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Search of human proteins with 239744532
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744532 PREDICTED: hypothetical protein XP_002343185 [Homo
sapiens]
(185 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744532 PREDICTED: hypothetical protein XP_002343185 [Homo ... 376 e-105
gi|169217823 PREDICTED: similar to IQ motif and SEC7 domain-cont... 370 e-103
gi|113431383 PREDICTED: hypothetical protein [Homo sapiens] 370 e-103
gi|169214926 PREDICTED: similar to IQ motif and SEC7 domain-cont... 365 e-102
gi|113428915 PREDICTED: similar to IQ motif and SEC7 domain-cont... 365 e-102
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 62 4e-10
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 47 1e-05
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 47 1e-05
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 47 1e-05
gi|116805330 small conductance calcium-activated potassium chann... 44 8e-05
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 44 8e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 44 8e-05
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 43 1e-04
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 43 1e-04
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 43 1e-04
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 42 2e-04
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 42 3e-04
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 42 3e-04
gi|4557317 annexin A11 [Homo sapiens] 42 4e-04
gi|22165433 annexin A11 [Homo sapiens] 42 4e-04
gi|22165431 annexin A11 [Homo sapiens] 42 4e-04
gi|33356148 formin-like 1 [Homo sapiens] 41 5e-04
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 41 7e-04
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 41 7e-04
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 41 7e-04
gi|38569491 serine/threonine-protein kinase QSK [Homo sapiens] 41 7e-04
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 40 9e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 40 9e-04
gi|130502140 NEZHA isoform 2 [Homo sapiens] 40 9e-04
gi|122937255 NEZHA isoform 1 [Homo sapiens] 40 9e-04
>gi|239744532 PREDICTED: hypothetical protein XP_002343185 [Homo
sapiens]
Length = 185
Score = 376 bits (965), Expect = e-105
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MESLLENPVRAVLYLKELTAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
MESLLENPVRAVLYLKELTAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLYLKELTAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|169217823 PREDICTED: similar to IQ motif and SEC7
domain-containing protein 3 [Homo sapiens]
Length = 185
Score = 370 bits (950), Expect = e-103
Identities = 183/185 (98%), Positives = 183/185 (98%)
Query: 1 MESLLENPVRAVLYLKELTAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
MESLLENPVRAVL LKELTAIVQ QQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|113431383 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 370 bits (950), Expect = e-103
Identities = 183/185 (98%), Positives = 183/185 (98%)
Query: 1 MESLLENPVRAVLYLKELTAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
MESLLENPVRAVL LKELTAIVQ QQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|169214926 PREDICTED: similar to IQ motif and SEC7
domain-containing protein 3 [Homo sapiens]
Length = 185
Score = 365 bits (938), Expect = e-102
Identities = 181/185 (97%), Positives = 181/185 (97%)
Query: 1 MESLLENPVRAVLYLKELTAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
MESLLENPVRAVL LKELTAIVQ QQSLIHTQRERIDELERRLDELS ENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSP KHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|113428915 PREDICTED: similar to IQ motif and SEC7
domain-containing protein 3 [Homo sapiens]
