Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239745418

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane
domain-containing protein FLJ00285 [Homo sapiens]
         (317 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane d...   644   0.0  
gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane d...   644   0.0  
gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo ...   635   0.0  
gi|148596994 nuclear pore complex interacting protein [Homo sapi...   390   e-109
gi|193290184 hypothetical protein LOC339047 [Homo sapiens]            387   e-108
gi|239745607 PREDICTED: nuclear pore complex interacting protein...   324   7e-89
gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo sapi...   297   7e-81
gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isofor...   290   1e-78
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch...   288   4e-78
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]         286   2e-77
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho...   286   2e-77
gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo sap...   276   2e-74
gi|239745494 PREDICTED: similar to NPIP-like protein ENSP0000034...   273   2e-73
gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]           261   6e-70
gi|239745475 PREDICTED: similar to NPIP-like protein ENSP0000028...   244   1e-64
gi|239745469 PREDICTED: nuclear pore complex interacting protein...   243   1e-64
gi|115511026 acyl-CoA synthetase medium-chain family member 1 [H...    63   3e-10
gi|58082049 acyl-CoA synthetase medium-chain family member 2A [H...    56   4e-08
gi|239756507 PREDICTED: similar to Acyl-coenzyme A synthetase AC...    56   5e-08
gi|239756505 PREDICTED: similar to Acyl-coenzyme A synthetase AC...    56   5e-08
gi|157311624 acyl-CoA synthetase medium-chain family member 2B [...    56   5e-08
gi|157311622 acyl-CoA synthetase medium-chain family member 2B [...    56   5e-08
gi|38505220 acyl-CoA synthetase medium-chain family member 5 [Ho...    51   1e-06
gi|42544132 SA hypertension-associated homolog isoform 1 [Homo s...    50   3e-06
gi|122937307 acyl-CoA synthetase medium-chain family member 4 [H...    39   0.006
gi|122891870 melanoma inhibitory activity family, member 3 [Homo...    36   0.051
gi|87299628 biorientation of chromosomes in cell division 1-like...    35   0.088
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap...    35   0.088
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]      35   0.11 
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]      35   0.11 

>gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane
           domain-containing protein FLJ00285 [Homo sapiens]
          Length = 317

 Score =  644 bits (1660), Expect = 0.0
 Identities = 317/317 (100%), Positives = 317/317 (100%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
           MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW
Sbjct: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60

Query: 61  LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI 120
           LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI
Sbjct: 61  LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI 120

Query: 121 VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180
           VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE
Sbjct: 121 VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180

Query: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240
           RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL
Sbjct: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240

Query: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300
           AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP
Sbjct: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300

Query: 301 SNILSVRGSVFVIANGP 317
           SNILSVRGSVFVIANGP
Sbjct: 301 SNILSVRGSVFVIANGP 317


>gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane
           domain-containing protein FLJ00285 [Homo sapiens]
          Length = 317

 Score =  644 bits (1660), Expect = 0.0
 Identities = 317/317 (100%), Positives = 317/317 (100%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
           MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW
Sbjct: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60

Query: 61  LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI 120
           LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI
Sbjct: 61  LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI 120

Query: 121 VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180
           VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE
Sbjct: 121 VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180

Query: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240
           RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL
Sbjct: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240

Query: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300
           AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP
Sbjct: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300

Query: 301 SNILSVRGSVFVIANGP 317
           SNILSVRGSVFVIANGP
Sbjct: 301 SNILSVRGSVFVIANGP 317


>gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo
           sapiens]
          Length = 317

 Score =  635 bits (1639), Expect = 0.0
 Identities = 314/317 (99%), Positives = 315/317 (99%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
           MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW
Sbjct: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60

Query: 61  LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKI 120
           LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSN RRQEGIKI
Sbjct: 61  LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKI 120

Query: 121 VLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180
           VLEDIFTLWRQVETKVRAKI KMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE
Sbjct: 121 VLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKE 180

Query: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240
           RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL
Sbjct: 181 RQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFL 240

