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Search of human proteins with 239745655
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745655 PREDICTED: family with sequence similarity 157,
member C [Homo sapiens]
(387 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745655 PREDICTED: family with sequence similarity 157, mem... 808 0.0
gi|223646111 family with sequence similarity 157, member B [Homo... 770 0.0
gi|223646109 family with sequence similarity 157, member A [Homo... 764 0.0
gi|239743047 PREDICTED: similar to family with sequence similari... 763 0.0
gi|110347429 mediator complex subunit 12 [Homo sapiens] 46 6e-05
gi|38158015 mastermind-like 3 [Homo sapiens] 46 6e-05
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 44 2e-04
gi|22538413 forkhead box P2 isoform III [Homo sapiens] 44 2e-04
gi|149999352 forkhead box P2 isoform II [Homo sapiens] 44 2e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 43 4e-04
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 43 6e-04
gi|148922920 DENN/MADD domain containing 4B [Homo sapiens] 43 6e-04
gi|4507379 TATA box binding protein [Homo sapiens] 42 7e-04
gi|33286444 mastermind-like 2 [Homo sapiens] 42 0.001
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 42 0.001
gi|55956910 meningioma 1 [Homo sapiens] 41 0.002
gi|40354197 THAP domain containing 11 [Homo sapiens] 41 0.002
gi|56118214 zinc finger protein 161 [Homo sapiens] 41 0.002
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 40 0.003
gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo s... 40 0.004
gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 40 0.004
gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 40 0.004
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 40 0.004
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 40 0.004
gi|56549696 E1A binding protein p400 [Homo sapiens] 40 0.004
gi|187171277 DNA-directed DNA polymerase gamma [Homo sapiens] 40 0.005
gi|4505937 DNA-directed DNA polymerase gamma [Homo sapiens] 40 0.005
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens] 40 0.005
gi|27886520 nuclear factor of activated T-cells 5 isoform a [Hom... 40 0.005
gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo... 40 0.005
>gi|239745655 PREDICTED: family with sequence similarity 157, member
C [Homo sapiens]
Length = 387
Score = 808 bits (2088), Expect = 0.0
Identities = 387/387 (100%), Positives = 387/387 (100%)
Query: 1 MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQ 60
MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQ
Sbjct: 1 MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQ 60
Query: 61 KPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVK 120
KPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVK
Sbjct: 61 KPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVK 120
Query: 121 KAFRFSASPGCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAFPTKCIWIHRRGE 180
KAFRFSASPGCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAFPTKCIWIHRRGE
Sbjct: 121 KAFRFSASPGCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAFPTKCIWIHRRGE 180
Query: 181 ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP 240
ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP
Sbjct: 181 ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP 240
Query: 241 TGTPERAQPPPPQDLLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK 300
TGTPERAQPPPPQDLLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK
Sbjct: 241 TGTPERAQPPPPQDLLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK 300
Query: 301 VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN 360
VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN
Sbjct: 301 VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN 360
Query: 361 LVFFIDSPTVIAVPDLQCPTKYSGILY 387
LVFFIDSPTVIAVPDLQCPTKYSGILY
Sbjct: 361 LVFFIDSPTVIAVPDLQCPTKYSGILY 387
>gi|223646111 family with sequence similarity 157, member B [Homo
sapiens]
Length = 384
Score = 770 bits (1988), Expect = 0.0
Identities = 373/387 (96%), Positives = 377/387 (97%), Gaps = 3/387 (0%)
Query: 1 MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQ 60
MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGN+TMIRHTCPMSVPLSRQVKEVAAQ
Sbjct: 1 MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNSTMIRHTCPMSVPLSRQVKEVAAQ 60
Query: 61 KPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVK 120
KPSEDIYKN +Q++QQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSH FVK
Sbjct: 61 KPSEDIYKN---RQRRQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHPFVK 117
Query: 121 KAFRFSASPGCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAFPTKCIWIHRRGE 180
KAFRFSA PGC RPSSNKMLRSMGGGQRP GLGSEFFRLLHDLHLLAF TK IWIHRRGE
Sbjct: 118 KAFRFSAGPGCRRPSSNKMLRSMGGGQRPMGLGSEFFRLLHDLHLLAFATKRIWIHRRGE 177
Query: 181 ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP 240
ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP
Sbjct: 178 ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP 237
Query: 241 TGTPERAQPPPPQDLLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK 300
TGTPERAQPPPPQD LGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK
Sbjct: 238 TGTPERAQPPPPQDPLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK 297
Query: 301 VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN 360
VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN
Sbjct: 298 VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN 357
