Search of human proteins with 239745342

Search of human proteins with 239745342

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo
sapiens]
         (230 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo ...   492   e-140
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ...    45   4e-05
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]        44   2e-04
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     43   3e-04
gi|92859678 small nuclear RNA activating complex, polypeptide 4,...    42   6e-04
gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens]         41   8e-04
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    41   0.001
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    41   0.001
gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens]           41   0.001
gi|58218966 hypothetical protein LOC339201 [Homo sapiens]              40   0.001
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               40   0.002
gi|62945417 dystrophia myotonica-containing WD repeat motif prot...    40   0.002
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ...    40   0.002
gi|134142824 forkhead box D2 [Homo sapiens]                            40   0.002
gi|168229174 RNA binding motif protein 27 [Homo sapiens]               40   0.002
gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ...    39   0.003
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    39   0.003
gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ...    39   0.003
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    39   0.004
gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]              39   0.004
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      39   0.004
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      39   0.004
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    39   0.004
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]            39   0.004
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             39   0.004
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]            39   0.005
gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]            39   0.005
gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo ...    39   0.005

>gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo
           sapiens]
          Length = 230

 Score =  492 bits (1267), Expect = e-140
 Identities = 230/230 (100%), Positives = 230/230 (100%)

Query: 1   MREDVPVRVKAKLKLLASTFHKNQEPQPRLTLHCNRRWGARRRPRRAGRGRRWGSLGTNG 60
           MREDVPVRVKAKLKLLASTFHKNQEPQPRLTLHCNRRWGARRRPRRAGRGRRWGSLGTNG
Sbjct: 1   MREDVPVRVKAKLKLLASTFHKNQEPQPRLTLHCNRRWGARRRPRRAGRGRRWGSLGTNG 60

Query: 61  SLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRHAPR 120
           SLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRHAPR
Sbjct: 61  SLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRHAPR 120

Query: 121 WEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPASFEPRRGREKASEMLAFFAWARWRTP 180
           WEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPASFEPRRGREKASEMLAFFAWARWRTP
Sbjct: 121 WEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPASFEPRRGREKASEMLAFFAWARWRTP 180

Query: 181 VIPKCWDSRREPPRRDPRPLSFKASFFSQVFPVPACSANFLLLFCFCFCF 230
           VIPKCWDSRREPPRRDPRPLSFKASFFSQVFPVPACSANFLLLFCFCFCF
Sbjct: 181 VIPKCWDSRREPPRRDPRPLSFKASFFSQVFPVPACSANFLLLFCFCFCF 230


>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
           sapiens]
          Length = 402

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 62/228 (27%), Positives = 79/228 (34%), Gaps = 50/228 (21%)

Query: 17  ASTFHKNQEPQPRLTLHCNRRWGARRRPR---------RAGRGRRWGSLGTNGSLTGRGP 67
           AS+    + P  R+    + R GA +R           R+GRG    + G + SL  R  
Sbjct: 123 ASSAAAGKTPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCAGAARGPDASLDTRRE 182

Query: 68  GSP-----------------PLPPSAGPAPPPGLREAWVGGGGGRVSPAPG---AGLTRG 107
           G P                  +  S  P PP     +      GR  P P    AG TRG
Sbjct: 183 GWPRAAVVGRHEARRLKPGVSVSSSLSPGPPLQRSSSLNETLRGRRPPGPAPAAAGATRG 242

Query: 108 PLAPLGRRRHAPRWEPAAAGALLGPMVALSQRD----------------CSRDRDGAGRG 151
             AP GR   A  W   +A A   P+ A S                    SR ++G G G
Sbjct: 243 TAAPPGRDPSA--WFLDSASACPTPLAARSWHPFVANKLCGRGKGAGGGASRPKEGVGSG 300

Query: 152 APASFEPRRGREKASEMLAFFAWARWRTPVIPKCWDSRREPPRRDPRP 199
              ++EPR GRE              +T      W S RE PR   RP
Sbjct: 301 RARAWEPRGGRESGRSRRRKSLLEDLQTEA--TLWPS-REVPREPSRP 345


>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
          Length = 380

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 50/153 (32%), Positives = 59/153 (38%), Gaps = 21/153 (13%)

Query: 51  RRWGSLGTNGSLTGRGPGSPP-LPPSAGPAPPPGLREAWV----GGGGGRVSPAPGAGLT 105
           RR  + G   +    GP  PP  PP  GP PPPGL  + V     G GG   PAP     
Sbjct: 154 RRVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAA 213

Query: 106 RGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPASFEPRR--GRE 163
           +G   P G    AP    A AGA L        R  S+  + +G       E  R  G  
Sbjct: 214 QG---PGGGGAGAPGLAAAIAGAKL--------RKVSKQEEASGGPTAPKAESGRSGGGG 262

Query: 164 KASEMLAFFAWARWRTPV---IPKCWDSRREPP 193
              EM A  A  R  T V    PK   + +E P
Sbjct: 263 LMEEMNAMLARRRKATQVGEKTPKDESANQEEP 295


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 34/83 (40%), Positives = 36/83 (43%), Gaps = 13/83 (15%)

Query: 46  RAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLT 105
           R  RG R G  G  G     GP  PP PP  GP  PPGL     GG         G GL 
Sbjct: 38  RGPRGER-GPPGPPGRDGEDGPTGPPGPP--GPPGPPGL-----GGNFAAQYDGKGVGLG 89

Query: 106 RGPLAPLGRRRHAPRWEPAAAGA 128
            GP+  +G     PR  P AAGA
Sbjct: 90  PGPMGLMG-----PRGPPGAAGA 107



 Score = 37.4 bits (85), Expect = 0.011
 Identities = 34/102 (33%), Positives = 35/102 (34%), Gaps = 11/102 (10%)

Query: 37  RWGARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLR-EAWVGGGGGR 95
           R GAR  P   G     G+ G  G     GP  P     AGP   PG R E    G  G 
Sbjct: 671 RDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGP-----AGPRGSPGERGEVGPAGPNGF 725

Query: 96  VSPA-----PGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGP 132
             PA     PGA   RG   P G         P  A    GP
Sbjct: 726 AGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGP 767



 Score = 36.2 bits (82), Expect = 0.024
 Identities = 31/94 (32%), Positives = 36/94 (38%), Gaps = 2/94 (2%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           GA  +P   G     G  G NG +   GP     P  AGP  PPG   +   GG   ++ 
Sbjct: 730 GAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGP--AGPNGPPGPAGSRGDGGPPGMTG 787

Query: 99  APGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGP 132
            PGA    GP  P G         PA    L GP
Sbjct: 788 FPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGP 821



 Score = 35.0 bits (79), Expect = 0.054
 Identities = 31/89 (34%), Positives = 32/89 (35%), Gaps = 4/89 (4%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           GAR  P   G     G  G  G   G+G   PP PP     P P      VG  G R   
Sbjct: 517 GARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGER--G 574

Query: 99  APGAGLTRGPLAPLGRRRHAPRWEPAAAG 127
             G     GP  P G R   P  E  AAG
Sbjct: 575 LHGEFGLPGPAGPRGER--GPPGESGAAG 601



 Score = 34.7 bits (78), Expect = 0.070
 Identities = 31/90 (34%), Positives = 32/90 (35%), Gaps = 19/90 (21%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPP-------------SAGPAPPPGLR 85
           GAR      G     G  G  G     GP  PP P              SAGP  PPGLR
Sbjct: 340 GARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLR 399

