Search of human proteins with 239745880

Search of human proteins with 239745880

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo
sapiens]
         (140 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]           294   1e-80
gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo ...   294   1e-80
gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo ...   294   1e-80
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        51   3e-07
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         44   6e-05
gi|222352122 hypothetical protein LOC284297 [Homo sapiens]             41   4e-04
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]       39   0.001
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]            38   0.002
gi|153251865 hypothetical protein LOC84226 [Homo sapiens]              38   0.002
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]           37   0.004
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]           37   0.004
gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo ...    37   0.007
gi|239743289 PREDICTED: hypothetical protein XP_002342818 [Homo ...    37   0.007
gi|119226260 calcium homeostasis endoplasmic reticulum protein [...    36   0.009
gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]     36   0.012
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            35   0.015
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         35   0.015
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]             35   0.015
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]            35   0.020
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]            35   0.020
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]            35   0.020
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]                35   0.026
gi|153252068 testes-specific heterogenous nuclear ribonucleoprot...    35   0.026
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    35   0.026
gi|169183867 PREDICTED: hypothetical protein [Homo sapiens]            34   0.034
gi|239753821 PREDICTED: hypothetical protein [Homo sapiens]            34   0.034
gi|16905517 FUS interacting protein (serine-arginine rich) 1 iso...    34   0.045
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]    34   0.045
gi|146134388 YLP motif containing 1 [Homo sapiens]                     34   0.045
gi|224465238 hypothetical protein LOC283999 [Homo sapiens]             33   0.058

>gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score =  294 bits (753), Expect = 1e-80
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 1   MWVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT 60
           MWVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT
Sbjct: 1   MWVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT 60

Query: 61  APTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART 120
           APTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART
Sbjct: 61  APTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART 120

Query: 121 LTSSFSLLIGSHPLPRDPDP 140
           LTSSFSLLIGSHPLPRDPDP
Sbjct: 121 LTSSFSLLIGSHPLPRDPDP 140


>gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo
           sapiens]
          Length = 140

 Score =  294 bits (753), Expect = 1e-80
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 1   MWVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT 60
           MWVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT
Sbjct: 1   MWVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT 60

Query: 61  APTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART 120
           APTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART
Sbjct: 61  APTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART 120

Query: 121 LTSSFSLLIGSHPLPRDPDP 140
           LTSSFSLLIGSHPLPRDPDP
Sbjct: 121 LTSSFSLLIGSHPLPRDPDP 140


>gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo
           sapiens]
          Length = 140

 Score =  294 bits (753), Expect = 1e-80
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 1   MWVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT 60
           MWVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT
Sbjct: 1   MWVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT 60

Query: 61  APTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART 120
           APTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART
Sbjct: 61  APTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART 120

Query: 121 LTSSFSLLIGSHPLPRDPDP 140
           LTSSFSLLIGSHPLPRDPDP
Sbjct: 121 LTSSFSLLIGSHPLPRDPDP 140


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 51.2 bits (121), Expect = 3e-07
 Identities = 35/92 (38%), Positives = 42/92 (45%)

Query: 7   SQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSG 66
           S+  +RRGR    RR       P TRG  RS   +  G SR R+  RRR   RT      
Sbjct: 545 SRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRS 604

Query: 67  APRTRCTACTARSRSPRRRTSRLSAADTRFSR 98
             RT      +RSR+P RR SR  +   R SR
Sbjct: 605 RSRTPARRGRSRSRTPARRRSRTRSPVRRRSR 636



 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 33/72 (45%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 20  RRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRR-RRPPRTAPTCSGAPRTRCTACTAR 78
           RRR+R  SP R  G  RS   +  G SR R+  RR R   RT    SG  R+R  A   R
Sbjct: 632 RRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGR 691

Query: 79  SRS--PRRRTSR 88
           SRS  PRR  SR
Sbjct: 692 SRSRTPRRGRSR 703



 Score = 44.7 bits (104), Expect = 3e-05
 Identities = 48/141 (34%), Positives = 59/141 (41%), Gaps = 21/141 (14%)

Query: 19   TRRRTRGPSPP--------RTRGTPRSAQSSHPGSSRRRSG------TRRRRPPRTAPTC 64
            +RRR+R  +PP        RT  T R ++S  P  +RRRS       TRRR   RT+P  
Sbjct: 1919 SRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPIT 1978

Query: 65   SGAPRTRCTACT-ARSRS------PRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLP 117
                R+R +  T  RSRS       RR  SR S    R SR        +   S  PLLP
Sbjct: 1979 RRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLP 2038

Query: 118  ARTLTSSFSLLIGSHPLPRDP 138
             +   S   L I      R P
Sbjct: 2039 RKRSRSRSPLAIRRRSRSRTP 2059



 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 10/84 (11%)

Query: 12   RRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTR 71
            RR R   +   TR  +PPR R +P S  S  P    R S  RRRR        + +PRT+
Sbjct: 1705 RRSRSASSSPETRSRTPPRHRRSP-SVSSPEPAEKSRSS--RRRR-------SASSPRTK 1754

Query: 72   CTACTARSRSPRRRTSRLSAADTR 95
             T+   RS SP+ R  + S + +R
Sbjct: 1755 TTSRRGRSPSPKPRGLQRSRSRSR 1778



 Score = 40.0 bits (92), Expect = 6e-04
 Identities = 37/90 (41%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 11  KRRGRDIC-TRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPR 69
           +RR R    TRRR+R  +P R RG  RS   +    SR RS  RRR   R+    SG  R
Sbjct: 591 RRRSRSRTPTRRRSRSRTPAR-RGRSRSRTPARR-RSRTRSPVRRRSRSRSPARRSGRSR 648

Query: 70  TRCTACTARSRS--PRRRTSRLSAADTRFS 97
           +R  A   RSRS  P RR    S    R S
Sbjct: 649 SRTPARRGRSRSRTPARRGRSRSRTPARRS 678



 Score = 39.7 bits (91), Expect = 8e-04
 Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 15/100 (15%)

Query: 11   KRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSG-----TRRRRPPRTAPTCS 65
            + R R   TRRR+R  + P +R   R ++S  P  +RRRS      TRRR   RT P   
Sbjct: 1899 RSRSRTSVTRRRSRSRASPVSR---RRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTR 1955

