Search of human proteins with 239745374

Search of human proteins with 239745374

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745374 PREDICTED: hypothetical protein XP_002343449 [Homo
sapiens]
         (144 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756435 PREDICTED: hypothetical protein [Homo sapiens]           295   9e-81
gi|239750968 PREDICTED: hypothetical protein XP_002347619 [Homo ...   295   9e-81
gi|239745374 PREDICTED: hypothetical protein XP_002343449 [Homo ...   295   9e-81
gi|239745437 PREDICTED: hypothetical protein XP_002343466 [Homo ...   282   6e-77
gi|239745420 PREDICTED: hypothetical protein XP_002343461 [Homo ...   282   6e-77
gi|239756491 PREDICTED: hypothetical protein [Homo sapiens]           280   2e-76
gi|239745428 PREDICTED: hypothetical protein XP_002343462 [Homo ...   280   2e-76
gi|239745440 PREDICTED: hypothetical protein XP_002343467 [Homo ...   279   7e-76
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             33   0.11 
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo...    31   0.31 
gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens]                   30   0.70 
gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens]                    30   0.70 
gi|222418633 family with sequence similarity 71, member B [Homo ...    30   0.91 
gi|83367077 mucin 16 [Homo sapiens]                                    30   0.91 
gi|55743092 aristaless-like homeobox 4 [Homo sapiens]                  30   0.91 
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]                    30   0.91 
gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]      29   1.6  
gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]      29   1.6  
gi|148539844 deleted in malignant brain tumors 1 isoform c precu...    29   1.6  
gi|148539842 deleted in malignant brain tumors 1 isoform b precu...    29   1.6  
gi|148539840 deleted in malignant brain tumors 1 isoform a precu...    29   1.6  
gi|88758613 CD93 antigen precursor [Homo sapiens]                      28   2.0  
gi|4503357 docking protein 1 [Homo sapiens]                            28   2.7  
gi|116284382 G protein-coupled bile acid receptor 1 [Homo sapiens]     28   2.7  
gi|116284384 G protein-coupled bile acid receptor 1 [Homo sapiens]     28   2.7  
gi|24850109 G protein-coupled bile acid receptor 1 [Homo sapiens]      28   2.7  
gi|55750053 atrophin-1 [Homo sapiens]                                  28   3.5  
gi|55750041 atrophin-1 [Homo sapiens]                                  28   3.5  
gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]       28   3.5  
gi|161019170 mucin 5AC [Homo sapiens]                                  27   4.5  

>gi|239756435 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 144

 Score =  295 bits (755), Expect = 9e-81
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
           MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239750968 PREDICTED: hypothetical protein XP_002347619 [Homo
           sapiens]
          Length = 144

 Score =  295 bits (755), Expect = 9e-81
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
           MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239745374 PREDICTED: hypothetical protein XP_002343449 [Homo
           sapiens]
          Length = 144

 Score =  295 bits (755), Expect = 9e-81
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
           MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239745437 PREDICTED: hypothetical protein XP_002343466 [Homo
           sapiens]
          Length = 144

 Score =  282 bits (722), Expect = 6e-77
 Identities = 138/144 (95%), Positives = 141/144 (97%)

Query: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
           MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239745420 PREDICTED: hypothetical protein XP_002343461 [Homo
           sapiens]
          Length = 144

 Score =  282 bits (722), Expect = 6e-77
 Identities = 138/144 (95%), Positives = 141/144 (97%)

Query: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
           MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239756491 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 144

 Score =  280 bits (717), Expect = 2e-76
 Identities = 137/144 (95%), Positives = 140/144 (97%)

Query: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
           MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSF TVTRA+EYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFRTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239745428 PREDICTED: hypothetical protein XP_002343462 [Homo
           sapiens]
          Length = 144

 Score =  280 bits (717), Expect = 2e-76
 Identities = 137/144 (95%), Positives = 140/144 (97%)

Query: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
           MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSF TVTRA+EYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFRTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|239745440 PREDICTED: hypothetical protein XP_002343467 [Homo
           sapiens]
          Length = 144

 Score =  279 bits (713), Expect = 7e-76
 Identities = 137/144 (95%), Positives = 140/144 (97%)

Query: 1   MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60
           MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP
Sbjct: 1   MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60

Query: 61  GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120
           GSTLAVS CSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP
Sbjct: 61  GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120

Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144
           SWSCTTTARPTSKCGLKPGGSTAP
Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 32.7 bits (73), Expect = 0.11
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 5/114 (4%)

Query: 30   QNRAALTSFSTVTRANEYSMTCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKD 89
            Q  ++LTS    T +  + M     A  +SP      SP + T  P+A  + S       
Sbjct: 2231 QQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIATGVSSSASGPST 2290