Query: 86  EAWVGGGGGRVSPAPGAGLTRGPLAPLGRR 115
               G  G R    PGA    G + P G R
Sbjct: 400 ----GSPGSR--GLPGADGRAGVMGPPGSR 423



 Score = 32.7 bits (73), Expect = 0.27
 Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 39   GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGG 93
            G   +  R G     G  G  G    +GP  PP PP  GP  PPG     V GGG
Sbjct: 1060 GPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPP--GPPGPPG-----VSGGG 1107



 Score = 31.2 bits (69), Expect = 0.78
 Identities = 32/85 (37%), Positives = 33/85 (38%), Gaps = 10/85 (11%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLP-PSAGP-----APPPGLREAWVGGG 92
           GAR  P   GR    G  G  GS    GP  P  P  SAGP     AP P      VG  
Sbjct: 214 GARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNA 273

Query: 93  G--GRVSPAPGAGL--TRGPLAPLG 113
           G  G   P    GL    GP+ P G
Sbjct: 274 GPAGPAGPRGEVGLPGLSGPVGPPG 298



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 37/137 (27%), Positives = 43/137 (31%), Gaps = 43/137 (31%)

Query: 54  GSLGTNGSLTGRGPGSPPLPP-------------SAGPAPPPGLR----EAWVGGGGGRV 96
           G+ G  G +  RGP  PP P              +AGP+ P GL      A + GG G  
Sbjct: 598 GAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEK 657

Query: 97  SP-----------------APGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQR 139
                              APGA    GP    G R          AGA  GP      R
Sbjct: 658 GEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDR--------GEAGA-AGPAGPAGPR 708

Query: 140 DCSRDRDGAGRGAPASF 156
               +R   G   P  F
Sbjct: 709 GSPGERGEVGPAGPNGF 725


>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
           190kDa [Homo sapiens]
          Length = 1469

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 3/117 (2%)

Query: 36  RRWGARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGR 95
           ++ G RRR RRA    RW S  ++GS +G   GS     S+     P   +A   G G R
Sbjct: 501 KKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSSSSEEDEPEQAQA---GEGDR 557

Query: 96  VSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDGAGRGA 152
              +P   +    L    R+  +  W   A   L GP  +LS    S    G  + A
Sbjct: 558 ALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSPPKGSSASQGGSKEA 614


>gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens]
          Length = 924

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 30/68 (44%), Positives = 32/68 (47%), Gaps = 22/68 (32%)

Query: 38  WGARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRV- 96
           WG RRR     R  RWG LG         PGS PL P   P PPP    +  G GGGR+ 
Sbjct: 7   WGGRRR-----RLGRWGDLG---------PGSVPLLPMPLPPPPP---PSCRGPGGGRIS 49

Query: 97  ----SPAP 100
               SPAP
Sbjct: 50  IFSLSPAP 57


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 16/90 (17%)

Query: 49  RGRRWGSLGTNGSLTGRG-------PGSPPLPPSAGPAPPPGLR---EAWVGGGGGRVSP 98
           RG R G  G  G+   RG       PG+P  P   GP  PPGL     A + GG    + 
Sbjct: 134 RGDR-GDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAG 192

Query: 99  APGAGLTRGPLAPLGRRRHAPRWEPAAAGA 128
               G+ +GP+ P+G     PR  P  AGA
Sbjct: 193 GAQLGVMQGPMGPMG-----PRGPPGPAGA 217



 Score = 37.0 bits (84), Expect = 0.014
 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 4/89 (4%)

Query: 47  AGRGRRWGSLGTNGSLTGRG-PGSPPLPPSAGPAPPPGLREAWVGGGGGRV---SPAPGA 102
           AG+  + G  G  G    RG PG+P LP   G    PGL  A    G   V   S +PG 
Sbjct: 257 AGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGE 316

Query: 103 GLTRGPLAPLGRRRHAPRWEPAAAGALLG 131
             + GP+ P G      R  PA A    G
Sbjct: 317 NGSPGPMGPRGLPGERGRTGPAGAAGARG 345



 Score = 36.6 bits (83), Expect = 0.018
 Identities = 30/94 (31%), Positives = 34/94 (36%), Gaps = 21/94 (22%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           G R  P   GR    G+ G  G+    GP  PP P   GPA  PG               
Sbjct: 324 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGP--VGPAGGPGF-------------- 367

Query: 99  APGAGLTRGPLAPLGRR----RHAPRWEPAAAGA 128
            PGA   +G   P G R       PR EP   G+
Sbjct: 368 -PGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS 400



 Score = 35.8 bits (81), Expect = 0.032
 Identities = 33/91 (36%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 39   GARRRPRRAGRGRRWGSLGTNGSLTGRG-PGSPPLPPSAGPAPPPGLR-EAWVGGGGGRV 96
            GA   P R G     G  G  G++   G PG P  P  AGP    G R EA   G  G  
Sbjct: 1041 GADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPS 1100

Query: 97   SPAPGAGLTRGPLAPLGRRRHAPRWEPAAAG 127
             PA   G+ +GP  P G +  A   EP   G
Sbjct: 1101 GPAGARGI-QGPQGPRGDKGEA--GEPGERG 1128



 Score = 32.3 bits (72), Expect = 0.35
 Identities = 37/114 (32%), Positives = 42/114 (36%), Gaps = 24/114 (21%)

Query: 39   GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPS-AGPAPPPGLREAWVGGGG--GR 95
            G R  P   G     G  G  G+   RGP  P  PP   GPA  PG RE   G  G  GR
Sbjct: 990  GERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPG-REGSPGADGPPGR 1048

Query: 96   -----------------VSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGP 132
                                APG   + GP  P G++    R E  A G  +GP
Sbjct: 1049 DGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQ--GDRGEAGAQGP-MGP 1099



 Score = 32.0 bits (71), Expect = 0.46
 Identities = 37/144 (25%), Positives = 49/144 (34%), Gaps = 32/144 (22%)

Query: 44  PRRAGRGRRWGSLGTNGSLTGRG----PGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPA 99
           P   G     G+ G  G+   RG    PGSP    ++G     G+  A    G   ++ A
Sbjct: 371 PGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGA 430

Query: 100 PGAGLTRGPLAPLG-------------------RRRHAPRWEPAAAG--ALLGPMVALSQ 138
           PG    RGP  P G                   +    P+ EP  AG     GP     +
Sbjct: 431 PGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGK 490

Query: 139 RDCSRDRDGAG-------RGAPAS 155
           R    +  G G       RGAP +
Sbjct: 491 RGARGEPGGVGPIGPPGERGAPGN 514



 Score = 32.0 bits (71), Expect = 0.46
 Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 8/101 (7%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           GA+  P   G     G +G  GS    GP  PP P  +G   P G R     G  G    
Sbjct: 888 GAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGP--SGKDGPKGAR-----GDSGPPGR 940

Query: 99  APGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQR 139
           A   GL +GP  P G +       P+ A    GP     QR
Sbjct: 941 AGEPGL-QGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 980



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 33/118 (27%), Positives = 39/118 (33%), Gaps = 20/118 (16%)

Query: 54  GSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLR-------EAWVGGGGGRVSPAPGAGLTR 106
           G+ GT+G     GP  PP     G   PPGL+        A + G  G        G   
Sbjct: 723 GTPGTDGPKGASGPAGPP-----GAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEG 777