Query: 361 LVFFIDSPTVIAVPDLQCPTKYSGILY 387
LVFFIDSPTVIAVPDLQCPTKYSGILY
Sbjct: 358 LVFFIDSPTVIAVPDLQCPTKYSGILY 384
>gi|223646109 family with sequence similarity 157, member A [Homo
sapiens]
Length = 383
Score = 764 bits (1974), Expect = 0.0
Identities = 370/387 (95%), Positives = 373/387 (96%), Gaps = 4/387 (1%)
Query: 1 MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQ 60
MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGN+TMIRHTCPMSVPLSRQVKEVAAQ
Sbjct: 1 MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNSTMIRHTCPMSVPLSRQVKEVAAQ 60
Query: 61 KPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVK 120
KPSEDIYKNW QQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSH FVK
Sbjct: 61 KPSEDIYKNW----QQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHPFVK 116
Query: 121 KAFRFSASPGCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAFPTKCIWIHRRGE 180
KAFRFSA GCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAF K IWIHRRGE
Sbjct: 117 KAFRFSAGSGCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAFAMKRIWIHRRGE 176
Query: 181 ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP 240
ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP
Sbjct: 177 ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP 236
Query: 241 TGTPERAQPPPPQDLLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK 300
TGTPERAQPPPPQD LGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK
Sbjct: 237 TGTPERAQPPPPQDPLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK 296
Query: 301 VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN 360
VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPL+CQKQRGAS SSGQH GRVN
Sbjct: 297 VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLRCQKQRGASASSGQHEGRVN 356
Query: 361 LVFFIDSPTVIAVPDLQCPTKYSGILY 387
LVFFI SPTVIAVPDLQCPTKYSG+LY
Sbjct: 357 LVFFIGSPTVIAVPDLQCPTKYSGMLY 383
>gi|239743047 PREDICTED: similar to family with sequence similarity
157, member B [Homo sapiens]
Length = 384
Score = 763 bits (1970), Expect = 0.0
Identities = 371/387 (95%), Positives = 374/387 (96%), Gaps = 3/387 (0%)
Query: 1 MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQ 60
MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGN+TMIRHTCPMSVPLSRQVKEVAAQ
Sbjct: 1 MGPLFTTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNSTMIRHTCPMSVPLSRQVKEVAAQ 60
Query: 61 KPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVK 120
KPSEDIYKN RR++QQQQQQQQQQQ LDLLFHQRIQISLWP KQKRRKTEQHSH FVK
Sbjct: 61 KPSEDIYKNRRRRRQQQQQQQQQQQ---LDLLFHQRIQISLWPCKQKRRKTEQHSHPFVK 117
Query: 121 KAFRFSASPGCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAFPTKCIWIHRRGE 180
KAFRFSA PGCGRPSSNKMLRSMGGGQRP GLGSEFFRLLHDLHLLAF K IWIHRRGE
Sbjct: 118 KAFRFSAGPGCGRPSSNKMLRSMGGGQRPMGLGSEFFRLLHDLHLLAFAMKRIWIHRRGE 177
Query: 181 ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIP 240
ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYA GAVIP
Sbjct: 178 ATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYARGAVIP 237
Query: 241 TGTPERAQPPPPQDLLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK 300
TGTPERAQPPPPQD LGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK
Sbjct: 238 TGTPERAQPPPPQDPLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSCGFMVPEAARGK 297
Query: 301 VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN 360
VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN
Sbjct: 298 VFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVN 357
Query: 361 LVFFIDSPTVIAVPDLQCPTKYSGILY 387
LVFFIDSPTVIAVPDLQCPTKYSGILY
Sbjct: 358 LVFFIDSPTVIAVPDLQCPTKYSGILY 384
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 45.8 bits (107), Expect = 6e-05
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 34 LGNATMIRHTCPMSVP-LSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLL 92
L MI PMS + V+ A + + ++QQQQQQQQQQQQQQQQ +
Sbjct: 2021 LQQTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIR 2080
Query: 93 FHQRIQISLWPRKQKRRKTEQ 113
Q+ QI ++Q++++ +Q
Sbjct: 2081 QQQQQQILRQQQQQQQQQQQQ 2101
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQ 98
+Q + Q+ + + + ++QQQQQQQQQQQQQQQQ HQ+ Q
Sbjct: 2074 QQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQ 2120
Score = 37.7 bits (86), Expect = 0.018
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 71 RRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTE 112
++QQQQQQQQQQQQQQQQ Q+ Q + P+ Q + + +
Sbjct: 2095 QQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQ 2136
Score = 37.0 bits (84), Expect = 0.030
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 50 LSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRR 109
L Q ++ Q+ + + ++QQQQQQ +QQQQQQ+ L Q+ Q ++Q+++
Sbjct: 2048 LPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQI-LRQQQQQQQQQQQQQQQQQ 2106
Query: 110 KTEQHSHSFVKKAFRFSASPGCGRPSSNKMLRSMG 144
+ +Q ++ + A+P +P S + G
Sbjct: 2107 QQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQG 2141
Score = 35.8 bits (81), Expect = 0.067
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 42 HTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISL 101
H P+ + ++AQ + +QQQQQQQQQQQQQQ Q+ Q
Sbjct: 2018 HQTLQQTPMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQY 2077
Query: 102 WPRKQKRRK 110
R+Q++++
Sbjct: 2078 HIRQQQQQQ 2086
Score = 29.3 bits (64), Expect = 6.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 40 IRHTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQ 84
