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Search of human proteins with 239744898
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744898 PREDICTED: hypothetical protein XP_002343297 [Homo
sapiens]
(210 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744898 PREDICTED: hypothetical protein XP_002343297 [Homo ... 439 e-124
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 43 2e-04
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 43 2e-04
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 43 2e-04
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 42 5e-04
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.001
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 40 0.002
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 40 0.002
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 39 0.002
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 39 0.002
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 39 0.002
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo sapi... 39 0.004
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 39 0.004
gi|4885323 G protein-coupled receptor 37 [Homo sapiens] 38 0.007
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 38 0.007
gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens] 38 0.007
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 38 0.007
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 38 0.007
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
>gi|239744898 PREDICTED: hypothetical protein XP_002343297 [Homo
sapiens]
Length = 210
Score = 439 bits (1130), Expect = e-124
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MSRAGSHPKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPK 60
MSRAGSHPKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPK
Sbjct: 1 MSRAGSHPKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPK 60
Query: 61 PREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIAL 120
PREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIAL
Sbjct: 61 PREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIAL 120
Query: 121 AAPAARGLRVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPARFP 180
AAPAARGLRVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPARFP
Sbjct: 121 AAPAARGLRVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPARFP 180
Query: 181 LQPGDSRERSRNHRALELTWQPRGAKAGGA 210
LQPGDSRERSRNHRALELTWQPRGAKAGGA
Sbjct: 181 LQPGDSRERSRNHRALELTWQPRGAKAGGA 210
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 43.1 bits (100), Expect = 2e-04
Identities = 47/132 (35%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Query: 57 RSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRF 116
R P+PR + R S P GP SR R+ RAR RG GP
Sbjct: 148 RVPRPRLPSQRRGASCGLGP----GPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHH 203
Query: 117 FIALAA---PAARGLRVSSQGPG-LWRGPAARKEG--VARVGVAAGLRLRPRGRGRKTTP 170
A A P RG R + G G RGPA G VA A L L P GR R +P
Sbjct: 204 TGARQAGPLPGTRG-RTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSP 262
Query: 171 --ALSGHPARFP 180
+L+ P RFP
Sbjct: 263 RSSLARPPLRFP 274
Score = 32.3 bits (72), Expect = 0.30
Identities = 58/225 (25%), Positives = 77/225 (34%), Gaps = 53/225 (23%)
Query: 8 PKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPW------PPIRRERPGLRSPKP 61
P+P +P + G C GPES R+ RR R P+P
Sbjct: 150 PRPRLPSQ----------RRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEP 199
Query: 62 ------REEAGPRADSKAASPALFMGPGSRGRRR-------------------PPSWARR 96
+AGP ++ + A G +RG R PP R
Sbjct: 200 GPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPG--RS 257
Query: 97 RARGGRGSCPEPHVRAGPRFFIALAAPAARGLRVS---SQGPGLWRGPAARKEGVARVGV 153
R R S P +R P AL+ A R RV+ S P A + +R
Sbjct: 258 RLFSPRSSLARPPLRFPPAR-PALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPR- 315
Query: 154 AAGLRLRPRGRGRKTTPALSGHPARFPLQPGDSRERSRNHRALEL 198
A+GLR R R P L PA +PL P R + H E+
Sbjct: 316 ASGLRARAARR-----PGLDPGPAPYPLTPAALRPGTSPHPGREV 355
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 43.1 bits (100), Expect = 2e-04
Identities = 47/132 (35%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Query: 57 RSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRF 116
R P+PR + R S P GP SR R+ RAR RG GP
Sbjct: 148 RVPRPRLPSQRRGASCGLGP----GPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHH 203
Query: 117 FIALAA---PAARGLRVSSQGPG-LWRGPAARKEG--VARVGVAAGLRLRPRGRGRKTTP 170
A A P RG R + G G RGPA G VA A L L P GR R +P
Sbjct: 204 TGARQAGPLPGTRG-RTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSP 262
Query: 171 --ALSGHPARFP 180
+L+ P RFP
Sbjct: 263 RSSLARPPLRFP 274
Score = 32.3 bits (72), Expect = 0.30
Identities = 58/225 (25%), Positives = 77/225 (34%), Gaps = 53/225 (23%)
Query: 8 PKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPW------PPIRRERPGLRSPKP 61
P+P +P + G C GPES R+ RR R P+P
Sbjct: 150 PRPRLPSQ----------RRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEP 199
Query: 62 ------REEAGPRADSKAASPALFMGPGSRGRRR-------------------PPSWARR 96
+AGP ++ + A G +RG R PP R
