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Search of human proteins with 239745430
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo
sapiens]
(317 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo ... 644 0.0
gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane d... 635 0.0
gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane d... 635 0.0
gi|193290184 hypothetical protein LOC339047 [Homo sapiens] 395 e-110
gi|148596994 nuclear pore complex interacting protein [Homo sapi... 390 e-109
gi|239745607 PREDICTED: nuclear pore complex interacting protein... 324 7e-89
gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo sapi... 297 7e-81
gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isofor... 290 1e-78
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 288 4e-78
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 286 2e-77
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho... 286 2e-77
gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo sap... 276 2e-74
gi|239745494 PREDICTED: similar to NPIP-like protein ENSP0000034... 273 2e-73
gi|239745482 PREDICTED: hypothetical protein [Homo sapiens] 261 6e-70
gi|239745475 PREDICTED: similar to NPIP-like protein ENSP0000028... 244 1e-64
gi|239745469 PREDICTED: nuclear pore complex interacting protein... 243 1e-64
gi|115511026 acyl-CoA synthetase medium-chain family member 1 [H... 63 3e-10
gi|58082049 acyl-CoA synthetase medium-chain family member 2A [H... 56 4e-08
gi|239756507 PREDICTED: similar to Acyl-coenzyme A synthetase AC... 56 5e-08
gi|239756505 PREDICTED: similar to Acyl-coenzyme A synthetase AC... 56 5e-08
gi|157311624 acyl-CoA synthetase medium-chain family member 2B [... 56 5e-08
gi|157311622 acyl-CoA synthetase medium-chain family member 2B [... 56 5e-08
gi|38505220 acyl-CoA synthetase medium-chain family member 5 [Ho... 51 1e-06
gi|42544132 SA hypertension-associated homolog isoform 1 [Homo s... 50 3e-06
gi|122937307 acyl-CoA synthetase medium-chain family member 4 [H... 39 0.006
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap... 38 0.014
gi|13435145 clusterin associated protein 1 isoform 2 [Homo sapiens] 36 0.039
gi|52345626 clusterin associated protein 1 isoform 1 [Homo sapiens] 36 0.039
gi|122891870 melanoma inhibitory activity family, member 3 [Homo... 35 0.067
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 35 0.088
>gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo
sapiens]
Length = 317
Score = 644 bits (1660), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW
Sbjct: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
Query: 61 LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKI 120
LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKI
Sbjct: 61 LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKI 120
Query: 121 VLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180
VLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE
Sbjct: 121 VLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180
Query: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240
RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL
Sbjct: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240
Query: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300
AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP
Sbjct: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300
Query: 301 SNILSVRGSIFVIANGP 317
SNILSVRGSIFVIANGP
Sbjct: 301 SNILSVRGSIFVIANGP 317
>gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane
domain-containing protein FLJ00285 [Homo sapiens]
Length = 317
Score = 635 bits (1639), Expect = 0.0
Identities = 314/317 (99%), Positives = 315/317 (99%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW
Sbjct: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
Query: 61 LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKI 120
LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSN RRQEGIKI
Sbjct: 61 LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI 120
Query: 121 VLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180
