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Search of human proteins with 239745482
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]
(449 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745482 PREDICTED: hypothetical protein [Homo sapiens] 931 0.0
gi|239745475 PREDICTED: similar to NPIP-like protein ENSP0000028... 627 e-180
gi|239745469 PREDICTED: nuclear pore complex interacting protein... 623 e-179
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 555 e-158
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho... 555 e-158
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 545 e-155
gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isofor... 461 e-130
gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo sapi... 419 e-117
gi|239745496 PREDICTED: hypothetical protein XP_002343477 [Homo ... 414 e-116
gi|193290184 hypothetical protein LOC339047 [Homo sapiens] 382 e-106
gi|148596994 nuclear pore complex interacting protein [Homo sapi... 358 4e-99
gi|239745607 PREDICTED: nuclear pore complex interacting protein... 343 2e-94
gi|239745494 PREDICTED: similar to NPIP-like protein ENSP0000034... 266 4e-71
gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo ... 261 9e-70
gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane d... 261 9e-70
gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane d... 261 9e-70
gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo sap... 251 1e-66
gi|115511026 acyl-CoA synthetase medium-chain family member 1 [H... 64 2e-10
gi|58082049 acyl-CoA synthetase medium-chain family member 2A [H... 58 2e-08
gi|239756507 PREDICTED: similar to Acyl-coenzyme A synthetase AC... 57 3e-08
gi|239756505 PREDICTED: similar to Acyl-coenzyme A synthetase AC... 57 3e-08
gi|157311624 acyl-CoA synthetase medium-chain family member 2B [... 57 3e-08
gi|157311622 acyl-CoA synthetase medium-chain family member 2B [... 57 3e-08
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 55 2e-07
gi|38505220 acyl-CoA synthetase medium-chain family member 5 [Ho... 51 2e-06
gi|42544132 SA hypertension-associated homolog isoform 1 [Homo s... 51 2e-06
gi|195947369 junction-mediating and regulatory protein [Homo sap... 50 5e-06
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 49 1e-05
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 47 4e-05
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 47 5e-05
>gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 931 bits (2405), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Query: 1 MLFRLNIFFFSPVLILQMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVIN 60
MLFRLNIFFFSPVLILQMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVIN
Sbjct: 1 MLFRLNIFFFSPVLILQMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVIN 60
Query: 61 SLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVS 120
SLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVS
Sbjct: 61 SLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVS 120
Query: 121 FLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITL 180
FLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITL
Sbjct: 121 FLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITL 180
Query: 181 RRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPP 240
RRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPP
Sbjct: 181 RRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPP 240
Query: 241 SARKPLCNWVRMAAAEHRHSSGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKT 300
SARKPLCNWVRMAAAEHRHSSGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKT
Sbjct: 241 SARKPLCNWVRMAAAEHRHSSGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKT 300
Query: 301 PPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLK 360
PPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLK
Sbjct: 301 PPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLK 360
Query: 361 ECLFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEA 420
ECLFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEA
Sbjct: 361 ECLFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEA 420
Query: 421 QQLPKPKRRRLSKLRTRHCTQAWAIRINP 449
QQLPKPKRRRLSKLRTRHCTQAWAIRINP
Sbjct: 421 QQLPKPKRRRLSKLRTRHCTQAWAIRINP 449
>gi|239745475 PREDICTED: similar to NPIP-like protein
ENSP00000283050 isoform 1 [Homo sapiens]
Length = 385
Score = 627 bits (1616), Expect = e-180
Identities = 313/369 (84%), Positives = 315/369 (85%), Gaps = 53/369 (14%)
Query: 117 LCVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKD 176
+ VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKG NKIGLKD
Sbjct: 34 ISVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKG-----------------NKIGLKD 76
Query: 177 VITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK-------------------- 216
VITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK
Sbjct: 77 VITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVS 136
Query: 217 ----------------QKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHS 260
+KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHS
Sbjct: 137 EAEENGKLDMKEIHTYKKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHS 196
Query: 261 SGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKEC 320
SGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKEC
Sbjct: 197 SGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKEC 256
Query: 321 PLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNL 380
PLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNL
Sbjct: 257 PLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNL 316
Query: 381 KTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRLSKLRTRHCT 440
KTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRLSKLRTRHCT
Sbjct: 317 KTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRLSKLRTRHCT 376
Query: 441 QAWAIRINP 449
QAWAIRINP
Sbjct: 377 QAWAIRINP 385
>gi|239745469 PREDICTED: nuclear pore complex interacting