Query: 66   GAPRTRCTACT-ARSRS------PRRRTSRLSAADTRFSR 98
               R+R    T  RSRS       RR  SR S    R SR
Sbjct: 1956 RRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSR 1995



 Score = 39.3 bits (90), Expect = 0.001
 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 8/92 (8%)

Query: 5   QHSQCDKRRGRDICTRRRTRGPSPPR-----TRGTPR--SAQSSHPGSSRRRSGTRRRRP 57
           + S+  +R GR    +RR R  SP R     +R T R   ++S+  G S  RS   R R 
Sbjct: 514 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 573

Query: 58  PRTAPTCSGAPRTRCTA-CTARSRSPRRRTSR 88
               P   G  R+R  A   +RSR+P RR SR
Sbjct: 574 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSR 605



 Score = 37.7 bits (86), Expect = 0.003
 Identities = 37/94 (39%), Positives = 45/94 (47%), Gaps = 11/94 (11%)

Query: 6   HSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCS 65
           HS+    RGR   +R RT     P  RG  RS   +    SR R+ TRRR   RT P   
Sbjct: 563 HSRSPATRGR---SRSRT-----PARRGRSRSRTPAR-RRSRSRTPTRRRSRSRT-PARR 612

Query: 66  GAPRTRCTA-CTARSRSPRRRTSRLSAADTRFSR 98
           G  R+R  A   +R+RSP RR SR  +   R  R
Sbjct: 613 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR 646



 Score = 37.4 bits (85), Expect = 0.004
 Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 11  KRRGRDICTRRRTRGPSPPRTRGTPRSA--QSSHPGSSRRRSGTRRRRPPRTAPTCSGAP 68
           + R R    R R+R  +P R R   RS   + S   S  RRSG  R R P       G  
Sbjct: 603 RSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR----GRS 658

Query: 69  RTRCTACTARSRS--PRRRTSR 88
           R+R  A   RSRS  P RR+ R
Sbjct: 659 RSRTPARRGRSRSRTPARRSGR 680



 Score = 37.4 bits (85), Expect = 0.004
 Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 6/85 (7%)

Query: 20   RRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACT--- 76
            R R+R P   R R   R++  S   S  R S TRRR   R +P      R+R    T   
Sbjct: 1875 RSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRR 1934

Query: 77   ARSRSP---RRRTSRLSAADTRFSR 98
            +RSR+P   RR  SR      R SR
Sbjct: 1935 SRSRTPTTRRRSRSRTPPVTRRRSR 1959



 Score = 37.0 bits (84), Expect = 0.005
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 3/92 (3%)

Query: 7   SQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSG 66
           S   K R      R ++   +P R  G  RS  ++  G SR R+ T+R      +P    
Sbjct: 456 SPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWR- 514

Query: 67  APRTRCTACTARSRSPRRRTSRLSAADTRFSR 98
             R+R      RSRSP+RR    S     +SR
Sbjct: 515 --RSRSAQRWGRSRSPQRRGRSRSPQRPGWSR 544



 Score = 36.2 bits (82), Expect = 0.009
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 5/131 (3%)

Query: 11  KRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSR----RRSGTRRRRPPRTAPTCSG 66
           + R R    R R+R  +P R  G  RS   +  G SR    RR  +R R   R   + S 
Sbjct: 657 RSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSR 716

Query: 67  APRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESL-PPLLPARTLTSSF 125
            P+ R  + ++  R  + RTS+  +       +      ++   SL  P   A++  S  
Sbjct: 717 TPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLR 776

Query: 126 SLLIGSHPLPR 136
             L GS P P+
Sbjct: 777 RSLSGSSPCPK 787



 Score = 36.2 bits (82), Expect = 0.009
 Identities = 35/103 (33%), Positives = 43/103 (41%), Gaps = 11/103 (10%)

Query: 7    SQCDKRRGRD---ICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSG--TRRRRPPRTA 61
            S    RR R    + +RRR+R  + P +R   RS  S     SR R+   +RRR   RT 
Sbjct: 1869 SPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTP 1928

Query: 62   PTCSGAPRTRCTACTARSRS------PRRRTSRLSAADTRFSR 98
            P      R+R      RSRS       RR  SR      R SR
Sbjct: 1929 PVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSR 1971



 Score = 35.8 bits (81), Expect = 0.012
 Identities = 40/116 (34%), Positives = 50/116 (43%), Gaps = 23/116 (19%)

Query: 6    HSQCDKRR--GRDICTRRRTRGPSPP------RTRGTP----RSAQSSHPGSSRR-RSGT 52
            HS+   R+   R    RRR R  +PP      R+R +P    RS   + P + RR RS T
Sbjct: 1821 HSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRT 1880

Query: 53   ----RRRRPPRTAPTCSGAPRTRCTACTARSR------SPRRRTSRLSAADTRFSR 98
                RRR   RT+P      R+R +    RSR      S RR  SR      R SR
Sbjct: 1881 PLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSR 1936



 Score = 35.4 bits (80), Expect = 0.015
 Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 5/100 (5%)

Query: 4    PQHSQCDK--RRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRP---P 58
            P+H    +  RRG       +T+  +PPR R +  S + +      RRS +    P    
Sbjct: 1659 PEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRS 1718

Query: 59   RTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSR 98
            RT P    +P         +SRS RRR S  S      SR
Sbjct: 1719 RTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSR 1758



 Score = 35.0 bits (79), Expect = 0.020
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 11/128 (8%)

Query: 5    QHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRR--SGTRRRRPPRTAP 62
            Q S+   RR +   TRRR R  S   T    + ++S    + RRR  SG   R P R   
Sbjct: 1771 QRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQES 1830

Query: 63   TCSGAPRTRCTACTARSRSP----RRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPA 118
            + + + R R      RSR+P    +R  SR S A  + SR        +   S  PL+  
Sbjct: 1831 SRTSSRRRR-----GRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISR 1885

Query: 119  RTLTSSFS 126
            R   S  S
Sbjct: 1886 RRSRSRTS 1893



 Score = 34.7 bits (78), Expect = 0.026
 Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 12  RRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTR 71
           RR R      R+R P   + RG  RS Q   PG SR R+ T+RR   R+A       R+ 
Sbjct: 514 RRSRSAQRWGRSRSP---QRRGRSRSPQ--RPGWSRSRN-TQRRGRSRSARRGRSHSRSP 567

