (77%), Gaps = 6/122 (4%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL+++RI SRGPGFH KAD RKRLT GLMTQAE +KE QRQAAM++TALW
Sbjct: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTH------TQTKGHTAEAL 114
TGHI PKTH HTG HTQTHRE ERNTQRLRDRERRE RHTH T T+ HTAEAL
Sbjct: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
Query: 115 KH 116
KH
Sbjct: 121 KH 122
>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 113
Score = 170 bits (431), Expect = 2e-43
Identities = 83/109 (76%), Positives = 89/109 (81%)
Query: 6 QLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHI 65
QLL+DRRI SRGPG H KA+ R RK LTTGLMTQAE QK+ QRQAAM+ETALW TGHI
Sbjct: 5 QLLRDRRISSRGPGLHTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64
Query: 66 QPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEAL 114
+P+TH HTGTHTQT RE ERNTQRLRDRERRENGRHTHT T HT L
Sbjct: 65 RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113
>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 134
Score = 150 bits (379), Expect = 2e-37
Identities = 83/140 (59%), Positives = 91/140 (65%), Gaps = 24/140 (17%)
Query: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
MG R QLL+DR I S GPG H KA PR R+RLTTG TQAETQKE QRQA M+E ALW
Sbjct: 1 MGMRFQLLRDRCISSHGPGLHTPKAGPRRRRRLTTGCTTQAETQKEAHQRQADMREIALW 60
Query: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT---------- 110
TG I+P+ T+ QT RE ERNTQR RD+ER+ENGRHTHT T HT
Sbjct: 61 RTGRIRPE------TYMQTDRERERNTQRPRDKERKENGRHTHTHTLTHTHSHTHTHTHT 114
Query: 111 --------AEALKHTPPGNP 122
AEALKHTPPGNP
Sbjct: 115 QTHTQDHRAEALKHTPPGNP 134
>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
sapiens]
Length = 228
Score = 45.4 bits (106), Expect = 1e-05
Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 35/117 (29%)
Query: 24 KADPRGRKRLTTGLMTQAETQKEVQQRQA-AMQETALWFTGHIQPKTHKHTGTHTQTHRE 82
K +P G KRL TG TQAET+ E Q++ + A G P+ THTQT R+
Sbjct: 12 KPEPPG-KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR-----THTQTDRD 65
Query: 83 WERNTQRLRDRERRENGR---------------------HTHTQTKGHTAEALKHTP 118
+R R ++RE RE R HTHTQT HT HTP
Sbjct: 66 RKRG--RRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHT-----HTP 115
>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 39.7 bits (91), Expect = 6e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 69 THKHTGTHTQTHREWERNTQRLRDRER 95
TH HT THT+ RE ER T+R R+RER
Sbjct: 74 THTHTHTHTENERESERETERERERER 100
>gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 136
Score = 33.1 bits (74), Expect = 0.053
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 69 THKHTGTHTQTHRE-WERNTQRLRDRER 95
TH HT THT+ RE ER +R R+RER
Sbjct: 74 THTHTHTHTENERESGERQRERERERER 101
Score = 29.3 bits (64), Expect = 0.76
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 73 TGTHTQTHREWERNT---QRLRDRERRENGRHTHTQTKGHTAEALKHTPPGNP 122
T THT TH E ER + QR R+RER + + +L+ PG P
Sbjct: 74 THTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 33.1 bits (74), Expect = 0.053
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 40 QAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRER---R 96
+ E Q+E ++ + +ET + +T +HT T + ++ ER +R+RDRER +
Sbjct: 71 EGERQRERERDRDRQRETER--ERDKERETDRHTETDRERQKQKEREMERVRDREREKQK 128
Query: 97 ENGRHTHT 104
E GR T
Sbjct: 129 EMGRERQT 136
Score = 32.0 bits (71), Expect = 0.12
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 40 QAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQT---HREWERNTQRLRDRERR 96
+ E QKE+ + + +ET Q + + TG +T HRE ER +R R+R+R
Sbjct: 123 EREKQKEMGRERQTDRETDR--ERERQAERERETGRERKTEDRHRERERERKRERERKRE 180
Query: 97 ENGRHTHT 104
R HT
Sbjct: 181 TKERERHT 188
Score = 27.3 bits (59), Expect = 2.9
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 71 KHTGTHTQT---HREWERNTQRLRDRERRENGRHTHTQ 105
+HT T T+T RE R T R RDR + H++
Sbjct: 8 RHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSE 45
Score = 26.9 bits (58), Expect = 3.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 71 KHTGTHTQTHREWERNTQRLRDRER 95
K HT RE +R T R RDR+R
Sbjct: 182 KERERHTDMERERQRETDRKRDRQR 206
Score = 25.8 bits (55), Expect = 8.4
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 34 TTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTHREWERNTQRLRDR 93
T G T ET+ +QR+ + +H+ Q R+ ERN +R RDR
Sbjct: 5 TEGRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQ--RDRERNRERDRDR 62
Query: 94 ERRE 97
ER +
Sbjct: 63 EREK 66
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 31.6 bits (70), Expect = 0.15
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 21 HAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTH 80
H+ + R R+R T T+ E +++ + + ++T Q + + + T+
Sbjct: 205 HSERGRERERERETE---TETERKRQTDRERDRQRKTER--EREKQAERERASERETERD 259
Query: 81 REWERNTQRLRDRERRENGRHTHTQTK 107
+E ER R RDR+RR+ R T K
Sbjct: 260 KERERERDRDRDRDRRQKERERQTDRK 286
Score = 30.8 bits (68), Expect = 0.26
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 14/93 (15%)
Query: 28 RGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTHREWERNT 87
RGR R T G + E Q++ ++ + + + + T + Q RE E+N