protein-like 1 [Homo sapiens]
Length = 371
Score = 623 bits (1607), Expect = e-179
Identities = 312/367 (85%), Positives = 313/367 (85%), Gaps = 53/367 (14%)
Query: 119 VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVI 178
VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKG NKIGLKDVI
Sbjct: 22 VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKG-----------------NKIGLKDVI 64
Query: 179 TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK---------------------- 216
TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK
Sbjct: 65 TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVSEA 124
Query: 217 --------------QKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHSSG 262
+KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEH HSSG
Sbjct: 125 EENGKLDMKEIHTYKKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHCHSSG 184
Query: 263 LPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPL 322
LPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPL
Sbjct: 185 LPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPL 244
Query: 323 APLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKT 382
APLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKT
Sbjct: 245 APLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKT 304
Query: 383 PPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRLSKLRTRHCTQA 442
PPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRLSKLRTRHCTQA
Sbjct: 305 PPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRLSKLRTRHCTQA 364
Query: 443 WAIRINP 449
WAIRINP
Sbjct: 365 WAIRINP 371
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 555 bits (1429), Expect = e-158
Identities = 296/391 (75%), Positives = 302/391 (77%), Gaps = 49/391 (12%)
Query: 18 MVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVINSLAVYRHRETDFGVGVR 77
MVKLSIVLTPQFLSHDQ Q TKELQQHVKSVTCPCEYLRKVIN+LA + HR TDFG
Sbjct: 1 MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFG---- 56
Query: 78 DHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVSFLKTIFWSRNGHDGSMD 137
P H +II F Y I L VS LKTIFWSRNGHDGS D
Sbjct: 57 GSPWLH--------------VIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTD 102
Query: 138 VQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 197
VQQRAWRSNR RQ+GLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV
Sbjct: 103 VQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 162
Query: 198 TTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEH 257
TTKIN HDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARK LCNWVRMAAAEH
Sbjct: 163 TTKINHHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEH 222
Query: 258 RHSSGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNI 317
RHSSGLPYW YLTAETLKNRMG QPPPPTQQHSITDNSLSLKTPPECLLTPLPPS DDN+
Sbjct: 223 RHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNL 282
Query: 318 K---ECPLAPLPPS--------------PLPPSVDDNLK---ECLFVPLPPSPLPPSVDD 357
K EC L PLPPS PLPPS DDNLK ECL +PLPPS DD
Sbjct: 283 KTPPECVLTPLPPSADDNLKTPPECVLTPLPPSADDNLKTPPECLL-----TPLPPSADD 337
Query: 358 NLK---ECLFVPLPPSPL---PPSVDDNLKT 382
NLK ECL PLPPS L PPS DDNLKT
Sbjct: 338 NLKTPPECLLTPLPPSALPSAPPSADDNLKT 368
Score = 148 bits (373), Expect = 1e-35
Identities = 95/185 (51%), Positives = 105/185 (56%), Gaps = 32/185 (17%)
Query: 272 ETLKNRMGRQ--PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK---ECPLAPLP 326
+ LK RQ P PP+ S DN +KTP E L PLPPS DDN+K E L PLP
Sbjct: 880 DNLKTPSERQLTPLPPSAPPSADDN---IKTPAERLRGPLPPSADDNLKTPSERQLTPLP 936
Query: 327 PSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLK---ECLFVPLPPS------------- 370
PS PPS DDN+K PLPPS DDNLK E PLPPS
Sbjct: 937 PSA-PPSADDNIKTP--AERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPA 993
Query: 371 -----PLPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPK 425
PLPPS DDNLKTPPLATQEAE EKP KPKR R E+E P+PKR+R + + K
Sbjct: 994 ERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEPSRK 1053
Query: 426 PKRRR 430
PKRRR
Sbjct: 1054 PKRRR 1058
Score = 95.1 bits (235), Expect = 1e-19
Identities = 68/144 (47%), Positives = 71/144 (49%), Gaps = 49/144 (34%)
Query: 285 PTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK---ECPLAPLPPS------------- 328
P+ S DN LKT ECLL PLPPS DDN+K E L PLPPS
Sbjct: 356 PSAPPSADDN---LKTRAECLLHPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPA 412
Query: 329 -----PLPPSVDDNLK---ECLFVPLPPS------------------PLPPSVDDNLK-- 360
PLPPS DDNLK E PLPPS PLPPS DDNLK
Sbjct: 413 ERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTP 472
Query: 361 -ECLFVPLPPSPLPPSVDDNLKTP 383
E PLPPS PPS DDN+KTP
Sbjct: 473 SERQLTPLPPS-APPSADDNIKTP 495
Score = 95.1 bits (235), Expect = 1e-19
Identities = 72/160 (45%), Positives = 77/160 (48%), Gaps = 47/160 (29%)
Query: 272 ETLKNRMGRQ--PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK---ECPLAPLP 326
+ LK RQ P PP+ S DN +KTP E L PLPPS DDN+K E L PLP
Sbjct: 425 DNLKTPSERQLTPLPPSAPPSADDN---IKTPAERLRGPLPPSADDNLKTPSERQLTPLP 481
Query: 327 PS------------------PLPPSVDDNLK---ECLFVPLPPS--------------PL 351
PS PLPPS DDNLK E LPPS PL
Sbjct: 482 PSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTALPPSADDNIKTPAERLRGPL 541
Query: 352 PPSVDDNLK---ECLFVPLPPSPLPPSVDDNLKTPPLATQ 388
PPS DDNLK E PLPPS PPS DDN+KTP Q
Sbjct: 542 PPSADDNLKTPSERQLTPLPPSA-PPSADDNIKTPAFHPQ 580
Score = 94.0 bits (232), Expect = 3e-19
Identities = 69/137 (50%), Positives = 71/137 (51%), Gaps = 48/137 (35%)
Query: 282 PPPPTQQHSITDNSLSLKTPPECLLTPLPPSV--------DDNIK---ECPLAPLPPSPL 330
P PP S DN LKTPPECLLTPLPPS DDN+K EC L PL
Sbjct: 330 PLPP----SADDN---LKTPPECLLTPLPPSALPSAPPSADDNLKTRAECLL-----HPL 377
Query: 331 PPSVDDNLK---ECLFVPLPPS------------------PLPPSVDDNLK---ECLFVP 366
PPS DDNLK E PLPPS PLPPS DDNLK E P
Sbjct: 378 PPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTP 437
Query: 367 LPPSPLPPSVDDNLKTP 383
LPPS PPS DDN+KTP
Sbjct: 438 LPPS-APPSADDNIKTP 453
Score = 93.6 bits (231), Expect = 3e-19