Query: 72  CTACTARSRSPRRRTSRLSAADTR 95
            T   +RSR+P RR    S    R
Sbjct: 568 ATRGRSRSRTPARRGRSRSRTPAR 591



 Score = 33.5 bits (75), Expect = 0.058
 Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 8/98 (8%)

Query: 6   HSQCDKRR-GRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTR-------RRRP 57
           HS    RR GR        RG S  RT      ++S  P   R RS  R       +RR 
Sbjct: 473 HSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRG 532

Query: 58  PRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAADTR 95
              +P   G  R+R T    RSRS RR  S   +  TR
Sbjct: 533 RSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATR 570



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 21/78 (26%)

Query: 24   RGPSPPRTRGTPRSAQSSHPGSSRR-RSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSP 82
            RGPSP  +  T  S +  HP  SR  R G+R    P+T                 +SR+P
Sbjct: 1645 RGPSPEGSSSTESSPE--HPPKSRTARRGSRSSPEPKT-----------------KSRTP 1685

Query: 83   -RRRTSRLSAADTRFSRL 99
             RRR+SR S   TR +RL
Sbjct: 1686 PRRRSSRSSPELTRKARL 1703



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 19   TRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTAR 78
            T RR R PSP      PR  Q S   S R ++ T RRR    +   +   R R     +R
Sbjct: 1756 TSRRGRSPSPK-----PRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQR---SRSR 1807

Query: 79   SRSPRRR 85
            SR  RRR
Sbjct: 1808 SRVTRRR 1814



 Score = 31.6 bits (70), Expect = 0.22
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 11  KRRGRDICTRRRTRGPSPPRTRGTPRS-AQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPR 69
           + R R    R R+R  +P R RG  RS   +   G SR R+  RR R     P   G  R
Sbjct: 646 RSRSRTPARRGRSRSRTPAR-RGRSRSRTPARRSGRSRSRTPARRGRSRSRTPR-RGRSR 703

Query: 70  TRCTACTAR--SRSPRRRTSRLSAADTR 95
           +R      R  SR+P+RR    S+++ +
Sbjct: 704 SRSLVRRGRSHSRTPQRRGRSGSSSERK 731



 Score = 30.0 bits (66), Expect = 0.65
 Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 17/116 (14%)

Query: 4   PQHSQCDKRRGRDICTRRRTRGPSPPRTR--------------GTPRSAQSSHPGSSRRR 49
           P   Q  K++ +D    RR+   SP R R                 R  +S  P S R+ 
Sbjct: 183 PTPKQKKKKKKKD--RGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKS 240

Query: 50  SGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRT-SRLSAADTRFSRLLFWAP 104
              +R+R   T P        R T+  + S S   R+ SR +AA T  + L   +P
Sbjct: 241 KDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSP 296



 Score = 29.6 bits (65), Expect = 0.84
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 11   KRRGRDICTR----RRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSG 66
            +RR R    R    +R+   SPP  R    S  SS    S     TR     RT P    
Sbjct: 2051 RRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALN 2110

Query: 67   APRTRCTACTARSRSPRRR 85
            + R  C +  + S +P  R
Sbjct: 2111 SSRMSCFSRPSMSPTPLDR 2129



 Score = 29.3 bits (64), Expect = 1.1
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 15/75 (20%)

Query: 21  RRTRGPSPPRTRGTPR-SAQSSHPGSS---RRRSGTRRRRPPRTAPTCSGAPRTRCTACT 76
           RR+R  S PR++   R S + S  GSS   +++S T    PPR + + S  P+       
Sbjct: 757 RRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQT----PPRRSRSGSSQPK------- 805

Query: 77  ARSRSPRRRTSRLSA 91
           A+SR+P RR+   S+
Sbjct: 806 AKSRTPPRRSRSSSS 820



 Score = 28.1 bits (61), Expect = 2.5
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 10/86 (11%)

Query: 7    SQCDKRRGRD-----ICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTA 61
            S   +RR R      I  R R+R P  PR R   RS     P + RRRS +R  R  R  
Sbjct: 2011 SPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRS-----PLAIRRRSRSRTPRTARGK 2065

Query: 62   PTCSGAPRTRCTACTARSRSPRRRTS 87
             + + +P        + S S R R++
Sbjct: 2066 RSLTRSPPAIRRRSASGSSSDRSRSA 2091



 Score = 27.3 bits (59), Expect = 4.2
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 26  PSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACT--------- 76
           P P     TP     S     R +S T    PPR +P+ S +P+ +  A           
Sbjct: 877 PDPELKSRTPSRHSCSGSSPPRVKSST----PPRQSPSRSSSPQPKVKAIISPRQRSHSG 932

Query: 77  ARSRSPRRRTSRLSAADTR 95
           + S SP R TSR +   +R
Sbjct: 933 SSSPSPSRVTSRTTPRRSR 951



 Score = 26.2 bits (56), Expect = 9.3
 Identities = 18/58 (31%), Positives = 27/58 (46%)

Query: 19   TRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACT 76
            T RR+R  SP     +    + SH GSS   +  +   PPR + + S +P  +  A T
Sbjct: 946  TPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQT 1003


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 43.5 bits (101), Expect = 6e-05
 Identities = 34/78 (43%), Positives = 38/78 (48%), Gaps = 13/78 (16%)

Query: 19  TRRRTRGPSPPRTRGTPRSAQSSHPG----SSRRRSGTRRRRPPRTAPTCSGAPRTRCTA 74
           +R R+R PS  R R   RS   S+      S RRR   RRR PPR  P     PR R   
Sbjct: 286 SRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPP---PPRHR--- 339

Query: 75  CTARSRSPRRRTSRLSAA 92
              RSRSP RR  R SA+
Sbjct: 340 ---RSRSPVRRRRRSSAS 354



 Score = 38.5 bits (88), Expect = 0.002
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 15/122 (12%)

Query: 4   PQHSQCDKR---RGRDICTRRRT---RGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRP 57
           P H++  +R   R R    RRR    R PSP R   TP       P   R RS  RRRR 
Sbjct: 293 PSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRR--TPPRRMPPPPRHRRSRSPVRRRR- 349