Sbjct: 137 RGRDRQTDG-QRERERQRDAEKERERQTDR----------ERQRQTERNRQKEREREKNR 185
Query: 88 QRLRDRER---RENGRHTHTQTKGHTAEALKHT 117
Q R+RER +EN +G E + T
Sbjct: 186 QERRERERQREKENKTEDRHSERGRERERERET 218
Score = 27.3 bits (59), Expect = 2.9
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Query: 17 GPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTH 76
G A D R R R Q E ++ ++RQ +ET + H+ H
Sbjct: 43 GQAHKDADGDDRERNR-------QKERERRREKRQTE-RETDRKRERRREKDRHRKRDRH 94
Query: 77 TQTHREWERNTQRLRDRER---RENGRHTHTQTKGHT 110
+ R+ E+ +R DRER RE R+ + + T
Sbjct: 95 RERQRDREKERERQTDRERDRQREKERNRQKERERET 131
Score = 26.9 bits (58), Expect = 3.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 66 QPKTHKHTGTHTQTHREWERNTQRLRDRE-RRENGRHTHTQTKG 108
+ + + T RE ERN Q+ R+RE RE R QT G
Sbjct: 102 EKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDG 145
Score = 26.6 bits (57), Expect = 4.9
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 68 KTHKHTGTHTQTHREWERNTQRLRDRER-RENGRHTHTQ 105
+T + + RE ERN +R R+RER RE R T+
Sbjct: 296 ETERKRERQRERERERERNRKRERERERERERERQRETE 334
Score = 26.6 bits (57), Expect = 4.9
Identities = 16/66 (24%), Positives = 28/66 (42%)
Query: 40 QAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENG 99
+ E +E ++ + ++T + + Q + RE ER+ Q R+RE RE
Sbjct: 332 ETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERD 391
Query: 100 RHTHTQ 105
R Q
Sbjct: 392 RDRDRQ 397
>gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 0.15
Identities = 30/120 (25%), Positives = 37/120 (30%), Gaps = 16/120 (13%)
Query: 19 GFHAAKADPRGRKRLTTGL-----MTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHT 73
GF P G LT G+ T E ++ + +E L GH P
Sbjct: 130 GFPFGSGPPEGWTELTMGVGPWREETWGELIEKCLESMCQGEEAELQLPGHSGPPVRLTL 189
Query: 74 GTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEA-----------LKHTPPGNP 122
+ TQ WE T R E R T G+ A L PPG P
Sbjct: 190 ASFTQGRDSWELETSEKEALAREERARGTELFRAGNPEGAARCYGRALRLLLTLPPPGPP 249
>gi|11225260 DNA topoisomerase I [Homo sapiens]
Length = 765
Score = 31.2 bits (69), Expect = 0.20
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 69 THKHTGTHT-QTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKH 116
+HKH H + HR E ++ R++ + N H ++ K E KH
Sbjct: 21 SHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKH 69
>gi|7706635 cornulin [Homo sapiens]
Length = 495
Score = 30.0 bits (66), Expect = 0.45
Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 29 GRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQT------HRE 82
GR T T + + Q Q + GH Q + HT T TQT H+
Sbjct: 251 GRTSKQTQEATNDQNRGTETHGQGRSQTSQAVTGGHAQIQAGTHTQTPTQTVEQDSSHQT 310
Query: 83 WERNTQRLRDRERRENGRHTHTQTKGHTAEAL 114
+TQ + G H Q + T++A+
Sbjct: 311 GSTSTQTQESTNGQNRGTEIHGQGRSQTSQAV 342
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 29.6 bits (65), Expect = 0.58
Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 22 AAKADPRGRKRLTTGLMTQAETQKEVQQ---RQAAMQETALWFTGHIQPKTHKHTGTHTQ 78
A +A R ++R Q E +KE ++ RQ ++ + + +
Sbjct: 1242 AERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGD 1301
Query: 79 THREWERNTQRLRDRERRENGRHTHTQTK 107
R+ ER+ +R R+R+RR+ RH+ ++++
Sbjct: 1302 RDRDRERDRERGRERDRRDTKRHSRSRSR 1330
Score = 25.8 bits (55), Expect = 8.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 10/51 (19%)
Query: 77 TQTHREWERNT--------QRLRDRERRENGRHTHTQTKGHTAEALKHTPP 119
T++ REW+R+ R RDR R+E R + K E + PP
Sbjct: 1159 TRSEREWDRDKVREGPRSRSRSRDRRRKE--RAKSKEKKSEKKEKAQEEPP 1207
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 29.3 bits (64), Expect = 0.76
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 4 RQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTG 63
R + ++RR +R P ++ R R R T +A + +R+ Q G
Sbjct: 599 RNSIERERRR-NRSPSRERRRSRSRSRDRRTN----RASRSRSRDRRKIDDQR------G 647
Query: 64 HIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGR 100
++ +HKH G + R+ ER+ +DR++++ R
Sbjct: 648 NLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKER 684
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 29.3 bits (64), Expect = 0.76
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 4 RQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTG 63
R + ++RR +R P ++ R R R T +A + +R+ Q G
Sbjct: 599 RNSIERERRR-NRSPSRERRRSRSRSRDRRTN----RASRSRSRDRRKIDDQR------G 647
Query: 64 HIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGR 100
++ +HKH G + R+ ER+ +DR++++ R
Sbjct: 648 NLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKER 684
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.127 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,470,760
Number of Sequences: 37866
Number of extensions: 214896
Number of successful extensions: 1211
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 904
Number of HSP's gapped (non-prelim): 184
length of query: 122
length of database: 18,247,518
effective HSP length: 89
effective length of query: 33
effective length of database: 14,877,444
effective search space: 490955652
effective search space used: 490955652
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.