Guide to the Human Genome
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Search of human proteins with 239744305

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744305 PREDICTED: hypothetical protein XP_002343094 [Homo
sapiens]
         (114 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755538 PREDICTED: hypothetical protein [Homo sapiens]           234   1e-62
gi|239749994 PREDICTED: hypothetical protein XP_002347233 [Homo ...   234   1e-62
gi|239744305 PREDICTED: hypothetical protein XP_002343094 [Homo ...   234   1e-62
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]    32   0.11 
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]    32   0.11 
gi|239753240 PREDICTED: hypothetical protein XP_002345595 [Homo ...    31   0.24 
gi|239747803 PREDICTED: hypothetical protein XP_002348320 [Homo ...    31   0.24 
gi|239741677 PREDICTED: hypothetical protein XP_002342280 [Homo ...    31   0.24 
gi|4503595 eosinophil peroxidase [Homo sapiens]                        31   0.24 
gi|238859651 pleckstrin homology domain containing family A memb...    29   0.70 
gi|145301567 hypothetical protein LOC56006 [Homo sapiens]              29   0.70 
gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]              29   0.70 
gi|74271816 radical fringe [Homo sapiens]                              28   1.2  
gi|126366080 regulator of G-protein signaling 9 isoform 2 [Homo ...    28   1.2  
gi|126365761 regulator of G-protein signaling 9 isoform 1 [Homo ...    28   1.2  
gi|29366828 synaptotagmin XII [Homo sapiens]                           28   1.2  
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    28   1.6  
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    28   1.6  
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ...    28   1.6  
gi|59806363 hypothetical protein LOC9729 [Homo sapiens]                28   2.0  
gi|7662092 zinc finger protein 536 [Homo sapiens]                      28   2.0  
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]                 27   2.7  
gi|170650672 Leber congenital amaurosis 5 [Homo sapiens]               27   2.7  
gi|170650670 Leber congenital amaurosis 5 [Homo sapiens]               27   2.7  
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    27   2.7  
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom...    27   3.5  
gi|109659849 filamin A interacting protein 1-like isoform 2 [Hom...    27   3.5  
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom...    27   3.5  
gi|239740928 PREDICTED: hypothetical protein XP_002344099 [Homo ...    27   4.6  
gi|45331217 zinc finger protein 526 [Homo sapiens]                     27   4.6  

>gi|239755538 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 114

 Score =  234 bits (596), Expect = 1e-62
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MAASGKLLPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRV 60
           MAASGKLLPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRV
Sbjct: 1   MAASGKLLPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRV 60

Query: 61  QDTSAHPHSAWHRSCGISPQRTVSTLERLKLRGCANSPTFAGPLAGDLVLALPQ 114
           QDTSAHPHSAWHRSCGISPQRTVSTLERLKLRGCANSPTFAGPLAGDLVLALPQ
Sbjct: 61  QDTSAHPHSAWHRSCGISPQRTVSTLERLKLRGCANSPTFAGPLAGDLVLALPQ 114


>gi|239749994 PREDICTED: hypothetical protein XP_002347233 [Homo
           sapiens]
          Length = 114

 Score =  234 bits (596), Expect = 1e-62
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MAASGKLLPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRV 60
           MAASGKLLPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRV
Sbjct: 1   MAASGKLLPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRV 60

Query: 61  QDTSAHPHSAWHRSCGISPQRTVSTLERLKLRGCANSPTFAGPLAGDLVLALPQ 114
           QDTSAHPHSAWHRSCGISPQRTVSTLERLKLRGCANSPTFAGPLAGDLVLALPQ
Sbjct: 61  QDTSAHPHSAWHRSCGISPQRTVSTLERLKLRGCANSPTFAGPLAGDLVLALPQ 114


>gi|239744305 PREDICTED: hypothetical protein XP_002343094 [Homo
           sapiens]
          Length = 114

 Score =  234 bits (596), Expect = 1e-62
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MAASGKLLPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRV 60
           MAASGKLLPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRV
Sbjct: 1   MAASGKLLPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRV 60

Query: 61  QDTSAHPHSAWHRSCGISPQRTVSTLERLKLRGCANSPTFAGPLAGDLVLALPQ 114
           QDTSAHPHSAWHRSCGISPQRTVSTLERLKLRGCANSPTFAGPLAGDLVLALPQ
Sbjct: 61  QDTSAHPHSAWHRSCGISPQRTVSTLERLKLRGCANSPTFAGPLAGDLVLALPQ 114