VLEDIFTLWRQVETKVRAKI KMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE
Sbjct: 121 VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180
Query: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240
RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL
Sbjct: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240
Query: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300
AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP
Sbjct: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300
Query: 301 SNILSVRGSIFVIANGP 317
SNILSVRGS+FVIANGP
Sbjct: 301 SNILSVRGSVFVIANGP 317
>gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane
domain-containing protein FLJ00285 [Homo sapiens]
Length = 317
Score = 635 bits (1639), Expect = 0.0
Identities = 314/317 (99%), Positives = 315/317 (99%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW
Sbjct: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
Query: 61 LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKI 120
LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSN RRQEGIKI
Sbjct: 61 LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI 120
Query: 121 VLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180
VLEDIFTLWRQVETKVRAKI KMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE
Sbjct: 121 VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180
Query: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240
RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL
Sbjct: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240
Query: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300
AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP
Sbjct: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300
Query: 301 SNILSVRGSIFVIANGP 317
SNILSVRGS+FVIANGP
Sbjct: 301 SNILSVRGSVFVIANGP 317
>gi|193290184 hypothetical protein LOC339047 [Homo sapiens]
Length = 369
Score = 395 bits (1015), Expect = e-110
Identities = 194/196 (98%), Positives = 195/196 (99%)
Query: 41 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS
Sbjct: 22 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81
Query: 101 TDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 160
TDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK
Sbjct: 82 TDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 141
Query: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC
Sbjct: 142 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 201
Query: 221 KITPSARKPLCNRVSL 236
KITPSARKPLCNRV +
Sbjct: 202 KITPSARKPLCNRVRM 217
>gi|148596994 nuclear pore complex interacting protein [Homo
sapiens]
Length = 350
Score = 390 bits (1003), Expect = e-109
Identities = 193/196 (98%), Positives = 194/196 (98%)
Query: 41 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS
Sbjct: 22 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81
Query: 101 TDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 160
TDVQQRARRSN RRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK
Sbjct: 82 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 141
Query: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC
Sbjct: 142 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 201
Query: 221 KITPSARKPLCNRVSL 236
KITPSARKPLCNRV +
Sbjct: 202 KITPSARKPLCNRVRM 217
>gi|239745607 PREDICTED: nuclear pore complex interacting
protein-like 2 [Homo sapiens]
Length = 265
Score = 324 bits (830), Expect = 7e-89
Identities = 179/277 (64%), Positives = 195/277 (70%), Gaps = 54/277 (19%)
Query: 41 VINTLADHRHRGTDFG-------------GSPW-----LLIITVFLRSYKFAISLCTSYL 82
VIN+LA +RHR TDFG SP ++II FLR F I CTSYL
Sbjct: 23 VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82
Query: 83 CVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRK 142
CVSFLKTIF S+NGHDGSTDVQQRA RSN RQ+G KI L+D+ TL R VETKVRAKIRK
Sbjct: 83 CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRK 142
Query: 143 MKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYME 202
KVTTK+NRHDKINGKRKTA++ +
Sbjct: 143 RKVTTKINRHDKINGKRKTARKQ------------------------------------K 166
Query: 203 MFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFLAFGHSLPGQDMDTFFSLRLCAQ 262