IR + +Q ++ Q+ + + ++QQQQ QQQQQQQ
Sbjct: 2079 IRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 2123
>gi|38158015 mastermind-like 3 [Homo sapiens]
Length = 1133
Score = 45.8 bits (107), Expect = 6e-05
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
Query: 45 PMSVPLS-----RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
P++VP S Q+K++AAQ+ ++QQQQQQQQQQQQQQQQ
Sbjct: 454 PVAVPSSDMSPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQ 502
Score = 40.8 bits (94), Expect = 0.002
Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 17/121 (14%)
Query: 32 LLLGNATMIRHTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDL 91
L GN + H + LS+++ A + ++QQQQQQQQQQQQQQQQ
Sbjct: 593 LTYGNTKPLTH---FNADLSQRMTPPVANPNKNPLMPYIQQQQQQQQQQQQQQQQQQ--- 646
Query: 92 LFHQRIQISLWPRKQKRRKTEQHSHSFVKKAFRFSASPGCGRPSSNKMLRSMGGGQRPTG 151
P + + H K+ +P + L S G Q P G
Sbjct: 647 -----------PPPPQLQAPRAHLSEDQKRLLLMKQKGVMNQPMAYAALPSHGQEQHPVG 695
Query: 152 L 152
L
Sbjct: 696 L 696
Score = 35.0 bits (79), Expect = 0.11
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 72 RQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVKKAFRFSASP 129
+Q+QQ ++Q+QQQQQQ +L Q++Q S PR+ + + + V++ +F SP
Sbjct: 749 QQKQQFLREQRQQQQQQQQILAEQQLQQSHLPRQHLQPQRNPYP---VQQVNQFQGSP 803
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 43.9 bits (102), Expect = 2e-04
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 47 SVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQ 106
+V L +Q + +K E ++ +QQQQQQQQQQQQQQQQ Q+ Q ++Q
Sbjct: 127 AVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQ--QQQQQQQQQQQQQ 184
Query: 107 KRRKTEQH 114
++++ +QH
Sbjct: 185 QQQQQQQH 192
Score = 42.0 bits (97), Expect = 0.001
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 71 RRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQ 113
++QQQQQQQQQQQQQQQQ Q+ Q P KQ + + +Q
Sbjct: 161 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQ 203
Score = 39.7 bits (91), Expect = 0.005
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 50 LSRQVKEVAAQKPSEDIYKNWRRQQQ----QQQQQQQQQQQQQLDLLFHQRIQISLWPRK 105
L +Q + Q+ ++ YK + Q QQQQQQQQQQQQQ Q+ Q ++
Sbjct: 122 LQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 181
Query: 106 QKRRKTEQHSH 116
Q++++ +Q H
Sbjct: 182 QQQQQQQQQQH 192
Score = 39.3 bits (90), Expect = 0.006
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 46 MSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
+ + L +Q ++ Q+ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 146 LHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 188
Score = 35.0 bits (79), Expect = 0.11
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQ---------QQQQQQQLDLLFHQRIQISLW 102
+Q ++ Q+ + + ++QQQQQQQQQ QQQQQQQ L Q++
Sbjct: 161 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQ 220
Query: 103 PRKQKRRKTEQHSHSFVKKAFRFSASPG 130
+ ++ + +QH S ++ S PG
Sbjct: 221 LLQMQQLQQQQHLLSLQRQGL-ISIPPG 247
>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
Length = 623
Score = 43.9 bits (102), Expect = 2e-04
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 47 SVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQ 106
+V L +Q + +K E ++ +QQQQQQQQQQQQQQQQ Q+ Q ++Q
Sbjct: 35 AVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQ--QQQQQQQQQQQQQ 92
Query: 107 KRRKTEQH 114
++++ +QH
Sbjct: 93 QQQQQQQH 100
Score = 42.0 bits (97), Expect = 0.001
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 71 RRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQ 113
++QQQQQQQQQQQQQQQQ Q+ Q P KQ + + +Q
Sbjct: 69 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQ 111
Score = 39.7 bits (91), Expect = 0.005
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 50 LSRQVKEVAAQKPSEDIYKNWRRQQQ----QQQQQQQQQQQQQLDLLFHQRIQISLWPRK 105
L +Q + Q+ ++ YK + Q QQQQQQQQQQQQQ Q+ Q ++
Sbjct: 30 LQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 89
Query: 106 QKRRKTEQHSH 116
Q++++ +Q H
Sbjct: 90 QQQQQQQQQQH 100
Score = 39.3 bits (90), Expect = 0.006
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 46 MSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
+ + L +Q ++ Q+ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 54 LHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 96
Score = 35.0 bits (79), Expect = 0.11
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQ---------QQQQQQQLDLLFHQRIQISLW 102
+Q ++ Q+ + + ++QQQQQQQQQ QQQQQQQ L Q++
Sbjct: 69 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQ 128
Query: 103 PRKQKRRKTEQHSHSFVKKAFRFSASPG 130
+ ++ + +QH S ++ S PG
Sbjct: 129 LLQMQQLQQQQHLLSLQRQGL-ISIPPG 155
>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
Length = 740
Score = 43.9 bits (102), Expect = 2e-04
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 47 SVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQ 106
+V L +Q + +K E ++ +QQQQQQQQQQQQQQQQ Q+ Q ++Q
Sbjct: 152 AVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQ--QQQQQQQQQQQQQ 209
Query: 107 KRRKTEQH 114
++++ +QH
Sbjct: 210 QQQQQQQH 217
Score = 42.0 bits (97), Expect = 0.001
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 71 RRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQ 113
++QQQQQQQQQQQQQQQQ Q+ Q P KQ + + +Q
Sbjct: 186 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQ 228
Score = 39.7 bits (91), Expect = 0.005
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 50 LSRQVKEVAAQKPSEDIYKNWRRQQQ----QQQQQQQQQQQQQLDLLFHQRIQISLWPRK 105