Identities = 74/173 (42%), Positives = 78/173 (45%), Gaps = 64/173 (36%)
Query: 272 ETLKNRMGRQ--PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK---ECPLAPLP 326
+ LK RQ P PP+ S DN +KTP E L PLPPS DDN+K E L PLP
Sbjct: 383 DNLKTPSERQLTPLPPSAPPSADDN---IKTPAERLRGPLPPSADDNLKTPSERQLTPLP 439
Query: 327 PS------------------PLPPSVDDNLK---ECLFVPLPPS---------------- 349
PS PLPPS DDNLK E PLPPS
Sbjct: 440 PSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERL 499
Query: 350 --PLPPSVDDNLK---ECLFVPLPPS--------------PLPPSVDDNLKTP 383
PLPPS DDNLK E LPPS PLPPS DDNLKTP
Sbjct: 500 RGPLPPSADDNLKTPSERQLTALPPSADDNIKTPAERLRGPLPPSADDNLKTP 552
Score = 30.8 bits (68), Expect = 2.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 371 PLPPSVDDNLKTP 383
PLPPS DDNLKTP
Sbjct: 873 PLPPSADDNLKTP 885
>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
sapiens]
Length = 678
Score = 555 bits (1429), Expect = e-158
Identities = 296/391 (75%), Positives = 302/391 (77%), Gaps = 49/391 (12%)
Query: 18 MVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVINSLAVYRHRETDFGVGVR 77
MVKLSIVLTPQFLSHDQ Q TKELQQHVKSVTCPCEYLRKVIN+LA + HR TDFG
Sbjct: 1 MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFG---- 56
Query: 78 DHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVSFLKTIFWSRNGHDGSMD 137
P H +II F Y I L VS LKTIFWSRNGHDGS D
Sbjct: 57 GSPWLH--------------VIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTD 102
Query: 138 VQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 197
VQQRAWRSNR RQ+GLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV
Sbjct: 103 VQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 162
Query: 198 TTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEH 257
TTKIN HDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARK LCNWVRMAAAEH
Sbjct: 163 TTKINHHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEH 222
Query: 258 RHSSGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNI 317
RHSSGLPYW YLTAETLKNRMG QPPPPTQQHSITDNSLSLKTPPECLLTPLPPS DDN+
Sbjct: 223 RHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNL 282
Query: 318 K---ECPLAPLPPS--------------PLPPSVDDNLK---ECLFVPLPPSPLPPSVDD 357
K EC L PLPPS PLPPS DDNLK ECL +PLPPS DD
Sbjct: 283 KTPPECVLTPLPPSADDNLKTPPECVLTPLPPSADDNLKTPPECLL-----TPLPPSADD 337
Query: 358 NLK---ECLFVPLPPSPL---PPSVDDNLKT 382
NLK ECL PLPPS L PPS DDNLKT
Sbjct: 338 NLKTPPECLLTPLPPSALPSAPPSADDNLKT 368
Score = 151 bits (381), Expect = 1e-36
Identities = 104/224 (46%), Positives = 113/224 (50%), Gaps = 68/224 (30%)
Query: 272 ETLKNRMGRQ--PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK---ECPLAPLP 326
+ LK RQ P PP+ S DN +KTP E L PLPPS DDN+K E L PLP
Sbjct: 383 DNLKTPSERQLTPLPPSAPPSADDN---IKTPAERLRGPLPPSADDNLKTPSERQLTPLP 439
Query: 327 PS------------------PLPPSVDDNLK---ECLFVPLPPS---------------- 349
PS PLPPS DDNLK E PLPPS
Sbjct: 440 PSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERL 499
Query: 350 --PLPPSVDDNLK---ECLFVPLPPS------------------PLPPSVDDNLKTPPLA 386
PLPPS DDNLK E PLPPS PLPPS DDNLKTPPLA
Sbjct: 500 RGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPPLA 559
Query: 387 TQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRR 430
TQEAE EKP KPKR R E+E P+PKR+R + + KPKRRR
Sbjct: 560 TQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEPSRKPKRRR 603
Score = 96.7 bits (239), Expect = 4e-20
Identities = 92/257 (35%), Positives = 105/257 (40%), Gaps = 99/257 (38%)
Query: 272 ETLKNRMGRQ--PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK---ECPLAPLP 326
+ LK RQ P PP+ S DN +KTP E L PLPPS DDN+K E L PLP
Sbjct: 425 DNLKTPSERQLTPLPPSAPPSADDN---IKTPAERLRGPLPPSADDNLKTPSERQLTPLP 481
Query: 327 PS------------------PLPPSVDDNLK---ECLFVPLPPS---------------- 349
PS PLPPS DDNLK E PLPPS
Sbjct: 482 PSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERL 541
Query: 350 --PLPPSVDDNLK--------------------ECLFVPLPPSPLPPSVDD-NLKTPPLA 386
PLPPS DDNLK + PP P V D P
Sbjct: 542 RGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEPSRKPKR 601
Query: 387 TQEAEVE------------------KP------------PKPKRWRVDEVEQSPKPKRQR 416
+ A+VE KP P+PKR RV +VE S KPKR+R
Sbjct: 602 RRAADVEPSSPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDVEPSRKPKRRR 661
Query: 417 EAEAQ-QLPKPKRRRLS 432
A+ + LP+PKRRRLS
Sbjct: 662 AADVEPSLPEPKRRRLS 678
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 545 bits (1403), Expect = e-155
Identities = 290/375 (77%), Positives = 295/375 (78%), Gaps = 34/375 (9%)
Query: 18 MVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVINSLAVYRHRETDFGVGVR 77
MVKLSIVLTPQFLSHDQ Q TKELQQHVKSVTCPCEYLRKVIN+LA + HR TDFG
Sbjct: 1 MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFG---- 56
Query: 78 DHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVSFLKTIFWSRNGHDGSMD 137
P H III F Y I L VS LKTIFWSRNGHDGS D
Sbjct: 57 GSPWLH--------------IIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTD 102
Query: 138 VQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 197
VQQRAWRSNR RQ+GLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV
Sbjct: 103 VQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 162
Query: 198 TTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEH 257
TTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARK LCNWVRMAAAEH
Sbjct: 163 TTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEH 222
Query: 258 RHSSGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNI 317
RHSSGLPYW YLTAETLKNRMG QPPPPTQQH ITDNSLSLKTP ECLLTPLPPS DDN+
Sbjct: 223 RHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHCITDNSLSLKTPLECLLTPLPPSADDNL 282
Query: 318 KECPLAPLPPSPLPPSVDDNLK---ECLFVPLPPS---PLPPSVDDNLK---ECLFVPLP 368
K P L +PLPPS DDNLK ECL PLPPS PPS DDNLK ECL
Sbjct: 283 KTPPECLL--TPLPPSADDNLKTPPECLLTPLPPSAPPSAPPSADDNLKTRAECLL---- 336
Query: 369 PSPLPPSVDDNLKTP 383
PLPPS DDNLKTP
Sbjct: 337 -HPLPPSADDNLKTP 350
Score = 148 bits (373), Expect = 1e-35