MFQRAQ LRRRAEDY++CKI PSARKPLCN VSLLVFLAF HSLPGQDMDTFFSL+LCAQ
Sbjct: 167 MFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQ 226
Query: 263 ALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGP 299
ALQREMAERKAAY+HHSPIPVGNRV QKHLHPHPVGP
Sbjct: 227 ALQREMAERKAAYRHHSPIPVGNRVVQKHLHPHPVGP 263
>gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo
sapiens]
Length = 380
Score = 297 bits (761), Expect = 7e-81
Identities = 153/196 (78%), Positives = 167/196 (85%), Gaps = 2/196 (1%)
Query: 41 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
VINTLADH HRGTDFGGSPWL II F RSYK ++L T YL +SFLKTIF S+NGHD S
Sbjct: 22 VINTLADHHHRGTDFGGSPWLRIIIAFPRSYKVVLTLWTVYLWLSFLKTIFQSENGHDVS 81
Query: 101 TDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 160
TDVQQRARRSN RRQEG KI L+D+ TL R VETK RAKIRKMKVTTK+N HDKINGKRK
Sbjct: 82 TDVQQRARRSNRRRQEGNKIGLKDVITLRRHVETKGRAKIRKMKVTTKINHHDKINGKRK 141
Query: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
TAK+ +KLS+KE EH EKERQVSEAEENGKLDMKEIHTYM+MFQRAQ LRRRAEDY++C
Sbjct: 142 TAKK--QKLSVKECEHAEKERQVSEAEENGKLDMKEIHTYMKMFQRAQELRRRAEDYHKC 199
Query: 221 KITPSARKPLCNRVSL 236
KI PSARK LCN V +
Sbjct: 200 KIPPSARKALCNWVRM 215
>gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isoform 3
[Homo sapiens]
Length = 363
Score = 290 bits (742), Expect = 1e-78
Identities = 150/196 (76%), Positives = 160/196 (81%)
Query: 41 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
VINTLADH H GT F GSPWL I F RSYK I L T YL +S LKTI S+NGHDGS
Sbjct: 22 VINTLADHHHCGTGFRGSPWLHFIIAFPRSYKVFIILWTVYLWMSLLKTILWSRNGHDGS 81
Query: 101 TDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 160
TDVQQRA RSN RQEG KI L+D+ TLWR VETKVRAKIRK KVTTK+N HDKINGKRK
Sbjct: 82 TDVQQRAWRSNRCRQEGNKIGLKDVITLWRHVETKVRAKIRKRKVTTKINHHDKINGKRK 141
Query: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
TAK H+RKLSMKE EH EKERQVSEAEENGKLDMKEIHTY +MFQRAQ LRRRAEDY++
Sbjct: 142 TAKNHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHTYKKMFQRAQELRRRAEDYHKR 201
Query: 221 KITPSARKPLCNRVSL 236
KI PSARKPLCN V +
Sbjct: 202 KIPPSARKPLCNWVRM 217
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 288 bits (737), Expect = 4e-78
Identities = 160/253 (63%), Positives = 173/253 (68%), Gaps = 53/253 (20%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
MVKLSIVLTP+FLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADH HRGTDFGGSPW
Sbjct: 1 MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFGGSPW 60
Query: 61 LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGI-- 118
L II F SYK I+L YL VS LKTIF S+NGHDGSTDVQQRA RSN RRQEG+
Sbjct: 61 LHIIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRS 120
Query: 119 ---------------KIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAK 163
KI L+D+ TL R VETKVRAKIRK KVTTK+NRHDKINGKRKTA+
Sbjct: 121 ICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTAR 180
Query: 164 EHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKIT 223
+ +MFQRAQ LRRRAEDY++CKI
Sbjct: 181 K------------------------------------QKMFQRAQELRRRAEDYHKCKIP 204
Query: 224 PSARKPLCNRVSL 236
PSARK LCN V +
Sbjct: 205 PSARKALCNWVRM 217
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 286 bits (731), Expect = 2e-77
Identities = 158/253 (62%), Positives = 172/253 (67%), Gaps = 53/253 (20%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
MVKLSIVLTP+FLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADH HRGTDFGGSPW
Sbjct: 1 MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFGGSPW 60
Query: 61 LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGI-- 118
L +I F SYK I+L YL VS LKTIF S+NGHDGSTDVQQRA RSN RRQEG+
Sbjct: 61 LHVIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRS 120
Query: 119 ---------------KIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAK 163
KI L+D+ TL R VETKVRAKIRK KVTTK+N HDKINGKRKTA+
Sbjct: 121 ICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTAR 180
Query: 164 EHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKIT 223
+ +MFQRAQ LRRRAEDY++CKI
Sbjct: 181 K------------------------------------QKMFQRAQELRRRAEDYHKCKIP 204