Query: 90   LR----AEGGGEQVAV-SGAPSHGLAHLLRATTAAPSWSCTTTARPTSKCGLKP 138
                  +     Q+ V S  P+  L+     TT++ S   TTT+ P + C +KP
Sbjct: 2291 ANYNSFSSASMPQIPVASVTPTASLSGAGTYTTSSLSTKSTTTSDPPNICKVKP 2344


>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
           polymerase [Homo sapiens]
          Length = 1327

 Score = 31.2 bits (69), Expect = 0.31
 Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 10/69 (14%)

Query: 37  SFSTVTRANEYSMTCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGG 96
           S S  + ++  S T   S+  SSPGS+LA SP +  VS  A PLG G        A G G
Sbjct: 123 SGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTA-PLGPG--------AAGPG 173

Query: 97  EQV-AVSGA 104
             V AVSGA
Sbjct: 174 TGVPAVSGA 182


>gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens]
          Length = 296

 Score = 30.0 bits (66), Expect = 0.70
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 81  GSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTS 132
           GSG  ++      GGG  +A+S  PS G+  LL    AA S S ++++  +S
Sbjct: 65  GSGCTLSPPQGCGGGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASS 116


>gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens]
          Length = 333

 Score = 30.0 bits (66), Expect = 0.70
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 81  GSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTS 132
           GSG  ++      GGG  +A+S  PS G+  LL    AA S S ++++  +S
Sbjct: 65  GSGCTLSPPQGCGGGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASS 116


>gi|222418633 family with sequence similarity 71, member B [Homo
           sapiens]
          Length = 605

 Score = 29.6 bits (65), Expect = 0.91
 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 29  GQNRAALTSFSTVTRANEYSMTCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAK 88
           G+N++A ++ +   +A++ S      + R++PGS   V+   + V  VA  +    + AK
Sbjct: 516 GKNQSASSTGALQKKASKISSFL--RSLRATPGSKTRVTSHDREVDIVAKMVEKQNIEAK 573

Query: 89  DLRAEGGGEQVAVSG 103
             +A+GG E   +SG
Sbjct: 574 VEKAQGGQELEMISG 588


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 29.6 bits (65), Expect = 0.91
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 88  KDLRAEGGGEQVAVSGAPSHGLAHLLRATTA----APSWSCTTTARPTSK 133
           ++LR  G       S   +HG + +LRATT+    A SW+  +TA+  S+
Sbjct: 481 RELRTTGSTSGRQSSSTAAHGSSDILRATTSSTSKASSWTSESTAQQFSE 530


>gi|55743092 aristaless-like homeobox 4 [Homo sapiens]
          Length = 411

 Score = 29.6 bits (65), Expect = 0.91
 Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 21/97 (21%)

Query: 29  GQNRAALTSFST------VTRANEYSMT---CW---GSACRSSPGSTLAVSPCSQTVSPV 76
           GQ +   T FST      +TRA  Y+      W     A    P   +   P    +SP 
Sbjct: 276 GQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPACMSPH 335

Query: 77  ALPLGSGRVMAKDLRAEGGGEQVAVSGAPSH-GLAHL 112
           A P GSG     D         ++VSGA SH G  H+
Sbjct: 336 AHPPGSGASSVTDF--------LSVSGAGSHVGQTHM 364


>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
          Length = 1711

 Score = 29.6 bits (65), Expect = 0.91
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 8/81 (9%)

Query: 64  LAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWS 123
           +A  P  + V+PV L L S +     L  +  G  + ++  P    +HL   +T      
Sbjct: 910 IAAKPYEEQVNPVLLTL-SPQTGTLALSVQPSGGDIRMNQGPEESESHLCSDSTPKMEG- 967

Query: 124 CTTTARPTSKCGLKPGGSTAP 144
                 P   CGLK  G T P
Sbjct: 968 ------PQGACGLKLAGDTKP 982


>gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]
          Length = 1662

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 910  WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 969

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 970  HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1016


>gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]
          Length = 1788

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 1036 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1095

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 1096 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1142


>gi|148539844 deleted in malignant brain tumors 1 isoform c precursor
            [Homo sapiens]
          Length = 2403

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 1651 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1710

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 1711 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1757


>gi|148539842 deleted in malignant brain tumors 1 isoform b precursor
            [Homo sapiens]
          Length = 2413

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 1661 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1720

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 1721 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1767


>gi|148539840 deleted in malignant brain tumors 1 isoform a precursor
            [Homo sapiens]
          Length = 1785

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)

Query: 52   WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100
            WG+ C  S  +  A   C Q     A+          GSG ++  D+R  G    +    
Sbjct: 1033 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1092

Query: 101  VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135
              G  +H   H      +  AT    T    W  + TTTARP+S CG
Sbjct: 1093 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1139