Sbjct: 200 GPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPG--RS 257
Query: 97 RARGGRGSCPEPHVRAGPRFFIALAAPAARGLRVS---SQGPGLWRGPAARKEGVARVGV 153
R R S P +R P AL+ A R RV+ S P A + +R
Sbjct: 258 RLFSPRSSLARPPLRFPPAR-PALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPR- 315
Query: 154 AAGLRLRPRGRGRKTTPALSGHPARFPLQPGDSRERSRNHRALEL 198
A+GLR R R P L PA +PL P R + H E+
Sbjct: 316 ASGLRARAARR-----PGLDPGPAPYPLTPAALRPGTSPHPGREV 355
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 43.1 bits (100), Expect = 2e-04
Identities = 47/132 (35%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Query: 57 RSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRF 116
R P+PR + R S P GP SR R+ RAR RG GP
Sbjct: 148 RVPRPRLPSQRRGASCGLGP----GPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHH 203
Query: 117 FIALAA---PAARGLRVSSQGPG-LWRGPAARKEG--VARVGVAAGLRLRPRGRGRKTTP 170
A A P RG R + G G RGPA G VA A L L P GR R +P
Sbjct: 204 TGARQAGPLPGTRG-RTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSP 262
Query: 171 --ALSGHPARFP 180
+L+ P RFP
Sbjct: 263 RSSLARPPLRFP 274
Score = 32.3 bits (72), Expect = 0.30
Identities = 58/225 (25%), Positives = 77/225 (34%), Gaps = 53/225 (23%)
Query: 8 PKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPW------PPIRRERPGLRSPKP 61
P+P +P + G C GPES R+ RR R P+P
Sbjct: 150 PRPRLPSQ----------RRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEP 199
Query: 62 ------REEAGPRADSKAASPALFMGPGSRGRRR-------------------PPSWARR 96
+AGP ++ + A G +RG R PP R
Sbjct: 200 GPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPG--RS 257
Query: 97 RARGGRGSCPEPHVRAGPRFFIALAAPAARGLRVS---SQGPGLWRGPAARKEGVARVGV 153
R R S P +R P AL+ A R RV+ S P A + +R
Sbjct: 258 RLFSPRSSLARPPLRFPPAR-PALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPR- 315
Query: 154 AAGLRLRPRGRGRKTTPALSGHPARFPLQPGDSRERSRNHRALEL 198
A+GLR R R P L PA +PL P R + H E+
Sbjct: 316 ASGLRARAARR-----PGLDPGPAPYPLTPAALRPGTSPHPGREV 355
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 42.4 bits (98), Expect = 3e-04
Identities = 73/266 (27%), Positives = 92/266 (34%), Gaps = 74/266 (27%)
Query: 2 SRAGSHPKPAI---PGRGGEKLALLLAMLGGRCCPAGGPE-----------SHTPRKPWP 47
S AG P A P R L +G P+ GP H R+P P
Sbjct: 123 SSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLP 182
Query: 48 PIRRERPGLRSPKPREEAGPRADSKAASPALF---------MGPGSRGRRRPPSWAR--- 95
+P L S P A P A S+A S + F P G P S +R
Sbjct: 183 KPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGE 242
Query: 96 ------------RRARGGRGSCP--EPHVRAGPRFFIALAAP-------AARGLRVSSQG 134
RR RG R C P + AGP AAP AAR R G
Sbjct: 243 VVGARRRRGGEERRVRGRRQGCALGSPPIPAGP------AAPGRAGERRAARQWRKRGGG 296
Query: 135 PGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKT----TPAL--SGHPARFPLQPG---- 184
PG+ + +EG GV G + PR RG T +PA G P R G
Sbjct: 297 PGV-----SPREGAQGEGVRGG--VTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLS 349
Query: 185 ----DSRERSRNHRALELTWQPRGAK 206
++ E H A T++P ++
Sbjct: 350 APSAEAEEVPGGHTASNPTYEPLSSR 375
Score = 32.7 bits (73), Expect = 0.23
Identities = 54/188 (28%), Positives = 65/188 (34%), Gaps = 27/188 (14%)
Query: 8 PKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPI--RRERPGLRSPKPREEA 65
P P P G ++A G P S T R P PPI +RP R+ + E A
Sbjct: 9 PHPRTPAPGCPEVA---PQPEGTDAPGPAVCSPTARAP-PPILPAPQRPPTRA-REWEGA 63
Query: 66 GPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPAA 125
A + AL PGSR R P R + G P P AP A
Sbjct: 64 AWAAGATGVGAALLALPGSRRLGRVPLTFREASPG-----PAP------------GAPRA 106
Query: 126 RGLRVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPARFPLQPGD 185
RG GP R P++ + A AA R R R P G R + P
Sbjct: 107 RGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLAR---CLPRSVGSCVRPSVGPSL 163
Query: 186 SRERSRNH 193
R R H
Sbjct: 164 PRRHCRRH 171
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 42.0 bits (97), Expect = 4e-04
Identities = 45/155 (29%), Positives = 61/155 (39%), Gaps = 44/155 (28%)
Query: 39 SHTPRKP--WPPIRRERPGLRSPKPREEAG---------PRADSKAASPALFMGPGSRGR 87
SH+ P W P+R SP+P G PRAD+ +S GP S+ R
Sbjct: 265 SHSAPLPFFWSPLRNP-----SPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHR 319
Query: 88 RRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEG 147
P A P + A AP A S +GPG +GP +R++
Sbjct: 320 TLPAPPA-------------------PTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRDE 360
Query: 148 VARVGVAA------GLRLRPRGR---GRKTTPALS 173
RV +AA G L P G GR+ +P+ S
Sbjct: 361 PRRVVIAARECGREGSELPPSGEETPGRRKSPSQS 395
Score = 29.6 bits (65), Expect = 1.9
Identities = 41/163 (25%), Positives = 53/163 (32%), Gaps = 20/163 (12%)
Query: 47 PPIRRERPGLRSP--------KPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRA 98
P +R LR P KPR GP A SP G + R W R +
Sbjct: 33 PTLRHSASALRPPRLSRGKDLKPRCGRGP-----AHSPDPGEGCEAWRRLSADRWPRPAS 87
Query: 99 RGGR-------GSCPEPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEGVARV 151
R G P+P +A ++ P RG SQ PG G AR +G+ V
Sbjct: 88 LSPRAALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACARAKGIRLV 147
Query: 152 GVAAGLRLRPRGRGRKTTPALSGHPARFPLQPGDSRERSRNHR 194
+ P T L+ PG + R R