Query: 224 PSARKPLCNRVSL 236
PSARK LCN V +
Sbjct: 205 PSARKALCNWVRM 217
>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
sapiens]
Length = 678
Score = 286 bits (731), Expect = 2e-77
Identities = 158/253 (62%), Positives = 172/253 (67%), Gaps = 53/253 (20%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
MVKLSIVLTP+FLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADH HRGTDFGGSPW
Sbjct: 1 MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFGGSPW 60
Query: 61 LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGI-- 118
L +I F SYK I+L YL VS LKTIF S+NGHDGSTDVQQRA RSN RRQEG+
Sbjct: 61 LHVIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRS 120
Query: 119 ---------------KIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAK 163
KI L+D+ TL R VETKVRAKIRK KVTTK+N HDKINGKRKTA+
Sbjct: 121 ICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTAR 180
Query: 164 EHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKIT 223
+ +MFQRAQ LRRRAEDY++CKI
Sbjct: 181 K------------------------------------QKMFQRAQELRRRAEDYHKCKIP 204
Query: 224 PSARKPLCNRVSL 236
PSARK LCN V +
Sbjct: 205 PSARKALCNWVRM 217
>gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo
sapiens]
Length = 224
Score = 276 bits (705), Expect = 2e-74
Identities = 154/257 (59%), Positives = 170/257 (66%), Gaps = 56/257 (21%)
Query: 60 WLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGI- 118
W+L +F +F C +C+S LKTI S+NGHDGSTDVQQRA RSN RQ+G+
Sbjct: 5 WMLFWLLFGLLLEFISHQC---ICMSLLKTILWSRNGHDGSTDVQQRAWRSNRCRQKGLR 61
Query: 119 ----------------KIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTA 162
KI L+D+ TLWR VETKVRAKIRK KVTTK+N HDKINGKRKTA
Sbjct: 62 SICMHTKKRVSSFPGNKIGLKDVITLWRHVETKVRAKIRKRKVTTKINHHDKINGKRKTA 121
Query: 163 KEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKI 222
K +MFQR Q L RRAEDY++ KI
Sbjct: 122 KNQ------------------------------------KMFQRVQELWRRAEDYHKRKI 145
Query: 223 TPSARKPLCNRVSLLVFLAFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIP 282
PSARKPLCN VSLLVFLAFGHSLPGQDMDTFFSL+LCAQALQREMAER+AAYK HSPIP
Sbjct: 146 PPSARKPLCNWVSLLVFLAFGHSLPGQDMDTFFSLQLCAQALQREMAERRAAYKPHSPIP 205
Query: 283 VGNRVAQKHLHPHPVGP 299
VGNRVAQKHLHPHPVGP
Sbjct: 206 VGNRVAQKHLHPHPVGP 222
>gi|239745494 PREDICTED: similar to NPIP-like protein
ENSP00000346774 [Homo sapiens]
Length = 221
Score = 273 bits (697), Expect = 2e-73
Identities = 149/233 (63%), Positives = 162/233 (69%), Gaps = 53/233 (22%)
Query: 84 VSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGI-----------------KIVLEDIF 126
VS LKTIF S+NGHDGSTDVQQRA RSN RQ+G+ KI L+D+
Sbjct: 23 VSLLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVI 82
Query: 127 TLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEA 186
TL R VETKVRAKIRK KVTTK+NRHDKINGKRKTA++
Sbjct: 83 TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ--------------------- 121
Query: 187 EENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFLAFGHSL 246
+MFQRAQ LRRRAEDY++CKI PSARK LCN VSL VFLAF HSL
Sbjct: 122 ---------------KMFQRAQELRRRAEDYHKCKIPPSARKALCNWVSLFVFLAFEHSL 166
Query: 247 PGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGP 299
PGQDMDTFFSL+LCAQALQREMAERKAAY+HHSPIPVGNRV QKHLHPHPVGP
Sbjct: 167 PGQDMDTFFSLQLCAQALQREMAERKAAYRHHSPIPVGNRVVQKHLHPHPVGP 219
>gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 261 bits (667), Expect = 6e-70
Identities = 154/271 (56%), Positives = 171/271 (63%), Gaps = 71/271 (26%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFG---- 56
MVKLSIVLTP+FLSHDQ Q TKELQQHVKSVTCPCEYLRKVIN+LA +RHR TDFG
Sbjct: 18 MVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVINSLAVYRHRETDFGVGVR 77
Query: 57 ---------GSP-----WLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTD 102
SP ++II FLR Y F I CTS LCVSFLKTIF S+NGHDGS D
Sbjct: 78 DHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVSFLKTIFWSRNGHDGSMD 137
Query: 103 VQQRARRSNCRRQEGI-----------------KIVLEDIFTLWRQVETKVRAKIRKMKV 145
VQQRA RSN RQ+G+ KI L+D+ TL R VETKVRAKIRK KV
Sbjct: 138 VQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 197
Query: 146 TTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQ 205