Length = 185
Score = 365 bits (938), Expect = e-102
Identities = 181/185 (97%), Positives = 181/185 (97%)
Query: 1 MESLLENPVRAVLYLKELTAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLL 60
MESLLENPVRAVL LKELTAIVQ QQSLIHTQRERIDELERRLDELS ENRSLWEHQQLL
Sbjct: 1 MESLLENPVRAVLCLKELTAIVQKQQSLIHTQRERIDELERRLDELSTENRSLWEHQQLL 60
Query: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL
Sbjct: 61 QAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL 120
Query: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
LEQPQRGPGSRAHTPQSP KHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL
Sbjct: 121 LEQPQRGPGSRAHTPQSPQKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGVL 180
Query: 181 SRRPE 185
SRRPE
Sbjct: 181 SRRPE 185
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 61.6 bits (148), Expect = 4e-10
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 6 ENPVRAVLYLKELTAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQL 59
E+P RAV YL EL I+++QQ L+ TQR RI+ELE +LD+L+ ENR L E QL
Sbjct: 14 ESPNRAVEYLLELNNIIESQQQLLETQRRRIEELEGQLDQLTQENRDLREESQL 67
Score = 30.4 bits (67), Expect = 0.91
Identities = 33/123 (26%), Positives = 38/123 (30%), Gaps = 42/123 (34%)
Query: 58 QLLQAQPPPGLVPP--------SSAPLPAA-------PATAPAAAARAQEPLQDQGQRSA 102
QL PPP PP + P+P P AP A G+
Sbjct: 1302 QLGSIPPPPASAPPVGPHRHFHAHGPVPGPQHYTLGRPGRAPRRGAGGHPQFAPHGRHPL 1361
Query: 103 AAP-------HPAPDRPPRQ----------HHGQLLEQPQR--GPGSRA--------HTP 135
P PAP PP HH Q++ GPGSR H P
Sbjct: 1362 HQPTSPLPLYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSRPPGGSYSHPHHP 1421
Query: 136 QSP 138
QSP
Sbjct: 1422 QSP 1424
Score = 28.1 bits (61), Expect = 4.5
Identities = 25/85 (29%), Positives = 31/85 (36%), Gaps = 17/85 (20%)
Query: 65 PPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDR--------PPRQH 116
PP +PP LP P P P A+AP P R P QH
Sbjct: 1279 PPPYLPPQQPSLPPPPQQPPPLPQLGSIP-----PPPASAPPVGPHRHFHAHGPVPGPQH 1333
Query: 117 HGQLLEQPQRGP--GSRAHTPQSPH 139
+ L +P R P G+ H +PH
Sbjct: 1334 Y--TLGRPGRAPRRGAGGHPQFAPH 1356
Score = 27.7 bits (60), Expect = 5.9
Identities = 27/120 (22%), Positives = 40/120 (33%), Gaps = 20/120 (16%)
Query: 57 QQLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPD------ 110
++L +PPP P AP P P P + ++ +++G R D
Sbjct: 530 ERLPSTEPPPQGRPEFWAPAPLPPVPPPVPSGTREDGSREEGTRRGPGCLECRDFRLRAA 589
Query: 111 -------RPPRQHHGQLLEQPQRGPGSRAHTPQ----SPH---KHLGTQGAVTDKEKERP 156
PP L ++ RG R + SPH KH G G + P
Sbjct: 590 HLPLLTIEPPSDSSVDLSDRSDRGSVHRQLVYEADGCSPHGTLKHKGPPGRAPIPHRHYP 649
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 46.6 bits (109), Expect = 1e-05
Identities = 46/138 (33%), Positives = 52/138 (37%), Gaps = 22/138 (15%)
Query: 57 QQLLQAQP-----PPGLVP-PSSAP--LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPA 108
QQ+LQAQP P G+ P PSSAP P P P +A A P A A
Sbjct: 177 QQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA 236
Query: 109 PDRPPRQHHGQLLE--QPQRGPGSRAHTPQSPHKHL----GTQGAVTDKEKERPP----- 157
P P H Q PQR P SPH L G+ G + +PP
Sbjct: 237 PTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQG 296
Query: 158 ---SCCAAAGALLQHKSP 172
AG LLQH P
Sbjct: 297 PPGPHSLQAGPLLQHPGP 314
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 13/89 (14%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQH----- 116
A PPP + P S PLP++PA P P AP P QH
Sbjct: 429 AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPG 488
Query: 117 --------HGQLLEQPQRGPGSRAHTPQS 137
P GPG+ A P S
Sbjct: 489 GPPPITPPTCPSTSTPPAGPGTSAQPPCS 517
Score = 32.7 bits (73), Expect = 0.18
Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 58 QLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSA--AAPHPAPDRPPRQ 115
Q Q Q P G P ++ P + A +A ++Q+P ++Q A A PH P PP
Sbjct: 323 QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP--PPTT 380