Query: 58  PRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLL--FWAPGTQELESLPPL 115
            R++ + SG   +  ++ ++RSRSP ++  + +++  R +R L    +P  +     PP 
Sbjct: 350 -RSSASLSG---SSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPA 405

Query: 116 LP 117
            P
Sbjct: 406 TP 407



 Score = 37.0 bits (84), Expect = 0.005
 Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 11/108 (10%)

Query: 22  RTRGPS---PPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTAR 78
           R+R P    P RT   PR  +   P +S  R   RR RP   +P  +  P+TR +    +
Sbjct: 366 RSRSPPKKPPKRTSSPPRKTRRLSPSASPPR---RRHRP---SPPATPPPKTRHSPTPQQ 419

Query: 79  SRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPARTLTSSFS 126
           S   R R SR+S +  R S  +    GT++ ES  P    R +  S S
Sbjct: 420 SN--RTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSES 465



 Score = 35.8 bits (81), Expect = 0.012
 Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 13/114 (11%)

Query: 20  RRRTRGPSPPRTRGTPRSAQSSHPGSSRRRS----GTRRRRPPRTAPTCSGAPRTRCTAC 75
           RRR   PS   +    +  + + P   RRRS     TRRRR P  AP     PR R T  
Sbjct: 519 RRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAP----PPRRRRTPT 574

Query: 76  -TARSRSPRRRTSRLSAADTRFS----RLLFWAPGTQELESLPPLLPARTLTSS 124
              R R+P     R S +  R+S    R    +P  +   + PP  P R  + S
Sbjct: 575 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPS 628



 Score = 35.4 bits (80), Expect = 0.015
 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 9/88 (10%)

Query: 7   SQCDKRRGRDICTR-RRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGT---RRRRPPRTAP 62
           S   ++R ++   R RR R PSPP TR   R + S  P   RRR+ T   RRR P     
Sbjct: 530 SPSPRKRQKETSPRGRRRRSPSPPPTR--RRRSPSPAPPPRRRRTPTPPPRRRTPSPPPR 587

Query: 63  TCSGAPRTRCTACTAR---SRSPRRRTS 87
             S +PR        R   S  P+RRT+
Sbjct: 588 RRSPSPRRYSPPIQRRYSPSPPPKRRTA 615



 Score = 35.0 bits (79), Expect = 0.020
 Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 16/135 (11%)

Query: 20  RRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSG------TRRRRPPRTAPTCSGAPRTRCT 73
           +RR     PP+ R +P + + S   SS+ R G      TR  R P+     S +PR R  
Sbjct: 632 KRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAP 691

Query: 74  ACTA--------RSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPARTLTSSF 125
             ++         S SP+RR S   +  TR  R +   P  ++++      P      S 
Sbjct: 692 QTSSSPPPVRRGASSSPQRRQS--PSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSS 749

Query: 126 SLLIGSHPLPRDPDP 140
           S  +   P P    P
Sbjct: 750 SRSVSGSPEPAAKKP 764



 Score = 29.6 bits (65), Expect = 0.84
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 5   QHSQCDKRRGRDICTRRRTRGPSPPRTRGTP--RSAQSSHPGSSRRRSGTRRRRP 57
           + S  +KR       RR++R PSP R R +P  R  + SH  S R R+ +R   P
Sbjct: 159 KESSREKRERSRSPRRRKSRSPSP-RRRSSPVRRERKRSHSRSPRHRTKSRSPSP 212



 Score = 26.6 bits (57), Expect = 7.1
 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 5/97 (5%)

Query: 49  RSGTRRRRPPRTAPTCSGAPRTRCTACT-----ARSRSPRRRTSRLSAADTRFSRLLFWA 103
           R    R R PR   + S +PR R +        + SRSPR RT   S +     +     
Sbjct: 163 REKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPE 222

Query: 104 PGTQELESLPPLLPARTLTSSFSLLIGSHPLPRDPDP 140
                ++   P +   T TS    +    P+P   +P
Sbjct: 223 LPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEP 259


>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
          Length = 1573

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 16/141 (11%)

Query: 2   WVPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTA 61
           WV ++++    +   + T + +R  SPP       +A ++   +SRR +    RRP   A
Sbjct: 631 WVTKNAKRPTTQPPVMPTTKHSRAQSPPDLTSQTTAALTTE--ASRRPTSEFTRRPTTEA 688

Query: 62  PTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQEL--ESLPPLLPAR 119
           P       T  T  T   ++PR RT++  A  T          G QE+  ES    +P  
Sbjct: 689 PQ----RWTSHTTATLTPQAPRERTTKTMAMLT--------TQGPQEMTSESTIKSIPQA 736

Query: 120 TLTSSFSLLIGSHPLPRDPDP 140
           +L  S  +  GS   P+DP P
Sbjct: 737 SLEPSAEIPEGSPESPKDPAP 757


>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
          Length = 1007

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 16  DICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTAC 75
           DI +RR     + P  R +P   +S  P   R RS  RR R PR     S +PR R    
Sbjct: 419 DILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRR---SRSPRRRDRGR 475

Query: 76  TARSRSPRRRTSR 88
            +RSR  RR  SR
Sbjct: 476 RSRSRLRRRSRSR 488



 Score = 37.7 bits (86), Expect = 0.003
 Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 20  RRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAP----------TCSGAPR 69
           RR  +  SP RT    R A+S      RR    RR   PRT P          +   +P 
Sbjct: 374 RRSKQSKSPSRTLSPGRRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPI 433

Query: 70  TRCTACTARSRSPRRRTSRLSAADTRFSR 98
            R +    RSRSP RR SR     +R  R
Sbjct: 434 NRWSPTRRRSRSPIRRRSRSPLRRSRSPR 462



 Score = 29.6 bits (65), Expect = 0.84
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 11  KRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGT------RRRRPPRTAPTC 64
           K   +D  + +  R PS    R   R + S  P    RRS +      R ++    + T 
Sbjct: 327 KSPSKDASSGKENRSPSRRPGRSPKRRSLSPKPRDKSRRSRSPLLNDRRSKQSKSPSRTL 386