Query: 107 GPLAPLGRRRHAPRWEPAAAGA--------LLGPMVALSQRDCSRDRDGAGRGAPASF 156
            P    GR    P   P  AGA          GP  +   R    +R   G   PA F
Sbjct: 778 APGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGF 835



 Score = 28.9 bits (63), Expect = 3.9
 Identities = 26/77 (33%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           G R  P  AG     G  G  G      PG P +    GP  PPG       G  G    
Sbjct: 207 GPRGPPGPAGAPGPQGFQGNPGE-----PGEPGVSGPMGPRGPPG--PPGKPGDDGEAG- 258

Query: 99  APGAGLTRGPLAPLGRR 115
            PG    RGP  P G R
Sbjct: 259 KPGKAGERGPPGPQGAR 275


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 16/90 (17%)

Query: 49  RGRRWGSLGTNGSLTGRG-------PGSPPLPPSAGPAPPPGLR---EAWVGGGGGRVSP 98
           RG R G  G  G+   RG       PG+P  P   GP  PPGL     A + GG    + 
Sbjct: 65  RGDR-GDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAG 123

Query: 99  APGAGLTRGPLAPLGRRRHAPRWEPAAAGA 128
               G+ +GP+ P+G     PR  P  AGA
Sbjct: 124 GAQLGVMQGPMGPMG-----PRGPPGPAGA 148



 Score = 37.0 bits (84), Expect = 0.014
 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 4/89 (4%)

Query: 47  AGRGRRWGSLGTNGSLTGRG-PGSPPLPPSAGPAPPPGLREAWVGGGGGRV---SPAPGA 102
           AG+  + G  G  G    RG PG+P LP   G    PGL  A    G   V   S +PG 
Sbjct: 188 AGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGE 247

Query: 103 GLTRGPLAPLGRRRHAPRWEPAAAGALLG 131
             + GP+ P G      R  PA A    G
Sbjct: 248 NGSPGPMGPRGLPGERGRTGPAGAAGARG 276



 Score = 36.6 bits (83), Expect = 0.018
 Identities = 30/94 (31%), Positives = 34/94 (36%), Gaps = 21/94 (22%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           G R  P   GR    G+ G  G+    GP  PP P   GPA  PG               
Sbjct: 255 GPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGP--VGPAGGPGF-------------- 298

Query: 99  APGAGLTRGPLAPLGRR----RHAPRWEPAAAGA 128
            PGA   +G   P G R       PR EP   G+
Sbjct: 299 -PGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS 331



 Score = 35.8 bits (81), Expect = 0.032
 Identities = 33/91 (36%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 39   GARRRPRRAGRGRRWGSLGTNGSLTGRG-PGSPPLPPSAGPAPPPGLR-EAWVGGGGGRV 96
            GA   P R G     G  G  G++   G PG P  P  AGP    G R EA   G  G  
Sbjct: 972  GADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPS 1031

Query: 97   SPAPGAGLTRGPLAPLGRRRHAPRWEPAAAG 127
             PA   G+ +GP  P G +  A   EP   G
Sbjct: 1032 GPAGARGI-QGPQGPRGDKGEA--GEPGERG 1059



 Score = 32.3 bits (72), Expect = 0.35
 Identities = 37/114 (32%), Positives = 42/114 (36%), Gaps = 24/114 (21%)

Query: 39   GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPS-AGPAPPPGLREAWVGGGG--GR 95
            G R  P   G     G  G  G+   RGP  P  PP   GPA  PG RE   G  G  GR
Sbjct: 921  GERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPG-REGSPGADGPPGR 979

Query: 96   -----------------VSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGP 132
                                APG   + GP  P G++    R E  A G  +GP
Sbjct: 980  DGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQ--GDRGEAGAQGP-MGP 1030



 Score = 32.0 bits (71), Expect = 0.46
 Identities = 37/144 (25%), Positives = 49/144 (34%), Gaps = 32/144 (22%)

Query: 44  PRRAGRGRRWGSLGTNGSLTGRG----PGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPA 99
           P   G     G+ G  G+   RG    PGSP    ++G     G+  A    G   ++ A
Sbjct: 302 PGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGA 361

Query: 100 PGAGLTRGPLAPLG-------------------RRRHAPRWEPAAAG--ALLGPMVALSQ 138
           PG    RGP  P G                   +    P+ EP  AG     GP     +
Sbjct: 362 PGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGK 421

Query: 139 RDCSRDRDGAG-------RGAPAS 155
           R    +  G G       RGAP +
Sbjct: 422 RGARGEPGGVGPIGPPGERGAPGN 445



 Score = 32.0 bits (71), Expect = 0.46
 Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 8/101 (7%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           GA+  P   G     G +G  GS    GP  PP P  +G   P G R     G  G    
Sbjct: 819 GAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGP--SGKDGPKGAR-----GDSGPPGR 871

Query: 99  APGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQR 139
           A   GL +GP  P G +       P+ A    GP     QR
Sbjct: 872 AGEPGL-QGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 911



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 33/118 (27%), Positives = 39/118 (33%), Gaps = 20/118 (16%)

Query: 54  GSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLR-------EAWVGGGGGRVSPAPGAGLTR 106
           G+ GT+G     GP  PP     G   PPGL+        A + G  G        G   
Sbjct: 654 GTPGTDGPKGASGPAGPP-----GAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEG 708

Query: 107 GPLAPLGRRRHAPRWEPAAAGA--------LLGPMVALSQRDCSRDRDGAGRGAPASF 156
            P    GR    P   P  AGA          GP  +   R    +R   G   PA F
Sbjct: 709 APGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGF 766



 Score = 28.9 bits (63), Expect = 3.9
 Identities = 26/77 (33%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           G R  P  AG     G  G  G      PG P +    GP  PPG       G  G    
Sbjct: 138 GPRGPPGPAGAPGPQGFQGNPGE-----PGEPGVSGPMGPRGPPG--PPGKPGDDGEAG- 189

Query: 99  APGAGLTRGPLAPLGRR 115
            PG    RGP  P G R
Sbjct: 190 KPGKAGERGPPGPQGAR 206


>gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens]
          Length = 196

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 18/115 (15%)

Query: 59  NGSLTGRGPGSPPLPPSAGPAPP--PGLREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRR 116
           N  LT  GP  P  PP A PAP   P LR            PAP     R   A L RR+
Sbjct: 10  NKILTNDGPPGPETPPPA-PAPTARPRLR-----------LPAPD---WRARRADLTRRK 54

Query: 117 HAPRWEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPA-SFEPRRGREKASEMLA 170
              R EP + G   GP  A   +  S D   +G GAP+ S   R GR   S  LA
Sbjct: 55  GLRRGEPGSRGLGEGPAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLA 109



 Score = 32.7 bits (73), Expect = 0.27
 Identities = 34/103 (33%), Positives = 41/103 (39%), Gaps = 15/103 (14%)

Query: 27  QPRLTLHCNRRWGARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPP-------SAGPA 79
           +PRL L     W ARR      +G R G  G+ G   G GP +   P         +G  
Sbjct: 33  RPRLRLPAPD-WRARRADLTRRKGLRRGEPGSRG--LGEGPAAARRPQVQSIDTTPSGEG 89