TTK+NRHDKINGKRKTA++ +MFQ
Sbjct: 198 TTKINRHDKINGKRKTARK------------------------------------QKMFQ 221
Query: 206 RAQALRRRAEDYYRCKITPSARKPLCNRVSL 236
RAQ LRRRAEDY++CKI PSARKPLCN V +
Sbjct: 222 RAQELRRRAEDYHKCKIPPSARKPLCNWVRM 252
>gi|239745475 PREDICTED: similar to NPIP-like protein
ENSP00000283050 isoform 1 [Homo sapiens]
Length = 385
Score = 244 bits (622), Expect = 1e-64
Identities = 123/155 (79%), Positives = 136/155 (87%)
Query: 82 LCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIR 141
+ VSFLKTIF S+NGHDGS DVQQRA RSN RQ+G KI L+D+ TL R VETKVRAKIR
Sbjct: 34 ISVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIR 93
Query: 142 KMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYM 201
K KVTTK+NRHDKINGKRKTA++H+RKLSMKE EH EKERQVSEAEENGKLDMKEIHTY
Sbjct: 94 KRKVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHTYK 153
Query: 202 EMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSL 236
+MFQRAQ LRRRAEDY++CKI PSARKPLCN V +
Sbjct: 154 KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRM 188
>gi|239745469 PREDICTED: nuclear pore complex interacting
protein-like 1 [Homo sapiens]
Length = 371
Score = 243 bits (621), Expect = 1e-64
Identities = 123/153 (80%), Positives = 135/153 (88%)
Query: 84 VSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKM 143
VSFLKTIF S+NGHDGS DVQQRA RSN RQ+G KI L+D+ TL R VETKVRAKIRK
Sbjct: 22 VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKR 81
Query: 144 KVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEM 203
KVTTK+NRHDKINGKRKTA++H+RKLSMKE EH EKERQVSEAEENGKLDMKEIHTY +M
Sbjct: 82 KVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHTYKKM 141
Query: 204 FQRAQALRRRAEDYYRCKITPSARKPLCNRVSL 236
FQRAQ LRRRAEDY++CKI PSARKPLCN V +
Sbjct: 142 FQRAQELRRRAEDYHKCKIPPSARKPLCNWVRM 174
>gi|115511026 acyl-CoA synthetase medium-chain family member 1 [Homo
sapiens]
Length = 577
Score = 63.2 bits (152), Expect = 3e-10
Identities = 31/41 (75%), Positives = 35/41 (85%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
+VK IVLTP+FLSHD+ QLTKELQQHVKSVT P +Y RKV
Sbjct: 510 VVKAFIVLTPQFLSHDKDQLTKELQQHVKSVTAPYKYPRKV 550
>gi|58082049 acyl-CoA synthetase medium-chain family member 2A [Homo
sapiens]
Length = 577
Score = 56.2 bits (134), Expect = 4e-08
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
+VK +VL +FLSHD QLTKELQQHVKSVT P +Y RK+
Sbjct: 504 VVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 544
>gi|239756507 PREDICTED: similar to Acyl-coenzyme A synthetase
ACSM2B, mitochondrial isoform 2 [Homo sapiens]
Length = 571
Score = 55.8 bits (133), Expect = 5e-08
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
+VK ++L +FLSHD QLTKELQQHVKSVT P +Y RK+
Sbjct: 498 VVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 538
>gi|239756505 PREDICTED: similar to Acyl-coenzyme A synthetase
ACSM2B, mitochondrial isoform 1 [Homo sapiens]
Length = 571
Score = 55.8 bits (133), Expect = 5e-08
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
+VK ++L +FLSHD QLTKELQQHVKSVT P +Y RK+
Sbjct: 498 VVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 538
>gi|157311624 acyl-CoA synthetase medium-chain family member 2B
[Homo sapiens]
Length = 577
Score = 55.8 bits (133), Expect = 5e-08
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
+VK ++L +FLSHD QLTKELQQHVKSVT P +Y RK+
Sbjct: 504 VVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 544
>gi|157311622 acyl-CoA synthetase medium-chain family member 2B
[Homo sapiens]
Length = 577
Score = 55.8 bits (133), Expect = 5e-08
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
+VK ++L +FLSHD QLTKELQQHVKSVT P +Y RK+
Sbjct: 504 VVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 544
>gi|38505220 acyl-CoA synthetase medium-chain family member 5 [Homo
sapiens]
Length = 579
Score = 51.2 bits (121), Expect = 1e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
+VK IVLTP + SHD LT+ELQ+HVK VT P +Y RKV
Sbjct: 513 VVKAFIVLTPAYSSHDPEALTRELQEHVKRVTAPYKYPRKV 553
>gi|42544132 SA hypertension-associated homolog isoform 1 [Homo
sapiens]
Length = 586
Score = 50.1 bits (118), Expect = 3e-06
