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Search of human proteins with 239746181
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746181 PREDICTED: hypothetical protein XP_002343670 [Homo
sapiens]
(191 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757167 PREDICTED: hypothetical protein XP_002345192 [Homo ... 401 e-112
gi|239751677 PREDICTED: hypothetical protein [Homo sapiens] 401 e-112
gi|239746181 PREDICTED: hypothetical protein XP_002343670 [Homo ... 401 e-112
gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] 40 0.002
gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] 40 0.002
gi|13994190 frizzled 8 [Homo sapiens] 39 0.004
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 34 0.088
gi|153792042 G protein-coupled receptor 178 [Homo sapiens] 34 0.088
gi|239755571 PREDICTED: hypothetical protein [Homo sapiens] 33 0.11
gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens] 33 0.11
gi|195947369 junction-mediating and regulatory protein [Homo sap... 33 0.11
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 33 0.15
gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo ... 33 0.15
gi|24432056 hypothetical protein LOC144717 [Homo sapiens] 33 0.15
gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 33 0.20
gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 33 0.20
gi|25777643 potassium intermediate/small conductance calcium-act... 32 0.25
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 32 0.33
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 32 0.33
gi|23397566 transmembrane protein 151A [Homo sapiens] 32 0.33
gi|89886480 zinedin isoform 2 [Homo sapiens] 32 0.43
gi|89886477 zinedin isoform 1 [Homo sapiens] 32 0.43
gi|13376611 zinc finger protein 703 [Homo sapiens] 31 0.57
gi|239753310 PREDICTED: hypothetical protein XP_002345618 [Homo ... 31 0.57
gi|239741764 PREDICTED: hypothetical protein XP_002342289 [Homo ... 31 0.57
gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapi... 31 0.57
gi|148612816 RecQ protein-like 5 isoform 1 [Homo sapiens] 31 0.57
gi|134142824 forkhead box D2 [Homo sapiens] 31 0.57
gi|169216092 PREDICTED: similar to hCG2038853 [Homo sapiens] 31 0.74
gi|169215887 PREDICTED: similar to hCG2038853 [Homo sapiens] 31 0.74
>gi|239757167 PREDICTED: hypothetical protein XP_002345192 [Homo
sapiens]
Length = 191
Score = 401 bits (1030), Expect = e-112
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MPWREPGGPEVQSGVRSPEAGPEKVLHLPSGIWGTQRPSPSSAQNAWGWCREGWEAAGLG 60
MPWREPGGPEVQSGVRSPEAGPEKVLHLPSGIWGTQRPSPSSAQNAWGWCREGWEAAGLG
Sbjct: 1 MPWREPGGPEVQSGVRSPEAGPEKVLHLPSGIWGTQRPSPSSAQNAWGWCREGWEAAGLG 60
Query: 61 TCCLIFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVAR 120
TCCLIFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVAR
Sbjct: 61 TCCLIFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVAR 120
Query: 121 GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAG 180
GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAG
Sbjct: 121 GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAG 180
Query: 181 ALRADRPDQGA 191
ALRADRPDQGA
Sbjct: 181 ALRADRPDQGA 191
>gi|239751677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 191
Score = 401 bits (1030), Expect = e-112
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MPWREPGGPEVQSGVRSPEAGPEKVLHLPSGIWGTQRPSPSSAQNAWGWCREGWEAAGLG 60
MPWREPGGPEVQSGVRSPEAGPEKVLHLPSGIWGTQRPSPSSAQNAWGWCREGWEAAGLG
Sbjct: 1 MPWREPGGPEVQSGVRSPEAGPEKVLHLPSGIWGTQRPSPSSAQNAWGWCREGWEAAGLG 60