L +Q + Q+ ++ YK + Q QQQQQQQQQQQQQ Q+ Q ++
Sbjct: 147 LQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 206
Query: 106 QKRRKTEQHSH 116
Q++++ +Q H
Sbjct: 207 QQQQQQQQQQH 217
Score = 39.3 bits (90), Expect = 0.006
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 46 MSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
+ + L +Q ++ Q+ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 171 LHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 213
Score = 35.0 bits (79), Expect = 0.11
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQ---------QQQQQQQLDLLFHQRIQISLW 102
+Q ++ Q+ + + ++QQQQQQQQQ QQQQQQQ L Q++
Sbjct: 186 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQ 245
Query: 103 PRKQKRRKTEQHSHSFVKKAFRFSASPG 130
+ ++ + +QH S ++ S PG
Sbjct: 246 LLQMQQLQQQQHLLSLQRQGL-ISIPPG 272
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 43.1 bits (100), Expect = 4e-04
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKT 111
+Q+++ Q+ + + ++QQQQQQQ QQQQQQQQ+ LL R +S P++Q++++
Sbjct: 3938 QQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLS--PQQQQQQQV 3995
Query: 112 EQHSHSFVKKAFRFSASPGCGRPS 135
K FS SPG P+
Sbjct: 3996 ALGPGMPAKPLQHFS-SPGALGPT 4018
Score = 40.4 bits (93), Expect = 0.003
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 10 GAHSGPMRPL-PKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQ-KPSEDIY 67
G H + L K+ A R+ +A ++ + +Q+ +V Q K ++
Sbjct: 3533 GVHRKSRKALCAKQRTAKKAGREFPEADAEKLKLVTEQQSKIQKQLDQVRKQQKEHTNLM 3592
Query: 68 KNWRRQQQQQQQQQQQQQQQQLDLL 92
+R +QQQQQQQQQQQQQQ +L
Sbjct: 3593 AEYRNKQQQQQQQQQQQQQQHSAVL 3617
Score = 37.7 bits (86), Expect = 0.018
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 72 RQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQ 113
+QQQQ QQQQQ QQQQQ L Q++Q ++Q++++ +Q
Sbjct: 3901 QQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQ 3942
Score = 37.0 bits (84), Expect = 0.030
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 11 AHSGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQKPSEDIYKNW 70
+HSG PK +PM Q L + Q ++ Q+ + + +
Sbjct: 3882 SHSGQ----PKLSAQPMGSLQQLQQQQQL-------------QQQQQLQQQQQQQLQQQQ 3924
Query: 71 RRQQQQQQQQQQQQ--QQQQLDLLFHQRIQISLWPRKQKRRKTEQ 113
+ QQQQ QQQQQQQ QQQQ L Q+ Q+ ++Q+++ +Q
Sbjct: 3925 QLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQ 3969
Score = 36.2 bits (82), Expect = 0.051
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 45 PMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPR 104
PM Q ++ Q+ + + QQQQQ QQQQ QQQQQ L Q+ Q +
Sbjct: 3893 PMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQ 3952
Query: 105 KQKRRKTEQHSHSF 118
+Q +++ +Q F
Sbjct: 3953 QQLQQQQQQQQQQF 3966
Score = 31.2 bits (69), Expect = 1.7
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 8/48 (16%)
Query: 49 PLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQ--------QQQQQ 88
P SR ++E Q + + + QQQQQQQQQQQ QQQQQ
Sbjct: 3711 PDSRLLQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQ 3758
Score = 31.2 bits (69), Expect = 1.7
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 35 GNATMIRHTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQ-QQLDLLF 93
G+ + H + S Q K A S + ++ QQQQQ QQQQQQQ QQ L
Sbjct: 3868 GSMAGLSHLQQSLMSHSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQ 3927
Query: 94 HQRIQISLWPRKQKRRKTEQ 113
Q++Q ++ ++++ +Q
Sbjct: 3928 QQQLQQQQQQQQLQQQQQQQ 3947
Score = 30.8 bits (68), Expect = 2.2
Identities = 17/28 (60%), Positives = 18/28 (64%)
Query: 71 RRQQQQQQQQQQQQQQQQLDLLFHQRIQ 98
R Q Q+ QQQQQQQQQQ LL IQ
Sbjct: 3727 RMQLAQKLQQQQQQQQQQQHLLGQVAIQ 3754
Score = 29.3 bits (64), Expect = 6.3
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 10/46 (21%)
Query: 57 VAAQKPS--EDIYKNWRRQQQQQQQ--------QQQQQQQQQLDLL 92
VA++ P ED+ ++ +++ Q++QQ QQQQQQQQQ LL
Sbjct: 3241 VASELPLLIEDLLEHEKKELQKKQQLSAQLQPAQQQQQQQQQHSLL 3286
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 42.7 bits (99), Expect = 6e-04
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 55 KEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQI 99
KE +K ++ I ++QQQQQQQQQQQQQQQQ L + Q+
Sbjct: 1708 KEANRKKLADMIASRQQQQQQQQQQQQQQQQQQQAQTLAQAQAQV 1752
Score = 34.7 bits (78), Expect = 0.15
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 71 RRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKR 108
++QQQQQQQQQQQQQQ Q ++Q L Q++
Sbjct: 1726 QQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQ 1763
Score = 32.0 bits (71), Expect = 0.97
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 34 LGNATMIRHTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQ-----QQQQQ 88
LGN P S P K++A S + ++QQQQQQQQQQQ Q Q Q
Sbjct: 1693 LGNPIGANIASP-SEPKEANRKKLADMIASRQQQQQQQQQQQQQQQQQQQAQTLAQAQAQ 1751
Query: 89 LDLLFHQRIQ 98
+ Q +Q
Sbjct: 1752 VQAHLQQELQ 1761
Score = 29.6 bits (65), Expect = 4.8
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 60 QKPSEDIYKNWRRQQQQQQQQQQQQQQ 86
Q E I + +RQ QQQQQQ+ QQQQ
Sbjct: 3369 QSLQEAIQQQQQRQLQQQQQQKVQQQQ 3395
Score = 29.3 bits (64), Expect = 6.3
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 45 PMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPR 104
P+ P+ + + +P E K +QQQQQQQQQQQ Q+ Q +
Sbjct: 1692 PLGNPIGANI--ASPSEPKEANRKKLADMIASRQQQQQQQQQQQQQQQQQQQAQTLAQAQ 1749
Query: 105 KQKRRKTEQ 113
Q + +Q
Sbjct: 1750 AQVQAHLQQ 1758
>gi|148922920 DENN/MADD domain containing 4B [Homo sapiens]
Length = 1496
Score = 42.7 bits (99), Expect = 6e-04