Query: 116 HHGQLLEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSA 174
QL P + H P HL + PP +L H PSA
Sbjct: 381 PIPQL-----PAPQAHKHPP-----HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSA 429
Score = 28.9 bits (63), Expect = 2.6
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 18/102 (17%)
Query: 64 PPPGLVP-PSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ--- 119
P P L P SA P+AP + AQ PL QG PH P QH G
Sbjct: 268 PHPPLQPLTGSAGQPSAP-------SHAQPPLHGQG---PPGPHSLQAGPLLQHPGPPQP 317
Query: 120 --LLEQPQRGPGSRAHTPQS--PHKHLGTQGAVTDKEKERPP 157
L Q +G +P + PH L + + + ++PP
Sbjct: 318 FGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPP 359
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 46.6 bits (109), Expect = 1e-05
Identities = 46/138 (33%), Positives = 52/138 (37%), Gaps = 22/138 (15%)
Query: 57 QQLLQAQP-----PPGLVP-PSSAP--LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPA 108
QQ+LQAQP P G+ P PSSAP P P P +A A P A A
Sbjct: 731 QQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA 790
Query: 109 PDRPPRQHHGQLLE--QPQRGPGSRAHTPQSPHKHL----GTQGAVTDKEKERPP----- 157
P P H Q PQR P SPH L G+ G + +PP
Sbjct: 791 PTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQG 850
Query: 158 ---SCCAAAGALLQHKSP 172
AG LLQH P
Sbjct: 851 PPGPHSLQAGPLLQHPGP 868
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 13/89 (14%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQH----- 116
A PPP + P S PLP++PA P P AP P QH
Sbjct: 983 AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
Query: 117 --------HGQLLEQPQRGPGSRAHTPQS 137
P GPG+ A P S
Sbjct: 1043 GPPPITPPTCPSTSTPPAGPGTSAQPPCS 1071
Score = 32.7 bits (73), Expect = 0.18
Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 58 QLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSA--AAPHPAPDRPPRQ 115
Q Q Q P G P ++ P + A +A ++Q+P ++Q A A PH P PP
Sbjct: 877 QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP--PPTT 934
Query: 116 HHGQLLEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSA 174
QL P + H P HL + PP +L H PSA
Sbjct: 935 PIPQL-----PAPQAHKHPP-----HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSA 983
Score = 28.9 bits (63), Expect = 2.6
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 18/102 (17%)
Query: 64 PPPGLVP-PSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ--- 119
P P L P SA P+AP + AQ PL QG PH P QH G
Sbjct: 822 PHPPLQPLTGSAGQPSAP-------SHAQPPLHGQG---PPGPHSLQAGPLLQHPGPPQP 871
Query: 120 --LLEQPQRGPGSRAHTPQS--PHKHLGTQGAVTDKEKERPP 157
L Q +G +P + PH L + + + ++PP
Sbjct: 872 FGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPP 913
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 46.6 bits (109), Expect = 1e-05
Identities = 46/138 (33%), Positives = 52/138 (37%), Gaps = 22/138 (15%)
Query: 57 QQLLQAQP-----PPGLVP-PSSAP--LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPA 108
QQ+LQAQP P G+ P PSSAP P P P +A A P A A
Sbjct: 731 QQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA 790
Query: 109 PDRPPRQHHGQLLE--QPQRGPGSRAHTPQSPHKHL----GTQGAVTDKEKERPP----- 157
P P H Q PQR P SPH L G+ G + +PP
Sbjct: 791 PTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQG 850
Query: 158 ---SCCAAAGALLQHKSP 172
AG LLQH P
Sbjct: 851 PPGPHSLQAGPLLQHPGP 868
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 13/89 (14%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQH----- 116
A PPP + P S PLP++PA P P AP P QH
Sbjct: 983 AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
Query: 117 --------HGQLLEQPQRGPGSRAHTPQS 137
P GPG+ A P S
Sbjct: 1043 GPPPITPPTCPSTSTPPAGPGTSAQPPCS 1071
Score = 32.7 bits (73), Expect = 0.18
Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 58 QLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSA--AAPHPAPDRPPRQ 115