Query: 80  PPPGLREAWVGGGGGRVS----PAPGAGLTRGPLAPLGRRRHA 118
            P   R    G  G   S    PAPG G   G L P G+R+ A
Sbjct: 90  APSFSRAQRPGRSGPSPSLASDPAPGRGAAWGSLRP-GKRQQA 131


>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
          Length = 193

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 14/97 (14%)

Query: 38  WGARRRPRRAGRGR-----RWGS-LGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGG 91
           WG +R PR A   R     RW            R PG    PP AG AP PG+  +++G 
Sbjct: 49  WGPQRGPRNAAAARPGPRSRWHKRCAAACGACARPPGHQLQPPGAG-APQPGVACSYLGP 107

Query: 92  GGGRV--SPAPGAGLTRGPLAPLGRRRHAPRWEPAAA 126
              R   S     G   GP     RRRHAP  EP  A
Sbjct: 108 RPQRTPCSAQSRPGWCAGP-----RRRHAPGTEPHVA 139


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 51/164 (31%), Positives = 64/164 (39%), Gaps = 30/164 (18%)

Query: 42  RRPRRAGRGR-RWGSLGTNG------SLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGG 94
           RR RR G G+ R    G +G      S+  R P + P P SA PA  P L       GG 
Sbjct: 258 RRRRRRGAGQPRTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLERV----GGH 313

Query: 95  RVSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPA 154
             SPA  +            R  A  WE  AA     P  A S  D   +    GR   A
Sbjct: 314 PTSPAALS------------RAWASSWESEAAPEPAAPPAAPSPPDSPAE----GRLVKA 357

Query: 155 SFEPRRGREKASEMLAFFAWARWRTPVIPKCWDSRREPPRRDPR 198
            + P  G + A+  L   A AR + P + +     + PPR  PR
Sbjct: 358 QYIP--GAQAATRGLPGRA-ARRKPPPLTRGRSVEQSPPRERPR 398



 Score = 34.7 bits (78), Expect = 0.070
 Identities = 42/159 (26%), Positives = 51/159 (32%), Gaps = 32/159 (20%)

Query: 67  PGSPPLPPSAGPAPPPG--LREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRHA----PR 120
           P +PP  PS   +P  G  ++  ++ G        PG    R P  PL R R      PR
Sbjct: 336 PAAPPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAARRKP-PPLTRGRSVEQSPPR 394

Query: 121 WEPAAAGALLGPMVALSQRDCSRDRDG-------------------------AGRGAPAS 155
             P AAG       A  +R   R R                           A R  P  
Sbjct: 395 ERPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLGRASAVPSGPPKYPTAEREEPRP 454

Query: 156 FEPRRGREKASEMLAFFAWARWRTPVIPKCWDSRREPPR 194
             PRRG        A  +  RWR+       D RR  PR
Sbjct: 455 PRPRRGPAPTLAAQAAGSCRRWRSTAEIDAADGRRVRPR 493


>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
           [Homo sapiens]
          Length = 674

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 59  NGSLTGRGPGSPPLP-PSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRH 117
           +G+    GP S   P P   P PPPG   A   G  G  S  P AG   GP  P  R   
Sbjct: 39  DGAARRSGPASAQTPVPPQPPQPPPGPASASGPGAAGPASSPPPAGPGPGPALPAVRLSL 98

Query: 118 APRWEPAAAGA 128
               EP +AGA
Sbjct: 99  VRLGEPDSAGA 109


>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 449

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 46/146 (31%), Positives = 53/146 (36%), Gaps = 39/146 (26%)

Query: 71  PLPPSAGPAPPPGLREAWVGGGGGRVSPAPGA-GLTRGPLAPLGRRRHAPRWEPAAAGAL 129
           PLPP   P   PG              PAP A G TRG  AP GR   A  W   +A A 
Sbjct: 269 PLPPQRRP---PG--------------PAPAAAGATRGTAAPPGRDPSA--WFLDSASAC 309

Query: 130 LGPMVALSQRD----------------CSRDRDGAGRGAPASFEPRRGREKASEMLAFFA 173
             P+ A S                    SR ++G G G   ++EPR GRE          
Sbjct: 310 PTPLAARSWHPFVANKLCGRGKGAGGGASRPKEGVGSGRARAWEPRGGRESGRSRRRKSL 369

Query: 174 WARWRTPVIPKCWDSRREPPRRDPRP 199
               +T      W S RE PR   RP
Sbjct: 370 LEDLQTEA--TLWPS-REVPREPSRP 392



 Score = 28.5 bits (62), Expect = 5.0
 Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 14/84 (16%)

Query: 48  GRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLR------EAWVGGGGGRVSPAPG 101
           G+  R G    + +  G+       PPS  PA P   R      E+W   G    S    
Sbjct: 113 GQAPRAGPSAASSAAAGK------TPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGC 166

Query: 102 AGLTRGPLAPLGRRRHAPRWEPAA 125
           AG  RGP A L  RR    W  AA
Sbjct: 167 AGAARGPDASLDTRREG--WPRAA 188


>gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 45/156 (28%), Positives = 52/156 (33%), Gaps = 34/156 (21%)

Query: 41  RRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAP--------PPGLREAWVGGG 92
           RR     G   RW + G  G+  G GPG+   PP   PAP            R  W   G
Sbjct: 34  RRLDEGGGVQGRWKNRG-RGTYRGAGPGAGSAPPGETPAPYTRRSGPRSRTWRRTWCWTG 92

Query: 93  -------------GGRVSPAPGAGLTRGPLAPLGRRRH--------AP-RWEPAAAGALL 130
                          R+SPA G G   GPLA L  R          AP    P    A  
Sbjct: 93  DSAAVGAAAVLACSARLSPADGFGAEEGPLAHLEERSEGWASTFLSAPGPQHPPTPPACS 152

Query: 131 GPMVALSQRDCSRDRDGAGRGAPASFEPRRGREKAS 166
           G          +R   G G G P   EP+R   + S
Sbjct: 153 GAATRREPPGNARQSRGVGAGKP---EPQRRPPRGS 185


>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
           sapiens]
          Length = 449

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 46/146 (31%), Positives = 53/146 (36%), Gaps = 39/146 (26%)

Query: 71  PLPPSAGPAPPPGLREAWVGGGGGRVSPAPGA-GLTRGPLAPLGRRRHAPRWEPAAAGAL 129
           PLPP   P   PG              PAP A G TRG  AP GR   A  W   +A A 
Sbjct: 269 PLPPQRRP---PG--------------PAPAAAGATRGTAAPPGRDPSA--WFLDSASAC 309

Query: 130 LGPMVALSQRD----------------CSRDRDGAGRGAPASFEPRRGREKASEMLAFFA 173
             P+ A S                    SR ++G G G   ++EPR GRE          
Sbjct: 310 PTPLAARSWHPFVANKLCGRGKGAGGGASRPKEGVGSGRARAWEPRGGRESGRSRRRKSL 369

Query: 174 WARWRTPVIPKCWDSRREPPRRDPRP 199
               +T      W S RE PR   RP
Sbjct: 370 LEDLQTEA--TLWPS-REVPREPSRP 392



 Score = 28.5 bits (62), Expect = 5.0
 Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 14/84 (16%)

Query: 48  GRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLR------EAWVGGGGGRVSPAPG 101
           G+  R G    + +  G+       PPS  PA P   R      E+W   G    S    
Sbjct: 113 GQAPRAGPSAASSAAAGK------TPPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGC 166

