Search of human proteins with 239745440

Search of human proteins with 239745440

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745440 PREDICTED: hypothetical protein XP_002343467 [Homo
sapiens]
         (144 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745440 PREDICTED: hypothetical protein XP_002343467 [Homo ...   296   4e-81
gi|239745437 PREDICTED: hypothetical protein XP_002343466 [Homo ...   293   3e-80
gi|239745420 PREDICTED: hypothetical protein XP_002343461 [Homo ...   293   3e-80
gi|239756491 PREDICTED: hypothetical protein [Homo sapiens]           291   1e-79
gi|239745428 PREDICTED: hypothetical protein XP_002343462 [Homo ...   291   1e-79
gi|239756435 PREDICTED: hypothetical protein [Homo sapiens]           279   7e-76
gi|239750968 PREDICTED: hypothetical protein XP_002347619 [Homo ...   279   7e-76
gi|239745374 PREDICTED: hypothetical protein XP_002343449 [Homo ...   279   7e-76
gi|83367077 mucin 16 [Homo sapiens]                                    31   0.41 
gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens]                   30   0.70 
gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens]                    30   0.70 
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             30   0.91 
gi|222418633 family with sequence similarity 71, member B [Homo ...    29   1.2  
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo...    28   2.0  
gi|239755513 PREDICTED: hypothetical protein [Homo sapiens]            28   2.7  
gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]      28   2.7  
gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]      28   2.7  
gi|239750015 PREDICTED: hypothetical protein XP_002347237 [Homo ...    28   2.7  
gi|239744328 PREDICTED: hypothetical protein XP_002343098 [Homo ...    28   2.7  
gi|148539844 deleted in malignant brain tumors 1 isoform c precu...    28   2.7  
gi|148539842 deleted in malignant brain tumors 1 isoform b precu...    28   2.7  
gi|148539840 deleted in malignant brain tumors 1 isoform a precu...    28   2.7  
gi|239746556 PREDICTED: hypothetical protein XP_002343778 [Homo ...    28   3.5  
gi|88758613 CD93 antigen precursor [Homo sapiens]                      28   3.5  
gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]       28   3.5  
gi|55750053 atrophin-1 [Homo sapiens]                                  27   4.5  
gi|55750041 atrophin-1 [Homo sapiens]                                  27   4.5  
gi|239757317 PREDICTED: hypothetical protein [Homo sapiens]            27   5.9  
gi|169216359 PREDICTED: hypothetical protein [Homo sapiens]            27   5.9  
gi|169216600 PREDICTED: hypothetical protein [Homo sapiens]            27   5.9  

>gi|239745440 PREDICTED: hypothetical protein XP_002343467 [Homo
           sapiens]
          Length = 144

 Score =  296 bits (758), Expect = 4e-81
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
           MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239745437 PREDICTED: hypothetical protein XP_002343466 [Homo
           sapiens]
          Length = 144

 Score =  293 bits (751), Expect = 3e-80
 Identities = 143/144 (99%), Positives = 143/144 (99%)

Query: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
           MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVS CSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239745420 PREDICTED: hypothetical protein XP_002343461 [Homo
           sapiens]
          Length = 144

 Score =  293 bits (751), Expect = 3e-80
 Identities = 143/144 (99%), Positives = 143/144 (99%)

Query: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
           MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVS CSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239756491 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 144

 Score =  291 bits (746), Expect = 1e-79
 Identities = 142/144 (98%), Positives = 142/144 (98%)

Query: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
           MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSF TVTRASEYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFRTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVS CSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239745428 PREDICTED: hypothetical protein XP_002343462 [Homo
           sapiens]
          Length = 144

 Score =  291 bits (746), Expect = 1e-79
 Identities = 142/144 (98%), Positives = 142/144 (98%)

Query: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
           MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSF TVTRASEYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFRTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVS CSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239756435 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 144

 Score =  279 bits (713), Expect = 7e-76
 Identities = 137/144 (95%), Positives = 140/144 (97%)

Query: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
           MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVS CSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239750968 PREDICTED: hypothetical protein XP_002347619 [Homo
           sapiens]
          Length = 144

 Score =  279 bits (713), Expect = 7e-76
 Identities = 137/144 (95%), Positives = 140/144 (97%)

Query: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
           MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVS CSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239745374 PREDICTED: hypothetical protein XP_002343449 [Homo
           sapiens]
          Length = 144

 Score =  279 bits (713), Expect = 7e-76
 Identities = 137/144 (95%), Positives = 140/144 (97%)

Query: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60
           MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVS CSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 30.8 bits (68), Expect = 0.41
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 88  RDLRAEGGGEQVAVSGAPSHGLAHLLRATTA----APSWSCTTTARPTSK 133
           R+LR  G       S   +HG + +LRATT+    A SW+  +TA+  S+
Sbjct: 481 RELRTTGSTSGRQSSSTAAHGSSDILRATTSSTSKASSWTSESTAQQFSE 530


>gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens]
          Length = 296

 Score = 30.0 bits (66), Expect = 0.70
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 13/104 (12%)

Query: 29  GQNRAALTSFSTVTRASEYSMTCWGSACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMAR 88
           G + ++  S  +  RA E  +   G+      G T   S    T+SP   P G G     
Sbjct: 26  GASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLTGGGSGSGCTLSP---PQGCG----- 77

Query: 89  DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTS 132
                GGG  +A+S  PS G+  LL    AA S S ++++  +S
Sbjct: 78  -----GGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASS 116


>gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens]
          Length = 333

 Score = 30.0 bits (66), Expect = 0.70
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 13/104 (12%)

Query: 29  GQNRAALTSFSTVTRASEYSMTCWGSACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMAR 88
           G + ++  S  +  RA E  +   G+      G T   S    T+SP   P G G     
Sbjct: 26  GASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLTGGGSGSGCTLSP---PQGCG----- 77

Query: 89  DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTS 132
                GGG  +A+S  PS G+  LL    AA S S ++++  +S
Sbjct: 78  -----GGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASS 116


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 29.6 bits (65), Expect = 0.91
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 5/114 (4%)

Query: 30   QNRAALTSFSTVTRASEYSMTCWGSACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMARD 89
            Q  ++LTS    T +  + M     A  +SP      S  + T  PIA  + S       
Sbjct: 2231 QQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIATGVSSSASGPST 2290

Query: 90   LR----AEGGGEQVAVSGA-PSHGLAHLLRATTAAPSWSCTTTARPTSKCGLKP 138
                  +     Q+ V+   P+  L+     TT++ S   TTT+ P + C +KP
Sbjct: 2291 ANYNSFSSASMPQIPVASVTPTASLSGAGTYTTSSLSTKSTTTSDPPNICKVKP 2344


>gi|222418633 family with sequence similarity 71, member B [Homo
           sapiens]
          Length = 605

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 29  GQNRAALTSFSTVTRASEYSMTCWGSACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMAR 88
           G+N++A ++ +   +AS+ S      + R++PGS   V+   + V  +A  +    + A+
Sbjct: 516 GKNQSASSTGALQKKASKISSFL--RSLRATPGSKTRVTSHDREVDIVAKMVEKQNIEAK 573

Query: 89  DLRAEGGGEQVAVSG 103
             +A+GG E   +SG
Sbjct: 574 VEKAQGGQELEMISG 588


>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
           polymerase [Homo sapiens]
          Length = 1327

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 30/69 (43%), Positives = 35/69 (50%), Gaps = 10/69 (14%)

Query: 37  SFSTVTRASEYSMTCWGSACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGG 96
           S S  + +S  S T   S+  SSPGS+LA S  +  VS  A PLG G        A G G
Sbjct: 123 SGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTA-PLGPG--------AAGPG 173

Query: 97  EQV-AVSGA 104
             V AVSGA
Sbjct: 174 TGVPAVSGA 182


>gi|239755513 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 146

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 5/97 (5%)

Query: 53  GSACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMA---RDLRAEGGGEQVAVSGAPS--H 107
           GS C   P    A         P+   L  G+ ++   R  + E G  +      PS  H
Sbjct: 15  GSKCPFGPQKQKAGLERGSMQLPLLHHLVPGQALSPTSRRKKTERGNCEQMGFWVPSGLH 74

Query: 108 GLAHLLRATTAAPSWSCTTTARPTSKCGLKPGGSTAP 144
             + +L A T+AP+W     ARP    G KP    +P
Sbjct: 75  KPSVMLPACTSAPAWPPDIPARPGLGAGDKPREGPSP 111


>gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]
          Length = 1662

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSRCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 910  WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 969

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 970  HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1016


>gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]
          Length = 1788

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSRCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 1036 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1095

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 1096 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1142


>gi|239750015 PREDICTED: hypothetical protein XP_002347237 [Homo
           sapiens]
          Length = 146

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 5/97 (5%)

Query: 53  GSACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMA---RDLRAEGGGEQVAVSGAPS--H 107
           GS C   P    A         P+   L  G+ ++   R  + E G  +      PS  H
Sbjct: 15  GSKCPFGPQKQKAGLERGSMQLPLLHHLVPGQALSPTSRRKKTERGNCEQMGFWVPSGLH 74

Query: 108 GLAHLLRATTAAPSWSCTTTARPTSKCGLKPGGSTAP 144
             + +L A T+AP+W     ARP    G KP    +P
Sbjct: 75  KPSVMLPACTSAPAWPPDIPARPGLGAGDKPREGPSP 111