Q Q Q P G P ++ P + A +A ++Q+P ++Q A A PH P PP
Sbjct: 877 QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP--PPTT 934
Query: 116 HHGQLLEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSA 174
QL P + H P HL + PP +L H PSA
Sbjct: 935 PIPQL-----PAPQAHKHPP-----HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSA 983
Score = 28.9 bits (63), Expect = 2.6
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 18/102 (17%)
Query: 64 PPPGLVP-PSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ--- 119
P P L P SA P+AP + AQ PL QG PH P QH G
Sbjct: 822 PHPPLQPLTGSAGQPSAP-------SHAQPPLHGQG---PPGPHSLQAGPLLQHPGPPQP 871
Query: 120 --LLEQPQRGPGSRAHTPQS--PHKHLGTQGAVTDKEKERPP 157
L Q +G +P + PH L + + + ++PP
Sbjct: 872 FGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPP 913
>gi|116805330 small conductance calcium-activated potassium channel
protein 3 isoform a [Homo sapiens]
Length = 731
Score = 43.9 bits (102), Expect = 8e-05
Identities = 33/117 (28%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 55 EHQQLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPR 114
+ QQ Q Q PP PP++ P P+ P Q+ Q Q Q+ PHP
Sbjct: 32 QQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQQQQQQQQQQQPPHPLSQLAQL 91
Query: 115 Q----HHGQLLEQP---QRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAG 164
Q H G L P + P S + P G+Q + D PS A +G
Sbjct: 92 QSQPVHPGLLHSSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSG 148
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 43.9 bits (102), Expect = 8e-05
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 63 QPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRS-----AAAPHPAPDRPPRQHH 117
+P G P+ LP PA P A Q P Q G + A+ P P P PP Q
Sbjct: 369 RPKAGQTQPNPGILPIQPALTPRKRATVQPPPQAAGSSNQPGLLASVPQPKPQAPPSQPL 428
Query: 118 GQLLEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKER 155
Q + + P + TP + + L Q T + +++
Sbjct: 429 PQTQAKQPQAPPTPQQTPSTQAQGLPAQAQATPQHQQQ 466
Score = 30.4 bits (67), Expect = 0.91
Identities = 25/80 (31%), Positives = 29/80 (36%), Gaps = 8/80 (10%)
Query: 59 LLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHG 118
LL + P P P S PLP A P A Q+ Q Q A P QH
Sbjct: 411 LLASVPQPKPQAPPSQPLPQTQAKQPQAPPTPQQTPSTQAQGLPAQAQATP-----QHQQ 465
Query: 119 QLL---EQPQRGPGSRAHTP 135
QL +Q Q+ P P
Sbjct: 466 QLFLKQQQQQQQPPPAQQQP 485
Score = 28.1 bits (61), Expect = 4.5
Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 12/111 (10%)
Query: 23 QNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLLQAQPPPGLVPPSSAPLPAAPAT 82
Q Q+ Q+++ + +++ + + L Q LQ +P AAP
Sbjct: 526 QLMQNFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQPQPQPAAAPQP 585
Query: 83 APAAAARAQEPLQD------------QGQRSAAAPHPAPDRPPRQHHGQLL 121
APA Q P++ QGQ+ + P+ + R H ++L
Sbjct: 586 APAQEPAIQAPVRQQPKVQTTPPPAVQGQKVGSLTPPSSPKTQRAGHRRIL 636
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 43.9 bits (102), Expect = 8e-05
Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAP-----HPAPDRPPRQH 116
A PP + PPS P PAT P++ P +G AA PA PP
Sbjct: 1332 APTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAM-TPPSPK 1390
Query: 117 HGQLLEQPQRGPGSRAHTPQSPHKHLGT----QGAVTDKEKERPP 157
G + P+ P S A P SP K T +GA T + + P
Sbjct: 1391 RGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTP 1435
Score = 39.3 bits (90), Expect = 0.002
Identities = 33/102 (32%), Positives = 38/102 (37%), Gaps = 15/102 (14%)
Query: 62 AQPP-----PGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQH 116
A PP P PP AP P A AT P+ P AP+PA PP
Sbjct: 1246 ATPPSPKGGPATPPPKGAPTPPA-ATPPSLKGGLATPPHK------GAPNPAVVTPPSPK 1298
Query: 117 HGQLLEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPS 158
G P+ P A TP SP G+ G K PP+
Sbjct: 1299 GGPATSPPKGAPTPPAATPPSPK---GSPGTPPPKGAPTPPA 1337
Score = 38.1 bits (87), Expect = 0.004