>gi|88758613 CD93 antigen precursor [Homo sapiens]
          Length = 652

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 56  CRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKDL-RAEGGGEQVAVSGAPSHGLAHLLR 114
           C   PG  LA +  S T+ PV+L   SG    +D    EG     A + +P+ G     +
Sbjct: 452 CGCLPGWVLAPNGVSCTMGPVSLGPPSGPPDEEDKGEKEGSTVPRAATASPTRGPEGTPK 511

Query: 115 A--TTAAPSWSCTTTARPTSKCGLKPGGS 141
           A  TT+ PS S            L P GS
Sbjct: 512 ATPTTSRPSLSSDAPITSAPLKMLAPSGS 540


>gi|4503357 docking protein 1 [Homo sapiens]
          Length = 481

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 68  PCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLA--HLLRATTAAPSWSCT 125
           P  ++  P+  P   G    +   A G       SG  SH  A    ++ + A+ SW C 
Sbjct: 412 PPPRSTKPLLAPKPQGPAFPEPGTATG-------SGIKSHNSALYSQVQKSGASGSWDCG 464

Query: 126 TTARPTSKCGLKPGGST 142
            +   T K G+K  GST
Sbjct: 465 LSRVGTDKTGVKSEGST 481


>gi|116284382 G protein-coupled bile acid receptor 1 [Homo sapiens]
          Length = 330

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 52  WGSACRSSPGSTLAVSPCSQT 72
           WG A R SPG ++A  P SQ+
Sbjct: 303 WGRASRDSPGPSIAYHPSSQS 323


>gi|116284384 G protein-coupled bile acid receptor 1 [Homo sapiens]
          Length = 330

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 52  WGSACRSSPGSTLAVSPCSQT 72
           WG A R SPG ++A  P SQ+
Sbjct: 303 WGRASRDSPGPSIAYHPSSQS 323


>gi|24850109 G protein-coupled bile acid receptor 1 [Homo sapiens]
          Length = 330

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 52  WGSACRSSPGSTLAVSPCSQT 72
           WG A R SPG ++A  P SQ+
Sbjct: 303 WGRASRDSPGPSIAYHPSSQS 323


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 20/70 (28%), Positives = 27/70 (38%)

Query: 75  PVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTSKC 134
           P   P G+G V++       GG   +  G P+ G  H    T  + S S  + A PT   
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPP 276

Query: 135 GLKPGGSTAP 144
               GG   P
Sbjct: 277 TTPVGGGNLP 286


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 20/70 (28%), Positives = 27/70 (38%)

Query: 75  PVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTSKC 134
           P   P G+G V++       GG   +  G P+ G  H    T  + S S  + A PT   
Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPP 276

Query: 135 GLKPGGSTAP 144
               GG   P
Sbjct: 277 TTPVGGGNLP 286


>gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens]
          Length = 554

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)

Query: 129 RPTSKCGLKPGGSTA 143
           RP SKCG++PGG  A
Sbjct: 3   RPLSKCGMEPGGGDA 17


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 27.3 bits (59), Expect = 4.5
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 31   NRAALTSFSTVTRANEYSM-TCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKD 89
            N  A T   +++ ++ +++ T W SA   + G+T    P + T    A   G+ +     
Sbjct: 4479 NTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPA 4538

Query: 90   LRAEGGGEQVAVSG------APSHGLAHLLRATTAAPSWSCTTTARPTS 132
            L +     +   S        P H  A      TA PS + T+T  P+S
Sbjct: 4539 LSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSS 4587



 Score = 26.9 bits (58), Expect = 5.9
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 31   NRAALTSFSTVTRANEYSM-TCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKD 89
            N  A T   +++ ++ +++ T W SA   + G+T    P + T    A   G+ +     
Sbjct: 3332 NTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPA 3391

Query: 90   LRAEGGGEQVAVSG------APSHGLAHLLRATTAAPSWSCTTTARPTS 132
            L +     +   S        P H  A      TA PS + T+T  P+S
Sbjct: 3392 LSSPHPSSRTTESPPSPGTTTPGHTRATSRTTATATPSKTRTSTLLPSS 3440



 Score = 26.6 bits (57), Expect = 7.7
 Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 6/89 (6%)

Query: 50   TCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSG------ 103
            T W SA     G+T    P + T   +A   G+ +     L +     +   S       
Sbjct: 2850 TAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQHSTPALSSPHPSSRTTESPPSPGTT 2909

Query: 104  APSHGLAHLLRATTAAPSWSCTTTARPTS 132
             P H  A      TA PS + T+T  P+S
Sbjct: 2910 TPGHTTATSRTTATATPSKTRTSTLLPSS 2938


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.126    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,231,078
Number of Sequences: 37866
Number of extensions: 269540
Number of successful extensions: 1021
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 982
Number of HSP's gapped (non-prelim): 64
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.