Identities = 95/185 (51%), Positives = 105/185 (56%), Gaps = 32/185 (17%)
Query: 272 ETLKNRMGRQ--PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK---ECPLAPLP 326
+ LK RQ P PP+ S DN +KTP E L PLPPS DDN+K E L PLP
Sbjct: 898 DNLKTPSKRQLTPLPPSAPPSADDN---IKTPAERLRGPLPPSADDNLKTPSERQLTPLP 954
Query: 327 PSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLK---ECLFVPLPPS------------- 370
PS PPS DDN+K PLPPS DDNLK E PLPPS
Sbjct: 955 PSA-PPSADDNIKTP--AERLRGPLPPSADDNLKTPSERQLTPLPPSAPTSADDNIKTPA 1011
Query: 371 -----PLPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPK 425
PLPPS DDNLKTPPLATQEAE EKP KPKR R E+E P+PKR+R + + K
Sbjct: 1012 ERLRGPLPPSADDNLKTPPLATQEAEAEKPRKPKRQRAAEMEPPPEPKRRRVGDVEPSRK 1071
Query: 426 PKRRR 430
PKRRR
Sbjct: 1072 PKRRR 1076
Score = 96.3 bits (238), Expect = 5e-20
Identities = 72/159 (45%), Positives = 77/159 (48%), Gaps = 51/159 (32%)
Query: 272 ETLKNRMGRQ--PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK---ECPLAPLP 326
+ LK RQ P PP+ S DN +KTP E L PLPPS DDN+K E L PLP
Sbjct: 429 DNLKTPSERQLTPLPPSAPPSADDN---IKTPAERLRGPLPPSADDNLKTPSERQLTPLP 485
Query: 327 PS------------------PLPPSVDDNLK---ECLFVPLPPS---------------- 349
PS PLPPS DDNLK E PLPPS
Sbjct: 486 PSAPPSADDNIKTPAEHLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTTAEHL 545
Query: 350 --PLPPSVDDNLK---ECLFVPLPPSPLPPSVDDNLKTP 383
PLPPS DDNLK E PLPPS PPS DDN+KTP
Sbjct: 546 RGPLPPSADDNLKTPSERQLTPLPPS-APPSADDNIKTP 583
Score = 30.8 bits (68), Expect = 2.6
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 371 PLPPSVDDNLKTP 383
PLPPS DDNLKTP
Sbjct: 891 PLPPSADDNLKTP 903
>gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isoform 3
[Homo sapiens]
Length = 363
Score = 461 bits (1186), Expect = e-130
Identities = 255/398 (64%), Positives = 264/398 (66%), Gaps = 93/398 (23%)
Query: 58 VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCL 117
VIN+LA + H G G R P H II F R Y I+ T L
Sbjct: 22 VINTLADHHH----CGTGFRGSPWLH--------------FIIAFPRSYKVFIILWTVYL 63
Query: 118 CVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDV 177
+S LKTI WSRNGHDGS DVQQRAWRSNR RQ+G NKIGLKDV
Sbjct: 64 WMSLLKTILWSRNGHDGSTDVQQRAWRSNRCRQEG-----------------NKIGLKDV 106
Query: 178 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK--------------------- 216
ITL RHVETKVRAKIRKRKVTTKIN HDKINGKRKTA+
Sbjct: 107 ITLWRHVETKVRAKIRKRKVTTKINHHDKINGKRKTAKNHIRKLSMKECEHAEKERQVSE 166
Query: 217 ---------------QKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHSS 261
+KMFQRAQELRRRAEDYHK KIPPSARKPLCNWVRMAAAEHRHSS
Sbjct: 167 AEENGKLDMKEIHTYKKMFQRAQELRRRAEDYHKRKIPPSARKPLCNWVRMAAAEHRHSS 226
Query: 262 GLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECP 321
GLPYW YLTAETLKNRMGRQPPPPTQ HSITDNSLSLKTPPECLL PLPPS
Sbjct: 227 GLPYWPYLTAETLKNRMGRQPPPPTQ-HSITDNSLSLKTPPECLLRPLPPS--------- 276
Query: 322 LAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLK 381
VDDN+KEC PLPPSPLPPSVDDNLKECL PLPPSPLPPSVDDNLK
Sbjct: 277 ------------VDDNIKECPLAPLPPSPLPPSVDDNLKECLLAPLPPSPLPPSVDDNLK 324
Query: 382 TPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAE 419
TPPLATQEAE +KPPKPKRW VDEVEQSPKPKR R E
Sbjct: 325 TPPLATQEAEAKKPPKPKRWSVDEVEQSPKPKRWRADE 362
>gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo
sapiens]
Length = 380
Score = 419 bits (1078), Expect = e-117
Identities = 249/437 (56%), Positives = 262/437 (59%), Gaps = 130/437 (29%)
Query: 58 VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCL 117
VIN+LA + HR TDFG SP + III F R Y + T L
Sbjct: 22 VINTLADHHHRGTDFG-------------GSPW-----LRIIIAFPRSYKVVLTLWTVYL 63
Query: 118 CVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDV 177
+SFLKTIF S NGHD S DVQQRA RSNR RQ+G NKIGLKDV
Sbjct: 64 WLSFLKTIFQSENGHDVSTDVQQRARRSNRRRQEG-----------------NKIGLKDV 106
Query: 178 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQK------------------- 218
ITLRRHVETK RAKIRK KVTTKIN HDKINGKRKTA+KQK
Sbjct: 107 ITLRRHVETKGRAKIRKMKVTTKINHHDKINGKRKTAKKQKLSVKECEHAEKERQVSEAE 166
Query: 219 ---------------MFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHSSGL 263
MFQRAQELRRRAEDYHKCKIPPSARK LCNWVRMAAAEHRHSSGL
Sbjct: 167 ENGKLDMKEIHTYMKMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGL 226
Query: 264 PYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK---EC 320
PYW YLTAETLKNRMG QPPPPTQQHSITDNSLSLKTPPECLLTPLPPS DDN+K EC
Sbjct: 227 PYWPYLTAETLKNRMGHQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNLKTPPEC 286
Query: 321 PLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNL 380
L PLPPS PPS DDN L
Sbjct: 287 LLTPLPPS-APPSADDN------------------------------------------L 303
Query: 381 KTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQ---------------QLPK 425
KTPPLATQEAE EKPPKPKRWR E+E P+PKR+R AE + P+
Sbjct: 304 KTPPLATQEAEAEKPPKPKRWRAAEMESPPEPKRRRAAEVESPPEPKRRRAAEVEPSSPE 363
Query: 426 PKRRRLSKLRTRHCTQA 442
PKRRRLSKLRT HCTQA
Sbjct: 364 PKRRRLSKLRTGHCTQA 380
>gi|239745496 PREDICTED: hypothetical protein XP_002343477 [Homo
sapiens]
Length = 218
Score = 414 bits (1065), Expect = e-116
Identities = 195/198 (98%), Positives = 195/198 (98%)
Query: 252 MAAAEHRHSSGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPP 311
MAAAEHRHSSGLPYW YLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPP
Sbjct: 1 MAAAEHRHSSGLPYWPYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPP 60
Query: 312 SVDDNIKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSP 371
S DDNIKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSP
Sbjct: 61 SADDNIKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSP 120
Query: 372 LPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRL 431
LPPSVDDNLKTPPLATQEAE EKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRL
Sbjct: 121 LPPSVDDNLKTPPLATQEAEAEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRL 180
Query: 432 SKLRTRHCTQAWAIRINP 449
SKLRTRHCTQAWAIRINP
Sbjct: 181 SKLRTRHCTQAWAIRINP 198
>gi|193290184 hypothetical protein LOC339047 [Homo sapiens]