Query: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300
           AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP
Sbjct: 241 AFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGPP 300

Query: 301 SNILSVRGSVFVIANGP 317
           SNILSVRGS+FVIANGP
Sbjct: 301 SNILSVRGSIFVIANGP 317


>gi|148596994 nuclear pore complex interacting protein [Homo
           sapiens]
          Length = 350

 Score =  390 bits (1003), Expect = e-109
 Identities = 193/196 (98%), Positives = 194/196 (98%)

Query: 41  VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
           VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS
Sbjct: 22  VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81

Query: 101 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRK 160
           TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKI KMKVTTKVNRHDKINGKRK
Sbjct: 82  TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 141

Query: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
           TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC
Sbjct: 142 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 201

Query: 221 KITPSARKPLCNRVSL 236
           KITPSARKPLCNRV +
Sbjct: 202 KITPSARKPLCNRVRM 217


>gi|193290184 hypothetical protein LOC339047 [Homo sapiens]
          Length = 369

 Score =  387 bits (995), Expect = e-108
 Identities = 192/196 (97%), Positives = 193/196 (98%)

Query: 41  VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
           VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS
Sbjct: 22  VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81

Query: 101 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRK 160
           TDVQQRARRSN RRQEGIKIVLEDIFTLWRQVETKVRAKI KMKVTTKVNRHDKINGKRK
Sbjct: 82  TDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 141

Query: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
           TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC
Sbjct: 142 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 201

Query: 221 KITPSARKPLCNRVSL 236
           KITPSARKPLCNRV +
Sbjct: 202 KITPSARKPLCNRVRM 217


>gi|239745607 PREDICTED: nuclear pore complex interacting
           protein-like 2 [Homo sapiens]
          Length = 265

 Score =  324 bits (830), Expect = 7e-89
 Identities = 179/277 (64%), Positives = 195/277 (70%), Gaps = 54/277 (19%)

Query: 41  VINTLADHRHRGTDFG-------------GSPW-----LLIITVFLRSYKFAISLCTSYL 82
           VIN+LA +RHR TDFG              SP      ++II  FLR   F I  CTSYL
Sbjct: 23  VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82

Query: 83  CVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICK 142
           CVSFLKTIF S+NGHDGSTDVQQRA RSNR RQ+G KI L+D+ TL R VETKVRAKI K
Sbjct: 83  CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRK 142

Query: 143 MKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYME 202
            KVTTK+NRHDKINGKRKTA++                                     +
Sbjct: 143 RKVTTKINRHDKINGKRKTARKQ------------------------------------K 166

Query: 203 MFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFLAFGHSLPGQDMDTFFSLRLCAQ 262
           MFQRAQ LRRRAEDY++CKI PSARKPLCN VSLLVFLAF HSLPGQDMDTFFSL+LCAQ
Sbjct: 167 MFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQ 226

Query: 263 ALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGP 299
           ALQREMAERKAAY+HHSPIPVGNRV QKHLHPHPVGP
Sbjct: 227 ALQREMAERKAAYRHHSPIPVGNRVVQKHLHPHPVGP 263


>gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo
           sapiens]
          Length = 380

 Score =  297 bits (761), Expect = 7e-81
 Identities = 153/196 (78%), Positives = 167/196 (85%), Gaps = 2/196 (1%)

Query: 41  VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
           VINTLADH HRGTDFGGSPWL II  F RSYK  ++L T YL +SFLKTIF S+NGHD S
Sbjct: 22  VINTLADHHHRGTDFGGSPWLRIIIAFPRSYKVVLTLWTVYLWLSFLKTIFQSENGHDVS 81

Query: 101 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRK 160
           TDVQQRARRSNRRRQEG KI L+D+ TL R VETK RAKI KMKVTTK+N HDKINGKRK
Sbjct: 82  TDVQQRARRSNRRRQEGNKIGLKDVITLRRHVETKGRAKIRKMKVTTKINHHDKINGKRK 141