Sbjct: 148 NPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAER 190
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 42.0 bits (97), Expect = 4e-04
Identities = 58/191 (30%), Positives = 70/191 (36%), Gaps = 28/191 (14%)
Query: 35 GGPESHTPRKPWPPIRR-----ERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGRRR 89
G P S P +P PP R RP RSP+P GP LF G + RR
Sbjct: 169 GDPFSPAPPRPQPPSRPAAQPPSRPAFRSPRP--VRGPHPRRAVVVAVLF---GVQAPRR 223
Query: 90 PPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPA-----ARGLRVSSQGP-GLWRGPAA 143
+ R G R R G + AA RG +GP G+ R A
Sbjct: 224 DVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVA 283
Query: 144 RKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPARFPLQPG----DSRERSRNHRALELT 199
+++ +ARV V R P R T PA FPLQ G S R H L
Sbjct: 284 QRQRLARVCV----RSLPGNRRLATRSC----PAAFPLQGGATLPSSLPAPRLHLGSLLP 335
Query: 200 WQPRGAKAGGA 210
GA+ G A
Sbjct: 336 SSSGGARLGDA 346
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 42.0 bits (97), Expect = 4e-04
Identities = 45/155 (29%), Positives = 61/155 (39%), Gaps = 44/155 (28%)
Query: 39 SHTPRKP--WPPIRRERPGLRSPKPREEAG---------PRADSKAASPALFMGPGSRGR 87
SH+ P W P+R SP+P G PRAD+ +S GP S+ R
Sbjct: 265 SHSAPLPFFWSPLRNP-----SPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHR 319
Query: 88 RRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEG 147
P A P + A AP A S +GPG +GP +R++
Sbjct: 320 TLPAPPA-------------------PTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRDE 360
Query: 148 VARVGVAA------GLRLRPRGR---GRKTTPALS 173
RV +AA G L P G GR+ +P+ S
Sbjct: 361 PRRVVIAARECGREGSELPPSGEETPGRRKSPSQS 395
Score = 29.6 bits (65), Expect = 1.9
Identities = 41/163 (25%), Positives = 53/163 (32%), Gaps = 20/163 (12%)
Query: 47 PPIRRERPGLRSP--------KPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRA 98
P +R LR P KPR GP A SP G + R W R +
Sbjct: 33 PTLRHSASALRPPRLSRGKDLKPRCGRGP-----AHSPDPGEGCEAWRRLSADRWPRPAS 87
Query: 99 RGGR-------GSCPEPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEGVARV 151
R G P+P +A ++ P RG SQ PG G AR +G+ V
Sbjct: 88 LSPRAALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACARAKGIRLV 147
Query: 152 GVAAGLRLRPRGRGRKTTPALSGHPARFPLQPGDSRERSRNHR 194
+ P T L+ PG + R R
Sbjct: 148 NPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAER 190
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 42.0 bits (97), Expect = 4e-04
Identities = 45/155 (29%), Positives = 61/155 (39%), Gaps = 44/155 (28%)
Query: 39 SHTPRKP--WPPIRRERPGLRSPKPREEAG---------PRADSKAASPALFMGPGSRGR 87
SH+ P W P+R SP+P G PRAD+ +S GP S+ R
Sbjct: 265 SHSAPLPFFWSPLRNP-----SPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHR 319
Query: 88 RRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEG 147
P A P + A AP A S +GPG +GP +R++
Sbjct: 320 TLPAPPA-------------------PTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRDE 360
Query: 148 VARVGVAA------GLRLRPRGR---GRKTTPALS 173
RV +AA G L P G GR+ +P+ S
Sbjct: 361 PRRVVIAARECGREGSELPPSGEETPGRRKSPSQS 395
Score = 29.6 bits (65), Expect = 1.9
Identities = 41/163 (25%), Positives = 53/163 (32%), Gaps = 20/163 (12%)
Query: 47 PPIRRERPGLRSP--------KPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRA 98
P +R LR P KPR GP A SP G + R W R +
Sbjct: 33 PTLRHSASALRPPRLSRGKDLKPRCGRGP-----AHSPDPGEGCEAWRRLSADRWPRPAS 87
Query: 99 RGGR-------GSCPEPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEGVARV 151
R G P+P +A ++ P RG SQ PG G AR +G+ V
Sbjct: 88 LSPRAALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACARAKGIRLV 147
Query: 152 GVAAGLRLRPRGRGRKTTPALSGHPARFPLQPGDSRERSRNHR 194
+ P T L+ PG + R R
Sbjct: 148 NPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAER 190
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 41.6 bits (96), Expect = 5e-04
Identities = 58/172 (33%), Positives = 66/172 (38%), Gaps = 42/172 (24%)
Query: 30 RCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGRRR 89
R GP P + P +R P R G R A +PA G R
Sbjct: 52 RAAARPGPLGRPPTRAGPA---QRSSCTQPHRRRRRGTRRLPPALTPA-----GPYHSAR 103
Query: 90 PPSWARRRARGGRGSCPEPHVRAG--PRFFIALAAPAAR------GLRVSSQG------- 134
P AR AR R S P P R+G P AP AR GLR+S+ G
Sbjct: 104 PGGGAR--ARAARVSPPTPP-RSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLR 160
Query: 135 ---PGLWRGP--------AARKEGVARVGVAAGLRLRPRGRG----RKTTPA 171
G W+ P A R G ARV G RLRPRGRG R+T PA
Sbjct: 161 RAASGEWKRPGGLTQGEFAGRGAGGARVTHRPG-RLRPRGRGRGRARRTCPA 211
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 41.6 bits (96), Expect = 5e-04
Identities = 58/172 (33%), Positives = 66/172 (38%), Gaps = 42/172 (24%)
Query: 30 RCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGRRR 89
R GP P + P +R P R G R A +PA G R
Sbjct: 52 RAAARPGPLGRPPTRAGPA---QRSSCTQPHRRRRRGTRRLPPALTPA-----GPYHSAR 103
Query: 90 PPSWARRRARGGRGSCPEPHVRAG--PRFFIALAAPAAR------GLRVSSQG------- 134
P AR AR R S P P R+G P AP AR GLR+S+ G
Sbjct: 104 PGGGAR--ARAARVSPPTPP-RSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLR 160
Query: 135 ---PGLWRGP--------AARKEGVARVGVAAGLRLRPRGRG----RKTTPA 171
G W+ P A R G ARV G RLRPRGRG R+T PA