Query: 61 TCCLIFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVAR 120
TCCLIFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVAR
Sbjct: 61 TCCLIFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVAR 120
Query: 121 GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAG 180
GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAG
Sbjct: 121 GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAG 180
Query: 181 ALRADRPDQGA 191
ALRADRPDQGA
Sbjct: 181 ALRADRPDQGA 191
>gi|239746181 PREDICTED: hypothetical protein XP_002343670 [Homo
sapiens]
Length = 191
Score = 401 bits (1030), Expect = e-112
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MPWREPGGPEVQSGVRSPEAGPEKVLHLPSGIWGTQRPSPSSAQNAWGWCREGWEAAGLG 60
MPWREPGGPEVQSGVRSPEAGPEKVLHLPSGIWGTQRPSPSSAQNAWGWCREGWEAAGLG
Sbjct: 1 MPWREPGGPEVQSGVRSPEAGPEKVLHLPSGIWGTQRPSPSSAQNAWGWCREGWEAAGLG 60
Query: 61 TCCLIFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVAR 120
TCCLIFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVAR
Sbjct: 61 TCCLIFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVAR 120
Query: 121 GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAG 180
GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAG
Sbjct: 121 GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAG 180
Query: 181 ALRADRPDQGA 191
ALRADRPDQGA
Sbjct: 181 ALRADRPDQGA 191
>gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]
Length = 1184
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 101 VSTVEARGLGPGPEQAAVARGGGGQPPPRPRGGSLPL--------PDVLIWATGSALSGE 152
V+ VEA G QA + G G PP GGS PL P VL T +A G
Sbjct: 203 VAEVEAATALGGEVQAGAVQAGAGGPPAALGGGSQPLSTIQAPPWPAVLPRPTAAAALGP 262
Query: 153 PRGRAPARLRKVQQEQESEAEE 174
P A+ R+V ++ E E EE
Sbjct: 263 P-APVQAKARRVTEDSEEEEEE 283
>gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]
Length = 1231
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 101 VSTVEARGLGPGPEQAAVARGGGGQPPPRPRGGSLPL--------PDVLIWATGSALSGE 152
V+ VEA G QA + G G PP GGS PL P VL T +A G
Sbjct: 203 VAEVEAATALGGEVQAGAVQAGAGGPPAALGGGSQPLSTIQAPPWPAVLPRPTAAAALGP 262
Query: 153 PRGRAPARLRKVQQEQESEAEE 174
P A+ R+V ++ E E EE
Sbjct: 263 P-APVQAKARRVTEDSEEEEEE 283
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 38.5 bits (88), Expect = 0.004
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 65 IFLFQEETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVARGGGG 124
++++ +T SW RS C R W+ G + G +T G GPG GGGG
Sbjct: 602 VWVWSGKTLESW----RSLCTRCCWASKGAAVGGGAGATAAGGGGGPGGGGGGGPGGGGG 657
Query: 125 QPPPRPRGGSL--PLPDVLIWATGSALS 150
P GGSL + L W +G+A S
Sbjct: 658 ---PGGGGGSLYSDVSTGLTWRSGTASS 682
Score = 29.3 bits (64), Expect = 2.2
Identities = 15/27 (55%), Positives = 15/27 (55%)
Query: 107 RGLGPGPEQAAVARGGGGQPPPRPRGG 133
RG G G A ARGGGG RP GG
Sbjct: 197 RGGGGGDAAAPPARGGGGGGKARPPGG 223
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 33.9 bits (76), Expect = 0.088
Identities = 27/83 (32%), Positives = 32/83 (38%), Gaps = 14/83 (16%)
Query: 107 RGLGPGPEQAAVAR---------GGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRA 157
RGLG P Q A GGG PP P P A GS+ +G P G A
Sbjct: 25 RGLGGAPRQRVPALLLPPGPPVGGGGPGAPPSP-----PAVAAAAAAAGSSGAGVPGGAA 79
Query: 158 PARLRKVQQEQESEAEEASASAG 180
A S + +SAS+G
Sbjct: 80 AASAASSSSASSSSSSSSSASSG 102
>gi|153792042 G protein-coupled receptor 178 [Homo sapiens]
Length = 612
Score = 33.9 bits (76), Expect = 0.088
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
Query: 108 GLGPGPEQAAVARGGGGQPPP--------RPRGGSLPLPDVLIWATGSALSGEPRGRAPA 159
G P P QA+ GG G P P R RGG+L L + L+ P P