>gi|192807286 zinc finger and BTB domain containing 4 [Homo
          sapiens]
          Length = 1013

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 9  PIPLPPTTRNKYPAPRSTPAATQSSS 34
          P+PLPP T    P P +T AA+ SSS
Sbjct: 64 PLPLPPATGGAAPNPATTTAASSSSS 89


>gi|192807284 zinc finger and BTB domain containing 4 [Homo
          sapiens]
          Length = 1013

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 9  PIPLPPTTRNKYPAPRSTPAATQSSS 34
          P+PLPP T    P P +T AA+ SSS
Sbjct: 64 PLPLPPATGGAAPNPATTTAASSSSS 89


>gi|239753240 PREDICTED: hypothetical protein XP_002345595 [Homo
           sapiens]
          Length = 180

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 17  RNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRVQDTSAHPH----SAWH 72
           R K P       +T +         GHRK   LG     G+ RV+ T   PH    S   
Sbjct: 53  RTKSPVSAQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRST 112

Query: 73  RSCGISPQRTVSTLERLK----LRGCANSP 98
           RS   SP+RT   L  +     +R CA  P
Sbjct: 113 RSATRSPRRTGRWLNTMPSWNVVRLCAMQP 142


>gi|239747803 PREDICTED: hypothetical protein XP_002348320 [Homo
           sapiens]
          Length = 180

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 17  RNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRVQDTSAHPH----SAWH 72
           R K P       +T +         GHRK   LG     G+ RV+ T   PH    S   
Sbjct: 53  RTKSPVSAQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRST 112

Query: 73  RSCGISPQRTVSTLERLK----LRGCANSP 98
           RS   SP+RT   L  +     +R CA  P
Sbjct: 113 RSATRSPRRTGRWLNTMPSWNVVRLCAMQP 142


>gi|239741677 PREDICTED: hypothetical protein XP_002342280 [Homo
           sapiens]
          Length = 180

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 17  RNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRVQDTSAHPH----SAWH 72
           R K P       +T +         GHRK   LG     G+ RV+ T   PH    S   
Sbjct: 53  RTKSPVSAQPSGSTAAHVGLCSSRSGHRKGGRLGTDTHAGSRRVKPTRRPPHQPLSSRST 112

Query: 73  RSCGISPQRTVSTLERLK----LRGCANSP 98
           RS   SP+RT   L  +     +R CA  P
Sbjct: 113 RSATRSPRRTGRWLNTMPSWNVVRLCAMQP 142


>gi|4503595 eosinophil peroxidase [Homo sapiens]
          Length = 715

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)

Query: 21  PAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNL-RVQDTSAHPHSAWHRSCGISP 79
           PA  +   A     LR RLF   R+   +G  +   N+ R +D     ++AW R CG+S 
Sbjct: 526 PAKLNRQDAMLVDELRDRLF---RQVRRIGLDLAALNMQRSRDHGLPGYNAWRRFCGLSQ 582

Query: 80  QRTVSTLERL 89
            R ++ L R+
Sbjct: 583 PRNLAQLSRV 592


>gi|238859651 pleckstrin homology domain containing family A member
           4 isoform 1 [Homo sapiens]
          Length = 779

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)

Query: 3   ASGKLLP-IPLPPT--TRNKYPAPRSTPAATQSSS 34
           + G  LP +PLPP+  TR + P PRS P A   S+
Sbjct: 698 SQGDPLPGVPLPPSDPTRQETPPPRSPPVANSGST 732


>gi|145301567 hypothetical protein LOC56006 [Homo sapiens]
          Length = 520

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 3/105 (2%)

Query: 13  PPTTRNKYPAPRSTPAATQS-SSLRMRLFQGHRKEENLGQMVREGNLRVQDTSAHPHSAW 71
           PP  R+K P P + PAA  + + L   +     +EE  G +   G    + T+  P +A 
Sbjct: 71  PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAP 130

Query: 72  HRSCGISP-QRTVSTLERLKLRGCAN-SPTFAGPLAGDLVLALPQ 114
               G    QR    + +++ RG    +P    P+ G   L  P+
Sbjct: 131 APPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPE 175


>gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]
          Length = 609

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 10/100 (10%)

Query: 11  PLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRVQDTSAHPHSA 70
           P P TT         TP A  +++  +      R+   L Q+VR+G+ R     +  +S 
Sbjct: 264 PTPATTSPGEKGEAGTPVAAGTTAAAIP-----RRHAPLEQLVRQGSFRGFPALSQKNSP 318

Query: 71  WHRSCGISPQRTVSTLER---LKLRGCANSPTFAGPLAGD 107
           + R   +      STL+R    +++G    P    P AGD
Sbjct: 319 FKRQLSLRLNELPSTLQRRTDFQVKGTV--PEMEPPGAGD 356


>gi|74271816 radical fringe [Homo sapiens]
          Length = 331

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 7  LLPIPLPPT---TRNKYPAPRSTPAATQSSSLR 36
          LLP+PLP      R   PAPR+ P+   + SLR
Sbjct: 24 LLPLPLPRAPAPARTPAPAPRAPPSRPAAPSLR 56


>gi|126366080 regulator of G-protein signaling 9 isoform 2 [Homo
           sapiens]
          Length = 671

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 44  RKEENLGQMVREGNLRVQDTSAHPHSAWHRSCGISPQ--RTVSTLERLKLRGCANSPTFA 101
           +K E  G M   G    + + A   ++W RS   +P   R   +  R   RGC  SP FA
Sbjct: 535 QKGECSGSMAPRGPSVTESSEASLDTSWPRSRPRAPPKARMALSFSRFLRRGCLASPVFA 594


>gi|126365761 regulator of G-protein signaling 9 isoform 1 [Homo
           sapiens]
          Length = 674

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 44  RKEENLGQMVREGNLRVQDTSAHPHSAWHRSCGISPQ--RTVSTLERLKLRGCANSPTFA 101
           +K E  G M   G    + + A   ++W RS   +P   R   +  R   RGC  SP FA
Sbjct: 538 QKGECSGSMAPRGPSVTESSEASLDTSWPRSRPRAPPKARMALSFSRFLRRGCLASPVFA 597


>gi|29366828 synaptotagmin XII [Homo sapiens]
          Length = 421

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 16/45 (35%), Positives = 19/45 (42%)

Query: 27  PAATQSSSLRMRLFQGHRKEENLGQMVREGNLRVQDTSAHPHSAW 71
           P A +  SLR  +F     E N+   V E  L V D    P S W
Sbjct: 227 PTALEEKSLRFSVFGIDEDERNVSTGVVELKLSVLDLPLQPFSGW 271


>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/48 (31%), Positives = 17/48 (35%)

Query: 9   PIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREG 56
           P P P       PAP   P A    S      QG R +E L   +  G
Sbjct: 187 PAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSG 234


>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/48 (31%), Positives = 17/48 (35%)

Query: 9   PIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREG 56
           P P P       PAP   P A    S      QG R +E L   +  G
Sbjct: 187 PAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSG 234


>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
           sapiens]
          Length = 316

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/48 (31%), Positives = 17/48 (35%)

Query: 9   PIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREG 56
           P P P       PAP   P A    S      QG R +E L   +  G
Sbjct: 198 PAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSG 245


>gi|59806363 hypothetical protein LOC9729 [Homo sapiens]
          Length = 694

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 8   LPIPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEENLGQMVREGNLRVQDTSAHP 67
           +P+P+     N  P  +ST          +R  QGH    +   M+ E + R  + S  P
Sbjct: 501 MPVPMENVPDN--PTKKSTTGL-------VRQMQGHLSPRSYRNMLHEHDWRPSNLSGRP 551

Query: 68  HSAWHRSCGISPQRTVSTLERLKLRGCANSPTF 100
            SA  RS     ++ + T E        NS  F
Sbjct: 552 RSADPRSNYGVVEKLLKTYETATESALQNSKCF 584


>gi|7662092 zinc finger protein 536 [Homo sapiens]
          Length = 1300

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 15  TTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEEN 48
           T    Y  P    A TQS+SL+  L + HR+ +N
Sbjct: 774 TGEKPYKCPHCDYAGTQSASLKYHLERHHRERQN 807


>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
          Length = 548

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 5/40 (12%)