Sbjct: 161 RAASGEWKRPGGLTQGEFAGRGAGGARVTHRPG-RLRPRGRGRGRARRTCPA 211
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 40.4 bits (93), Expect = 0.001
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 10/156 (6%)
Query: 37 PESHTPRKPWPPIRRERP-GLRSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWAR 95
P PR+ +P G S KPR GP+A +K+ G G + RRR +
Sbjct: 402 PRWQNPRRRAQKAPAAKPRGGGSKKPRRR-GPKA-AKSRGGKSRSGGGKKPRRRGQKARQ 459
Query: 96 RRARGGRGSCPEPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEGVARVGVAA 155
+ A G S + + G + A + G S G LWR + E AA
Sbjct: 460 KAAEAGAESRGDK--KQGRQKASAAGTKSRGGGLKSHSGKNLWRR-GQKAEAAGEKATAA 516
Query: 156 GLRLRPRGRGRKTTPALSGHPARFPLQPGDSRERSR 191
G + R R + R+ PA++G +R G S+ R R
Sbjct: 517 GAKSRGRKQPRRQKPAVAGAKSRV----GGSKSRQR 548
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.0 bits (92), Expect = 0.001
Identities = 50/162 (30%), Positives = 65/162 (40%), Gaps = 22/162 (13%)
Query: 48 PIRRERPGLRSP---KPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGS 104
P RR R R+P + R R S++ +PA RGR R + ARRR+R
Sbjct: 578 PARRGRSRSRTPARRRSRSRTPTRRRSRSRTPA------RRGRSRSRTPARRRSR----- 626
Query: 105 CPEPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGR 164
R+ R +PA R R S+ P RG + + R + R GR
Sbjct: 627 -----TRSPVRRRSRSRSPARRSGRSRSRTPAR-RGRSRSRTPARRGRSRSRTPARRSGR 680
Query: 165 GRKTTPALSGHPARFPLQPGDSRERS--RNHRALELTWQPRG 204
R TPA G + G SR RS R R+ T Q RG
Sbjct: 681 SRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRG 722
Score = 37.7 bits (86), Expect = 0.007
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 2 SRAGSHPKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKP 61
S + S P PA PG L + P G S +PRKP +R R SP
Sbjct: 2643 SSSSSSPSPAKPGPQA-----LPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVE 2697
Query: 62 REEAGPR---ADSKAASPALFMGPGSRGRRRPPSWARRR 97
R P+ D +++S G RG R PS RRR
Sbjct: 2698 RRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRR 2736
Score = 32.7 bits (73), Expect = 0.23
Identities = 49/194 (25%), Positives = 65/194 (33%), Gaps = 44/194 (22%)
Query: 43 RKPWPPIRRERPGLRSPKPREEA-----------------GPRADSKAASPALFMGPGSR 85
R PP R P + SP+P E++ R S + P SR
Sbjct: 1717 RSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSR 1776
Query: 86 GRRRPPSWARRRARGG------------RGSCPEPHVRAGPRFFIALAAPAARGLRVSSQ 133
RR RRR R G R R G + + + R SS+
Sbjct: 1777 SRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSR 1836
Query: 134 GPGLWRG-----PAARKEGVARVGVAAGLRLRPRG------RGRKTTPALSGHPARFPLQ 182
RG P +RK +R A R R R R R TP +S +R
Sbjct: 1837 RR---RGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTS 1893
Query: 183 PGDSRERSRNHRAL 196
P SR RSR+ ++
Sbjct: 1894 P-VSRRRSRSRTSV 1906
Score = 32.0 bits (71), Expect = 0.39
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 24/133 (18%)
Query: 2 SRAGSHPKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKP 61
SR+ S P+ + +L+L ++ G CP +K P RR R G PK
Sbjct: 759 SRSLSSPR----SKAKSRLSLRRSLSGSSPCPK--------QKSQTPPRRSRSGSSQPKA 806
Query: 62 REEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAG-PRFFIAL 120
+ PR ++SP + + + PS + S P P V++G P ++
Sbjct: 807 KSRTPPRRSRSSSSPP------PKQKSKTPS-----RQSHSSSSPHPKVKSGTPPRQGSI 855
Query: 121 AAPAARGLRVSSQ 133
+P A V+ Q
Sbjct: 856 TSPQANEQSVTPQ 868
Score = 30.8 bits (68), Expect = 0.87
Identities = 40/177 (22%), Positives = 60/177 (33%), Gaps = 15/177 (8%)
Query: 33 PAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPS 92
P+ P+ + P + + + R + P DSK+ GS +
Sbjct: 1549 PSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKP 1608
Query: 93 WARRRARGGRGSCPEPHVRAGPRFFIALAAPAARGL--RVSSQGPGLWRGPAARKEGVAR 150
A RA+ G S PEP APA R L R S RGP+
Sbjct: 1609 RAAPRAQSGSDSSPEP------------KAPAPRALPRRSRSGSSSKGRGPSPEGSSSTE 1656
Query: 151 VGVAAGLRLRPRGRGRKTTPALSGHPARFPLQPGDSRERSRNHRALELTWQPRGAKA 207
+ R RG +++P +R P + SR R L+ + R A +
Sbjct: 1657 SSPEHPPKSRTARRGSRSSPE-PKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASS 1712
Score = 30.8 bits (68), Expect = 0.87
Identities = 49/190 (25%), Positives = 66/190 (34%), Gaps = 20/190 (10%)
Query: 3 RAGSHPKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKPR 62
R+ S P R + ++ R P S R PP+ R R R+P R
Sbjct: 1887 RSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRS---RSRTPPVTRRRSRSRTPTTR 1943
Query: 63 EEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAA 122
S++ +P + R R R P RRR+R S P R R + +
Sbjct: 1944 RR------SRSRTPPV---TRRRSRSRTPPVTRRRSR----SRTSPITRRRSR---SRTS 1987
Query: 123 PAARGLRVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPARFPLQ 182
P R S P R +R V R + R R R TP L +R
Sbjct: 1988 PVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSR-SRS 2046
Query: 183 PGDSRERSRN 192
P R RSR+
Sbjct: 2047 PLAIRRRSRS 2056
Score = 30.0 bits (66), Expect = 1.5
Identities = 42/154 (27%), Positives = 59/154 (38%), Gaps = 30/154 (19%)
Query: 50 RRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPH 109
RR G S P + R S+ RGR R P +R+R+R + P P
Sbjct: 1814 RRGGSGYHSRSPARQESSRTSSRRR----------RGRSRTPPTSRKRSRS--RTSPAPW 1861
Query: 110 VRAGPRFFIALAAPAARGLRVSSQGPGLWR-------GPAARKEGVARVGVA---AGLRL 159