Query: 102 AGLTRGPLAPLGRRRHAPRWEPAA 125
           AG  RGP A L  RR    W  AA
Sbjct: 167 AGAARGPDASLDTRREG--WPRAA 188


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 34/102 (33%), Positives = 41/102 (40%), Gaps = 16/102 (15%)

Query: 72  LPPSAGPAPPPGLREAWV-GGGGGRVSPAPGAGLTRGPLAPLG------------RRRHA 118
           +PP    APPPG   A V  G G   +PAP +G   GP  P G            +  +A
Sbjct: 310 VPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGP-GPAGLPAFLGAELGCAKAFYA 368

Query: 119 PRWEPAAAGALLGPMVALSQRDCSRDRDG--AGRGAPASFEP 158
               P AAG   G   AL ++    D  G   G GA A   P
Sbjct: 369 ASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRP 410


>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
          Length = 1060

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 70  PPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRHAPR--WEPAAAG 127
           PP PP   P PPPG+    + G G    P PG G   GP      R   P+   +P  + 
Sbjct: 317 PPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSV 376

Query: 128 ALLGPMVALSQRDCSRDRDGAGRGA 152
            L  P   ++Q      RD  G  A
Sbjct: 377 VLPIPRPPITQSSLINSRDQPGTSA 401


>gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo
           sapiens]
          Length = 492

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 40/105 (38%), Positives = 44/105 (41%), Gaps = 30/105 (28%)

Query: 41  RRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGG--GGR--V 96
           R RPRR    RRW  L    S    G  +PPLP      PP  +  A  G G  GGR  +
Sbjct: 374 RARPRR----RRWEPLRAQRSGARPGAPAPPLP----CLPPAAVCHALAGAGAPGGRLEL 425

Query: 97  SPAPGAGLTRG---------PLAPLGRRRHAPRWEPAAAGALLGP 132
             +PG  L RG         P APL      PRW P   G L GP
Sbjct: 426 GLSPGTRLIRGGGAAVPTAAPPAPL------PRWGP---GPLPGP 461



 Score = 35.0 bits (79), Expect = 0.054
 Identities = 41/123 (33%), Positives = 45/123 (36%), Gaps = 41/123 (33%)

Query: 44  PRRAGRGRRWGSLGTNGSLTGR------------GPGSPPLPPSAGPAPPPGLREAWVGG 91
           P  +G   R G  GTNG  T R            G G+    P + P PPP       GG
Sbjct: 305 PSESGSAGRRG--GTNGVATPREKLGGKRGVGRKGQGTRLGAPHSLPPPPPFRTGRGEGG 362

Query: 92  GGGRVSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDGAGRG 151
           GGG       A +T G   P  RRR   RWEP  A                  R GA  G
Sbjct: 363 GGG-----SRADVTAGRARP--RRR---RWEPLRA-----------------QRSGARPG 395

Query: 152 APA 154
           APA
Sbjct: 396 APA 398


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 64/214 (29%), Positives = 74/214 (34%), Gaps = 42/214 (19%)

Query: 41  RRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAW----------VG 90
           +R   +AG   R  +    G LT R PGSP  PP   PA    L  A            G
Sbjct: 4   KRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAG 63

Query: 91  GGGGRVSP--APGAGLTRGPLAPL-GRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDG 147
           G GG   P  AP AG TR    P  GR   AP  +  + G +  P  A      +R    
Sbjct: 64  GIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRA---SGTTRPGPL 120

Query: 148 AGRGAPASFEPRRGREKASE---MLAFFAWAR----WRTPVIPKCWDSRR---------- 190
             +G   S E    R KA+E     A  A AR      TP  P    +RR          
Sbjct: 121 GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGL 180

Query: 191 ---------EPPRRDPRPLSFKASFFSQVFPVPA 215
                     PP   PR     AS  S   P PA
Sbjct: 181 PRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPA 214



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 55  SLGTNGSLTGRG-PGSP-PLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGP 108
           S G    L  RG PG+P P PP+ GP    GL   +   G    +PAPGA L  GP
Sbjct: 633 SRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGA-LDPGP 687



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 42/163 (25%), Positives = 54/163 (33%), Gaps = 29/163 (17%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           GARR       G    ++       G   G P   PSA P PP       V       + 
Sbjct: 150 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT 209

Query: 99  APGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDG-AGRGAP-ASF 156
            P     R P A  G +R A R   ++A  L  P            R G + RG P A  
Sbjct: 210 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA-----------RSGPSARGTPRAPA 258

Query: 157 EPRRGREKASEMLAFFAWARWRTPVIPKCWDSRREPPRRDPRP 199
            P + + K  + L        R P +         PPR+D  P
Sbjct: 259 HPSQPKPKGLQAL--------RPPQV--------TPPRKDAAP 285


>gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo
           sapiens]
          Length = 492

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 40/105 (38%), Positives = 44/105 (41%), Gaps = 30/105 (28%)

Query: 41  RRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGG--GGR--V 96
           R RPRR    RRW  L    S    G  +PPLP      PP  +  A  G G  GGR  +
Sbjct: 374 RARPRR----RRWEPLRAQRSGARPGAPAPPLP----CLPPAAVCHALAGAGAPGGRLEL 425

Query: 97  SPAPGAGLTRG---------PLAPLGRRRHAPRWEPAAAGALLGP 132
             +PG  L RG         P APL      PRW P   G L GP
Sbjct: 426 GLSPGTRLIRGGGAAVPTAAPPAPL------PRWGP---GPLPGP 461



 Score = 35.0 bits (79), Expect = 0.054
 Identities = 41/123 (33%), Positives = 45/123 (36%), Gaps = 41/123 (33%)

Query: 44  PRRAGRGRRWGSLGTNGSLTGR------------GPGSPPLPPSAGPAPPPGLREAWVGG 91
           P  +G   R G  GTNG  T R            G G+    P + P PPP       GG
Sbjct: 305 PSESGSAGRRG--GTNGVATPREKLGGKRGVGRKGQGTRLGAPHSLPPPPPFRTGRGEGG 362

Query: 92  GGGRVSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDGAGRG 151
           GGG       A +T G   P  RRR   RWEP  A                  R GA  G
Sbjct: 363 GGG-----SRADVTAGRARP--RRR---RWEPLRA-----------------QRSGARPG 395

Query: 152 APA 154
           APA
Sbjct: 396 APA 398


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 46/155 (29%), Positives = 52/155 (33%), Gaps = 38/155 (24%)

Query: 46  RAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLT 105
           R G GR   S G   +  G  P  PP PP   P PPP               PAP  G  
Sbjct: 4   RGGGGRPGESPGATPA-PGPPPPPPPAPPQQQPPPPP--------------PPAPPPG-- 46

Query: 106 RGPLAPLGRRRHAPRWE--PAAAGALLGPMVALSQRDCSRDRDGAGRGAPASFEPRRGRE 163
            GP  P    +H PR E  P  A    GP   L  RD S  R G    A  +     G  
Sbjct: 47  PGPAPP----QHPPRAEALPPEAADEGGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGEC 102

Query: 164 KASEMLAFFAWARWRTPVIPKCWDSRREPPRRDPR 198
              E               P+C  +  E P R P+
Sbjct: 103 GRGE---------------PQCSPAGPEGPARGPK 122



 Score = 30.4 bits (67), Expect = 1.3
 Identities = 32/121 (26%), Positives = 39/121 (32%), Gaps = 8/121 (6%)