Query: 65  SGAPRTRCTACTARSRSPRRRTSRLSAADTR 95
           S   R +  +   + R P RR  RLS+  TR
Sbjct: 387 SPGRRAKSRSLERKRREPERR--RLSSPRTR 415



 Score = 26.6 bits (57), Expect = 7.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 5/53 (9%)

Query: 3   VPQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRR 55
           + + S+   RR R    RRR+R P   R R   R ++S     SR R G RRR
Sbjct: 447 IRRRSRSPLRRSRS--PRRRSRSP---RRRDRGRRSRSRLRRRSRSRGGRRRR 494


>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 350

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 42/133 (31%), Positives = 51/133 (38%), Gaps = 27/133 (20%)

Query: 21  RRTRGPSPPRTRGTPRSAQSSHPGSSRRRS---GTRRRRPPRTAPTCSGAPRTRCTACTA 77
           RR  GPSPP     PRS    HP +   R+    T  R PP T P     P  R +   A
Sbjct: 121 RRRPGPSPPLQ---PRSR---HPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPA 174

Query: 78  RSRS----------PRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPARTLTSSFSL 127
           RSR+          PR R  R      R       +P  +E  SL P  P R      + 
Sbjct: 175 RSRTPGEAGPPRGDPRPRAPRPGDHPRR-------SPALRETPSLSPPSPGRR-NGKRAA 226

Query: 128 LIGSHPLPRDPDP 140
             G+ P P+ P P
Sbjct: 227 GKGTTPQPQPPPP 239


>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
          Length = 1984

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 24/76 (31%), Positives = 32/76 (42%)

Query: 13   RGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRC 72
            RG    ++R  RGPS  R       +  S    S R S  RR R P        + R+ C
Sbjct: 1628 RGLHSPSQRSHRGPSQRRHHSPSERSHRSPSERSHRSSSERRHRSPSQRSHRGPSERSHC 1687

Query: 73   TACTARSRSPRRRTSR 88
            +    R RSP +R+ R
Sbjct: 1688 SPSERRHRSPSQRSHR 1703



 Score = 31.6 bits (70), Expect = 0.22
 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 17/96 (17%)

Query: 6    HSQCDKRRGRDICTRRRTRGPSP-----PRTRGTPRSAQSSHPGSSRRRSGT-------- 52
            H    +RR R   ++R  RGPS      P  R     A+ SH   S R   +        
Sbjct: 1686 HCSPSERRHRSP-SQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHS 1744

Query: 53   ---RRRRPPRTAPTCSGAPRTRCTACTARSRSPRRR 85
               RR   P     CS + R+ C+    R RSP  R
Sbjct: 1745 PSERRHHSPSERSHCSPSERSHCSPSERRHRSPSER 1780



 Score = 28.5 bits (62), Expect = 1.9
 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 21   RRTRGPSPPRTRGTPRSAQSSHPGS-SRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARS 79
            R  RGPS  RTR  P       P   S+R S  RR   P     CS + +   +      
Sbjct: 1548 RTPRGPSE-RTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSSPSERSW 1606

Query: 80   RSPRRR 85
            RSP +R
Sbjct: 1607 RSPSQR 1612


>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
          Length = 2426

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 37/107 (34%), Positives = 46/107 (42%), Gaps = 13/107 (12%)

Query: 4    PQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGT--RRR------ 55
            P+H    + R R   + R  R     R+R TP     SH  S RRRS +  RRR      
Sbjct: 1895 PKHRSKSRERKRKRSSSRDNRKTVRARSR-TPSRRSRSHTPSRRRRSRSVGRRRSFSISP 1953

Query: 56   -RPPRTAPTCSGAPRTRCTACTARSRSPRRRT---SRLSAADTRFSR 98
             R  RT    S  P  R    + RSR+P RR+   SR S   +R  R
Sbjct: 1954 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRR 2000



 Score = 35.8 bits (81), Expect = 0.012
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 6    HSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCS 65
            H +  K + RD   + + R  S    R   + ++SS   S +R S +R R   R++ + S
Sbjct: 1800 HEKSKKNKNRDKGEKEKKRDSS---LRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856

Query: 66   GAPRTRCTACTARSRSPRRRTSRLSAADTRFSR 98
               +TR     +RSRS RRR S  S + +R  R
Sbjct: 1857 HRSQTR-----SRSRSRRRRRSSRSRSKSRGRR 1884



 Score = 33.9 bits (76), Expect = 0.045
 Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 16/94 (17%)

Query: 6    HSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPP-RTAPTC 64
            H+   +RR R +  RRR+   SP R   TP         S R R+ +RR R P R + T 
Sbjct: 1932 HTPSRRRRSRSV-GRRRSFSISPSRRSRTP---------SRRSRTPSRRSRTPSRRSRT- 1980

Query: 65   SGAPRTRCTACTARSRSP-RRRTSRLSAADTRFS 97
               P  R    + RSR+P RRR SR       FS
Sbjct: 1981 ---PSRRSRTPSRRSRTPSRRRRSRSVVRRRSFS 2011



 Score = 30.4 bits (67), Expect = 0.49
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 5    QHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTC 64
            + S+  + + R   +  R+R         + RS   S   S RRR  +R R   R   + 
Sbjct: 1827 KRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSV 1886

Query: 65   SGAPRTRCTACTARSRSPRRRTSRLSAADTR 95
            S   R R  +   RS+S  R+  R S+ D R
Sbjct: 1887 SKEKRKR--SPKHRSKSRERKRKRSSSRDNR 1915



 Score = 30.4 bits (67), Expect = 0.49
 Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 7/90 (7%)

Query: 5    QHSQCDKRRGRDICTRRRT---RGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTA 61
            + S+   RR R    R RT   R  +P R   TP S +S  P   RR     RRR    +
Sbjct: 1955 RRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTP-SRRSRTPSRRRRSRSVVRRRSFSIS 2013

Query: 62   PTCSGAPRTRCTACTARSRSP-RRRTSRLS 90
            P      R+R       SRSP RR+ SR S
Sbjct: 2014 PV--RLRRSRTPLRRRFSRSPIRRKRSRSS 2041



 Score = 28.1 bits (61), Expect = 2.5
 Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 5/114 (4%)

Query: 11   KRRGRDICTRRRTRG---PSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT-APTCSG 66
            +RR R   +R ++RG    S  + + +P+    S     +R S    R+  R  + T S 
Sbjct: 1868 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSR 1927