Query: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
           TAK+  +KLS+KE EH EKERQVSEAEENGKLDMKEIHTYM+MFQRAQ LRRRAEDY++C
Sbjct: 142 TAKK--QKLSVKECEHAEKERQVSEAEENGKLDMKEIHTYMKMFQRAQELRRRAEDYHKC 199

Query: 221 KITPSARKPLCNRVSL 236
           KI PSARK LCN V +
Sbjct: 200 KIPPSARKALCNWVRM 215


>gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isoform 3
           [Homo sapiens]
          Length = 363

 Score =  290 bits (742), Expect = 1e-78
 Identities = 150/196 (76%), Positives = 160/196 (81%)

Query: 41  VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
           VINTLADH H GT F GSPWL  I  F RSYK  I L T YL +S LKTI  S+NGHDGS
Sbjct: 22  VINTLADHHHCGTGFRGSPWLHFIIAFPRSYKVFIILWTVYLWMSLLKTILWSRNGHDGS 81

Query: 101 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRK 160
           TDVQQRA RSNR RQEG KI L+D+ TLWR VETKVRAKI K KVTTK+N HDKINGKRK
Sbjct: 82  TDVQQRAWRSNRCRQEGNKIGLKDVITLWRHVETKVRAKIRKRKVTTKINHHDKINGKRK 141

Query: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
           TAK H+RKLSMKE EH EKERQVSEAEENGKLDMKEIHTY +MFQRAQ LRRRAEDY++ 
Sbjct: 142 TAKNHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHTYKKMFQRAQELRRRAEDYHKR 201

Query: 221 KITPSARKPLCNRVSL 236
           KI PSARKPLCN V +
Sbjct: 202 KIPPSARKPLCNWVRM 217


>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
           family member 2 [Homo sapiens]
          Length = 1122

 Score =  288 bits (737), Expect = 4e-78
 Identities = 160/253 (63%), Positives = 173/253 (68%), Gaps = 53/253 (20%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
           MVKLSIVLTP+FLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADH HRGTDFGGSPW
Sbjct: 1   MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFGGSPW 60

Query: 61  LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGI-- 118
           L II  F  SYK  I+L   YL VS LKTIF S+NGHDGSTDVQQRA RSNRRRQEG+  
Sbjct: 61  LHIIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRS 120

Query: 119 ---------------KIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAK 163
                          KI L+D+ TL R VETKVRAKI K KVTTK+NRHDKINGKRKTA+
Sbjct: 121 ICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTAR 180

Query: 164 EHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKIT 223
           +                                     +MFQRAQ LRRRAEDY++CKI 
Sbjct: 181 K------------------------------------QKMFQRAQELRRRAEDYHKCKIP 204

Query: 224 PSARKPLCNRVSL 236
           PSARK LCN V +
Sbjct: 205 PSARKALCNWVRM 217


>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
          Length = 1133

 Score =  286 bits (731), Expect = 2e-77
 Identities = 158/253 (62%), Positives = 172/253 (67%), Gaps = 53/253 (20%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
           MVKLSIVLTP+FLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADH HRGTDFGGSPW
Sbjct: 1   MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFGGSPW 60

Query: 61  LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGI-- 118
           L +I  F  SYK  I+L   YL VS LKTIF S+NGHDGSTDVQQRA RSNRRRQEG+  
Sbjct: 61  LHVIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRS 120

Query: 119 ---------------KIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAK 163
                          KI L+D+ TL R VETKVRAKI K KVTTK+N HDKINGKRKTA+
Sbjct: 121 ICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTAR 180

Query: 164 EHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKIT 223
           +                                     +MFQRAQ LRRRAEDY++CKI 
Sbjct: 181 K------------------------------------QKMFQRAQELRRRAEDYHKCKIP 204

Query: 224 PSARKPLCNRVSL 236
           PSARK LCN V +
Sbjct: 205 PSARKALCNWVRM 217


>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
           sapiens]
          Length = 678

 Score =  286 bits (731), Expect = 2e-77
 Identities = 158/253 (62%), Positives = 172/253 (67%), Gaps = 53/253 (20%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFGGSPW 60
           MVKLSIVLTP+FLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADH HRGTDFGGSPW
Sbjct: 1   MVKLSIVLTPQFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHHHRGTDFGGSPW 60

Query: 61  LLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGI-- 118
           L +I  F  SYK  I+L   YL VS LKTIF S+NGHDGSTDVQQRA RSNRRRQEG+  
Sbjct: 61  LHVIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRS 120

Query: 119 ---------------KIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAK 163
                          KI L+D+ TL R VETKVRAKI K KVTTK+N HDKINGKRKTA+
Sbjct: 121 ICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTAR 180

Query: 164 EHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKIT 223
           +                                     +MFQRAQ LRRRAEDY++CKI 
Sbjct: 181 K------------------------------------QKMFQRAQELRRRAEDYHKCKIP 204

Query: 224 PSARKPLCNRVSL 236
           PSARK LCN V +
Sbjct: 205 PSARKALCNWVRM 217


>gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo
           sapiens]
          Length = 224

 Score =  276 bits (705), Expect = 2e-74
 Identities = 154/257 (59%), Positives = 170/257 (66%), Gaps = 56/257 (21%)

Query: 60  WLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGI- 118
           W+L   +F    +F    C   +C+S LKTI  S+NGHDGSTDVQQRA RSNR RQ+G+ 
Sbjct: 5   WMLFWLLFGLLLEFISHQC---ICMSLLKTILWSRNGHDGSTDVQQRAWRSNRCRQKGLR 61

Query: 119 ----------------KIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTA 162
                           KI L+D+ TLWR VETKVRAKI K KVTTK+N HDKINGKRKTA
Sbjct: 62  SICMHTKKRVSSFPGNKIGLKDVITLWRHVETKVRAKIRKRKVTTKINHHDKINGKRKTA 121

Query: 163 KEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKI 222
           K                                      +MFQR Q L RRAEDY++ KI
Sbjct: 122 KNQ------------------------------------KMFQRVQELWRRAEDYHKRKI 145

Query: 223 TPSARKPLCNRVSLLVFLAFGHSLPGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIP 282
            PSARKPLCN VSLLVFLAFGHSLPGQDMDTFFSL+LCAQALQREMAER+AAYK HSPIP
Sbjct: 146 PPSARKPLCNWVSLLVFLAFGHSLPGQDMDTFFSLQLCAQALQREMAERRAAYKPHSPIP 205

Query: 283 VGNRVAQKHLHPHPVGP 299
           VGNRVAQKHLHPHPVGP
Sbjct: 206 VGNRVAQKHLHPHPVGP 222


>gi|239745494 PREDICTED: similar to NPIP-like protein
           ENSP00000346774 [Homo sapiens]
          Length = 221

 Score =  273 bits (697), Expect = 2e-73
 Identities = 149/233 (63%), Positives = 162/233 (69%), Gaps = 53/233 (22%)

Query: 84  VSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGI-----------------KIVLEDIF 126
           VS LKTIF S+NGHDGSTDVQQRA RSNR RQ+G+                 KI L+D+ 
Sbjct: 23  VSLLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVI 82

Query: 127 TLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEA 186
           TL R VETKVRAKI K KVTTK+NRHDKINGKRKTA++                      
Sbjct: 83  TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ--------------------- 121

Query: 187 EENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFLAFGHSL 246
                          +MFQRAQ LRRRAEDY++CKI PSARK LCN VSL VFLAF HSL
Sbjct: 122 ---------------KMFQRAQELRRRAEDYHKCKIPPSARKALCNWVSLFVFLAFEHSL 166

Query: 247 PGQDMDTFFSLRLCAQALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGP 299
           PGQDMDTFFSL+LCAQALQREMAERKAAY+HHSPIPVGNRV QKHLHPHPVGP
Sbjct: 167 PGQDMDTFFSLQLCAQALQREMAERKAAYRHHSPIPVGNRVVQKHLHPHPVGP 219


>gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 449

 Score =  261 bits (667), Expect = 6e-70
 Identities = 154/271 (56%), Positives = 171/271 (63%), Gaps = 71/271 (26%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKVINTLADHRHRGTDFG---- 56
           MVKLSIVLTP+FLSHDQ Q TKELQQHVKSVTCPCEYLRKVIN+LA +RHR TDFG    
Sbjct: 18  MVKLSIVLTPQFLSHDQSQFTKELQQHVKSVTCPCEYLRKVINSLAVYRHRETDFGVGVR 77

Query: 57  ---------GSP-----WLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTD 102
                     SP      ++II  FLR Y F I  CTS LCVSFLKTIF S+NGHDGS D
Sbjct: 78  DHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCLCVSFLKTIFWSRNGHDGSMD 137

Query: 103 VQQRARRSNRRRQEGI-----------------KIVLEDIFTLWRQVETKVRAKICKMKV 145
           VQQRA RSNR RQ+G+                 KI L+D+ TL R VETKVRAKI K KV
Sbjct: 138 VQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKV 197

Query: 146 TTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQ 205
           TTK+NRHDKINGKRKTA++                                     +MFQ
Sbjct: 198 TTKINRHDKINGKRKTARK------------------------------------QKMFQ 221

Query: 206 RAQALRRRAEDYYRCKITPSARKPLCNRVSL 236
           RAQ LRRRAEDY++CKI PSARKPLCN V +
Sbjct: 222 RAQELRRRAEDYHKCKIPPSARKPLCNWVRM 252


>gi|239745475 PREDICTED: similar to NPIP-like protein
           ENSP00000283050 isoform 1 [Homo sapiens]
          Length = 385

 Score =  244 bits (622), Expect = 1e-64
 Identities = 123/155 (79%), Positives = 136/155 (87%)

Query: 82  LCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIC 141
           + VSFLKTIF S+NGHDGS DVQQRA RSNR RQ+G KI L+D+ TL R VETKVRAKI 
Sbjct: 34  ISVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIR 93

Query: 142 KMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYM 201
           K KVTTK+NRHDKINGKRKTA++H+RKLSMKE EH EKERQVSEAEENGKLDMKEIHTY 
Sbjct: 94  KRKVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHTYK 153

Query: 202 EMFQRAQALRRRAEDYYRCKITPSARKPLCNRVSL 236
           +MFQRAQ LRRRAEDY++CKI PSARKPLCN V +
Sbjct: 154 KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRM 188


>gi|239745469 PREDICTED: nuclear pore complex interacting
           protein-like 1 [Homo sapiens]
          Length = 371

 Score =  243 bits (621), Expect = 1e-64
 Identities = 123/153 (80%), Positives = 135/153 (88%)

Query: 84  VSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKM 143
           VSFLKTIF S+NGHDGS DVQQRA RSNR RQ+G KI L+D+ TL R VETKVRAKI K 
Sbjct: 22  VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKR 81

Query: 144 KVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEM 203
           KVTTK+NRHDKINGKRKTA++H+RKLSMKE EH EKERQVSEAEENGKLDMKEIHTY +M
Sbjct: 82  KVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHTYKKM 141

Query: 204 FQRAQALRRRAEDYYRCKITPSARKPLCNRVSL 236
           FQRAQ LRRRAEDY++CKI PSARKPLCN V +
Sbjct: 142 FQRAQELRRRAEDYHKCKIPPSARKPLCNWVRM 174


>gi|115511026 acyl-CoA synthetase medium-chain family member 1 [Homo
           sapiens]
          Length = 577

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 31/41 (75%), Positives = 35/41 (85%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
           +VK  IVLTP+FLSHD+ QLTKELQQHVKSVT P +Y RKV
Sbjct: 510 VVKAFIVLTPQFLSHDKDQLTKELQQHVKSVTAPYKYPRKV 550


>gi|58082049 acyl-CoA synthetase medium-chain family member 2A [Homo
           sapiens]
          Length = 577

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 27/41 (65%), Positives = 32/41 (78%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
           +VK  +VL  +FLSHD  QLTKELQQHVKSVT P +Y RK+
Sbjct: 504 VVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 544