Query: 54  GSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPLA--- 110
           G L        R P   P P +A P PPP                +P  GL   PLA   
Sbjct: 748 GPLALGSPRLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPA 807

Query: 111 -PLGRRRHAPR----WEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPASFEPRRGREKA 165
            P  R   A R     +P+      GP  +      S  R G    A A+      R+ A
Sbjct: 808 LPARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPDRRDSA 867

Query: 166 S 166
           S
Sbjct: 868 S 868


>gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]
          Length = 832

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 60  GSLTGRGPGS-PPLPPSAGPAPPPGLREAWVGGGGGRVSPA---PGAGLTRGP 108
           G+  G GPG+ PP P +  PAPP G   A   GG G   PA     AG   GP
Sbjct: 15  GAGAGAGPGALPPQPAALPPAPPQGSPCAAAAGGSGACGPATAVAAAGTAEGP 67


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 42/120 (35%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 39   GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
            G R  P   G     G  G +G+   RGP  P  PP  G A PPG      G  G   SP
Sbjct: 968  GERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPP--GLAGPPG-ESGREGAPGAEGSP 1024

Query: 99   ----APGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPA 154
                +PGA   RG   P G     P   P A GA  GP+    +   S DR   G   PA
Sbjct: 1025 GRDGSPGAKGDRGETGPAG-----PPGAPGAPGA-PGPVGPAGK---SGDRGETGPAGPA 1075



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 30/82 (36%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 39   GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
            G    P   G   R GS G  G     GP  PP  P A  AP P +  A   G  G   P
Sbjct: 1013 GREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGP-VGPAGKSGDRGETGP 1071

Query: 99   APGAGL-----TRGPLAPLGRR 115
            A  AG       RGP  P G R
Sbjct: 1072 AGPAGPVGPVGARGPAGPQGPR 1093



 Score = 33.5 bits (75), Expect = 0.16
 Identities = 35/103 (33%), Positives = 37/103 (35%), Gaps = 17/103 (16%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLP------PSA----GPAPPPGLREAW 88
           GA  +P   G     G+ G  G     GP  PP P      P A    G A PPG     
Sbjct: 818 GADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPG--ATG 875

Query: 89  VGGGGGRVSPAPGAGLTRGPLAPLG----RRRHAPRWEPAAAG 127
             G  GRV P PG     GP  P G         PR E   AG
Sbjct: 876 FPGAAGRVGP-PGPSGNAGPPGPPGPAGKEGGKGPRGETGPAG 917



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 12/96 (12%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPP-SAGPAPPPGLREAWVGGGGGRVS 97
           GA   P  AG     G+ G +G    +GPG PP P  ++G    PG +    G  G +  
Sbjct: 398 GANGAPGIAGAPGFPGARGPSGP---QGPGGPPGPKGNSGEPGAPGSK----GDTGAKGE 450

Query: 98  PAPGAGLTRGPLAPLGRR-RHAPRWEPAAAGALLGP 132
           P P     +GP  P G   +   R EP   G L GP
Sbjct: 451 PGPVG--VQGPPGPAGEEGKRGARGEPGPTG-LPGP 483



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 17/79 (21%)

Query: 54  GSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPLAPLG 113
           G+ G  G    +G   PP P  AGPA PPG     +G  G     APGA   RG   P G
Sbjct: 824 GAKGEPGDAGAKGDAGPPGP--AGPAGPPGP----IGNVG-----APGAKGARGSAGPPG 872

Query: 114 RRRHAPRWEPAAAGALLGP 132
                    P AAG  +GP
Sbjct: 873 ATGF-----PGAAGR-VGP 885



 Score = 32.3 bits (72), Expect = 0.35
 Identities = 36/99 (36%), Positives = 39/99 (39%), Gaps = 8/99 (8%)

Query: 42  RRPRR-AGRGRRWGSLGTNGSLTGRGPGSPPLPPSAG----PAPPPGLREAWVGGGG--G 94
           R PR  AG   R G  G  G     GP  PP PP  G    P    G  E   GG    G
Sbjct: 120 RGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPG 179

Query: 95  RVSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPM 133
            + P+   GL   P AP  +    P  EP   GA  GPM
Sbjct: 180 PMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGA-SGPM 217



 Score = 32.3 bits (72), Expect = 0.35
 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 54  GSLGTNGSLTGRGPGSPPLPP-SAGPAPPPGLREAWVGGGGGRVSP----APGAGLTRGP 108
           G  G+ G    RG   PP P  +AGPA  PG  +   G  G   +P    APG    RGP
Sbjct: 359 GPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGA-DGQPGAKGANGAPGIAGAPGFPGARGP 417

Query: 109 LAPLG 113
             P G
Sbjct: 418 SGPQG 422



 Score = 31.6 bits (70), Expect = 0.59
 Identities = 36/108 (33%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPS----AGPAPPPGLR-EAWVGGGG 93
           G   RP  AG     G  G+ GS    G   PP P       GP  PPG R +A V G  
Sbjct: 524 GEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFP 583

Query: 94  GRVSPA--PGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQR 139
           G    A  PG    RG   P G    A +   A A    GP     +R
Sbjct: 584 GPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGER 631



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 31/101 (30%), Positives = 33/101 (32%), Gaps = 11/101 (10%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPP----------SAGPAPPPGLR-EA 87
           G R RP   G     G+ G  G+    GP  P  PP           AGP  P G     
Sbjct: 308 GERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQ 367

Query: 88  WVGGGGGRVSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAGA 128
            V G  G   PA  AG    P A            P  AGA
Sbjct: 368 GVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGA 408



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 32/118 (27%), Positives = 37/118 (31%), Gaps = 2/118 (1%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           GA   P   G     G+ G  GS     PG   +P   G A  PG +      G      
Sbjct: 698 GANGAPGNDGAKGDAGAPGAPGSQGA--PGLQGMPGERGAAGLPGPKGDRGDAGPKGADG 755

Query: 99  APGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPASF 156
           +PG    RG   P+G    A            GP      R    DR   G   PA F
Sbjct: 756 SPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGF 813



 Score = 29.3 bits (64), Expect = 3.0
 Identities = 31/89 (34%), Positives = 34/89 (38%), Gaps = 20/89 (22%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLR----EAWVGGGGG 94
           GA+  P  AG     G  G  GS     PG   LP   GPA PPG      E  V G  G
Sbjct: 617 GAQGPPGPAGPAGERGEQGPAGS-----PGFQGLP---GPAGPPGEAGKPGEQGVPGDLG 668

Query: 95  RVSPA--------PGAGLTRGPLAPLGRR 115
              P+        PG    +GP  P G R
Sbjct: 669 APGPSGARGERGFPGERGVQGPPGPAGPR 697


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 41/140 (29%), Positives = 47/140 (33%), Gaps = 19/140 (13%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           G R  P  AG     G  G  G   G+G   PP PP  G A  PGL +   G  GG  SP
Sbjct: 681 GERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPP--GAAGTPGL-QGMPGERGGLGSP 737

Query: 99  ----------------APGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCS 142
                            PG    RGP  P+G    A +      G   G       R   
Sbjct: 738 GPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSP 797

Query: 143 RDRDGAGRGAPASFEPRRGR 162
            +R   G   PA F    G+
Sbjct: 798 GERGETGPPGPAGFPGAPGQ 817



 Score = 36.2 bits (82), Expect = 0.024
 Identities = 42/148 (28%), Positives = 47/148 (31%), Gaps = 33/148 (22%)