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 72 RQQQQQQQQQQQQQQQQLDLLFHQRI---QISLWPRKQKRRKTEQHSHSFVKKAFRFSAS 128
RQQQQQQQQQQQQQQQQ + HQ Q + + + Q ++ ++ R AS
Sbjct: 894 RQQQQQQQQQQQQQQQQEQVSAHQEAGSSQAEPYLERPSPTRPLQRQTTWAGRSLRDPAS 953
Query: 129 PGCGRPSSNKMLRSMGGGQ 147
P GR + L S G Q
Sbjct: 954 PP-GRLVKSGSLGSARGAQ 971
Score = 28.9 bits (63), Expect = 8.2
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 70 WRRQQQQQQQQQQQQQQQQ 88
+R+ +++QQQQQQQQQQQ
Sbjct: 887 FRQPLRERQQQQQQQQQQQ 905
Score = 28.9 bits (63), Expect = 8.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 60 QKPSEDIYKNWRRQQQQQQQQQQQQ 84
++P + + ++QQQQQQQQQQ+Q
Sbjct: 888 RQPLRERQQQQQQQQQQQQQQQQEQ 912
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 42.4 bits (98), Expect = 7e-04
Identities = 50/172 (29%), Positives = 71/172 (41%), Gaps = 37/172 (21%)
Query: 63 SEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVKKA 122
S I + +RQQQQQQQQQQQQQQQQ Q+ Q ++Q++++ +Q + A
Sbjct: 48 SLSILEEQQRQQQQQQQQQQQQQQQQ------QQQQQQQQQQQQQQQQQQQQQQAVAAAA 101
Query: 123 FRFSASPGCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAFP---TKCIWIHRRG 179
+ S S + +S GQ P +L H L P T ++
Sbjct: 102 VQQSTSQQATQGTS---------GQAP--------QLFHSQTLTTAPLPGTTPLY----- 139
Query: 180 EATARPRAPEHPAPPATAVRGRDAASQNLKRRPGSG------TDGLRLQGAE 225
+ P P PA PA+ G QN+ G T LR + AE
Sbjct: 140 PSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAE 191
Score = 41.6 bits (96), Expect = 0.001
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 40 IRHTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
I++T +S+ +Q ++ Q+ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 43 IQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 91
Score = 40.0 bits (92), Expect = 0.004
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQIS 100
RQ ++ Q+ + + ++QQQQQQQQQQQQQQQQ + +Q S
Sbjct: 57 RQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQS 105
Score = 37.7 bits (86), Expect = 0.018
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 45 PMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
P + + + + Q+ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 40 PQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQ 83
Score = 37.4 bits (85), Expect = 0.023
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 45 PMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
P+ S + E ++ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 42 PIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 85
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 42.0 bits (97), Expect = 0.001
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 53 QVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTE 112
Q ++ Q+ + + ++QQQQQQQQQQQQQQ + Q+ Q S+ ++Q++++ +
Sbjct: 588 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQ 647
Query: 113 Q 113
Q
Sbjct: 648 Q 648
Score = 40.0 bits (92), Expect = 0.004
Identities = 20/28 (71%), Positives = 22/28 (78%)
Query: 61 KPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
KPS Y ++QQQQQQQQQQQQQQQQ
Sbjct: 580 KPSLLHYTQQQQQQQQQQQQQQQQQQQQ 607
Score = 39.7 bits (91), Expect = 0.005
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWP 103
+Q ++AQ+ + +QQQQQQQQQQQQQQQQ Q+ Q S P
Sbjct: 619 QQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQP 670
Score = 38.1 bits (87), Expect = 0.014
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 36 NATMIRHTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQ 95
N+ P +P + + + + + ++QQQQQQQQQQQQQQQQ Q
Sbjct: 563 NSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ----QQ 618
Query: 96 RIQISLWPRKQKRRKT 111
+ Q S+ ++Q+++++
Sbjct: 619 QQQSSISAQQQQQQQS 634
Score = 38.1 bits (87), Expect = 0.014
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 47 SVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
S+ +Q ++ ++ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 623 SISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQ 664
Score = 37.0 bits (84), Expect = 0.030
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQ-----QQQQQQLDLLFHQRIQISLWPRKQ 106
+Q ++ Q+ + + ++QQQQQQQQQQ QQQQQQ + Q+ Q ++Q
Sbjct: 591 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQ 650
Query: 107 KRRKTEQHSHSFVKKAFRFSASPGCGRPSSNKMLRS 142
++++ +Q ++ S+ P P S +LRS
Sbjct: 651 QQQQQQQQQQQQQQQP---SSQPAQSLP-SQPLLRS 682
Score = 32.7 bits (73), Expect = 0.57
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 60 QKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQK 107
Q+ + + ++QQQQQQQQQQQ Q L Q + S P +QK
Sbjct: 642 QQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQK 689
Score = 29.6 bits (65), Expect = 4.8
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQ-----QQQQQQQQQQLDLLFHQRIQISLWPRKQ 106
+Q ++ Q+ + + ++QQQQQ QQQQQQQQQQ Q+ Q ++Q
Sbjct: 608 QQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQ-----QQQQQQQQQQQQQ 662
Query: 107 KRRKTEQHSHSFVKKAFRFSASP 129
+++ + Q + S + S P
Sbjct: 663 QQQPSSQPAQSLPSQPLLRSPLP 685
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 41.6 bits (96), Expect = 0.001
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 49 PLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKR 108
P R + +A P + ++QQQQQQQQQQQQQQQQ Q+ + S PR+Q++
Sbjct: 37 PGPRHPEAASAAPPGASLLLLQQQQQQQQQQQQQQQQQQQ-----QQQQETS--PRQQQQ 89
Query: 109 RKTEQHS 115
++ E S
Sbjct: 90 QQGEDGS 96
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 41.2 bits (95), Expect = 0.002