Query: 67   APRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART 120
              R+   +   RSRS  RR S  S + +R SR       T    S  P   +RT
Sbjct: 1928 RSRSHTPSRRRRSRSVGRRRS-FSISPSRRSRTPSRRSRTPSRRSRTPSRRSRT 1980


>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
          Length = 2303

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 37/107 (34%), Positives = 46/107 (42%), Gaps = 13/107 (12%)

Query: 4    PQHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGT--RRR------ 55
            P+H    + R R   + R  R     R+R TP     SH  S RRRS +  RRR      
Sbjct: 1895 PKHRSKSRERKRKRSSSRDNRKTVRARSR-TPSRRSRSHTPSRRRRSRSVGRRRSFSISP 1953

Query: 56   -RPPRTAPTCSGAPRTRCTACTARSRSPRRRT---SRLSAADTRFSR 98
             R  RT    S  P  R    + RSR+P RR+   SR S   +R  R
Sbjct: 1954 SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRR 2000



 Score = 35.8 bits (81), Expect = 0.012
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 6    HSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCS 65
            H +  K + RD   + + R  S    R   + ++SS   S +R S +R R   R++ + S
Sbjct: 1800 HEKSKKNKNRDKGEKEKKRDSS---LRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856

Query: 66   GAPRTRCTACTARSRSPRRRTSRLSAADTRFSR 98
               +TR     +RSRS RRR S  S + +R  R
Sbjct: 1857 HRSQTR-----SRSRSRRRRRSSRSRSKSRGRR 1884



 Score = 33.9 bits (76), Expect = 0.045
 Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 16/94 (17%)

Query: 6    HSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPP-RTAPTC 64
            H+   +RR R +  RRR+   SP R   TP         S R R+ +RR R P R + T 
Sbjct: 1932 HTPSRRRRSRSV-GRRRSFSISPSRRSRTP---------SRRSRTPSRRSRTPSRRSRT- 1980

Query: 65   SGAPRTRCTACTARSRSP-RRRTSRLSAADTRFS 97
               P  R    + RSR+P RRR SR       FS
Sbjct: 1981 ---PSRRSRTPSRRSRTPSRRRRSRSVVRRRSFS 2011



 Score = 30.4 bits (67), Expect = 0.49
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 5    QHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTC 64
            + S+  + + R   +  R+R         + RS   S   S RRR  +R R   R   + 
Sbjct: 1827 KRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSV 1886

Query: 65   SGAPRTRCTACTARSRSPRRRTSRLSAADTR 95
            S   R R  +   RS+S  R+  R S+ D R
Sbjct: 1887 SKEKRKR--SPKHRSKSRERKRKRSSSRDNR 1915



 Score = 30.4 bits (67), Expect = 0.49
 Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 7/90 (7%)

Query: 5    QHSQCDKRRGRDICTRRRT---RGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTA 61
            + S+   RR R    R RT   R  +P R   TP S +S  P   RR     RRR    +
Sbjct: 1955 RRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTP-SRRSRTPSRRRRSRSVVRRRSFSIS 2013

Query: 62   PTCSGAPRTRCTACTARSRSP-RRRTSRLS 90
            P      R+R       SRSP RR+ SR S
Sbjct: 2014 PV--RLRRSRTPLRRRFSRSPIRRKRSRSS 2041



 Score = 28.1 bits (61), Expect = 2.5
 Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 5/114 (4%)

Query: 11   KRRGRDICTRRRTRG---PSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT-APTCSG 66
            +RR R   +R ++RG    S  + + +P+    S     +R S    R+  R  + T S 
Sbjct: 1868 RRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSR 1927

Query: 67   APRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPART 120
              R+   +   RSRS  RR S  S + +R SR       T    S  P   +RT
Sbjct: 1928 RSRSHTPSRRRRSRSVGRRRS-FSISPSRRSRTPSRRSRTPSRRSRTPSRRSRT 1980


>gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo
          sapiens]
          Length = 262

 Score = 36.6 bits (83), Expect = 0.007
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 32 RGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRT 86
          +G PR A++  PG  RR     R RPPRT  + S + R        RS+  RRR+
Sbjct: 6  KGMPRKAETGPPGVFRRMP---RSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRS 57


>gi|239743289 PREDICTED: hypothetical protein XP_002342818 [Homo
          sapiens]
          Length = 104

 Score = 36.6 bits (83), Expect = 0.007
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 32 RGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRT 86
          +G PR A++  PG  RR     R RPPRT  + S + R        RS+  RRR+
Sbjct: 6  KGMPRKAETGPPGVFRRMP---RSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRS 57


>gi|119226260 calcium homeostasis endoplasmic reticulum protein
           [Homo sapiens]
          Length = 916

 Score = 36.2 bits (82), Expect = 0.009
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 19/130 (14%)

Query: 11  KRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGS-SRRRSGTRRRRPPRTAPTCSGAPR 69
           +R+G++    +R  GPS  R+R   R   SS   S S + SG+  R   R+        R
Sbjct: 725 RRKGQE----KRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSR 780

Query: 70  TRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPPLLPARTLTSSFSLLI 129
           +R  +   RSRS R R+   S      SR   ++PG +          +R+ T   S  +
Sbjct: 781 SRSRS---RSRSSRSRSRSQSR-----SRSKSYSPGRRRRSR------SRSPTPPSSAGL 826

Query: 130 GSHPLPRDPD 139
           GS+  P  PD
Sbjct: 827 GSNSAPPIPD 836



 Score = 28.9 bits (63), Expect = 1.4
 Identities = 17/53 (32%), Positives = 22/53 (41%)

Query: 9   CDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTA 61
           C +   R     R     S  R+R   RS   S+    RRRS +R   PP +A
Sbjct: 772 CSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSA 824


>gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]
          Length = 221

 Score = 35.8 bits (81), Expect = 0.012
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 12  RRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTR----RRRPPRTAPTCSGA 67
           RR R    RRR+R  S  R+R   RS  S     SR RS +R     R   R+    S  
Sbjct: 117 RRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSV 176

Query: 68  PRTRC-TACTARSRSPRRRTSRLSAADTR 95
            R+R  +   +RSRSP   + R S + +R
Sbjct: 177 SRSRSRSRSRSRSRSPPPVSKRESKSRSR 205