Query: 39   GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPP-LPPSAGPAPPPGL-----------RE 86
            G R  P   G     G  G NG    RGP  P  LP  AG A  PG            R+
Sbjct: 966  GPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRD 1025

Query: 87   AWVGGGGGR-------VSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQR 139
               GG G R          APG     GP+ P G+        PA      GP       
Sbjct: 1026 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGP------- 1078

Query: 140  DCSRDRDGAGRGAPASFEPRRGREKASE 167
                      RGAP    PR  + +  E
Sbjct: 1079 -------AGSRGAPGPQGPRGDKGETGE 1099



 Score = 32.0 bits (71), Expect = 0.46
 Identities = 29/79 (36%), Positives = 32/79 (40%), Gaps = 10/79 (12%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRG----PGSPPLPPSAGPAPPPGLREAWVGGGGG 94
           G R  P  AG     G  G +G   G G    PGSP  P S G   PPG +     G  G
Sbjct: 507 GERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQ-----GESG 561

Query: 95  RVSPAPGAGLTRGPLAPLG 113
           R  P PG    RG    +G
Sbjct: 562 RPGP-PGPSGPRGQPGVMG 579



 Score = 32.0 bits (71), Expect = 0.46
 Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 17/126 (13%)

Query: 44  PRRAGRGRRWGSLGTNGSLTGRGPGSPP----LPPSAGPAPPPGLR-----EAWVGGGGG 94
           P   G+    G  G  G+   +G G PP     P  +GPA PPG +         GG G 
Sbjct: 812 PGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGA 871

Query: 95  RVSPA-------PGAGLTRGPLAPLGR-RRHAPRWEPAAAGALLGPMVALSQRDCSRDRD 146
              P        PG+    GP  P G   +  P       GA   P V+  + D  +  +
Sbjct: 872 AGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGE 931

Query: 147 GAGRGA 152
               GA
Sbjct: 932 KGSPGA 937



 Score = 32.0 bits (71), Expect = 0.46
 Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 44   PRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPS-------AGPAPPPGLREAWVGGGGGRV 96
            P   G   + G++G+ G    RGP  P  PP         GP  PPG R    G  G R 
Sbjct: 1118 PGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPR----GNRGERG 1173

Query: 97   SP-APGAGLTRGPLAPLG 113
            S  +PG     GP  P G
Sbjct: 1174 SEGSPGHPGQPGPPGPPG 1191



 Score = 31.6 bits (70), Expect = 0.59
 Identities = 44/157 (28%), Positives = 51/157 (32%), Gaps = 34/157 (21%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPP----------------SAGPAPPP 82
           G R  P   GR    G+ G  G+   RG    P PP                  GPA  P
Sbjct: 300 GPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSP 359

Query: 83  GLREAWVGGGGGRVSPAP-GAGLTRGPL-------APLGRRRHAPRWEPAAAGAL--LGP 132
           G      G  G R  P P G    +GP        +P G+    P   P A G +   GP
Sbjct: 360 GSN----GAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGP 415

Query: 133 MVALSQRDCSRDRDGAG----RGAPASFEPRRGREKA 165
                       R GAG     GA     PR  R +A
Sbjct: 416 PGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEA 452



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 28/85 (32%), Positives = 32/85 (37%), Gaps = 12/85 (14%)

Query: 54  GSLGTNGSLTGRGPGSPPLPP----SAGPAPPPGLREAWVGGGGGRVSPAPGAGL----- 104
           G+ G NG   G G   P  PP      GP  PPG      GG  G   P    GL     
Sbjct: 588 GAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPG--PTGPGGDKGDTGPPGPQGLQGLPG 645

Query: 105 TRGPLAPLGR-RRHAPRWEPAAAGA 128
           T GP    G+     P+ +  A GA
Sbjct: 646 TGGPPGENGKPGEPGPKGDAGAPGA 670



 Score = 29.6 bits (65), Expect = 2.3
 Identities = 24/72 (33%), Positives = 26/72 (36%), Gaps = 5/72 (6%)

Query: 44   PRRAGRGRRWGSLGTNGSLTGRGP----GSPPLPPSAGPAPPPGLREAWVGGGGGRVSPA 99
            P + G     G +G  G    RG     GSP  P   GP  PPG      GG G      
Sbjct: 1148 PGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAG 1207

Query: 100  PGAGLTRGPLAP 111
             G G   G  AP
Sbjct: 1208 IG-GEKAGGFAP 1218



 Score = 28.1 bits (61), Expect = 6.6
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 39   GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
            G+R  P   G     G  G  G+   +G    P  P A  +P P  ++  +G        
Sbjct: 1080 GSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIG-------- 1131

Query: 99   APGAGLTRGPLAPLG 113
            +PG    RGP+ P G
Sbjct: 1132 SPGPAGPRGPVGPSG 1146


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 53/180 (29%), Positives = 62/180 (34%), Gaps = 25/180 (13%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           G    P  A R     S GT+     R P S P     G   PP    +     G   SP
Sbjct: 66  GGATIPESAPRAGPTRSAGTSS----RNPASRPPASGRGERAPPAKNTS----PGPVSSP 117

Query: 99  APGAGLTR-GPLAPLGRRRHAPRWEPAAAG-ALLGPMVALSQRDCSRDRDGAGRGAPASF 156
              +G TR GPL   G R  A   E  A G A   P  +       RD  G   G P+  
Sbjct: 118 GRASGTTRPGPLGQKGLRISAE--ETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 175

Query: 157 EPRRGREKASEMLAFFAWARWRTPVIPKCWDSRR-EPPRRDPRPLSFKASFFSQVFPVPA 215
             RR R   +E+             +P+   S R  PP   PR     AS  S   P PA
Sbjct: 176 MARRSRAAGTEV------------GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPA 223



 Score = 37.4 bits (85), Expect = 0.011
 Identities = 28/79 (35%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 41  RRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAP 100
           +R   +AG   R  +    G LT R PGSP  PP   P  P  LR     G  GR   A 
Sbjct: 4   KRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPP---PVTPAALRVLGAAGAVGRKPLAE 60

Query: 101 GAGLTRGPLAPLGRRRHAP 119
            AG   G   P    R  P
Sbjct: 61  RAGGIGGATIPESAPRAGP 79



 Score = 33.1 bits (74), Expect = 0.20
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 55  SLGTNGSLTGRG-PGSP-PLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGP 108
           S G    L  RG PG+P P PP+ GP    GL   +   G    +PAPGA L  GP
Sbjct: 941 SRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGA-LDPGP 995



 Score = 31.6 bits (70), Expect = 0.59
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 12/62 (19%)

Query: 67  PGSPPLPPSAGPAP--PPGLREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRHAPRWEPA 124
           P SPP+ PSA P P  PP L    +     +V P+P A L   PLA     +  P+  PA
Sbjct: 742 PASPPMSPSATPPPRVPPLLAAPPL-----QVPPSPPASLPMSPLA-----KPPPQAPPA 791

Query: 125 AA 126
            A
Sbjct: 792 LA 793



 Score = 30.0 bits (66), Expect = 1.7
 Identities = 42/163 (25%), Positives = 54/163 (33%), Gaps = 29/163 (17%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSP 98
           GARR       G    ++       G   G P   PSA P PP       V       + 
Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT 218