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 62 PSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQ 113
P + ++QQQQQQQQQQQQQQQQ QR +L ++ R +Q
Sbjct: 517 PDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQ 568
Score = 39.7 bits (91), Expect = 0.005
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 23 HVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQ 82
H+ P A L + + P PL + + + + + ++QQQQQQQQQQ
Sbjct: 485 HLSPSAYPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQ 544
Query: 83 QQQQQQ 88
QQQQQQ
Sbjct: 545 QQQQQQ 550
Score = 39.7 bits (91), Expect = 0.005
Identities = 67/275 (24%), Positives = 97/275 (35%), Gaps = 54/275 (19%)
Query: 40 IRHTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQI 99
++H P L +Q ++ Q+ + +QQQQQQQQQQQQQ+Q L+ Q
Sbjct: 512 LQHPAPDHQSLQQQQQQQQQQQQQQ-------QQQQQQQQQQQQQQRQNAALMIKQMASR 564
Query: 100 SLWPRKQKRRKTEQHSHSFVKKAFRFSASP--GCGRPSSNKMLRSMGGGQRPT------- 150
+ R ++ + V + P G +P+ + S G G+ T
Sbjct: 565 NQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPH 624
Query: 151 -GLGSEFFRLLHDLHLLAFPTKCIWIHRRG----EATARPRAPEHPAPPATAVRG--RDA 203
S +F H P + R G A P P PP G
Sbjct: 625 LAQESAWFSGPHP------PPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRG 678
Query: 204 ASQNLKRRPGSG------TDGLRLQGAEPS-RLLRTYAGGAVIPTGTPERAQPPP----- 251
Q R PG G + GL+ G+ L++ G +P+ ER PPP
Sbjct: 679 PLQEPMRMPGEGHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATS 738
Query: 252 --------PQDLLGRRRWLSRNTWGPWPGTTQPPS 278
P GR ++T PG PPS
Sbjct: 739 ALGGQPGFPFGAAGR-----QSTPHSGPGVNSPPS 768
Score = 32.3 bits (72), Expect = 0.74
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 73 QQQQQQQQQQQQQQQQLDLLFHQ 95
QQQ QQQQQ QQQQQQ + F +
Sbjct: 294 QQQPQQQQQPQQQQQQHGVFFER 316
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 74 QQQQQQQQQQQQQQQLDLLFHQR 96
QQQ QQQQQ QQQQQ +F +R
Sbjct: 294 QQQPQQQQQPQQQQQQHGVFFER 316
Score = 29.3 bits (64), Expect = 6.3
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 72 RQQQQQQQQQQQQQQQ 87
+QQ QQQQQ QQQQQQ
Sbjct: 294 QQQPQQQQQPQQQQQQ 309
>gi|40354197 THAP domain containing 11 [Homo sapiens]
Length = 314
Score = 41.2 bits (95), Expect = 0.002
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 45 PMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
P PL + A++P+ R+QQQQQQQQQQQQQQQQ
Sbjct: 77 PTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQ 120
Score = 38.9 bits (89), Expect = 0.008
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 52 RQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
R AA++ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 93 RPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQ 129
Score = 38.5 bits (88), Expect = 0.010
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 50 LSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
++R+ AA + + + ++QQQQQQQQQQQQQQQQ
Sbjct: 90 VARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQ 128
Score = 37.0 bits (84), Expect = 0.030
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 55 KEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
++VA + + ++QQQQQQQQQQQQQQQQ
Sbjct: 88 RKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQ 121
Score = 37.0 bits (84), Expect = 0.030
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 58 AAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
A ++ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 100 ARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQ 130
Score = 37.0 bits (84), Expect = 0.030
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 60 QKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
Q+ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 104 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 132
>gi|56118214 zinc finger protein 161 [Homo sapiens]
Length = 521
Score = 41.2 bits (95), Expect = 0.002
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 42 HTCPMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISL 101
+TC + + +E + QK + +QQQQQQQQQQQQQQ Q + L
Sbjct: 317 NTCKQGISKTCMSEETSNQKQQQ-------QQQQQQQQQQQQQQQHVTSWPGKQVETLRL 369
Query: 102 WPRKQKRRKTE 112
W K RK E
Sbjct: 370 WEEAVKARKKE 380
Score = 35.8 bits (81), Expect = 0.067
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 53 QVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQ 106
Q + + + I K ++ Q+QQQQQQQQQ Q+ ++ WP KQ
Sbjct: 310 QSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQQQQQHVTSWPGKQ 363
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 40.4 bits (93), Expect = 0.003
Identities = 50/182 (27%), Positives = 71/182 (39%), Gaps = 16/182 (8%)
Query: 69 NWRRQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVKKAFRFSAS 128
N+ + QQQQQQQQQQQQQQQ Q+ Q+ P +Q +++ Q +
Sbjct: 256 NFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVP 315
Query: 129 PGCGRPSSNKMLRSMGGGQRPTGLGSEFFRLLHDLHLLAFPTKCIWIHRRGEATARPRAP 188
PG + S + G T ++ ++ L P + R AT + P
Sbjct: 316 PGWNQLPSGALQPPPAQGSLGTMTANQGWKKAP----LPGPMQQQLQARPSLATV--QTP 369
Query: 189 EHPAPPATAVRGRDAASQNLKRRPGSGTDGLRLQGAEPSRLLRTYAGGAVIPTGTPERAQ 248
HP PP G ASQ P G Q P +++ GG P+ P Q
Sbjct: 370 SHPPPPYPF--GSQQASQAHTNFPQMSNPG---QFTAPQ--MKSLQGG---PSRVPTPLQ 419
Query: 249 PP 250
P
Sbjct: 420 QP 421
Score = 38.1 bits (87), Expect = 0.014
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 6 TTIPGAHSGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMS-VPLSRQVKEVAAQKPSE 64
T P + S M PL + + ++Q + ++ PM V ++RQ+ A P