Sbjct: 2 GAAPSPTQASSRGGGPGPPAPTRAVSSSSRARGGAL---SALGPSPARPLTTSPAPAPPP 58
Query: 160 RLRKVQQEQESEAEEASASAG 180
R R +Q+ + + E AG
Sbjct: 59 RSRPARQQPDPQCWEKRGGAG 79
>gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 33.5 bits (75), Expect = 0.11
Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 79 GARSACQ---RAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVARGGGGQPPP---RPRG 132
GA C+ AW G+ CLG + R PGP +AV G + P RP
Sbjct: 24 GAGRRCRAWPERAWPQAGDSDCLGQGRRAQRR---PGPGVSAVGASGQQRAPESNERPAE 80
Query: 133 GSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAGALRA 184
P P S PRG LR+ A S+S GA RA
Sbjct: 81 EPTPAP---------MPSSAPRGPTEPALRRPSSADRPLAPGPSSSPGAGRA 123
>gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 364
Score = 33.5 bits (75), Expect = 0.11
Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 79 GARSACQ---RAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVARGGGGQPPP---RPRG 132
GA C+ AW G+ CLG + R PGP +AV G + P RP
Sbjct: 127 GAGRRCRAWPERAWPQAGDSDCLGQGRRAQRR---PGPGVSAVGASGQQRAPESNERPAE 183
Query: 133 GSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAGALRA 184
P P S PRG LR+ A S+S GA RA
Sbjct: 184 EPTPAP---------MPSSAPRGPTEPALRRPSSADRPLAPGPSSSPGAGRA 226
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 33.5 bits (75), Expect = 0.11
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 111 PGPEQAAVARGGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQES 170
PGP +++ GG PR L D + + GS E R R+P R + + ++ S
Sbjct: 102 PGPRRSSAWAEGGS-----PRSTRSLLGDPRLRSPGSK-GAESRLRSPVRAKPIPGQKTS 155
Query: 171 EAEEASASAGALRADRP 187
EA++A+ +A A P
Sbjct: 156 EADDAAGAAAAAARPAP 172
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 33.1 bits (74), Expect = 0.15
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 108 GLGPGPEQAAVARGGGGQPPPRPRGGSLPLPDVL-IWATGSALSGEPRGRAPARLRKVQQ 166
GL P AA A G GG PPP P PLP G+ G A A+LRKV +
Sbjct: 187 GLPPSGVPAA-AHGAGGGPPPAP-----PLPAAQGPGGGGAGAPGLAAAIAGAKLRKVSK 240
Query: 167 EQES-------EAEEASASAGAL 182
++E+ +AE + G L
Sbjct: 241 QEEASGGPTAPKAESGRSGGGGL 263
Score = 27.7 bits (60), Expect = 6.3
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 16/85 (18%)
Query: 89 WSHLGEVLCLGLVSTVEARGLGPGPEQAAVARGGGGQPPPRPRGGSLPLPDVLIWATGSA 148
W +V L S +A G A A GGG PPP P + W+
Sbjct: 82 WRDARQVWGLNFGSKEDAAQFAAGMASALEALEGGGPPPP---------PALPTWSV--- 129
Query: 149 LSGEPRGRAPARLRKVQQEQESEAE 173
P G +P + + +++Q +E
Sbjct: 130 ----PNGPSPEEVEQQKRQQPGPSE 150
>gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo
sapiens]
Length = 252
Score = 33.1 bits (74), Expect = 0.15
Identities = 17/45 (37%), Positives = 20/45 (44%)
Query: 115 QAAVARGGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPA 159
+A AR PP P G D L+ A S L+G PR PA
Sbjct: 130 EAGAARAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPA 174
>gi|24432056 hypothetical protein LOC144717 [Homo sapiens]
Length = 249
Score = 33.1 bits (74), Expect = 0.15
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 114 EQAAVARGGGGQPPPRPRGGSLPLPDVL 141
+Q A RGGGG P+P+ SLPLP L
Sbjct: 125 QQLAAVRGGGGMALPQPQPQSLPLPPSL 152
>gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 32.7 bits (73), Expect = 0.20
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 111 PGPEQAAVARGGGGQPPPRPRGGSLPLPDV-LIWATGSALSGEPRGRAPARLRKVQQEQE 169
P PE+ + A G G P G + LP+ G E RG APA K Q+E
Sbjct: 99 PQPEEGSPAGGQKGGAPAEGEGAAETLPEASRAVENGCCTPKEGRG-APAEAGKEQKETN 157
Query: 170 SEAEEASASAGALR 183
E+ + S G LR
Sbjct: 158 IESMKMEGSRGRLR 171
>gi|28559069 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 32.7 bits (73), Expect = 0.20