R+ R A+PA R S+ P + R P +R+ +R V + R
Sbjct: 1862 KRSRSR-----ASPATH-RRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRA 1915
Query: 160 RP--RGRGRKTTPALSGHPARFPLQPGDSRERSR 191
P R R R TP ++ +R R RSR
Sbjct: 1916 SPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSR 1949
Score = 28.5 bits (62), Expect = 4.3
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 3/156 (1%)
Query: 58 SPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAG--PR 115
SP E+AG ++ +SP L P + R R S + + G P R+G P
Sbjct: 1387 SPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTPSRRSRSGSSPG 1446
Query: 116 FFIALAAPAARGLRVSSQG-PGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSG 174
P+ L SS G + R P+ + L PR R R +
Sbjct: 1447 LRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELN 1506
Query: 175 HPARFPLQPGDSRERSRNHRALELTWQPRGAKAGGA 210
+ P + E S + + + T + +++G +
Sbjct: 1507 NKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSS 1542
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 39.7 bits (91), Expect = 0.002
Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 21/174 (12%)
Query: 6 SHPKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHT-PRKPWPPIRRERPGLRSPKPREE 64
S P PG G A R C G P P +PWP R RP LR+ P
Sbjct: 331 SQAGPPSPGHAGRPRGPEAA----RPCARGPPSQEPGPPRPWPCALRPRPRLRAALPSRR 386
Query: 65 AGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEP---HVRAGPRFFIALA 121
R ++ + PG RP + + R PEP H++ + A
Sbjct: 387 LFSRGAAQQLPCCYKLHPGRHVPLRP---FKEKHSEARRRLPEPRQLHLQPVGANSVERA 443
Query: 122 A----------PAARGLRVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRG 165
A PA RG R GP + P A G + +G R G G
Sbjct: 444 ARRRRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGGG 497
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 39.7 bits (91), Expect = 0.002
Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 21/174 (12%)
Query: 6 SHPKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHT-PRKPWPPIRRERPGLRSPKPREE 64
S P PG G A R C G P P +PWP R RP LR+ P
Sbjct: 331 SQAGPPSPGHAGRPRGPEAA----RPCARGPPSQEPGPPRPWPCALRPRPRLRAALPSRR 386
Query: 65 AGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEP---HVRAGPRFFIALA 121
R ++ + PG RP + + R PEP H++ + A
Sbjct: 387 LFSRGAAQQLPCCYKLHPGRHVPLRP---FKEKHSEARRRLPEPRQLHLQPVGANSVERA 443
Query: 122 A----------PAARGLRVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRG 165
A PA RG R GP + P A G + +G R G G
Sbjct: 444 ARRRRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGGG 497
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 39.3 bits (90), Expect = 0.002
Identities = 48/163 (29%), Positives = 60/163 (36%), Gaps = 23/163 (14%)
Query: 33 PAGGPESHTPRKPWPPIRRER-PGL---RSPKPREEAGPRADSKAASPALFMGPGSR-GR 87
P GP +H+P P P +R R PG R P+PRE +S A+ L G R G
Sbjct: 247 PLPGP-AHSPAPPAPELREGRAPGSTAGRRPRPREPQAAE-ESGCATVGLRRGDCDRAGS 304
Query: 88 RRPPSWA----------RRRARGGRGSCPEPHVRAGP------RFFIALAAPAARGLRVS 131
+PP+ + RRR RGG G H GP R + A R
Sbjct: 305 SQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGE 364
Query: 132 SQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSG 174
GL P R+ A G L+ TP SG
Sbjct: 365 GSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSG 407
Score = 34.3 bits (77), Expect = 0.079
Identities = 47/161 (29%), Positives = 60/161 (37%), Gaps = 18/161 (11%)
Query: 28 GGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGR 87
GG+ P + KP PP + G +P+ + P + A+PA GP +
Sbjct: 164 GGQRAIFQRPPVYLGNKPTPP---RQEGSFGGRPKSQ--PPLPQETAAPAPQPGPTAPPA 218
Query: 88 RRPPSWARRRARG---GRGSCPEPHVR---AGPRFFIALAAPAARGLRVSSQGPGLWRGP 141
R P +R RG RGS P GP A AP R R G P
Sbjct: 219 RPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRP 278
Query: 142 ----AARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPAR 178
AA + G A VG+ G R G PA SG+ R
Sbjct: 279 REPQAAEESGCATVGLRRGDCDR---AGSSQPPATSGNGER 316
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 39.3 bits (90), Expect = 0.002
Identities = 48/163 (29%), Positives = 60/163 (36%), Gaps = 23/163 (14%)
Query: 33 PAGGPESHTPRKPWPPIRRER-PGL---RSPKPREEAGPRADSKAASPALFMGPGSR-GR 87
P GP +H+P P P +R R PG R P+PRE +S A+ L G R G
Sbjct: 247 PLPGP-AHSPAPPAPELREGRAPGSTAGRRPRPREPQAAE-ESGCATVGLRRGDCDRAGS 304
Query: 88 RRPPSWA----------RRRARGGRGSCPEPHVRAGP------RFFIALAAPAARGLRVS 131
+PP+ + RRR RGG G H GP R + A R
Sbjct: 305 SQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGE 364
Query: 132 SQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSG 174
GL P R+ A G L+ TP SG
Sbjct: 365 GSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSG 407
Score = 34.3 bits (77), Expect = 0.079
Identities = 47/161 (29%), Positives = 60/161 (37%), Gaps = 18/161 (11%)
Query: 28 GGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGR 87
GG+ P + KP PP + G +P+ + P + A+PA GP +
Sbjct: 164 GGQRAIFQRPPVYLGNKPTPP---RQEGSFGGRPKSQ--PPLPQETAAPAPQPGPTAPPA 218
Query: 88 RRPPSWARRRARG---GRGSCPEPHVR---AGPRFFIALAAPAARGLRVSSQGPGLWRGP 141
R P +R RG RGS P GP A AP R R G P
Sbjct: 219 RPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRP 278