Query: 99  APGAGLTRGPLAPLGRRRHAPRWEPAAAGALLGPMVALSQRDCSRDRDG-AGRGAP-ASF 156
            P     R P A  G +R A R   ++A  L  P            R G + RG P A  
Sbjct: 219 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA-----------RSGPSARGTPRAPA 267

Query: 157 EPRRGREKASEMLAFFAWARWRTPVIPKCWDSRREPPRRDPRP 199
            P + + K  + L        R P +         PPR+D  P
Sbjct: 268 HPSQPKPKGLQAL--------RPPQV--------TPPRKDAAP 294


>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 251

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 30/93 (32%), Positives = 35/93 (37%), Gaps = 16/93 (17%)

Query: 41  RRRPRR------AGRGRRWGSLGTNGSLTGRGPGSPPLPPSAGPAPPPGLREAWVGGGGG 94
           R+RP +       G+GR   S    G+ T   P   P PP   P P PG  +        
Sbjct: 3   RKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQ-------- 54

Query: 95  RVSPAPGAGLTRGPLAPLGRRRHAPRWEPAAAG 127
             SP P AG    P A     R A R E  A G
Sbjct: 55  --SPVPAAGAVPSPPAAAHPARPALRGETPAPG 85



 Score = 34.7 bits (78), Expect = 0.070
 Identities = 37/123 (30%), Positives = 44/123 (35%), Gaps = 28/123 (22%)

Query: 43  RPRRAGRGRRWGSLGTNGSLTGR-GPGSPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPG 101
           RP  + R  R G +G      GR G G PP P    P  PPG R  W+      ++  P 
Sbjct: 101 RPPLSHRPLRGGGMGR-----GRPGKGPPPNPSRRLPPAPPGGRRTWLSA----LATGPA 151

Query: 102 AGLTRGPLAPLGRRRHAP-----------RWEPAAAGALLGPMVALSQRDCSRDRDGAGR 150
           AG         GRRR +P           R E    G  L     LS +  S  R G   
Sbjct: 152 AG-------GAGRRRRSPPVFRAADWGFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQA 204

Query: 151 GAP 153
             P
Sbjct: 205 WGP 207


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 41/175 (23%)

Query: 22  KNQEPQPRLTLHCNRRWGARRRPRRAG-RGR-RWGSLGTNGSLTGRGPGSPPLPPSAGPA 79
           + +  + R +    RR G RRRPR A  RG  R  S   + S +G G G+P      GP 
Sbjct: 390 RRRRRRSRSSASAPRRRG-RRRPRPAPPRGSSRSLSRARSSSDSGSGRGAP------GPG 442

Query: 80  PPPGLREAWVGGGGGRV------------SPAPGAGLTRGPLAPLGRRR-HAPRWEPAAA 126
           P PG  E   GG G R             SP+PGA   RG   P G+    +P   P + 
Sbjct: 443 PEPG-SERGHGGHGKRAKERPPRARPASTSPSPGAHGRRG--GPEGKSSSRSPGPHPRSW 499

Query: 127 GALLGPMVALSQ----------------RDCSRDRDGAGRGAPASFEPRRGREKA 165
            +   P  + S+                +  SRD+DG GR   +  E  R R ++
Sbjct: 500 SSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRS 554



 Score = 35.8 bits (81), Expect = 0.032
 Identities = 49/167 (29%), Positives = 61/167 (36%), Gaps = 45/167 (26%)

Query: 35  NRRWGARRRPRRAGRGRRWGSLGTNGSLTGRG------PGSPPLPPSAGPAPPPGLRE-- 86
           ++R    R P  +G G  WGS   NG    R       PGS   PP    +P P +R+  
Sbjct: 291 SQRSSGSRSPSPSG-GSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKA 349

Query: 87  ---AWVGGGGGRVSPAP---------------GAGLTR-----------GPLAPLGRRRH 117
              A      G+ SP+P               GAG  R              AP  R R 
Sbjct: 350 AAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRR 409

Query: 118 APRWEPAAAGALLGPMVALSQRDCSRDRDGAGRGAPASFEPRRGREK 164
            PR  P       G   +LS+   S D  G+GRGAP    P  G E+
Sbjct: 410 RPRPAPPR-----GSSRSLSRARSSSD-SGSGRGAPGP-GPEPGSER 449


>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 268

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 32/87 (36%), Positives = 34/87 (39%), Gaps = 16/87 (18%)

Query: 39  GARRRPRRAGRGRRWGSLGTNGSLTGRG-----PGSPPLPPSAGPAPPPGLREAWVGGGG 93
           GA  RPRR    RR   +G  G    RG     PG     P  G  P PG R        
Sbjct: 87  GAAPRPRRQRLRRRRAKVGGWGCARARGLDRRAPGEGGRSPGGGLEPSPGAR-------- 138

Query: 94  GRVSPAPGAGLTRGPLAPLGRRRHAPR 120
           G V  AP A   R    P GR R AP+
Sbjct: 139 GAVGAAPAAARHR---KPRGRSRRAPQ 162


>gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 303

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 40/122 (32%), Positives = 46/122 (37%), Gaps = 12/122 (9%)

Query: 66  GPG----SPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPLA-PLGRRRHAPR 120
           GPG    + P PP++   P PG R    G   G  S AP    T    A   G  R AP+
Sbjct: 99  GPGQVAAAAPAPPASWAPPQPGRRPTCPGCCRGAASGAPRWVRTWAAAAVAAGPGRSAPQ 158

Query: 121 WEPAAAGAL--LGPMVALSQR----DCSRDRDGAGRGAPASFEPRRGREKASEMLAFFAW 174
            EP AA A    GP  A         C+ D  G  R   A+     G        A  AW
Sbjct: 159 REPRAAWAACPAGPSSAAGPERGHVSCAADEPGTERSGAAAARGSAGASSRGRG-ALGAW 217

Query: 175 AR 176
           AR
Sbjct: 218 AR 219


>gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo
           sapiens]
          Length = 303

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 40/122 (32%), Positives = 46/122 (37%), Gaps = 12/122 (9%)

Query: 66  GPG----SPPLPPSAGPAPPPGLREAWVGGGGGRVSPAPGAGLTRGPLA-PLGRRRHAPR 120
           GPG    + P PP++   P PG R    G   G  S AP    T    A   G  R AP+
Sbjct: 99  GPGQVAAAAPAPPASWAPPQPGRRPTCPGCCRGAASGAPRWVRTWAAAAVAAGPGRSAPQ 158

Query: 121 WEPAAAGAL--LGPMVALSQR----DCSRDRDGAGRGAPASFEPRRGREKASEMLAFFAW 174
            EP AA A    GP  A         C+ D  G  R   A+     G        A  AW
Sbjct: 159 REPRAAWAACPAGPSSAAGPERGHVSCAADEPGTERSGAAAARGSAGASSRGRG-ALGAW 217

Query: 175 AR 176
           AR
Sbjct: 218 AR 219


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.140    0.480 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,758,092
Number of Sequences: 37866
Number of extensions: 876811
Number of successful extensions: 11312
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 890
Number of HSP's that attempted gapping in prelim test: 7413
Number of HSP's gapped (non-prelim): 3941
length of query: 230
length of database: 18,247,518
effective HSP length: 99
effective length of query: 131
effective length of database: 14,498,784
effective search space: 1899340704
effective search space used: 1899340704
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.