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPD----RPPRQHH 117
A PP PPS PA P+ A A P +G + +P AP PP
Sbjct: 939 APTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKG 998
Query: 118 GQLLEQPQRGPGSRAHTPQSP 138
G P+ P A TP SP
Sbjct: 999 GPATPSPKGAPTPPAVTPPSP 1019
Score = 37.4 bits (85), Expect = 0.007
Identities = 35/104 (33%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRP---PRQHHG 118
A PP PPS PA P+ A A P +G + AP P P G
Sbjct: 1079 APTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKG 1138
Query: 119 QLLEQPQRG-PGSRAHTPQSPHKHLGT---QGAVTDKEKERPPS 158
L P +G P + A TP SP L T +GA T PPS
Sbjct: 1139 GLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPT-TPAATPPS 1181
Score = 36.6 bits (83), Expect = 0.013
Identities = 36/111 (32%), Positives = 44/111 (39%), Gaps = 15/111 (13%)
Query: 62 AQPPPGLVPPSSAPLPAAP----ATAP---AAAARAQEPLQDQGQRSAAAPHPAPDRP-- 112
A PPP P + A P +P AT P A A P +G + +P AP P
Sbjct: 1141 ATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1200
Query: 113 --PRQHHGQLLEQPQRGPGSRAHTPQSPHKHLGT---QGAVTDKEKERPPS 158
P G P+ P + A TP SP L T +GA T PPS
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT-TPAATPPS 1250
Score = 33.5 bits (75), Expect = 0.11
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 8/104 (7%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRP----PRQHH 117
A P PPS A P A A P +G + P AP P P
Sbjct: 1125 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1184
Query: 118 GQLLEQPQRGPGSRAHTPQSPHKHLGT---QGAVTDKEKERPPS 158
G P+ P + A TP SP L T +GA T PPS
Sbjct: 1185 GLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT-TPAATPPS 1227
Score = 33.1 bits (74), Expect = 0.14
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPD----RPPRQHH 117
A P PPS A P+ A A P +G + +P AP PP
Sbjct: 1171 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1230
Query: 118 GQLLEQPQRGPGSRAHTPQSP 138
G P+ P + A TP SP
Sbjct: 1231 GLATPSPKGAPTTPAATPPSP 1251
Score = 33.1 bits (74), Expect = 0.14
Identities = 36/132 (27%), Positives = 48/132 (36%), Gaps = 11/132 (8%)
Query: 62 AQPPPGLVP--PSSAPLPAAPATAPAAAARAQEPLQ------DQGQRSAAAPHPAPDRPP 113
A P P P PSS + PA P+ A P + AP P PP
Sbjct: 1563 AIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPP 1622
Query: 114 RQHHGQLLEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPS 173
G P+ P S TP S + +VT K P A+ L K P+
Sbjct: 1623 SPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQ---ASKGLPAKKGPT 1679
Query: 174 ALGKGVLSRRPE 185
AL + +++ PE
Sbjct: 1680 ALKEVLVAPAPE 1691
Score = 31.2 bits (69), Expect = 0.53
Identities = 23/74 (31%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLL 121
A PP PPS PA P+ A A P +G + +P AP P
Sbjct: 962 APTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPP--------A 1013
Query: 122 EQPQRGPGSRAHTP 135
P GS A TP
Sbjct: 1014 VTPPSPKGSPAATP 1027
Score = 30.8 bits (68), Expect = 0.69
Identities = 35/137 (25%), Positives = 48/137 (35%), Gaps = 14/137 (10%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSA------AAPHPAPDRPPRQ 115
A PP PPS PA P+ A A P +G +A A+ PA P +
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK 1044
Query: 116 HHGQLLEQPQRGPGSRAHTPQSPH--------KHLGTQGAVTDKEKERPPSCCAAAGALL 167
P+ P + A T SP K T A T + P+ + GA +
Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM 1104
Query: 168 QHKSPSALGKGVLSRRP 184
+ KG L+ P
Sbjct: 1105 PPAATPPSPKGGLATPP 1121
Score = 30.8 bits (68), Expect = 0.69
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
Query: 62 AQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRP---PRQHHG 118
A P PPS A P+ A A P +G + P AP P P G
Sbjct: 1217 APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKG 1276
Query: 119 QLLEQPQRG-PGSRAHTPQSP 138
L P +G P TP SP
Sbjct: 1277 GLATPPHKGAPNPAVVTPPSP 1297
Score = 28.1 bits (61), Expect = 4.5
Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 21/112 (18%)
Query: 64 PPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQ 123
P G PSS P PA P + +EP + ++++P AP P
Sbjct: 1452 PKGGPATPSSKGDPTLPAVTPPS---PKEPPAPKQVATSSSPKKAPATP----------A 1498
Query: 124 PQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSAL 175
P P A P SP + T + D A LL K+P+ L
Sbjct: 1499 PMGAPTLPAVIPSSPKEVPATPSSRRDP--------IAPTATLLSKKTPATL 1542
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 1e-04
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 68 LVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRG 127
++ P+ AP PA PA APA A A P A AP PAPD P++ Q Q QRG
Sbjct: 166 VLAPAPAPAPA-PAPAPAPVA-APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRG 223
Query: 128 PGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGA 165
P + H G G RP + AAA A
Sbjct: 224 -----QEPLADQLHSGISG--------RPAAGTAAASA 248
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 1e-04
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 68 LVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRG 127
++ P+ AP PA PA APA A A P A AP PAPD P++ Q Q QRG
Sbjct: 166 VLAPAPAPAPA-PAPAPAPVA-APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRG 223
Query: 128 PGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGA 165
P + H G G RP + AAA A
Sbjct: 224 -----QEPLADQLHSGISG--------RPAAGTAAASA 248
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 43.1 bits (100), Expect = 1e-04
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 68 LVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRG 127
++ P+ AP PA PA APA A A P A AP PAPD P++ Q Q QRG
Sbjct: 177 VLAPAPAPAPA-PAPAPAPVA-APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRG 234
Query: 128 PGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGA 165
P + H G G RP + AAA A
Sbjct: 235 -----QEPLADQLHSGISG--------RPAAGTAAASA 259
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 42.4 bits (98), Expect = 2e-04
Identities = 52/200 (26%), Positives = 72/200 (36%), Gaps = 51/200 (25%)
Query: 14 YLKELTAIVQNQQSLIHTQRERI--DELERRLDELS-AENRSLWEHQQLL---QAQPPPG 67
+ +EL I+ ++ + QR+++ D +++L AE R+ +H Q + Q QPPP
Sbjct: 936 HFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPA 995
Query: 68 LVPPSSAPLPAAPATAPAAA------------------------------ARAQEPLQDQ 97
L PP S P+P A P A +A Q
Sbjct: 996 L-PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQ 1054
Query: 98 GQRSAAAPHPA---PDRPPRQHHGQLLEQPQRGPGSR--AHTPQSPHKHLGTQGAVTDKE 152
Q+ A AP P P PP HG Q+ P S P S H + Q
Sbjct: 1055 QQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAAQS------ 1108
Query: 153 KERPPSCCAAAGALLQHKSP 172
P A G LL SP
Sbjct: 1109 ---PAIVAAVQGNLLPSASP 1125
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 42.0 bits (97), Expect = 3e-04
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 14 YLKELTAIVQNQQSLIHTQRERI--DELERRLDELS-AENRSLWEHQQLL---QAQPPPG 67
+ +EL I+ ++ + QR+++ D +++L AE R+ +H Q + Q QPPP
Sbjct: 936 HFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPA 995
Query: 68 LVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL------- 120
L PP S P+P A P A A + P P + GQ
Sbjct: 996 L-PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQ 1054
Query: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAA 163
+QP P A P P G G ++ PPS A
Sbjct: 1055 QQQPAGAPQPGAVPPGVPPP--GPHGPSPFPNQQTPPSMMPGA 1095
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 42.0 bits (97), Expect = 3e-04
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 16/163 (9%)
Query: 14 YLKELTAIVQNQQSLIHTQRERI--DELERRLDELS-AENRSLWEHQQLL---QAQPPPG 67
+ +EL I+ ++ + QR+++ D +++L AE R+ +H Q + Q QPPP
Sbjct: 905 HFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPA 964
Query: 68 LVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQL------- 120