>gi|239756507 PREDICTED: similar to Acyl-coenzyme A synthetase
           ACSM2B, mitochondrial isoform 2 [Homo sapiens]
          Length = 571

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 26/41 (63%), Positives = 32/41 (78%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
           +VK  ++L  +FLSHD  QLTKELQQHVKSVT P +Y RK+
Sbjct: 498 VVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 538


>gi|239756505 PREDICTED: similar to Acyl-coenzyme A synthetase
           ACSM2B, mitochondrial isoform 1 [Homo sapiens]
          Length = 571

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 26/41 (63%), Positives = 32/41 (78%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
           +VK  ++L  +FLSHD  QLTKELQQHVKSVT P +Y RK+
Sbjct: 498 VVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 538


>gi|157311624 acyl-CoA synthetase medium-chain family member 2B
           [Homo sapiens]
          Length = 577

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 26/41 (63%), Positives = 32/41 (78%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
           +VK  ++L  +FLSHD  QLTKELQQHVKSVT P +Y RK+
Sbjct: 504 VVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 544


>gi|157311622 acyl-CoA synthetase medium-chain family member 2B
           [Homo sapiens]
          Length = 577

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 26/41 (63%), Positives = 32/41 (78%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
           +VK  ++L  +FLSHD  QLTKELQQHVKSVT P +Y RK+
Sbjct: 504 VVKAFVILASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 544


>gi|38505220 acyl-CoA synthetase medium-chain family member 5 [Homo
           sapiens]
          Length = 579

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 30/41 (73%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
           +VK  IVLTP + SHD   LT+ELQ+HVK VT P +Y RKV
Sbjct: 513 VVKAFIVLTPAYSSHDPEALTRELQEHVKRVTAPYKYPRKV 553


>gi|42544132 SA hypertension-associated homolog isoform 1 [Homo
           sapiens]
          Length = 586

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 23/41 (56%), Positives = 29/41 (70%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
           +VK  +VL P + SHDQ QL KE+Q+HVK  T P +Y RKV
Sbjct: 519 VVKAFVVLNPDYKSHDQEQLIKEIQEHVKKTTAPYKYPRKV 559


>gi|122937307 acyl-CoA synthetase medium-chain family member 4 [Homo
           sapiens]
          Length = 580

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 20/41 (48%), Positives = 26/41 (63%)

Query: 1   MVKLSIVLTPRFLSHDQGQLTKELQQHVKSVTCPCEYLRKV 41
           +VK  +VL   F S++  +LT ELQ HVK  T P +Y RKV
Sbjct: 513 VVKAFVVLAAPFKSYNPEKLTLELQDHVKKSTAPYKYPRKV 553


>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
            sapiens]
          Length = 1907

 Score = 35.8 bits (81), Expect = 0.051
 Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 35/216 (16%)

Query: 37   YLRK-VINTLADHRHRGTDFGGSPWL-LIITVFLRSYKFAISLCTSYLCV---------- 84
            YL K ++ TL D    G DF G PW  + IT FL    FAI L  + L V          
Sbjct: 1155 YLTKSLVATLPDDVQPGPDFYGLPWKPVFITAFLGIASFAIFLWRTVLVVKDRVYQVTEQ 1214

Query: 85   ---SFLKTIFPSQNG-HDGSTDVQQRARRSNRRRQEGIK--IVLED--------IFTLWR 130
                 LKTI           ++ +Q+ + S +  QE  K  ++L D        I TL +
Sbjct: 1215 QISEKLKTIMKENTELVQKLSNYEQKIKESKKHVQETRKQNMILSDEAIKYKDKIKTLEK 1274

Query: 131  QVE-----TKVRAKICKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSE 185
              E      K    + + +    V   D I+  +K+ ++    +SM   E  E +  ++E
Sbjct: 1275 NQEILDDTAKNLRVMLESEREQNVKNQDLISENKKSIEKLKDVISMNASEFSEVQIALNE 1334