Query: 142 ----AARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPAR 178
AA + G A VG+ G R G PA SG+ R
Sbjct: 279 REPQAAEESGCATVGLRRGDCDR---AGSSQPPATSGNGER 316
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 39.3 bits (90), Expect = 0.002
Identities = 48/163 (29%), Positives = 60/163 (36%), Gaps = 23/163 (14%)
Query: 33 PAGGPESHTPRKPWPPIRRER-PGL---RSPKPREEAGPRADSKAASPALFMGPGSR-GR 87
P GP +H+P P P +R R PG R P+PRE +S A+ L G R G
Sbjct: 247 PLPGP-AHSPAPPAPELREGRAPGSTAGRRPRPREPQAAE-ESGCATVGLRRGDCDRAGS 304
Query: 88 RRPPSWA----------RRRARGGRGSCPEPHVRAGP------RFFIALAAPAARGLRVS 131
+PP+ + RRR RGG G H GP R + A R
Sbjct: 305 SQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGE 364
Query: 132 SQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSG 174
GL P R+ A G L+ TP SG
Sbjct: 365 GSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSG 407
Score = 34.3 bits (77), Expect = 0.079
Identities = 47/161 (29%), Positives = 60/161 (37%), Gaps = 18/161 (11%)
Query: 28 GGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGR 87
GG+ P + KP PP + G +P+ + P + A+PA GP +
Sbjct: 164 GGQRAIFQRPPVYLGNKPTPP---RQEGSFGGRPKSQ--PPLPQETAAPAPQPGPTAPPA 218
Query: 88 RRPPSWARRRARG---GRGSCPEPHVR---AGPRFFIALAAPAARGLRVSSQGPGLWRGP 141
R P +R RG RGS P GP A AP R R G P
Sbjct: 219 RPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRP 278
Query: 142 ----AARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPAR 178
AA + G A VG+ G R G PA SG+ R
Sbjct: 279 REPQAAEESGCATVGLRRGDCDR---AGSSQPPATSGNGER 316
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 38.9 bits (89), Expect = 0.003
Identities = 56/184 (30%), Positives = 70/184 (38%), Gaps = 41/184 (22%)
Query: 40 HTPRKPWPPIRRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARR--- 96
H+PR+P PP R P P P+ P A P G RG+ +W +R
Sbjct: 149 HSPREPTPPGRLSAPPRHGPHPQSFRRP----SAHPPGRGSGRVPRGQPEQQAWEQRSSH 204
Query: 97 -------------RARGGRGSCPEPHVR----AGPRFFIALAAPAARGLRVSSQGPGLWR 139
A+ R P P R AG R PAARG S+Q P
Sbjct: 205 FLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARG---SAQQP---- 257
Query: 140 GPAARKEGVARVGVAAGLR-----LRPRGRGRKTTPALSGHPA--RFP-LQPGDSRERSR 191
P AR + V +AA L L+PR G + P L+ A R P L P R R R
Sbjct: 258 -PLARLLLASAVSLAASLARSPPPLQPR-LGSASPPRLAAPLAGSRAPSLSPFPRRCRRR 315
Query: 192 NHRA 195
R+
Sbjct: 316 AERS 319
Score = 37.4 bits (85), Expect = 0.009
Identities = 59/207 (28%), Positives = 76/207 (36%), Gaps = 63/207 (30%)
Query: 47 PPIRRERPGLRSPKPREEAGPRADSKAASPALF---------MGPGSRGRRRPPSWAR-- 95
PP++ P L S P A P A S+A S + F P G P S +R
Sbjct: 279 PPLQ---PRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGG 335
Query: 96 -------------RRARGGRGSCP--EPHVRAGPRFFIALAAP-------AARGLRVSSQ 133
RR RG R C P + AGP AAP AAR R
Sbjct: 336 EVVGARRRRGGEERRVRGRRQGCALGSPPIPAGP------AAPGRAGERRAARQWRKRGG 389
Query: 134 GPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKT----TPAL--SGHPARFPLQPG--- 184
GPG+ + +EG GV G + PR RG T +PA G P R G
Sbjct: 390 GPGV-----SPREGAQGEGVRGG--VTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRL 442
Query: 185 -----DSRERSRNHRALELTWQPRGAK 206
++ E H A T++P ++
Sbjct: 443 SAPSAEAEEVPGGHTASNPTYEPLSSR 469
Score = 32.0 bits (71), Expect = 0.39
Identities = 40/143 (27%), Positives = 50/143 (34%), Gaps = 12/143 (8%)
Query: 50 RRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPH 109
RR R G + R G R SP + GP + GR AR+ + G G P
Sbjct: 341 RRRRGG----EERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPR 396
Query: 110 VRAGPRFFIALAAPAARGLRVSSQ-GPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKT 168
A P ARG + P W+G A R AAG RL +
Sbjct: 397 EGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAP-----YRAIFAAGPRLSAPSAEAEE 451
Query: 169 TPALSGHPARFPLQPGDSRERSR 191
P GH A P S R++
Sbjct: 452 VP--GGHTASNPTYEPLSSRRTK 472
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 38.9 bits (89), Expect = 0.003
Identities = 54/158 (34%), Positives = 62/158 (39%), Gaps = 29/158 (18%)
Query: 6 SHPKPAIPGRGGE-----------KLALLLA-MLGGRCCPAGG--PESHTPRKPWPPIRR 51
+ P A GRGG KLA A +G R PAG E+ PR+P P R
Sbjct: 59 AQPISAPEGRGGAGSRSRYCHGDGKLAAAAAGTVGPRWLPAGQCLSEAERPRRPEPGGAR 118
Query: 52 ERPGLRSPKPREEAGPRADSK-----AASPALFMGPGSRGRRRPPSWARRRARGGRGSCP 106
RP SP A R +S ++ PAL RP S AR R R +
Sbjct: 119 SRPVAASPAASSRARSRPESSPGAPGSSVPALLPSLPPLAAPRPLS-ARPRLRPPQPQPL 177
Query: 107 EPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAAR 144
V GPR AP A G S Q G RGP AR
Sbjct: 178 ALTVGNGPR------APPAGG---SRQPRGSVRGPRAR 206
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 38.9 bits (89), Expect = 0.003
Identities = 56/184 (30%), Positives = 70/184 (38%), Gaps = 41/184 (22%)
Query: 40 HTPRKPWPPIRRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARR--- 96
H+PR+P PP R P P P+ P A P G RG+ +W +R
Sbjct: 149 HSPREPTPPGRLSAPPRHGPHPQSFRRP----SAHPPGRGSGRVPRGQPEQQAWEQRSSH 204
Query: 97 -------------RARGGRGSCPEPHVR----AGPRFFIALAAPAARGLRVSSQGPGLWR 139
A+ R P P R AG R PAARG S+Q P
Sbjct: 205 FLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARG---SAQQP---- 257
Query: 140 GPAARKEGVARVGVAAGLR-----LRPRGRGRKTTPALSGHPA--RFP-LQPGDSRERSR 191