L PP S P+P A P A A + P P + GQ
Sbjct: 965 L-PPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQ 1023
Query: 121 LEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAA 163
+QP P A P P G G ++ PPS A
Sbjct: 1024 QQQPAGAPQPGAVPPGVPPP--GPHGPSPFPNQQTPPSMMPGA 1064
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 41.6 bits (96), Expect = 4e-04
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 64 PPPGLVPPSSAP----LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
PPPG PPS P P AP Q+P G P P +PP GQ
Sbjct: 107 PPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQP---PGAYPGQPPVTYPGQPPVPLPGQ 163
Query: 120 LLEQPQRG--PGSRAHTPQSPHKHLGTQGAVTD 150
P PGS TP P G++G +TD
Sbjct: 164 QQPVPSYPGYPGSGTVTPAVPPTQFGSRGTITD 196
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 41.6 bits (96), Expect = 4e-04
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 64 PPPGLVPPSSAP----LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
PPPG PPS P P AP Q+P G P P +PP GQ
Sbjct: 107 PPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQP---PGAYPGQPPVTYPGQPPVPLPGQ 163
Query: 120 LLEQPQRG--PGSRAHTPQSPHKHLGTQGAVTD 150
P PGS TP P G++G +TD
Sbjct: 164 QQPVPSYPGYPGSGTVTPAVPPTQFGSRGTITD 196
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 41.6 bits (96), Expect = 4e-04
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 64 PPPGLVPPSSAP----LPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
PPPG PPS P P AP Q+P G P P +PP GQ
Sbjct: 107 PPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQP---PGAYPGQPPVTYPGQPPVPLPGQ 163
Query: 120 LLEQPQRG--PGSRAHTPQSPHKHLGTQGAVTD 150
P PGS TP P G++G +TD
Sbjct: 164 QQPVPSYPGYPGSGTVTPAVPPTQFGSRGTITD 196
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 41.2 bits (95), Expect = 5e-04
Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 25/125 (20%)
Query: 62 AQPPPGLVPPSSAPLPA--APATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
A+P PG PP PLP +P AP +A PL +P P P P
Sbjct: 534 AEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPL-------PGSPEPPPAPPL------ 580
Query: 120 LLEQPQRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALGKGV 179
PG P P GT G V PP AL + S LG GV
Sbjct: 581 --------PGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDAL--GRRDSELGPGV 630
Query: 180 LSRRP 184
+++P
Sbjct: 631 KAKKP 635
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 62 AQPPPGLVPPSSAPL-PAAPATAPA-AAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
AQ P PP AP PAAPA+ P + A A PL+ A PAP RPP G
Sbjct: 191 AQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRSHKPTVAVRILPAPPRPPISSPGP 250
Query: 120 LL--EQPQRGPGSRAHT---PQSPHKHLG 143
++ P R G H P HLG
Sbjct: 251 IIWVSSPARSLGPLLHALLHPPLTCSHLG 279
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 62 AQPPPGLVPPSSAPL-PAAPATAPA-AAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
AQ P PP AP PAAPA+ P + A A PL+ A PAP RPP G
Sbjct: 191 AQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRSHKPTVAVRILPAPPRPPISSPGP 250
Query: 120 LL--EQPQRGPGSRAHT---PQSPHKHLG 143
++ P R G H P HLG
Sbjct: 251 IIWVSSPARSLGPLLHALLHPPLTCSHLG 279
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 62 AQPPPGLVPPSSAPL-PAAPATAPA-AAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQ 119
AQ P PP AP PAAPA+ P + A A PL+ A PAP RPP G
Sbjct: 191 AQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRSHKPTVAVRILPAPPRPPISSPGP 250
Query: 120 LL--EQPQRGPGSRAHT---PQSPHKHLG 143
++ P R G H P HLG
Sbjct: 251 IIWVSSPARSLGPLLHALLHPPLTCSHLG 279
>gi|38569491 serine/threonine-protein kinase QSK [Homo sapiens]
Length = 1263
Score = 40.8 bits (94), Expect = 7e-04
Identities = 40/144 (27%), Positives = 56/144 (38%), Gaps = 20/144 (13%)
Query: 19 TAIVQNQQSLIHTQRERIDELERRLDELSAENRSLWE---HQQLLQAQPPPGLVPPS-SA 74
++I Q QQ Q+ +++ R E + + L++ H Q+LQ Q + PP S