Length = 369
Score = 382 bits (980), Expect = e-106
Identities = 224/372 (60%), Positives = 241/372 (64%), Gaps = 87/372 (23%)
Query: 58 VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCL 117
VIN+LA +RHR TDFG SP ++II FLR Y F I CTS L
Sbjct: 22 VINTLADHRHRGTDFG-------------GSPW-----LLIITVFLRSYKFAISLCTSYL 63
Query: 118 CVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDV 177
CVSFLKTIF S+NGHDGS DVQQRA RSN RQ+G+ KI L+D+
Sbjct: 64 CVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGI-----------------KIVLEDI 106
Query: 178 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ-------------------- 217
TL R VETKVRAKIRK KVTTK+NRHDKINGKRKTA++
Sbjct: 107 FTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSE 166
Query: 218 ----------------KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHSS 261
+MFQRAQ LRRRAEDY++CKI PSARKPLCN VRMAA EHRHSS
Sbjct: 167 AEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSS 226
Query: 262 GLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK--- 318
GLPYW YLTAETLKNRMG QPPPPTQQHSI DNSLSLKTP EC+L PLPPS DDN+K
Sbjct: 227 GLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECVLYPLPPSADDNLKTPP 286
Query: 319 ECPLAPLPPSPLPPSVDDNLK---ECLFVPLPPSPLPPSVDDNLK---ECLFVPLPPSPL 372
EC L PLPPS L PS DDNLK ECL PLPPS DDNLK ECL PLPPS
Sbjct: 287 ECLLTPLPPSAL-PSADDNLKTPAECLLY-----PLPPSADDNLKTPPECLLTPLPPS-A 339
Query: 373 PPSVDDNLKTPP 384
PPS DDNLKTPP
Sbjct: 340 PPSADDNLKTPP 351
>gi|148596994 nuclear pore complex interacting protein [Homo
sapiens]
Length = 350
Score = 358 bits (920), Expect = 4e-99
Identities = 216/369 (58%), Positives = 231/369 (62%), Gaps = 100/369 (27%)
Query: 58 VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCL 117
VIN+LA +RHR TDFG SP ++II FLR Y F I CTS L
Sbjct: 22 VINTLADHRHRGTDFG-------------GSPW-----LLIITVFLRSYKFAISLCTSYL 63
Query: 118 CVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDV 177
CVSFLKTIF S+NGHDGS DVQQRA RSNR RQ+G+ KI L+D+
Sbjct: 64 CVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGI-----------------KIVLEDI 106
Query: 178 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ-------------------- 217
TL R VETKVRAKIRK KVTTK+NRHDKINGKRKTA++
Sbjct: 107 FTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSE 166
Query: 218 ----------------KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHSS 261
+MFQRAQ LRRRAEDY++CKI PSARKPLCN VRMAA EHRHSS
Sbjct: 167 AEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSS 226
Query: 262 GLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECP 321
GLPYW YLTAETLKNRMG QPPPPTQQHSI DNSLSLKTP ECLLTPLP
Sbjct: 227 GLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLP----------- 275
Query: 322 LAPLPPSPLPPSVDDNLK---ECLFVPLPPSPLPPSVDDNLK---ECLFVPLPPSPLPPS 375
PS LP S DDNLK ECL PLPPS DDNLK ECL PLPPS PPS
Sbjct: 276 -----PSALP-SADDNLKTPAECLLYPLPPS-----ADDNLKTPPECLLTPLPPSA-PPS 323
Query: 376 VDDNLKTPP 384
VDDNLKTPP
Sbjct: 324 VDDNLKTPP 332
>gi|239745607 PREDICTED: nuclear pore complex interacting
protein-like 2 [Homo sapiens]
Length = 265
Score = 343 bits (880), Expect = 2e-94
Identities = 180/230 (78%), Positives = 185/230 (80%), Gaps = 23/230 (10%)
Query: 58 VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCL 117
VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRR TF ILFCTS L
Sbjct: 23 VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82
Query: 118 CVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDV 177
CVSFLKTIFWSRNGHDGS DVQQRAWRSNRSRQK GNKIGLKDV
Sbjct: 83 CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQK-----------------GNKIGLKDV 125
Query: 178 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 237
ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK
Sbjct: 126 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 185
Query: 238 IPPSARKPLCNWVRM---AAAEHR---HSSGLPYWLYLTAETLKNRMGRQ 281
IPPSARKPLCNWV + A EH + L L A+ L+ M +
Sbjct: 186 IPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQALQREMAER 235
>gi|239745494 PREDICTED: similar to NPIP-like protein
ENSP00000346774 [Homo sapiens]
Length = 221
Score = 266 bits (679), Expect = 4e-71
Identities = 137/169 (81%), Positives = 142/169 (84%), Gaps = 6/169 (3%)
Query: 119 VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVI 178
VS LKTIFWSRNGHDGS DVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVI
Sbjct: 23 VSLLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVI 82
Query: 179 TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKI 238
TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKI
Sbjct: 83 TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKI 142
Query: 239 PPSARKPLCNWVRM---AAAEHR---HSSGLPYWLYLTAETLKNRMGRQ 281
PPSARK LCNWV + A EH + L L A+ L+ M +
Sbjct: 143 PPSARKALCNWVSLFVFLAFEHSLPGQDMDTFFSLQLCAQALQREMAER 191
>gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo
sapiens]
Length = 317
Score = 261 bits (667), Expect = 9e-70
Identities = 154/271 (56%), Positives = 171/271 (63%), Gaps = 71/271 (26%)
Query: 18 MVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVINSLAVYRHRETDFGVGVR 77
MVKLSIVLTP+FLSHDQ Q TKELQQHVKSVTCPCEYLRKVIN+LA +RHR TDFG
Sbjct: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFG---- 56
Query: 78 DHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVSFLKTIFWSRNGHDGSMD 137
SP ++II FLR Y F I CTS LCVSFLKTIF S+NGHDGS D
Sbjct: 57 ---------GSPW-----LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTD 102
Query: 138 VQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 197
VQQRA RSN RQ+G+ KI L+D+ TL R VETKVRAKIRK KV
Sbjct: 103 VQQRARRSNCRRQEGI-----------------KIVLEDIFTLWRQVETKVRAKIRKMKV 145
Query: 198 TTKINRHDKINGKRKTARKQ------------------------------------KMFQ 221
TTK+NRHDKINGKRKTA++ +MFQ
Sbjct: 146 TTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQ 205
Query: 222 RAQELRRRAEDYHKCKIPPSARKPLCNWVRM 252
RAQ LRRRAEDY++CKI PSARKPLCN V +
Sbjct: 206 RAQALRRRAEDYYRCKITPSARKPLCNRVSL 236
>gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane
domain-containing protein FLJ00285 [Homo sapiens]
Length = 317
Score = 261 bits (667), Expect = 9e-70
Identities = 154/271 (56%), Positives = 171/271 (63%), Gaps = 71/271 (26%)
Query: 18 MVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVINSLAVYRHRETDFGVGVR 77
MVKLSIVLTP+FLSHDQ Q TKELQQHVKSVTCPCEYLRKVIN+LA +RHR TDFG
Sbjct: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFG---- 56
Query: 78 DHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVSFLKTIFWSRNGHDGSMD 137
SP ++II FLR Y F I CTS LCVSFLKTIF S+NGHDGS D
Sbjct: 57 ---------GSPW-----LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTD 102
Query: 138 VQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 197
VQQRA RSNR RQ+G+ KI L+D+ TL R VETKVRAKI K KV
Sbjct: 103 VQQRARRSNRRRQEGI-----------------KIVLEDIFTLWRQVETKVRAKICKMKV 145
Query: 198 TTKINRHDKINGKRKTARKQ------------------------------------KMFQ 221
TTK+NRHDKINGKRKTA++ +MFQ
Sbjct: 146 TTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQ 205
Query: 222 RAQELRRRAEDYHKCKIPPSARKPLCNWVRM 252
RAQ LRRRAEDY++CKI PSARKPLCN V +
Sbjct: 206 RAQALRRRAEDYYRCKITPSARKPLCNRVSL 236
>gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane
domain-containing protein FLJ00285 [Homo sapiens]
Length = 317
Score = 261 bits (667), Expect = 9e-70
Identities = 154/271 (56%), Positives = 171/271 (63%), Gaps = 71/271 (26%)
Query: 18 MVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVINSLAVYRHRETDFGVGVR 77
MVKLSIVLTP+FLSHDQ Q TKELQQHVKSVTCPCEYLRKVIN+LA +RHR TDFG
Sbjct: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFG---- 56
Query: 78 DHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVSFLKTIFWSRNGHDGSMD 137
SP ++II FLR Y F I CTS LCVSFLKTIF S+NGHDGS D
Sbjct: 57 ---------GSPW-----LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTD 102
Query: 138 VQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 197
VQQRA RSNR RQ+G+ KI L+D+ TL R VETKVRAKI K KV
Sbjct: 103 VQQRARRSNRRRQEGI-----------------KIVLEDIFTLWRQVETKVRAKICKMKV 145
Query: 198 TTKINRHDKINGKRKTARKQ------------------------------------KMFQ 221
TTK+NRHDKINGKRKTA++ +MFQ
Sbjct: 146 TTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQ 205
Query: 222 RAQELRRRAEDYHKCKIPPSARKPLCNWVRM 252
RAQ LRRRAEDY++CKI PSARKPLCN V +
Sbjct: 206 RAQALRRRAEDYYRCKITPSARKPLCNRVSL 236
>gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo
sapiens]
Length = 224
Score = 251 bits (640), Expect = 1e-66
Identities = 121/137 (88%), Positives = 125/137 (91%)
Query: 116 CLCVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLK 175
C+C+S LKTI WSRNGHDGS DVQQRAWRSNR RQKGLRSICMHTKKRVSSF GNKIGLK
Sbjct: 23 CICMSLLKTILWSRNGHDGSTDVQQRAWRSNRCRQKGLRSICMHTKKRVSSFPGNKIGLK 82
Query: 176 DVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHK 235
DVITL RHVETKVRAKIRKRKVTTKIN HDKINGKRKTA+ QKMFQR QEL RRAEDYHK
Sbjct: 83 DVITLWRHVETKVRAKIRKRKVTTKINHHDKINGKRKTAKNQKMFQRVQELWRRAEDYHK 142
Query: 236 CKIPPSARKPLCNWVRM 252
KIPPSARKPLCNWV +
Sbjct: 143 RKIPPSARKPLCNWVSL 159
>gi|115511026 acyl-CoA synthetase medium-chain family member 1 [Homo
sapiens]
Length = 577
Score = 64.3 bits (155), Expect = 2e-10
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 17 QMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKV 58
++VK IVLTPQFLSHD+ Q TKELQQHVKSVT P +Y RKV
Sbjct: 509 EVVKAFIVLTPQFLSHDKDQLTKELQQHVKSVTAPYKYPRKV 550
>gi|58082049 acyl-CoA synthetase medium-chain family member 2A [Homo
sapiens]
Length = 577
Score = 57.8 bits (138), Expect = 2e-08
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 17 QMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKV 58
++VK +VL QFLSHD Q TKELQQHVKSVT P +Y RK+
Sbjct: 503 EVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 544
>gi|239756507 PREDICTED: similar to Acyl-coenzyme A synthetase
ACSM2B, mitochondrial isoform 2 [Homo sapiens]
Length = 571
Score = 57.4 bits (137), Expect = 3e-08
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 17 QMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKV 58
++VK ++L QFLSHD Q TKELQQHVKSVT P +Y RK+
Sbjct: 497 EVVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 538
>gi|239756505 PREDICTED: similar to Acyl-coenzyme A synthetase
ACSM2B, mitochondrial isoform 1 [Homo sapiens]
Length = 571
Score = 57.4 bits (137), Expect = 3e-08
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 17 QMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKV 58
++VK ++L QFLSHD Q TKELQQHVKSVT P +Y RK+
Sbjct: 497 EVVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 538
>gi|157311624 acyl-CoA synthetase medium-chain family member 2B
[Homo sapiens]
Length = 577
Score = 57.4 bits (137), Expect = 3e-08
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 17 QMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKV 58
++VK ++L QFLSHD Q TKELQQHVKSVT P +Y RK+
Sbjct: 503 EVVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 544
>gi|157311622 acyl-CoA synthetase medium-chain family member 2B
[Homo sapiens]
Length = 577
Score = 57.4 bits (137), Expect = 3e-08
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 17 QMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKV 58
++VK ++L QFLSHD Q TKELQQHVKSVT P +Y RK+
Sbjct: 503 EVVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 544
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 54.7 bits (130), Expect = 2e-07
Identities = 51/160 (31%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 282 PPPPTQQHSITDNSLSLKTPPECL-LTPLPPSVDDN--IKECPLAPLPP-SPLPPSVDDN 337
PPP S + L PPE L +PLP ++ + ++E PL+P P SPL P + +
Sbjct: 451 PPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESS 510
Query: 338 LKECLFVPLPPSPLPPSVDDNLKECLFVPLPP----SPLPPSVDDNLKTPPLATQEAEVE 393
F PL SPL P + L PL P SPL P +++ +PP +E
Sbjct: 511 P----FSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPP--PEELPTS 564
Query: 394 KPPKPKRWR--VDEVEQSPKPKRQREAEAQQLPKPKRRRL 431
PP+ R +E SP P+ E+ P P+ RL