 Score = 32.7 bits (73), Expect = 0.100
 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 11/95 (11%)

Query: 12  RRGRDICTRRRTRGPSPPRTRG--------TPRSAQSSHPGSSRRRSGTRRRRPPRTAPT 63
           R GR   +    RGP P R  G        +PR  + S    SR RS +R R   R + +
Sbjct: 91  RYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRRRRRSR---SRSRSRSRSRSRSRYSRS 147

Query: 64  CSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSR 98
            S +     +  T++SRS RR  S+ S+     SR
Sbjct: 148 KSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSR 182


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 35.4 bits (80), Expect = 0.015
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 13  RGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRC 72
           RGR   TRR    P+P   RG+P   + +   ++   +GTR     R  P C G      
Sbjct: 110 RGRAAATRR---SPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGG------ 160

Query: 73  TACTARSRSPRRRTSRLSAADTRFSRLLFWAPG 105
           T+  A SR+ RR  S         SR     PG
Sbjct: 161 TSLGAGSRALRRPGSAALPRSPSSSRRWAAMPG 193



 Score = 29.6 bits (65), Expect = 0.84
 Identities = 34/134 (25%), Positives = 45/134 (33%), Gaps = 20/134 (14%)

Query: 24  RGPSPPRTRGTPRSAQSSHPGSS---------------RRRSGTRRRRPPRTAPTCSGAP 68
           RG SPP       +    HPG+                 R S    RR     P C    
Sbjct: 50  RGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAPG 109

Query: 69  RTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELES--LPPLLPARTLTSSFS 126
           R R  A T RS +P       +  +         + GT+ + +  LPP     +L +   
Sbjct: 110 RGR-AAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSLGAGSR 168

Query: 127 LL--IGSHPLPRDP 138
            L   GS  LPR P
Sbjct: 169 ALRRPGSAALPRSP 182


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 35.4 bits (80), Expect = 0.015
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 5   QHSQCDKRRGRDICTRRRTRGPSPPRTRGTPRSAQSS---HPGSSRRRSGTRRRRPPRTA 61
           +H   D++ G    +  R R  S  R+R T R ++S+     GS R RS  +RRR  R+A
Sbjct: 554 KHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSA 613

Query: 62  PTCSGAPRTRCTACTARSR 80
              S  P T  ++ + R R
Sbjct: 614 ---SPPPATSSSSSSRRER 629



 Score = 29.3 bits (64), Expect = 1.1
 Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 24/92 (26%)

Query: 11  KRRGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSR-----------------RRSGTR 53
           + R R+   RRR     PP T  +  S +  H G  R                 +RSG  
Sbjct: 599 RSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRGEKRSGDG 658

Query: 54  RRRPPRTAPTCSGAPRTRCTACTARSRSPRRR 85
             + P  AP  SG+     T+C    R  RRR
Sbjct: 659 SEKAPAPAPPPSGS-----TSC--GDRDSRRR 683



 Score = 28.1 bits (61), Expect = 2.5
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 8/60 (13%)

Query: 15  RDICTRRRTRG-----PSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPR 69
           R  C R  T G     P+PP    +  S+ S  P SS   S +    PP  AP    APR
Sbjct: 168 RPTCARHLTLGTGDGGPAPPPAPSSASSSPSPSPSSS---SPSPPPPPPPPAPPAPPAPR 224


>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
          Length = 360

 Score = 35.4 bits (80), Expect = 0.015
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 19  TRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTAR 78
           +R+R+R  S  R RG+ +  + S   +SR  S +  +   R A T  GA  +     T R
Sbjct: 129 SRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQ--GRKASTAPGAEASPSPCITER 186

Query: 79  SRSPRRRTSRLSAADTRFS 97
           S+   RR +R S++ +  S
Sbjct: 187 SKQKARRRTRSSSSSSSSS 205



 Score = 30.4 bits (67), Expect = 0.49
 Identities = 34/118 (28%), Positives = 45/118 (38%), Gaps = 31/118 (26%)

Query: 13  RGRDICTRRRTRG-----PSPPRTRGTPRSAQSSHP---------------GSSR---RR 49
           R RD     RT+G     PS P +R  PR   SS P               G +R     
Sbjct: 67  RARDGTWGVRTKGSGAALPSRPASRAAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAH 126

Query: 50  SGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQ 107
            G+R+R   R+        R+R      R +  R+ TSR  +A T   R    APG +
Sbjct: 127 VGSRKRSRSRS--------RSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAE 176


>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 13  RGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRR-RPPRTAPTCSGAPRTR 71
           R RD+   R        R     R  +   P S+RR    R   RP R AP   G     
Sbjct: 93  RTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPRAPRTPLRPERPAPGVPGGRVAP 152

Query: 72  CTACTARSRSPRRRTSRLS 90
           CT CT+ S SPR R  R+S
Sbjct: 153 CT-CTSGSPSPRPRRLRVS 170


>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 13  RGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRR-RPPRTAPTCSGAPRTR 71
           R RD+   R        R     R  +   P S+RR    R   RP R AP   G     
Sbjct: 93  RTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPRAPRTPLRPERPAPGVPGGRVAP 152

Query: 72  CTACTARSRSPRRRTSRLS 90
           CT CT+ S SPR R  R+S
Sbjct: 153 CT-CTSGSPSPRPRRLRVS 170


>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 35.0 bits (79), Expect = 0.020
 Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 13  RGRDICTRRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRR-RPPRTAPTCSGAPRTR 71
           R RD+   R        R     R  +   P S+RR    R   RP R AP   G     
Sbjct: 93  RTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPRAPRTPLRPERPAPGVPGGRVAP 152

Query: 72  CTACTARSRSPRRRTSRLS 90
           CT CT+ S SPR R  R+S
Sbjct: 153 CT-CTSGSPSPRPRRLRVS 170


>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
          Length = 778

 Score = 34.7 bits (78), Expect = 0.026
 Identities = 34/100 (34%), Positives = 38/100 (38%), Gaps = 18/100 (18%)

Query: 26  PSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRP---PRTAPTCSGAPRTR--------CTA 74
           P PP  R TP       PGS R   GT    P   PR +PT  G P T            
Sbjct: 492 PPPPSARSTPLPGP---PGSPRSSGGTPLHSPLHTPRASPT--GTPGTTPPPSPGGGVGG 546