Sbjct: 588 SSIKQLQQECEQLQKMYGGQIDERTLEKTQQQHMLYQQEQHHQILQQQIQDSICPPQPSP 647
Query: 75 PLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRGPGSRAHT 134
PL AA PA L Q QR P P P H L QP P +
Sbjct: 648 PLQAACENQPAL-------LTHQLQRLRIQPSSPPPNHPNNH---LFRQPSNSPPPMSSA 697
Query: 135 PQSPHKHLGTQGAVTDKEKERPPS 158
PH GA + + + PS
Sbjct: 698 MIQPH------GAASSSQFQGLPS 715
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 40.4 bits (93), Expect = 9e-04
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 26/112 (23%)
Query: 65 PPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQP 124
PP L P + +PAAP+ P A ++P P P P H L
Sbjct: 97 PPALQPRGAPAVPAAPSPGPLPA-------------RPSSPPPRPSLPSGPHRPVL---- 139
Query: 125 QRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALG 176
P S P+ P QG+VT +E+E+ P AGA P ALG
Sbjct: 140 ---PPSALAAPRPPLARPLPQGSVTAREQEQRPRSRRRAGA------PEALG 182
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 40.4 bits (93), Expect = 9e-04
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 26/112 (23%)
Query: 65 PPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQP 124
PP L P + +PAAP+ P A ++P P P P H L
Sbjct: 97 PPALQPRGAPAVPAAPSPGPLPA-------------RPSSPPPRPSLPSGPHRPVL---- 139
Query: 125 QRGPGSRAHTPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSALG 176
P S P+ P QG+VT +E+E+ P AGA P ALG
Sbjct: 140 ---PPSALAAPRPPLARPLPQGSVTAREQEQRPRSRRRAGA------PEALG 182
>gi|130502140 NEZHA isoform 2 [Homo sapiens]
Length = 1249
Score = 40.4 bits (93), Expect = 9e-04
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 36 IDELERRLDELSAENRSLWEHQQLLQAQPP-PGLVPPSSAPLPAAPATAPAAAARAQEPL 94
+ +L L L + + L + QQ L A P PG PP +A + P T P AA+ +
Sbjct: 703 VSKLSAALSSLQRDMQRLTDQQQRLLAPPEAPGSAPPPAAWVIPGPTTGPKAASPSPARR 762
Query: 95 QDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRGPGSRAHTPQSPH 139
+RS P P P + PR + + P +R TP PH
Sbjct: 763 VPATRRS---PGPGPSQSPRSPKHTRPAELRLAPLTRVLTP--PH 802
Score = 35.0 bits (79), Expect = 0.037
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 21 IVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLLQAQPPPGLVPPSSAPLPAAP 80
+ Q + SL+ Q+ R +E RR E E L + PG P SA A P
Sbjct: 899 MAQKRASLLERQQRRAEEARRRKQWQEVEKEQRREEAARLAQEEAPGPAPLVSAVPMATP 958
Query: 81 ATAPAAAARAQE 92
APAA A A+E
Sbjct: 959 --APAARAPAEE 968
>gi|122937255 NEZHA isoform 1 [Homo sapiens]
Length = 1276
Score = 40.4 bits (93), Expect = 9e-04
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 36 IDELERRLDELSAENRSLWEHQQLLQAQPP-PGLVPPSSAPLPAAPATAPAAAARAQEPL 94
+ +L L L + + L + QQ L A P PG PP +A + P T P AA+ +
Sbjct: 730 VSKLSAALSSLQRDMQRLTDQQQRLLAPPEAPGSAPPPAAWVIPGPTTGPKAASPSPARR 789
Query: 95 QDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRGPGSRAHTPQSPH 139
+RS P P P + PR + + P +R TP PH
Sbjct: 790 VPATRRS---PGPGPSQSPRSPKHTRPAELRLAPLTRVLTP--PH 829
Score = 35.0 bits (79), Expect = 0.037
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 21 IVQNQQSLIHTQRERIDELERRLDELSAENRSLWEHQQLLQAQPPPGLVPPSSAPLPAAP 80
+ Q + SL+ Q+ R +E RR E E L + PG P SA A P
Sbjct: 926 MAQKRASLLERQQRRAEEARRRKQWQEVEKEQRREEAARLAQEEAPGPAPLVSAVPMATP 985
Query: 81 ATAPAAAARAQE 92
APAA A A+E
Sbjct: 986 --APAARAPAEE 995
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,708,379
Number of Sequences: 37866
Number of extensions: 615595
Number of successful extensions: 9748
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 921
Number of HSP's that attempted gapping in prelim test: 6036
Number of HSP's gapped (non-prelim): 3778
length of query: 185
length of database: 18,247,518
effective HSP length: 96
effective length of query: 89
effective length of database: 14,612,382
effective search space: 1300501998
effective search space used: 1300501998
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.