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 111 PGPEQAAVARGGGGQPPPRPRGGSLPLPDV-LIWATGSALSGEPRGRAPARLRKVQQEQE 169
P PE+ + A G G P G + LP+ G E RG APA K Q+E
Sbjct: 99 PQPEEGSPAGGQKGGAPAEGEGAAETLPEASRAVENGCCTPKEGRG-APAEAGKEQKETN 157
Query: 170 SEAEEASASAGALR 183
E+ + S G LR
Sbjct: 158 IESMKMEGSRGRLR 171
>gi|25777643 potassium intermediate/small conductance
calcium-activated channel, subfamily N, member 1 [Homo
sapiens]
Length = 543
Score = 32.3 bits (72), Expect = 0.25
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 107 RGLGPGPEQAAVARGGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQ 166
R LG GP G G+ PP P G P P EP +P R Q
Sbjct: 12 RPLGSGP-------GALGRDPPDPEAGHPPQPPHSPGLQVVVAKSEPARPSPGSPRGQPQ 64
Query: 167 EQESEAEEASASAGALRA 184
+Q+ + ++ AG RA
Sbjct: 65 DQDDDEDDEEDEAGRQRA 82
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 32.0 bits (71), Expect = 0.33
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
Query: 123 GGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAGAL 182
G +P P P P W L PRG+ PAR +K Q + ++A A A
Sbjct: 195 GARPRPGPTSSRRP------WGRAGGL--RPRGKRPARGKKRPSSQRRCSSPSAARASAT 246
Query: 183 RADRP 187
A RP
Sbjct: 247 SAPRP 251
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 32.0 bits (71), Expect = 0.33
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
Query: 123 GGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAGAL 182
G +P P P P W L PRG+ PAR +K Q + ++A A A
Sbjct: 195 GARPRPGPTSSRRP------WGRAGGL--RPRGKRPARGKKRPSSQRRCSSPSAARASAT 246
Query: 183 RADRP 187
A RP
Sbjct: 247 SAPRP 251
>gi|23397566 transmembrane protein 151A [Homo sapiens]
Length = 468
Score = 32.0 bits (71), Expect = 0.33
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 67 LFQEETSLSWKEGARSACQRAAWSHL---------GEVLCLGLVSTVEARGLGPGPEQAA 117
L +E+ L G+ S C+ + W L G V+ ++TV LGP +AA
Sbjct: 22 LREEQRPLKQSLGS-SLCRESHWKCLLLTLLIHACGAVVAWCRLATVPRLVLGP---EAA 77
Query: 118 VARGGGGQPPPRP 130
+ARG GG PP P
Sbjct: 78 LARGAGGPPPTYP 90
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 31.6 bits (70), Expect = 0.43
Identities = 31/120 (25%), Positives = 41/120 (34%), Gaps = 15/120 (12%)
Query: 70 EETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVARGGGGQPPPR 129
EE + + A S+C+ LG G PGP A GGGG P P
Sbjct: 3 EERAAAAVAAAASSCRP-----LGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPT 57
Query: 130 PRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAGALRADRPDQ 189
L LP +L + AR + E+E E A L+ +R Q
Sbjct: 58 AGPEPLSLPGILHFIQ----------HEWARFEAEKARWEAERAELQAQVAFLQGERKGQ 107
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 31.6 bits (70), Expect = 0.43
Identities = 31/120 (25%), Positives = 41/120 (34%), Gaps = 15/120 (12%)
Query: 70 EETSLSWKEGARSACQRAAWSHLGEVLCLGLVSTVEARGLGPGPEQAAVARGGGGQPPPR 129
EE + + A S+C+ LG G PGP A GGGG P P
Sbjct: 3 EERAAAAVAAAASSCRP-----LGSGAGPGPTGAAPVSAPAPGPGPAGKGGGGGGSPGPT 57
Query: 130 PRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQQEQESEAEEASASAGALRADRPDQ 189
L LP +L + AR + E+E E A L+ +R Q
Sbjct: 58 AGPEPLSLPGILHFIQ----------HEWARFEAEKARWEAERAELQAQVAFLQGERKGQ 107
>gi|13376611 zinc finger protein 703 [Homo sapiens]
Length = 590
Score = 31.2 bits (69), Expect = 0.57
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 111 PGPEQAAVARGGGGQP 126
P PE AAV+RGGGG+P
Sbjct: 251 PSPEPAAVSRGGGGEP 266
>gi|239753310 PREDICTED: hypothetical protein XP_002345618 [Homo
sapiens]
Length = 415
Score = 31.2 bits (69), Expect = 0.57
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 17/86 (19%)