>gi|239744328 PREDICTED: hypothetical protein XP_002343098 [Homo
           sapiens]
          Length = 146

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 5/97 (5%)

Query: 53  GSACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMA---RDLRAEGGGEQVAVSGAPS--H 107
           GS C   P    A         P+   L  G+ ++   R  + E G  +      PS  H
Sbjct: 15  GSKCPFGPQKQKAGLERGSMQLPLLHHLVPGQALSPTSRRKKTERGNCEQMGFWVPSGLH 74

Query: 108 GLAHLLRATTAAPSWSCTTTARPTSKCGLKPGGSTAP 144
             + +L A T+AP+W     ARP    G KP    +P
Sbjct: 75  KPSVMLPACTSAPAWPPDIPARPGLGAGDKPREGPSP 111


>gi|148539844 deleted in malignant brain tumors 1 isoform c precursor
            [Homo sapiens]
          Length = 2403

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSRCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 1651 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1710

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 1711 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1757


>gi|148539842 deleted in malignant brain tumors 1 isoform b precursor
            [Homo sapiens]
          Length = 2413

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSRCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 1661 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1720

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 1721 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1767


>gi|148539840 deleted in malignant brain tumors 1 isoform a precursor
            [Homo sapiens]
          Length = 1785

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSRCSQTVSPIALPL--------GSGRVMARDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 1033 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1092

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 1093 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1139


>gi|239746556 PREDICTED: hypothetical protein XP_002343778 [Homo
           sapiens]
          Length = 169

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 58  SSPGSTLAVSRCSQTVSPIALPLGSG--RVMARDLRAEGGGEQVAVSGAPSHG 108
           S+ GS     R S   SP A   GSG  +   R L A+GG E +   G   HG
Sbjct: 99  SAAGSPSFCPRLSLHTSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHG 151


>gi|88758613 CD93 antigen precursor [Homo sapiens]
          Length = 652

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 56  CRSSPGSTLAVSRCSQTVSPIALPLGSGRVMARDL-RAEGGGEQVAVSGAPSHGLAHLLR 114
           C   PG  LA +  S T+ P++L   SG     D    EG     A + +P+ G     +
Sbjct: 452 CGCLPGWVLAPNGVSCTMGPVSLGPPSGPPDEEDKGEKEGSTVPRAATASPTRGPEGTPK 511

Query: 115 A--TTAAPSWSCTTTARPTSKCGLKPGGS 141
           A  TT+ PS S            L P GS
Sbjct: 512 ATPTTSRPSLSSDAPITSAPLKMLAPSGS 540


>gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]
          Length = 554

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)

Query: 129 RPTSKCGLKPGGSTA 143
           RP SKCG++PGG  A
Sbjct: 3   RPLSKCGMEPGGGDA 17


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 20/70 (28%), Positives = 27/70 (38%)

Query: 75  PIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTSKC 134
           P   P G+G V++       GG   +  G P+ G  H    T  + S S  + A PT   
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPP 276

Query: 135 GLKPGGSTAP 144
               GG   P
Sbjct: 277 TTPVGGGNLP 286


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 20/70 (28%), Positives = 27/70 (38%)

Query: 75  PIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTSKC 134
           P   P G+G V++       GG   +  G P+ G  H    T  + S S  + A PT   
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPP 276

Query: 135 GLKPGGSTAP 144
               GG   P
Sbjct: 277 TTPVGGGNLP 286


>gi|239757317 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 198

 Score = 26.9 bits (58), Expect = 5.9
 Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 82  SGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTAR--PTSKCGLKPG 139
           SG V  R +   GGGE     GA + G     R   AA     TT AR   TS     PG
Sbjct: 126 SGEVGLRPVGYPGGGESGTTCGAATAGTGPGGRGKVAAVGGPGTTWARGPRTSSPRAGPG 185

Query: 140 GST 142
            +T
Sbjct: 186 AAT 188


>gi|169216359 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 225

 Score = 26.9 bits (58), Expect = 5.9
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 55  ACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVA 100
           ACR    +   ++      SP  L    GR+ AR  RA+G GE VA
Sbjct: 179 ACRRGRSAAAGMAGAHGPRSPYLLRFSPGRMPAR--RAQGSGELVA 222


>gi|169216600 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 225

 Score = 26.9 bits (58), Expect = 5.9
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 55  ACRSSPGSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVA 100
           ACR    +   ++      SP  L    GR+ AR  RA+G GE VA
Sbjct: 179 ACRRGRSAAAGMAGAHGPRSPYLLRFSPGRMPAR--RAQGSGELVA 222


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.126    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,220,041
Number of Sequences: 37866
Number of extensions: 259096
Number of successful extensions: 840
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 814
Number of HSP's gapped (non-prelim): 44
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.