P AR + V +AA L L+PR G + P L+ A R P L P R R R
Sbjct: 258 -PLARLLLASAVSLAASLARSPPPLQPR-LGSASPPRLAAPLAGSRAPSLSPFPRRCRRR 315
Query: 192 NHRA 195
R+
Sbjct: 316 AERS 319
Score = 37.4 bits (85), Expect = 0.009
Identities = 59/207 (28%), Positives = 76/207 (36%), Gaps = 63/207 (30%)
Query: 47 PPIRRERPGLRSPKPREEAGPRADSKAASPALF---------MGPGSRGRRRPPSWAR-- 95
PP++ P L S P A P A S+A S + F P G P S +R
Sbjct: 279 PPLQ---PRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGG 335
Query: 96 -------------RRARGGRGSCP--EPHVRAGPRFFIALAAP-------AARGLRVSSQ 133
RR RG R C P + AGP AAP AAR R
Sbjct: 336 EVVGARRRRGGEERRVRGRRQGCALGSPPIPAGP------AAPGRAGERRAARQWRKRGG 389
Query: 134 GPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKT----TPAL--SGHPARFPLQPG--- 184
GPG+ + +EG GV G + PR RG T +PA G P R G
Sbjct: 390 GPGV-----SPREGAQGEGVRGG--VTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRL 442
Query: 185 -----DSRERSRNHRALELTWQPRGAK 206
++ E H A T++P ++
Sbjct: 443 SAPSAEAEEVPGGHTASNPTYEPLSSR 469
Score = 32.0 bits (71), Expect = 0.39
Identities = 40/143 (27%), Positives = 50/143 (34%), Gaps = 12/143 (8%)
Query: 50 RRERPGLRSPKPREEAGPRADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPH 109
RR R G + R G R SP + GP + GR AR+ + G G P
Sbjct: 341 RRRRGG----EERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPR 396
Query: 110 VRAGPRFFIALAAPAARGLRVSSQ-GPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKT 168
A P ARG + P W+G A R AAG RL +
Sbjct: 397 EGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAP-----YRAIFAAGPRLSAPSAEAEE 451
Query: 169 TPALSGHPARFPLQPGDSRERSR 191
P GH A P S R++
Sbjct: 452 VP--GGHTASNPTYEPLSSRRTK 472
>gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo
sapiens]
Length = 267
Score = 38.5 bits (88), Expect = 0.004
Identities = 56/188 (29%), Positives = 63/188 (33%), Gaps = 27/188 (14%)
Query: 30 RCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGPRADSKAASPALF------MGPG 83
R C G P T P PP E+P S E AG A L + PG
Sbjct: 9 RKCQKGFPFQKTSHYPTPP--PEQPEYSSGAIMEAAGVDAMPHWGGQTLEGEWLRPLHPG 66
Query: 84 SRGRRRPPSWARRRAR--GGRGSCPEPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGP 141
+ G + PS A + P R GP AL P A G + PGL G
Sbjct: 67 AEGSQTRPSGAPQFTTLLALAAGSPWRPWRPGPALAGALRFPGAHGRLCAPPPPGLGLGQ 126
Query: 142 AARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPARFPLQPGDSRERSRNHRALELTWQ 201
AG LRPRG G P + PA Q G S S R
Sbjct: 127 GR-----------AGAGLRPRGAGSLPLPCTARLPAP---QLGTS---STTDRPCARPTA 169
Query: 202 PRGAKAGG 209
PRGA G
Sbjct: 170 PRGALRDG 177
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 38.5 bits (88), Expect = 0.004
Identities = 53/188 (28%), Positives = 67/188 (35%), Gaps = 25/188 (13%)
Query: 1 MSRAGSHPKPAIPGRGGEKLALLLAMLGGRCCPAGGP-ESHTPRKPWPPIRRERPGLRS- 58
M G P PGR G K G PAG P E P P + PG +
Sbjct: 693 MGLPGLSGNPGPPGRKGHK---------GYPGPAGHPGEQGQPGPEGSPGAKGYPGRQGL 743
Query: 59 PKPREEAGPRAD-SKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCP-------EPHV 110
P P + GP+ P LF PGS G R P +R + G P P +
Sbjct: 744 PGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGMPGFPGVFGERGPPGL 803
Query: 111 RAGPRFFIALAAPAARGL--RVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKT 168
P P GL + GP + GP K + VG GL+ +G +
Sbjct: 804 DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVG-EPGLK---GDKGEQG 859
Query: 169 TPALSGHP 176
P +SG P
Sbjct: 860 VPGVSGDP 867
Score = 35.8 bits (81), Expect = 0.027
Identities = 33/115 (28%), Positives = 40/115 (34%), Gaps = 15/115 (13%)
Query: 10 PAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGPRA 69
P +PG G +G P G P PP R PG+R K R GPR
Sbjct: 1020 PGVPGPKGS--------MGHPGMPGGMGTPGEPGPQGPPGSRGPPGMRGAKGRR--GPRG 1069
Query: 70 DSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPA 124
A GSRG + PP R R G+ G R F + P+
Sbjct: 1070 PDGPAGEQ-----GSRGLKGPPGPQGRPGRPGQQGVAGERGHLGSRGFPGIPGPS 1119
>gi|4885323 G protein-coupled receptor 37 [Homo sapiens]
Length = 613
Score = 37.7 bits (86), Expect = 0.007
Identities = 55/210 (26%), Positives = 75/210 (35%), Gaps = 35/210 (16%)
Query: 27 LGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREE------AGPRADSKAA------ 74
LG C P R W P R LR+ PREE AGP D AA
Sbjct: 40 LGESCAPT--VIQRRGRDAWGPGNSARDVLRARAPREEQGAAFLAGPSWDLPAAPGRDPA 97
Query: 75 ----SPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPAARGLRV 130
+ A GP R P W R +G RG P + G + L +
Sbjct: 98 AGRGAEASAAGPPGPPTRPPGPW---RWKGARGQEPSETLGRGNPTALQLFLQISEEEEK 154
Query: 131 SSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGR----------KTTPALSGHPARFP 180
+G G+ ++++ V V A+ L PR G+ KT L+GH
Sbjct: 155 GPRGAGI--SGRSQEQSVKTVPGASDLFYWPRRAGKLQGSHHKPLSKTANGLAGHEGWTI 212
Query: 181 LQPGDSRERSRNHRALELTWQPRGAKAGGA 210
PG R ++N E +P G + G +
Sbjct: 213 ALPG--RALAQNGSLGEGIHEPGGPRRGNS 240
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 37.7 bits (86), Expect = 0.007
Identities = 49/168 (29%), Positives = 59/168 (35%), Gaps = 14/168 (8%)
Query: 48 PIRRERPGLRSPKPREEAGP-RADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCP 106
P R RP R P PR + P R+ S A+ P + + S R A G R C
