Guide to the Human Genome
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Name: ZNF536 Sequence: fasta or formatted (1300aa) NCBI GI: 7662092
Description:

zinc finger protein 536

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         92           3
 C cysteine            2.4         31           2
 D aspartate           5.5         71           2
 E glutamate           6.7         87           3
 F phenylalanine       2.7         35           1
 G glycine             8.5        111           3
 H histidine           4.2         54           2
 I isoleucine          2.1         27           1
 K lysine              7.2         93           2
 L leucine             9.5        124           2
 M methionine          2.9         38           2
 N asparagine          3.3         43           2
 P proline             7.0         91           3
 Q glutamine           5.5         72           2
 R arginine            4.5         59           2
 S serine             11.2        145           3
 T threonine           3.3         43           2
 V valine              4.4         57           3
 W tryptophan          0.5          7           1
 Y tyrosine            1.5         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 536 
ZNF516                0.125   zinc finger protein 516 
ZNF217                0.092   zinc finger protein 217 
ZNF219                0.083   zinc finger protein 219 
ZNF219                0.083   zinc finger protein 219 
ZNF219                0.083   zinc finger protein 219 
ZNF236                0.034   zinc finger protein 236 
ZNF227                0.029   zinc finger protein 227 
REPIN1                0.029   replication initiator 1 isoform 1 
REPIN1                0.029   replication initiator 1 isoform 1 
REPIN1                0.029   replication initiator 1 isoform 3 
REPIN1                0.029   replication initiator 1 isoform 1 
ZNF229                0.027   zinc finger protein 229 
ZSCAN10               0.027   zinc finger and SCAN domain containing 10 
SALL4                 0.027   sal-like 4 
ZNF225                0.027   zinc finger protein 225 
ZNF502                0.026   zinc finger protein 502 
ZNF502                0.026   zinc finger protein 502 
ZNF502                0.026   zinc finger protein 502 
ZNF169                0.025   zinc finger protein 169 
ZNF467                0.025   zinc finger protein 467 
ZNF7                  0.025   zinc finger protein 7 
ZNF341                0.025   zinc finger protein 341 
ZNF260                0.024   zinc finger protein 260 
ZNF133                0.024   zinc finger protein 133 
ZNF133                0.024   zinc finger protein 133 
ZNF786                0.024   zinc finger protein 786 
ZNF567                0.024   zinc finger protein 567 
ZNF775                0.024   zinc finger protein 775 
ZNF90                 0.024   zinc finger protein 90 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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