Query: 186  AEENGKLDMKEIHTYME----MFQRAQALRRRAEDY 217
            A+ + +    E H   E    + ++ + L++  ED+
Sbjct: 1335 AKLSEEKVKSECHRVQEENARLKKKKEQLQQEIEDW 1370



 Score = 33.9 bits (76), Expect = 0.20
 Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 25/140 (17%)

Query: 113  RRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDK---------INGKRKTAK 163
            R Q  I +V ED+  L  ++   V  K C ++   K    D+         +  + KT +
Sbjct: 1459 RTQTAISVVEEDLKLLQLKLRASVSTK-CNLEDQVKKLEDDRNSLQAAKAGLEDECKTLR 1517

Query: 164  EHL---------------RKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQ 208
            + +               +KLS +E E  E+E ++S A+E      +E+ TY    +  +
Sbjct: 1518 QKVEILNELYQQKEMALQKKLSQEEYERQEREHRLSAADEKAVSAAEEVKTYKRRIEEME 1577

Query: 209  ALRRRAEDYYRCKITPSARK 228
               ++ E  ++ +I    +K
Sbjct: 1578 DELQKTERSFKNQIATHEKK 1597


>gi|87299628 biorientation of chromosomes in cell division 1-like
           [Homo sapiens]
          Length = 3051

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 100 STDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKR 159
           S D+++ + +S   +   IK VL++     R+V  K   K+   K   K +R+ + N K+
Sbjct: 538 SVDLEESSTKSLEPKAARIKEVLKE-----RKVLEK---KVALSKKRKKDSRNVEENSKK 589

Query: 160 KTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQAL 210
           K   E   K ++K  EH EKE+  S  E      +K +H   E  + A+ L
Sbjct: 590 KQQYEEDSKETLKTSEHCEKEKISSSKE------LKHVHAKSEPSKPARRL 634


>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
           sapiens]
          Length = 373

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 22/114 (19%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 104 QQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTAK 163
           QQ  +R     +E  KI+ E+    W Q + + + K    +   K+N+  +    ++  K
Sbjct: 170 QQLEKRKEMEEREKRKIIAEEKHKEWVQKKNEQKRK----EREQKINKEMEEKAAKELEK 225

Query: 164 EHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDY 217
           E+L++ + ++ +   K++   E E   K   KE     E+ ++ +   ++ +++
Sbjct: 226 EYLQEKAKEKYQEWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKFQEW 279


>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
          Length = 1312

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 26/128 (20%), Positives = 61/128 (47%), Gaps = 14/128 (10%)

Query: 103 VQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTA 162
           + QR RR   +++E             R+VE + R +  + K+  K  +  ++   +   
Sbjct: 391 LHQRQRRIEEQKEER------------RRVEEQQRREREQRKLQEKEQQR-RLEDMQALR 437

Query: 163 KEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKI 222
           +E  R+ + +E+E+  K+ +     E  +  +++ H Y++  Q+ Q  +++ +   + ++
Sbjct: 438 REEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYLKSLQQQQQ-QQQLQKQQQQQL 496

Query: 223 TPSARKPL 230
            P  RKPL
Sbjct: 497 LPGDRKPL 504


>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
          Length = 1303

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 26/128 (20%), Positives = 61/128 (47%), Gaps = 14/128 (10%)

Query: 103 VQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRKTA 162
           + QR RR   +++E             R+VE + R +  + K+  K  +  ++   +   
Sbjct: 391 LHQRQRRIEEQKEER------------RRVEEQQRREREQRKLQEKEQQR-RLEDMQALR 437

Query: 163 KEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKI 222
           +E  R+ + +E+E+  K+ +     E  +  +++ H Y++  Q+ Q  +++ +   + ++
Sbjct: 438 REEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYLKSLQQQQQ-QQQLQKQQQQQL 496

Query: 223 TPSARKPL 230
            P  RKPL
Sbjct: 497 LPGDRKPL 504


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,148,027
Number of Sequences: 37866
Number of extensions: 532230
Number of successful extensions: 2569
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 2360
Number of HSP's gapped (non-prelim): 231
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press