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
+VK +VL P + SHDQ QL KE+Q+HVK T P +Y RKV
Sbjct: 519 VVKAFVVLNPDYKSHDQEQLIKEIQEHVKKTTAPYKYPRKV 559
>gi|122937307 acyl-CoA synthetase medium-chain family member 4 [Homo
sapiens]
Length = 580
Score = 38.9 bits (89), Expect = 0.006
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 1 MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
+VK +VL F S++ +LT ELQ HVK T P +Y RKV
Sbjct: 513 VVKAFVVLAAPFKSYNPEKLTLELQDHVKKSTAPYKYPRKV 553
>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
sapiens]
Length = 373
Score = 37.7 bits (86), Expect = 0.014
Identities = 23/114 (20%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 104 QQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAK 163
QQ +R +E KI+ E+ W Q + + + K R+ K+ N+ + ++ K
Sbjct: 170 QQLEKRKEMEEREKRKIIAEEKHKEWVQKKNEQKRKEREQKI----NKEMEEKAAKELEK 225
Query: 164 EHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDY 217
E+L++ + ++ + K++ E E K KE E+ ++ + ++ +++
Sbjct: 226 EYLQEKAKEKYQEWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKFQEW 279
>gi|13435145 clusterin associated protein 1 isoform 2 [Homo sapiens]
Length = 247
Score = 36.2 bits (82), Expect = 0.039
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Query: 133 ETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKL 192
E + AKI K K+ + NR KR + +R M E E E+E Q
Sbjct: 44 EANLEAKIEKRKLELERNR------KRLETLQSVRPCFMDEYEKTEEELQ---------- 87
Query: 193 DMKEIHTYMEMFQRAQALRRRAEDYYR 219
K+ TY+E FQ L ++ ED++R
Sbjct: 88 --KQYDTYLEKFQNLTYLEQQLEDHHR 112
>gi|52345626 clusterin associated protein 1 isoform 1 [Homo sapiens]
Length = 413
Score = 36.2 bits (82), Expect = 0.039
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Query: 133 ETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKL 192
E + AKI K K+ + NR KR + +R M E E E+E Q
Sbjct: 210 EANLEAKIEKRKLELERNR------KRLETLQSVRPCFMDEYEKTEEELQ---------- 253
Query: 193 DMKEIHTYMEMFQRAQALRRRAEDYYR 219
K+ TY+E FQ L ++ ED++R
Sbjct: 254 --KQYDTYLEKFQNLTYLEQQLEDHHR 278
>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
sapiens]
Length = 1907
Score = 35.4 bits (80), Expect = 0.067
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 37/217 (17%)
Query: 37 YLRK-VINTLADHRHRGTDFGGSPWL-LIITVFLRSYKFAISLCTSYLCV---------- 84
YL K ++ TL D G DF G PW + IT FL FAI L + L V
Sbjct: 1155 YLTKSLVATLPDDVQPGPDFYGLPWKPVFITAFLGIASFAIFLWRTVLVVKDRVYQVTEQ 1214
Query: 85 ---SFLKTIFP------------SQNGHDGSTDVQQRARRSNCRRQEGIKIVLEDIFTLW 129
LKTI Q + VQ+ +++ E IK + I TL
Sbjct: 1215 QISEKLKTIMKENTELVQKLSNYEQKIKESKKHVQETRKQNMILSDEAIK-YKDKIKTLE 1273
Query: 130 RQVE--TKVRAKIRKMKVTTK---VNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVS 184
+ E +R M + + V D I+ +K+ ++ +SM E E + ++
Sbjct: 1274 KNQEILDDTAKNLRVMLESEREQNVKNQDLISENKKSIEKLKDVISMNASEFSEVQIALN 1333
Query: 185 EAEENGKLDMKEIHTYME----MFQRAQALRRRAEDY 217
EA+ + + E H E + ++ + L++ ED+
Sbjct: 1334 EAKLSEEKVKSECHRVQEENARLKKKKEQLQQEIEDW 1370
Score = 32.3 bits (72), Expect = 0.57
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 167 RKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSA 226
+KLS +E E E+E ++S A+E +E+ TY + + ++ E ++ +I
Sbjct: 1536 KKLSQEEYERQEREHRLSAADEKAVSAAEEVKTYKRRIEEMEDELQKTERSFKNQIATHE 1595
Query: 227 RK 228
+K
Sbjct: 1596 KK 1597
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 35.0 bits (79), Expect = 0.088
Identities = 21/101 (20%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 130 RQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEEN 189
R+VE + R + + K+ K + ++ + +E R+ + +E+E+ K+ + E
Sbjct: 406 RRVEEQQRREREQRKLQEKEQQR-RLEDMQALRREEERRQAEREQEYKRKQLEEQRQSER 464
Query: 190 GKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPL 230
+ +++ H Y++ Q+ Q +++ + + ++ P RKPL
Sbjct: 465 LQRQLQQEHAYLKSLQQQQQ-QQQLQKQQQQQLLPGDRKPL 504
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,097,860
Number of Sequences: 37866
Number of extensions: 530722
Number of successful extensions: 2691
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 2436
Number of HSP's gapped (non-prelim): 277
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.