Query: 75  CTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQELESLPP 114
              RSR    R S L +   RF R     P  +E+ SL P
Sbjct: 547 AAWRSRLNSIRNSFLGS--PRFHRRKMQVPTAEEMSSLTP 584


>gi|153252068 testes-specific heterogenous nuclear ribonucleoprotein
           G-T [Homo sapiens]
          Length = 392

 Score = 34.7 bits (78), Expect = 0.026
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 24  RGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPR 83
           RGP PPR+RG PR  + +  G      G  RR P R  P   G          +R+  P 
Sbjct: 94  RGPPPPRSRGRPRFLRGTRGG-----GGGPRRSPSRGGPDDDGGYTADFDLRPSRAPMPM 148

Query: 84  RR 85
           +R
Sbjct: 149 KR 150


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo
           sapiens]
          Length = 2161

 Score = 34.7 bits (78), Expect = 0.026
 Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 11/66 (16%)

Query: 26  PSPPRTR---GTPRSAQSSHPGSSRRRSGTRRRRP------PRTAPTCSGAPRTRCTACT 76
           PS P T+   GT RSA S  P  +R RS +R R P      PR  P+ SG PR      T
Sbjct: 474 PSAPTTKLSSGTLRSASS--PRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGT 531

Query: 77  ARSRSP 82
             S  P
Sbjct: 532 GGSGGP 537


>gi|169183867 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 203

 Score = 34.3 bits (77), Expect = 0.034
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 1/82 (1%)

Query: 24  RGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPR 83
           R  S    RG  R+A  +H  + +   G  RRR PR A     + R     C   + SP 
Sbjct: 73  REASTSGRRGAGRNAARAHLPAKKASRGRTRRRRPRAAAAAHASTRQLSQRCMLSALSPA 132

Query: 84  RRTSRLSAADTRFSRLLFWAPG 105
            R S  SA   R   +    PG
Sbjct: 133 SRPSS-SAGQRRAGSIESAGPG 153


>gi|239753821 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 192

 Score = 34.3 bits (77), Expect = 0.034
 Identities = 30/84 (35%), Positives = 37/84 (44%), Gaps = 9/84 (10%)

Query: 4   PQHSQCDKRRGRDICTRRRTRGPSPPRT---RGTPRSAQSSHPGSSRRRSGTR--RRRPP 58
           PQH    + R R  CT R  R P PP T   R +P +A ++      R    R  R R P
Sbjct: 109 PQH--ITQLRARKACTHREPRAPLPPYTSTRRASPAAAAAAILLLPARLPQLRMPRARAP 166

Query: 59  RTAPTCSGAPRTRCTACTARSRSP 82
           R AP  +G P  R  A  A   +P
Sbjct: 167 RPAP--AGQPPKRERAAAAPRSAP 188


>gi|16905517 FUS interacting protein (serine-arginine rich) 1
           isoform 2 [Homo sapiens]
          Length = 262

 Score = 33.9 bits (76), Expect = 0.045
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 15  RDICTRRRTRGPSPPRTRGTPRSAQSSH-PGSSRRRSGTRRRRPPRTAPTCSGAPRTRCT 73
           +++  + R+R  S  +TRGT ++   +H    SR    +R++ PPR+        R+R  
Sbjct: 189 KEMKAKSRSRSASHTKTRGTSKTDSKTHYKSGSRYEKESRKKEPPRSKSQSRSQSRSRSK 248

Query: 74  ACTARSRSPR 83
           + +    SP+
Sbjct: 249 SRSRSWTSPK 258


>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
          Length = 1597

 Score = 33.9 bits (76), Expect = 0.045
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 26  PSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRR 85
           P PP++RG  RS +  H  S    + TR      T P  + A RT     TARS      
Sbjct: 853 PLPPKSRGRSRSTRGGHMNSG-GHAKTRPACQDWTVPLPASAGRTSWPPATARSTESFTS 911

Query: 86  TSR 88
           TSR
Sbjct: 912 TSR 914


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 33.9 bits (76), Expect = 0.045
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 24   RGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAP 68
            RG +  R RG PR A S   G   RR+G+R R PPR A +    P
Sbjct: 1103 RGAAGSRERGPPRRAGSQERG-PLRRAGSRERIPPRRAGSRERGP 1146



 Score = 32.3 bits (72), Expect = 0.13
 Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 17/113 (15%)

Query: 3    VPQHSQCDKRRGRDICTRRRTRGPSPPRTRGT--PRSAQSSHPGS-----SRRRSGTRRR 55
            V Q    DK  GR   +R +       R RG   P S++   PG       R  +G+R R
Sbjct: 1052 VKQEDFRDKMMGRREDSREKMNRGEGSRDRGLVRPGSSREKVPGGLQGSQDRGAAGSRER 1111

Query: 56   RPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAADTRFSRLLFWAPGTQE 108
             PPR A +    P  R     +R R P RR         R        PG++E
Sbjct: 1112 GPPRRAGSQERGPLRR---AGSRERIPPRRAGSRERGPPR-------GPGSRE 1154


>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
          Length = 394

 Score = 33.5 bits (75), Expect = 0.058
 Identities = 28/93 (30%), Positives = 33/93 (35%), Gaps = 27/93 (29%)

Query: 20  RRRTRGPSPPRTRGTPRSAQSSHPGSSRRRSGTRRRRPPRT----APTCSGAPRTRCT-- 73
           R +  G   P T G PR   +   G   RR+G RR RPP      AP     PR   T  
Sbjct: 116 RPQRGGVDLPATPGGPRGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPD 175

Query: 74  ---------------------ACTARSRSPRRR 85
                                 CTA+ R+P RR
Sbjct: 176 PSPPAGRPHGPAGRAAPGRRPGCTAQLRAPGRR 208


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.132    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,193,159
Number of Sequences: 37866
Number of extensions: 377563
Number of successful extensions: 4255
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 3131
Number of HSP's gapped (non-prelim): 1261
length of query: 140
length of database: 18,247,518
effective HSP length: 92
effective length of query: 48
effective length of database: 14,763,846
effective search space: 708664608
effective search space used: 708664608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.