Sbjct: 207 TPRPASQSDAMDPL----LSGLHIQQQSHPSGSLAPPHHPMQPVSVNRQMNP--ANFPQL 260
Query: 65 DIYKNWRRQQQQQQQQQQQQQQQQ 88
+ ++QQQQQQQQQQQQQQQQ
Sbjct: 261 QQQQQQQQQQQQQQQQQQQQQQQQ 284
Score = 32.3 bits (72), Expect = 0.74
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 16/87 (18%)
Query: 9 PGAHSGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQKPSEDIYK 68
PG S P+ P + + P +++H P P +Q + Q+
Sbjct: 971 PGYPSQPVEQRPLQQMPPQ-----------LMQHVAPPPQPPQQQPQPQLPQQQQPP--- 1016
Query: 69 NWRRQQQQQQQQQQQQQQQQLDLLFHQ 95
Q Q QQQQQQQQQ + L+ Q
Sbjct: 1017 --PPSQPQSQQQQQQQQQMMMMLMMQQ 1041
Score = 30.4 bits (67), Expect = 2.8
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 22/82 (26%)
Query: 13 SGPMRPLPKKHVEPMAVRQLLLGNATMIRHTCPMSVPLSRQVKEVAAQKPSEDIYKNWRR 72
SG + P P ++P++V R P + P +Q ++ Q+ + ++
Sbjct: 233 SGSLAP-PHHPMQPVSVN----------RQMNPANFPQLQQQQQQQQQQQQQQ-----QQ 276
Query: 73 QQQQQQQQQ------QQQQQQQ 88
QQQQQQQQQ QQ QQQQ
Sbjct: 277 QQQQQQQQQLQARPPQQHQQQQ 298
>gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1662
Score = 40.0 bits (92), Expect = 0.004
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 50 LSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
L R +E A+ ++ + ++QQQQQQQQQQQQQQQQ
Sbjct: 1588 LLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQ 1626
Score = 40.0 bits (92), Expect = 0.004
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 64 EDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQIS 100
E +N +QQQQQQQQQQQQQQQQ Q+ Q++
Sbjct: 1594 ESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVA 1630
Score = 33.1 bits (74), Expect = 0.44
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 60 QKPSEDIYKNWRRQQQQQQQQQQQQQQ 86
Q+ + + ++QQQQQQQQQQQQQQ
Sbjct: 1602 QQQQQQQQQQQQQQQQQQQQQQQQQQQ 1628
>gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 40.0 bits (92), Expect = 0.004
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 50 LSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
L R +E A+ ++ + ++QQQQQQQQQQQQQQQQ
Sbjct: 1736 LLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQ 1774
Score = 40.0 bits (92), Expect = 0.004
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 64 EDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQIS 100
E +N +QQQQQQQQQQQQQQQQ Q+ Q++
Sbjct: 1742 ESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVA 1778
Score = 33.1 bits (74), Expect = 0.44
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 60 QKPSEDIYKNWRRQQQQQQQQQQQQQQ 86
Q+ + + ++QQQQQQQQQQQQQQ
Sbjct: 1750 QQQQQQQQQQQQQQQQQQQQQQQQQQQ 1776
>gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 40.0 bits (92), Expect = 0.004
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 50 LSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
L R +E A+ ++ + ++QQQQQQQQQQQQQQQQ
Sbjct: 1736 LLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQ 1774
Score = 40.0 bits (92), Expect = 0.004
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 64 EDIYKNWRRQQQQQQQQQQQQQQQQLDLLFHQRIQIS 100
E +N +QQQQQQQQQQQQQQQQ Q+ Q++
Sbjct: 1742 ESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVA 1778
Score = 33.1 bits (74), Expect = 0.44
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 60 QKPSEDIYKNWRRQQQQQQQQQQQQQQ 86
Q+ + + ++QQQQQQQQQQQQQQ
Sbjct: 1750 QQQQQQQQQQQQQQQQQQQQQQQQQQQ 1776
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 40.0 bits (92), Expect = 0.004
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 2 GPLFTTIPGAHSGPMR-PLPKKHVEPMAVRQLLLGNATMIR-HTCPMSVPLSRQVKEVAA 59
G L P A S P R P P V+ +R +L + R P ++ L+ Q K
Sbjct: 154 GALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLP 213
Query: 60 QKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
+ + ++QQQQQQQQQQQQQQQQ
Sbjct: 214 -----GLQQQQQQQQQQQQQQQQQQQQQQ 237
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 40.0 bits (92), Expect = 0.004
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 2 GPLFTTIPGAHSGPMR-PLPKKHVEPMAVRQLLLGNATMIR-HTCPMSVPLSRQVKEVAA 59
G L P A S P R P P V+ +R +L + R P ++ L+ Q K
Sbjct: 154 GALIPGDPQAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLP 213
Query: 60 QKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
+ + ++QQQQQQQQQQQQQQQQ
Sbjct: 214 -----GLQQQQQQQQQQQQQQQQQQQQQQ 237
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 40.0 bits (92), Expect = 0.004
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 36 NATMIRHTCPMSVPLSRQVKEVA----AQKPSEDI----YKNWRRQQQQQQQQQQQQQQQ 87
+A + + P+ P V +V+ Q P + I ++ R+QQQQQQQQQQQQQQQ
Sbjct: 2675 SAVVTTNLTPVQTPARSLVPQVSQATGVQLPGKTITPAHFQLLRQQQQQQQQQQQQQQQQ 2734
Query: 88 Q 88
Q
Sbjct: 2735 Q 2735
Score = 37.7 bits (86), Expect = 0.018
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 71 RRQQQQQQQQQQQQQQQQLDLLFHQRIQI 99
++QQQQQQQQQQQQQQQQ ++Q+
Sbjct: 2728 QQQQQQQQQQQQQQQQQQQQTTTTSQVQV 2756
Score = 37.4 bits (85), Expect = 0.023
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 56 EVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
++ Q+ + + ++QQQQQQQQQQQQQQQQ
Sbjct: 2715 QLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 2747
Score = 32.0 bits (71), Expect = 0.97
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 49 PLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQ 85
P Q+ Q+ + + ++QQQQQQQQQQQQQ
Sbjct: 2711 PAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 2747
>gi|187171277 DNA-directed DNA polymerase gamma [Homo sapiens]
Length = 1239