Sbjct: 565 PPPEASRLSPPPEESPMSPPPE-----ESPMSPPPEASRL 599
Score = 43.5 bits (101), Expect = 4e-04
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Query: 256 EHRHSSGLPYWLYLTAETLKNRMGRQPP-----PPTQQHSITDNSLSLKTPPE------C 304
E +S LP L+L+ ++ + P PP + + S +PPE
Sbjct: 472 EELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPA 531
Query: 305 LLTPLPPSVDDN-----IKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNL 359
L TPL P + + +E PL+P PP LP S L P SP+ P +++
Sbjct: 532 LETPLSPPPEASPLSPPFEESPLSP-PPEELPTSPPPEASR-LSPPPEESPMSPPPEESP 589
Query: 360 KEC------LFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPK 413
LF P SPL P +++ +PP + + + PP ++ SP P+
Sbjct: 590 MSPPPEASRLFPPFEESPLSPPPEESPLSPP--PEASRLSPPP-------EDSPMSPPPE 640
Query: 414 RQREAEAQQLPKPKRRRLSKL 434
E+ P P+ RLS L
Sbjct: 641 -----ESPMSPPPEVSRLSPL 656
Score = 41.2 bits (95), Expect = 0.002
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 23/121 (19%)
Query: 282 PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNLKEC 341
P PPTQ HS T N +L + PP + + PLAP P SP + L E
Sbjct: 4886 PEPPTQ-HSYTYNVSNL----DVRQLSAPPPEEPSPPPSPLAPSPASP----PTEPLVEL 4936
Query: 342 LFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPKRW 401
PL P+P PLP + P S + P +E E +PP+ K+W
Sbjct: 4937 PTEPLAEPPVPS------------PLPLASSPESARPKPRARP--PEEGEDSRPPRLKKW 4982
Query: 402 R 402
+
Sbjct: 4983 K 4983
Score = 38.9 bits (89), Expect = 0.010
Identities = 46/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%)
Query: 282 PPPPTQQHSITDNSLSLKTPPECLLT-------PLPPSVDDN-----IKECPLAPLPPSP 329
PPP S + L PPE T P P +D+ ++E PL PLP P
Sbjct: 673 PPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEP 732
Query: 330 --LPPSVDDNLKECLFVP-LPPSPLPPSVDDNLKECLFVPLPPSPL------PPSVDDNL 380
P S +L P L P P P + +E P P P P +
Sbjct: 733 QLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQA 792
Query: 381 KTPPLATQEAEVEKPPKPKRWRVDEVEQ----SPKPKRQ----REAEAQQLPKPKRRRLS 432
+ P L+ Q E+ P+ + + V + SP+P+ + E P+P+ LS
Sbjct: 793 EGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLS 852
Score = 36.6 bits (83), Expect = 0.048
Identities = 39/137 (28%), Positives = 48/137 (35%), Gaps = 27/137 (19%)
Query: 301 PPECLLTPLPPSVDDNIK---------ECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPL 351
PP L P PPS D + + PL P P P P S LPP L
Sbjct: 2353 PPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPPPPESC---------CALPPRSL 2403
Query: 352 PPSVDDNLKECLFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPK 411
P F +P SP S + TP + EA P P+ D + P
Sbjct: 2404 PSDP--------FSRVPASPQSQSSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPS 2455
Query: 412 PKRQREAEAQQLPKPKR 428
+ R+ A L KP R
Sbjct: 2456 RPQSRDPFA-PLHKPPR 2471
Score = 34.3 bits (77), Expect = 0.24
Identities = 34/130 (26%), Positives = 48/130 (36%), Gaps = 45/130 (34%)
Query: 282 PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPLAP----------LPPSPLP 331
PPP S +L P E L+PLP +E PL+P +PP PLP
Sbjct: 884 PPPGEPSLSPLLGEPALSEPGEPPLSPLP-------EELPLSPSGEPSLSPQLMPPDPLP 936
Query: 332 PSV--------------------------DDNLKECLFVPLPPSPLPPSVDDNLKECLFV 365
P + D + + L P+ +P+ P + N +
Sbjct: 937 PPLSPIITAAAPPALSPLGELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDP--E 994
Query: 366 PLPPSPLPPS 375
P+PP LPPS
Sbjct: 995 PVPPMILPPS 1004
Score = 32.7 bits (73), Expect = 0.69
Identities = 38/123 (30%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 305 LLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNL---KECLFVPLPP--SPL-------- 351
L TP+ P + N + P+PP LPPS + L PLPP SPL
Sbjct: 978 LETPISPPPEANCTDPE--PVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQ 1035
Query: 352 --PPSVDDNLKECLFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQS 409
PPS L VP P SP+ V + E E EK +P+ ++ S
Sbjct: 1036 NSPPSQCSPPALPLSVPSPLSPIGKVVG---VSDEAELHEMETEKVSEPECPALEPSATS 1092
Query: 410 PKP 412
P P
Sbjct: 1093 PLP 1095
Score = 30.0 bits (66), Expect = 4.4
Identities = 29/111 (26%), Positives = 39/111 (35%), Gaps = 20/111 (18%)
Query: 323 APLPPSPLPPSVDDNLKEC----LFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDD 378
+P P P S N+ L P P P PP PSPL PS
Sbjct: 4883 SPAPEPPTQHSYTYNVSNLDVRQLSAPPPEEPSPP---------------PSPLAPSPAS 4927
Query: 379 NLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPK-RQREAEAQQLPKPKR 428
P + + +PP P + +S +PK R R E + +P R
Sbjct: 4928 PPTEPLVELPTEPLAEPPVPSPLPLASSPESARPKPRARPPEEGEDSRPPR 4978
>gi|38505220 acyl-CoA synthetase medium-chain family member 5 [Homo
sapiens]
Length = 579
Score = 51.2 bits (121), Expect = 2e-06
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 17 QMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKV 58
++VK IVLTP + SHD T+ELQ+HVK VT P +Y RKV
Sbjct: 512 EVVKAFIVLTPAYSSHDPEALTRELQEHVKRVTAPYKYPRKV 553
>gi|42544132 SA hypertension-associated homolog isoform 1 [Homo
sapiens]
Length = 586
Score = 50.8 bits (120), Expect = 2e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 17 QMVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKV 58
++VK +VL P + SHDQ Q KE+Q+HVK T P +Y RKV
Sbjct: 518 EVVKAFVVLNPDYKSHDQEQLIKEIQEHVKKTTAPYKYPRKV 559
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 49.7 bits (117), Expect = 5e-06
Identities = 81/304 (26%), Positives = 127/304 (41%), Gaps = 64/304 (21%)
Query: 163 RVSSFRGNKIGLKDVITLRRHVETKVRAKIR---KRKVTTKINR---HDKINGKRKTARK 216
RVS+ + K++ + + + + R +I + T ++ R HD+ +RK+A
Sbjct: 615 RVSAKKSYLRNKKEICIAKHNEKIQQRTRIEDEYRTHHTVQLKREKLHDE--EERKSAWV 672
Query: 217 QKMFQRAQE-LRRRAEDYHKCKIPPSARKPLCNWVRMAAA----EHRHSSGLPYWLYL-- 269
+ QR + LR + Y I S R L + R AA + H LP L +
Sbjct: 673 SQERQRTLDRLRTFKQRYPGQVILKSTRLRLAHARRKGAASPVLQEDHCDSLPSVLQVEE 732
Query: 270 -TAETLKNRMGRQPPPPTQQHSIT---DNSLS----LKTPPECLLTPLPPSV-----DDN 316
T E + R+ R P T+ S+ D SL+ P + + LPP++ ++N
Sbjct: 733 KTEEVGEGRVKRGPSQTTEPQSLVQLEDTSLTQLEATSLPLSGVTSELPPTISLPLLNNN 792
Query: 317 IKECPLAPLP-PSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPS 375
