LOC642778 18398

Name: LOC642778	Sequence: fasta or formatted (317aa)		NCBI GI: 239745416
Description: PREDICTED: similar to GPS, PLAT and transmembrane domain-containing protein FLJ00285		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 18 2 C cysteine 2.5 8 1 D aspartate 3.5 11 1 E glutamate 5.7 18 2 F phenylalanine 4.1 13 2 G glycine 5.0 16 2 H histidine 4.7 15 2 I isoleucine 5.0 16 2 K lysine 8.2 26 1 L leucine 9.1 29 2 M methionine 2.5 8 1 N asparagine 3.2 10 1 P proline 4.4 14 2 Q glutamine 5.0 16 2 R arginine 9.5 30 3 S serine 6.6 21 1 T threonine 5.4 17 2 V valine 6.9 22 1 W tryptophan 0.6 2 1 Y tyrosine 2.2 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to GPS, PLAT and transmembrane d... LOC642799 1.000 PREDICTED: similar to GPS, PLAT and transmembrane d... LOC100288332 0.985 PREDICTED: hypothetical protein XP_002343465 NPIP 0.590 nuclear pore complex interacting protein LOC339047 0.585 hypothetical protein LOC339047 NPIPL2 0.483 PREDICTED: nuclear pore complex interacting protein... LOC729978 0.439 PREDICTED: NPIP-like protein 2 isoform 2 LOC729602 0.428 PREDICTED: NPIP-like protein ENSP00000283050 isofor... LOC728888 0.425 PREDICTED: similar to acyl-CoA synthetase medium-ch... LOC100132247 0.422 hypothetical protein LOC100132247 NPIPL3 0.422 nuclear pore complex interacting protein-like 3 [Ho... LOC729602 0.405 PREDICTED: hypothetical protein LOC283846 LOC730153 0.401 PREDICTED: similar to NPIP-like protein ENSP0000034... LOC728741 0.381 PREDICTED: hypothetical protein LOC728734 0.354 PREDICTED: similar to NPIP-like protein ENSP0000028... NPIPL1 0.352 PREDICTED: nuclear pore complex interacting protein... ACSM1 0.061 acyl-CoA synthetase medium-chain family member 1 [H... ACSM2A 0.050 acyl-CoA synthetase medium-chain family member 2A [H... LOC100291873 0.050 PREDICTED: similar to Acyl-coenzyme A synthetase AC... LOC100291873 0.050 PREDICTED: similar to Acyl-coenzyme A synthetase AC... ACSM2B 0.050 acyl-CoA synthetase medium-chain family member 2B [... ACSM2B 0.050 acyl-CoA synthetase medium-chain family member 2B [... ACSM5 0.042 acyl-CoA synthetase medium-chain family member 5 [Ho... ACSM3 0.040 SA hypertension-associated homolog isoform 1 ACSM4 0.023 acyl-CoA synthetase medium-chain family member 4 [H... MIA3 0.018 melanoma inhibitory activity family, member 3 [Homo... BOD1L 0.016 biorientation of chromosomes in cell division 1-like... CCDC34 0.016 coiled-coil domain containing 34 isoform 1 MINK1 0.016 misshapen/NIK-related kinase isoform 4 MINK1 0.016 misshapen/NIK-related kinase isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.