Query: 106 ARGLGPGPEQAAVARGGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQ 165
A G PG E A G QP RPR G + P + T LS + GR PA
Sbjct: 65 ASGGSPGLEAAGSPLPAGAQPCGRPRSGGIGDP---VLRTPGPLSAQ--GRTPA------ 113
Query: 166 QEQESEAEEASASAGALRADRPDQGA 191
++A GA R++ P + A
Sbjct: 114 ------VQDAPRCLGAPRSEHPGRSA 133
>gi|239741764 PREDICTED: hypothetical protein XP_002342289 [Homo
sapiens]
Length = 433
Score = 31.2 bits (69), Expect = 0.57
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 17/86 (19%)
Query: 106 ARGLGPGPEQAAVARGGGGQPPPRPRGGSLPLPDVLIWATGSALSGEPRGRAPARLRKVQ 165
A G PG E A G QP RPR G + P + T LS + GR PA
Sbjct: 65 ASGGSPGLEAAGSPLPAGAQPCGRPRSGGIGDP---VLRTPGPLSAQ--GRTPA------ 113
Query: 166 QEQESEAEEASASAGALRADRPDQGA 191
++A GA R++ P + A
Sbjct: 114 ------VQDAPRCLGAPRSEHPGRSA 133
>gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapiens]
Length = 1343
Score = 31.2 bits (69), Expect = 0.57
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 121 GGGGQPPPRPRGGSLPLPDVLIW----ATGSALSGEPRGRAPARLRKVQQEQESEAEEAS 176
GGGGQPPP RG S L ++G+ L PAR R+ +E +
Sbjct: 1060 GGGGQPPPLQRGKSQQLTVSAAQKPRPSSGNLLQSPEPSYGPARPRQQSLSKEGSIGGSG 1119
Query: 177 ASAG 180
S G
Sbjct: 1120 GSGG 1123
>gi|148612816 RecQ protein-like 5 isoform 1 [Homo sapiens]
Length = 991
Score = 31.2 bits (69), Expect = 0.57
Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 26/98 (26%)
Query: 100 LVSTVEARGLGPGPEQAAVARGGGGQPPPRPRG-----GSLPLPDVLIWATGSALSGEPR 154
L+ T R P PE RGG +PP RP G GS PLP PR
Sbjct: 672 LMETTRIREQAPQPE-----RGGEHEPPSRPCGLLDEDGSEPLPG-------------PR 713
Query: 155 GRAP---ARLRKVQQEQESEAEEASASAGALRADRPDQ 189
G P A E+++++ +S RA + Q
Sbjct: 714 GEVPGGSAHYGGPSPEKKAKSSSGGSSLAKGRASKKQQ 751
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 31.2 bits (69), Expect = 0.57
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 111 PGPEQAAVARGGGGQPPPRPRGGSLPLP 138
PGP A+V G G P P P GS P P
Sbjct: 320 PGPPTASVFAGAGSAPAPAPASGSGPGP 347
>gi|169216092 PREDICTED: similar to hCG2038853 [Homo sapiens]
Length = 191
Score = 30.8 bits (68), Expect = 0.74
Identities = 40/138 (28%), Positives = 48/138 (34%), Gaps = 33/138 (23%)
Query: 29 PSGIWGTQRPSPS------SAQNAWGWCREGWEAAGLGTCCLIFLFQEETSLSWKEGAR- 81
PS +WG + P A+ WG EG E G G E L+ ++GA
Sbjct: 42 PSNLWGKEGGHPVVPKAQVKARGGWG---EGLELGGSGPTGKARPASESGPLTPRKGASH 98
Query: 82 ---------------SACQRAAWSHLGEVL--CLGLVSTVEARGL----GPGPEQAA--V 118
+ACQR G CLG + EAR G P AA V
Sbjct: 99 TPEAPGVGRAFRVQGTACQRPRAGTEGSRCGWCLGARGSGEAREAKGERGADPRGAAGDV 158
Query: 119 ARGGGGQPPPRPRGGSLP 136
GG G P P G P
Sbjct: 159 GFGGAGTGPETPLGRHTP 176
>gi|169215887 PREDICTED: similar to hCG2038853 [Homo sapiens]
Length = 191
Score = 30.8 bits (68), Expect = 0.74
Identities = 40/138 (28%), Positives = 48/138 (34%), Gaps = 33/138 (23%)
Query: 29 PSGIWGTQRPSPS------SAQNAWGWCREGWEAAGLGTCCLIFLFQEETSLSWKEGAR- 81
PS +WG + P A+ WG EG E G G E L+ ++GA
Sbjct: 42 PSNLWGKEGGHPVVPKAQVKARGGWG---EGLELGGSGPTGKARPASESGPLTPRKGASH 98
Query: 82 ---------------SACQRAAWSHLGEVL--CLGLVSTVEARGL----GPGPEQAA--V 118
+ACQR G CLG + EAR G P AA V
Sbjct: 99 TPEAPGVGRAFRVQGTACQRPRAGTEGSRCGWCLGARGSGEAREAKGERGADPRGAAGDV 158
Query: 119 ARGGGGQPPPRPRGGSLP 136
GG G P P G P
Sbjct: 159 GFGGAGTGPETPLGRHTP 176
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,316,604
Number of Sequences: 37866
Number of extensions: 637509
Number of successful extensions: 3081
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 2914
Number of HSP's gapped (non-prelim): 299
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.