++ C + P PSPLPP+ P PP P PP P PP PLP +
Sbjct: 793 LEPCSVTINPLPSPLPPT-----------PPPPPPPPP------------PPPPPPLPVA 829
Query: 376 VDDNLKT--PPLATQEAEVEKPPK----PKRWRVDEVE-QSPKPKRQREAEAQQLPKPKR 428
D +T L +E ++ PK P D + S + K ++ AE Q R
Sbjct: 830 KDSGPETLEKDLPRKEGNEKRIPKSASAPSAHLFDSSQLVSARKKLRKTAEGLQ-----R 884
Query: 429 RRLS 432
RR+S
Sbjct: 885 RRVS 888
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 48.5 bits (114), Expect = 1e-05
Identities = 43/139 (30%), Positives = 55/139 (39%), Gaps = 44/139 (31%)
Query: 282 PPPPTQQHSITDNSLS------------LKTPPECLLTPLPPSVDDNIKECPLAPLPPSP 329
PPPP ++ S T S + L PP+ L P PP + E P P PP
Sbjct: 518 PPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELP--PPPPDF 575
Query: 330 LPPSVDDNLKECLFVPLPP--------SPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLK 381
+ P D FVP PP S LPP P PP+P P V D+ +
Sbjct: 576 MEPPPD-------FVPPPPPSYAGIAGSELPPPP----------PPPPAPAPAPVPDSAR 618
Query: 382 TPPLATQEAEVEKPPKPKR 400
PP A ++PP P +
Sbjct: 619 PPP-----AVAKRPPVPPK 632
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 47.0 bits (110), Expect = 4e-05
Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 24/175 (13%)
Query: 256 EHRHSSGLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDD 315
EH L ++ L N + +QP P+ + + PP+ PP+V
Sbjct: 844 EHSTPPHLNQHAVVSPPALHNALPQQPSRPSNR--------AAALPPK---PARPPAVSP 892
Query: 316 NIKECPLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNL-KECLFVPLPPSPLPP 374
+ + PL P PP PP V +E PP+P S+ L + L PP+PL P
Sbjct: 893 ALTQTPLLPQPPMAQPPQVLLEDEE------PPAPPLTSMQMQLYLQQLQKVQPPTPLLP 946
Query: 375 SVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRR 429
SV + PP + PP P + + + P P Q + QQ +P R
Sbjct: 947 SVKVQSQPPP------PLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPR 995
Score = 43.5 bits (101), Expect = 4e-04
Identities = 44/168 (26%), Positives = 63/168 (37%), Gaps = 10/168 (5%)
Query: 281 QPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNLKE 340
QP PP Q T + TP + TP+ V + P P+PP P PP
Sbjct: 212 QPNPPPVQ--ATPHPFPAVTPDLIVQTPVMTVVPPQPLQTP-PPVPPQPQPPPAPAPQPV 268
Query: 341 CLFVPL---PPSPLPPSVDDNLKECLFVPLPPSPL--PPSVDDNLKTPPLATQEAEVEKP 395
P+ P P+ K P P+ PPS+ KT L Q E +P
Sbjct: 269 QSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLG-QRRESSRP 327
Query: 396 PKPKRWRVDEVEQSPKPKRQREAEAQQLPKPKRRRLSKLRTRHCTQAW 443
KP + V + +Q P P++ + ++QL +H AW
Sbjct: 328 VKPPKKDVPDSQQHPAPEKSSKV-SEQLKCCSGILKEMFAKKHAAYAW 374
Score = 36.6 bits (83), Expect = 0.048
Identities = 43/146 (29%), Positives = 52/146 (35%), Gaps = 25/146 (17%)
Query: 280 RQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNLK 339
+QPPPP QQ + PP P PPS+ AP S PP +
Sbjct: 755 QQPPPPPQQPPPPPPPQQQQQPPP---PPPPPSMPQQ-----AAPAMKSSPPPFIATQ-- 804
Query: 340 ECLFVPLPPSPLPPSVDDNLKECL--FVPLPPSPLPPSVDD--NLKTPPLATQEAEVEK- 394
VP+ LP SV D + + LP LPP + TPP Q A V
Sbjct: 805 ----VPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPP 860
Query: 395 ------PPKPKRWRVDEVEQSPKPKR 414
P +P R PKP R
Sbjct: 861 ALHNALPQQPSRPSNRAAALPPKPAR 886
Score = 35.4 bits (80), Expect = 0.11
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 27/140 (19%)
Query: 281 QPPPPTQQHSITDNSLSLKTPPECLLTPLP-PSVDDNIKECPLAPLPPSPLPPSVDDNLK 339
QPP P S+ +++ P L P P PSV +++ P P PP P PP +
Sbjct: 939 QPPTPLLP------SVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQP 992
Query: 340 ECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPK 399
PP P+ +L+ F P PP PP ++PP P+
Sbjct: 993 -------PPRPV------HLQPMQFSTHIQQPPPPQGQQPPHPPP-------GQQPPPPQ 1032
Query: 400 RWRVDEVEQSPKPKRQREAE 419
+ +V Q R +++
Sbjct: 1033 PAKPQQVIQHHHSPRHHKSD 1052
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 46.6 bits (109), Expect = 5e-05
Identities = 53/178 (29%), Positives = 67/178 (37%), Gaps = 42/178 (23%)
Query: 282 PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIK----ECPLAPLPPSPLPP----- 332
PPPP +S +KTP L++P P N+ P AP PP P PP
Sbjct: 180 PPPPPPLPPPLPSSSPIKTP---LVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPP 236
Query: 333 ----------SVDDNLKECLFVPLPPS--PLPPSVDDNLK--------ECLFVPLPPSPL 372
+V L P+PP LPP LK + P PP PL
Sbjct: 237 LPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPL 296
Query: 373 PP----SVDDNLKTPPLATQEAEVEKPPKPKRWRVDEVEQSPKPKRQREAEAQQLPKP 426
PP S +L PPL + E PP P + + P ++A AQ LP P
Sbjct: 297 PPYASCSPRASLPAPPLPGVNSSSETPP-PLPPKSPSFQAPP-----QKAGAQALPAP 348
Score = 37.4 bits (85), Expect = 0.028
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 282 PPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVDDNLKEC 341
PP + + ++ + +T P P PP P P PP PLPP + +
Sbjct: 146 PPASPRLGNTSEAHGAARTAPPRPNVPAPPP--------PTPPPPPPPLPPPLPSSSPIK 197
Query: 342 LFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKTPPLATQEAEVEKPPKPK 399
+ PP PL NL + P+P +P PP PPL +K KP+
Sbjct: 198 TPLVSPPGPL---TKGNL-PVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQ 251
Score = 29.3 bits (64), Expect = 7.6
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 36/106 (33%)
Query: 321 PLAPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNLKECLFVPLPPSPLPPSVDDNL 380
P+ P PP PLPP P PP PP P PPS
Sbjct: 2 PVPPPPPPPLPP------------PPPPLGAPP------------PPPPS---------- 27
Query: 381 KTPPLATQEAEVEK-PPKPKRWRVDEVEQSPKPKRQREAEAQQLPK 425
PP++T + + + PK + + +++Q + ++ + + P+
Sbjct: 28 -APPVSTDTSSLRRADPKGRSALLADIQQGTRLRKVTQINDRSAPQ 72
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,371,480
Number of Sequences: 37866
Number of extensions: 1278490
Number of successful extensions: 10311
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 499
Number of HSP's that attempted gapping in prelim test: 7008
Number of HSP's gapped (non-prelim): 2030
length of query: 449
length of database: 18,247,518
effective HSP length: 106
effective length of query: 343
effective length of database: 14,233,722
effective search space: 4882166646
effective search space used: 4882166646
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.