Sbjct: 75 PDSRTRPAARPPHPRTRSPPGRSGSGTTFSAV---PPRPSQHQSGSRLRPAAPGPRPGCS 131
Query: 107 EPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEGVARVGV----AAGLRLRPR 162
RA P A AAP A + GP +R +G +VG A G
Sbjct: 132 S--ARASP----APAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLT 185
Query: 163 GRGRKTTPALSGHPARFPLQPGDSRERSRNHRALELTWQPRGAKAGGA 210
R + P S P R P P SR S TW G A
Sbjct: 186 CRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAA 233
>gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]
Length = 2240
Score = 37.7 bits (86), Expect = 0.007
Identities = 66/235 (28%), Positives = 81/235 (34%), Gaps = 66/235 (28%)
Query: 1 MSRAGSHPKPAI---PGRGGEKLALLLAMLGGRCCPAGGPESHTPRK----PWPPIRRER 53
+S S P+P+ P R LA G CPA P + PR+ P PP+RR R
Sbjct: 202 LSLTPSFPEPSALSDPSRWSPVLA------PGSLCPAA-PGAQDPRRGKRAPRPPLRRRR 254
Query: 54 ---------PGLRSPKPREEAGPRADSKAA----SPAL------FMGPGSRGRRRPPSWA 94
P R +PR P A + A SPAL M GS GR A
Sbjct: 255 LPAAASAPAPVPRPSQPRRPGTPEAVASRAVAGLSPALPPGGLEEMAQGSGGR----EGA 310
Query: 95 RRRARGGRGSCPEPHVR-----------AGPRFFIALAAPAARGLRVSSQGPGLW----- 138
R GG S P P ++ PR APA G V + P W
Sbjct: 311 LRTPAGGWHSPPSPDMQELLRSVERDLSIDPR----QLAPAPGGTHVVALVPARWLASLR 366
Query: 139 -----RGPAARKEGVARVGVAA----GLRLRPRGRGRKTTPALSGHPARFPLQPG 184
GP R EG+ V ++ P G R L +PL G
Sbjct: 367 DRRLPLGPCPRAEGLGEAEVRTLLQRSVQRLPAGWTRVEVHGLRKRRLSYPLGGG 421
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 37.7 bits (86), Expect = 0.007
Identities = 49/168 (29%), Positives = 59/168 (35%), Gaps = 14/168 (8%)
Query: 48 PIRRERPGLRSPKPREEAGP-RADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCP 106
P R RP R P PR + P R+ S A+ P + + S R A G R C
Sbjct: 75 PDSRTRPAARPPHPRTRSPPGRSGSGTTFSAV---PPRPSQHQSGSRLRPAAPGPRPGCS 131
Query: 107 EPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEGVARVGV----AAGLRLRPR 162
RA P A AAP A + GP +R +G +VG A G
Sbjct: 132 S--ARASP----APAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLT 185
Query: 163 GRGRKTTPALSGHPARFPLQPGDSRERSRNHRALELTWQPRGAKAGGA 210
R + P S P R P P SR S TW G A
Sbjct: 186 CRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAA 233
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 37.7 bits (86), Expect = 0.007
Identities = 60/213 (28%), Positives = 74/213 (34%), Gaps = 34/213 (15%)
Query: 8 PKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGP 67
P+P+ P G E L P PE+ P RP RSP+P GP
Sbjct: 128 PRPSEPTPGSEALP-----------PGSLPEAAQPPSRPAAQPPSRPAFRSPRP--VRGP 174
Query: 68 RADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPA--- 124
LF G + RR + R G R R G + AA
Sbjct: 175 HPRRAVVVAVLF---GVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRP 231
Query: 125 --ARGLRVSSQGP-GLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPARFPL 181
RG +GP G+ R A+++ +ARV V R P R T PA FPL
Sbjct: 232 RLGRGPSRPPRGPVGVCRPQVAQRQRLARVCV----RSLPGNRRLATRSC----PAAFPL 283
Query: 182 QPG----DSRERSRNHRALELTWQPRGAKAGGA 210
Q G S R H L GA+ G A
Sbjct: 284 QGGATLPSSLPAPRLHLGSLLPSSSGGARLGDA 316
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 37.7 bits (86), Expect = 0.007
Identities = 49/168 (29%), Positives = 59/168 (35%), Gaps = 14/168 (8%)
Query: 48 PIRRERPGLRSPKPREEAGP-RADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCP 106
P R RP R P PR + P R+ S A+ P + + S R A G R C
Sbjct: 75 PDSRTRPAARPPHPRTRSPPGRSGSGTTFSAV---PPRPSQHQSGSRLRPAAPGPRPGCS 131
Query: 107 EPHVRAGPRFFIALAAPAARGLRVSSQGPGLWRGPAARKEGVARVGV----AAGLRLRPR 162
RA P A AAP A + GP +R +G +VG A G
Sbjct: 132 S--ARASP----APAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLT 185
Query: 163 GRGRKTTPALSGHPARFPLQPGDSRERSRNHRALELTWQPRGAKAGGA 210
R + P S P R P P SR S TW G A
Sbjct: 186 CRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAA 233
>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 37.4 bits (85), Expect = 0.009
Identities = 53/171 (30%), Positives = 62/171 (36%), Gaps = 36/171 (21%)
Query: 8 PKPAIPGRGGEKLALLLAMLGGRCCPAGGPESHTPRKPWPPIRRERPGLRSPKPREEAGP 67
P +PG G +A GG GG + +P+PP R ERP R AG
Sbjct: 27 PCQLLPGTGWMMRPGEVAPAGGSPLAVGGAFRVSSPRPFPP-RPERPSRR-----HRAGC 80
Query: 68 RADSKAASPALFMGPGSRGRRRPPSWARRRARGGRGSCPEPHVRAGPRFFIALAAPAARG 127
A GPGSRGR R RGS P AGP +A A R
Sbjct: 81 GAH----------GPGSRGRERR-----------RGSRDPP---AGP---VARARARGRS 113
Query: 128 LRVSSQGPGLWRGPAARKEGVARVGVAAGLRLRPRGRGRKTTPALSGHPAR 178
S+Q GPAA E A L P R R + + HP R
Sbjct: 114 APGSAQPASGAAGPAAAPEAAPPAWDPATL---PPSRKRNSLGSSPLHPVR 161
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.138 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,662,237
Number of Sequences: 37866
Number of extensions: 778819
Number of successful extensions: 4768
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 646
Number of HSP's that attempted gapping in prelim test: 4060
Number of HSP's gapped (non-prelim): 1239
length of query: 210
length of database: 18,247,518
effective HSP length: 98
effective length of query: 112
effective length of database: 14,536,650
effective search space: 1628104800
effective search space used: 1628104800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.