Score = 39.7 bits (91), Expect = 0.005
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 49 PLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
P+ + V++ P+ D RR+QQQQQQQQQQQQQ Q
Sbjct: 18 PVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQ 57
Score = 38.9 bits (89), Expect = 0.008
Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 45 PMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLL 92
P+ P V A PS+ RRQQQQQQQQQQQQQ QQ +L
Sbjct: 18 PVPAPGRWVSSSVPASDPSDG---QRRRQQQQQQQQQQQQQPQQPQVL 62
>gi|4505937 DNA-directed DNA polymerase gamma [Homo sapiens]
Length = 1239
Score = 39.7 bits (91), Expect = 0.005
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 49 PLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
P+ + V++ P+ D RR+QQQQQQQQQQQQQ Q
Sbjct: 18 PVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQ 57
Score = 38.9 bits (89), Expect = 0.008
Identities = 24/48 (50%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 45 PMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQLDLL 92
P+ P V A PS+ RRQQQQQQQQQQQQQ QQ +L
Sbjct: 18 PVPAPGRWVSSSVPASDPSDG---QRRRQQQQQQQQQQQQQPQQPQVL 62
>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
Length = 397
Score = 39.7 bits (91), Expect = 0.005
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 247 AQPPPPQDLLGRRRWLSRNTWGPWPGTTQPPSPQLLRNDWGSC 289
AQ PPPQ LLG W+ WG W G SP + GSC
Sbjct: 2 AQSPPPQSLLGHDHWIFAQGWG-WAGHWDSTSPASSSDSSGSC 43
>gi|27886520 nuclear factor of activated T-cells 5 isoform a [Homo
sapiens]
Length = 1455
Score = 39.7 bits (91), Expect = 0.005
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 71 RRQQQQQQQQQQQQQQQQLDLLF 93
+ QQQQQQQQQQQQQQQQ +LF
Sbjct: 1172 QEQQQQQQQQQQQQQQQQQSILF 1194
Score = 38.9 bits (89), Expect = 0.008
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 72 RQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQ 106
+QQQQQQQQQQQQQQQQ L +Q ++ KQ
Sbjct: 1174 QQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQ 1208
Score = 38.1 bits (87), Expect = 0.014
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 45 PMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
P +P S+Q +Q + N Q+QQQQQQQQQQQQQQ
Sbjct: 1144 PNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQ 1187
Score = 33.1 bits (74), Expect = 0.44
Identities = 55/250 (22%), Positives = 87/250 (34%), Gaps = 58/250 (23%)
Query: 57 VAAQKPSEDIYKNWRRQQQQQQQQQQQQ-------------------------------- 84
+ A + + + ++QQQQQQQQQQQQ
Sbjct: 1162 IVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNP 1221
Query: 85 ---QQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVKKAFRFSASPGCGRPSSNKMLR 141
Q+QQ +FHQ Q ++ P Q+++ + S S V +PG + S++
Sbjct: 1222 MANQEQQNQSIFHQ--QSNMAPMNQEQQPMQFQSQSTVSSL----QNPGPTQSESSQTPL 1275
Query: 142 SMGGGQ------RPTGLGSEFFRLLHDLHLLAFPTKCIWIHRRGEATARPR--------A 187
Q P+ + L + A T + P+ A
Sbjct: 1276 FHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGA 1335
Query: 188 PEHPAPPATAVRGRDAASQN-LKRRPGSG--TDGLRLQGAEPSRLLRTYAGGAVIPTGTP 244
P P AT + N L+ PGS T G+ L G + + +G A +P
Sbjct: 1336 TSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLM 1395
Query: 245 ERAQPPPPQD 254
+QP PQ+
Sbjct: 1396 AISQPGQPQN 1405
>gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo
sapiens]
Length = 1531
Score = 39.7 bits (91), Expect = 0.005
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 71 RRQQQQQQQQQQQQQQQQLDLLF 93
+ QQQQQQQQQQQQQQQQ +LF
Sbjct: 1248 QEQQQQQQQQQQQQQQQQQSILF 1270
Score = 38.9 bits (89), Expect = 0.008
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 72 RQQQQQQQQQQQQQQQQLDLLFHQRIQISLWPRKQ 106
+QQQQQQQQQQQQQQQQ L +Q ++ KQ
Sbjct: 1250 QQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQ 1284
Score = 38.1 bits (87), Expect = 0.014
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 45 PMSVPLSRQVKEVAAQKPSEDIYKNWRRQQQQQQQQQQQQQQQQ 88
P +P S+Q +Q + N Q+QQQQQQQQQQQQQQ
Sbjct: 1220 PNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQ 1263
Score = 33.1 bits (74), Expect = 0.44
Identities = 55/250 (22%), Positives = 87/250 (34%), Gaps = 58/250 (23%)
Query: 57 VAAQKPSEDIYKNWRRQQQQQQQQQQQQ-------------------------------- 84
+ A + + + ++QQQQQQQQQQQQ
Sbjct: 1238 IVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFSNQNTMATMASPKQPPPNMIFNPNQNP 1297
Query: 85 ---QQQQLDLLFHQRIQISLWPRKQKRRKTEQHSHSFVKKAFRFSASPGCGRPSSNKMLR 141
Q+QQ +FHQ Q ++ P Q+++ + S S V +PG + S++
Sbjct: 1298 MANQEQQNQSIFHQ--QSNMAPMNQEQQPMQFQSQSTVSSL----QNPGPTQSESSQTPL 1351
Query: 142 SMGGGQ------RPTGLGSEFFRLLHDLHLLAFPTKCIWIHRRGEATARPR--------A 187
Q P+ + L + A T + P+ A
Sbjct: 1352 FHSSPQIQLVQGSPSSQEQQVTLFLSPASMSALQTSINQQDMQQSPLYSPQNNMPGIQGA 1411
Query: 188 PEHPAPPATAVRGRDAASQN-LKRRPGSG--TDGLRLQGAEPSRLLRTYAGGAVIPTGTP 244
P P AT + N L+ PGS T G+ L G + + +G A +P
Sbjct: 1412 TSSPQPQATLFHNTAGGTMNQLQNSPGSSQQTSGMFLFGIQNNCSQLLTSGPATLPDQLM 1471
Query: 245 ERAQPPPPQD 254
+QP PQ+
Sbjct: 1472 AISQPGQPQN 1481
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,818,535
Number of Sequences: 37866
Number of extensions: 1071614
Number of successful extensions: 12144
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 6793
Number of HSP's gapped (non-prelim): 2551
length of query: 387
length of database: 18,247,518
effective HSP length: 104
effective length of query: 283
effective length of database: 14,309,454
effective search space: 4049575482
effective search space used: 4049575482
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.