Query: 9   PIPLPPTTRNKYPAP-----RSTPAATQSSSLRMRLFQGH 43
           P P PP++      P     RS PAA  + ++R+R F+ H
Sbjct: 508 PPPPPPSSSMASSTPLPWQQRSLPAAAMARAMRVRTFRAH 547


>gi|170650672 Leber congenital amaurosis 5 [Homo sapiens]
          Length = 697

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 10  IPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEE-----NLGQMVREGNLR 59
           +PL P   +K  +P  +P   + S    RLF GH  ++       G+    GN+R
Sbjct: 489 LPLLPDFESKLHSPERSPKTYRFSESSERLFNGHHLQDISFSTPKGEGQNSGNVR 543


>gi|170650670 Leber congenital amaurosis 5 [Homo sapiens]
          Length = 697

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 10  IPLPPTTRNKYPAPRSTPAATQSSSLRMRLFQGHRKEE-----NLGQMVREGNLR 59
           +PL P   +K  +P  +P   + S    RLF GH  ++       G+    GN+R
Sbjct: 489 LPLLPDFESKLHSPERSPKTYRFSESSERLFNGHHLQDISFSTPKGEGQNSGNVR 543


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
          sapiens]
          Length = 483

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 8  LPIPLPPTTRNKYPAPRSTPAATQSSSLR 36
          LP P PP      P P + P +T +SSLR
Sbjct: 11 LPPPPPPLGAPPPPPPSAPPVSTDTSSLR 39


>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
            sapiens]
          Length = 1133

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)

Query: 74   SCG-ISPQRTVSTLERLKLRGCANSP 98
            SCG ++P+RT+S ++ L + G A+SP
Sbjct: 989  SCGSLTPERTMSPIQVLAVTGSASSP 1014


>gi|109659849 filamin A interacting protein 1-like isoform 2 [Homo
           sapiens]
          Length = 893

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)

Query: 74  SCG-ISPQRTVSTLERLKLRGCANSP 98
           SCG ++P+RT+S ++ L + G A+SP
Sbjct: 749 SCGSLTPERTMSPIQVLAVTGSASSP 774


>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
            sapiens]
          Length = 1135

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)

Query: 74   SCG-ISPQRTVSTLERLKLRGCANSP 98
            SCG ++P+RT+S ++ L + G A+SP
Sbjct: 989  SCGSLTPERTMSPIQVLAVTGSASSP 1014


>gi|239740928 PREDICTED: hypothetical protein XP_002344099 [Homo
          sapiens]
          Length = 82

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 42 GHRKEENL---GQMVREGNLRVQDTSAHPHSAWHRSCGISPQRT 82
          G+R+++      Q+ +   + V   S  P +AW+RSC   P  T
Sbjct: 22 GYREKQQWHRSSQLDKNPGVSVVMLSVRPMTAWNRSCAAGPDTT 65


>gi|45331217 zinc finger protein 526 [Homo sapiens]
          Length = 670

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 32/129 (24%), Positives = 43/129 (33%), Gaps = 35/129 (27%)

Query: 8   LPIPLPPTTRNKYPAPRS-----------------TPA------ATQSSSLRMRLFQGHR 44
           +P PLPP T    P+P S                 TP        T   SL      G  
Sbjct: 173 VPPPLPPPTPLPPPSPPSEVKMEPYECPECSTLCATPEEFLEHQGTHFDSLEKEERNGLE 232

Query: 45  KEENLGQMVREGNLRVQDTSAHPH------------SAWHRSCGISPQRTVSTLERLKLR 92
           +EE   +   E +  ++D  A               + W + CG  PQ   S   R + R
Sbjct: 233 EEEEDDEEDEEDDEEMEDEEAMAEVGDDAVGGDESTAGWAQGCGDCPQHQPSAGARRQHR 292

Query: 93  GCANSPTFA 101
             A+SP  A
Sbjct: 293 RTAHSPASA 301


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.130    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,969,136
Number of Sequences: 37866
Number of extensions: 214814
Number of successful extensions: 1118
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1068
Number of HSP's gapped (non-prelim): 65
length of query: 114
length of database: 18,247,518
effective HSP length: 84
effective length of query: 30
effective length of database: 15,066,774
effective search space: 452003220
effective search space used: 452003220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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