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Search of human proteins with 239744003
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
(446 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 905 0.0
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 905 0.0
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 539 e-153
gi|239753416 PREDICTED: hypothetical protein XP_002345645 [Homo ... 59 1e-08
gi|239747980 PREDICTED: hypothetical protein XP_002346488 [Homo ... 59 1e-08
gi|239741880 PREDICTED: hypothetical protein XP_002342332 [Homo ... 59 1e-08
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 52 8e-07
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 50 4e-06
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 49 1e-05
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 48 2e-05
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 48 2e-05
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 48 2e-05
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 48 2e-05
gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precurs... 47 4e-05
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo ... 45 1e-04
gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo ... 45 1e-04
gi|119395750 keratin 1 [Homo sapiens] 45 2e-04
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 45 2e-04
gi|28269693 xylosyltransferase I [Homo sapiens] 45 2e-04
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 44 2e-04
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 44 2e-04
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 44 3e-04
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 44 3e-04
gi|48762934 alpha 2 type I collagen [Homo sapiens] 43 5e-04
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 905 bits (2338), Expect = 0.0
Identities = 446/446 (100%), Positives = 446/446 (100%)
Query: 1 MGLGSSLDDPYKPKQLPVGGNLNVKGHLNIEQVLVFTKVTSHFLLHILNLILQAANSVLV 60
MGLGSSLDDPYKPKQLPVGGNLNVKGHLNIEQVLVFTKVTSHFLLHILNLILQAANSVLV
Sbjct: 1 MGLGSSLDDPYKPKQLPVGGNLNVKGHLNIEQVLVFTKVTSHFLLHILNLILQAANSVLV 60
Query: 61 VSSFNGKVLFHFTHLAFQGLILQGVLGSHTFILLTYVTQGSREVRLGNIHIDLDMLFLNL 120
VSSFNGKVLFHFTHLAFQGLILQGVLGSHTFILLTYVTQGSREVRLGNIHIDLDMLFLNL
Sbjct: 61 VSSFNGKVLFHFTHLAFQGLILQGVLGSHTFILLTYVTQGSREVRLGNIHIDLDMLFLNL 120
Query: 121 SLQLLDFLQKEQTDGFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFL 180
SLQLLDFLQKEQTDGFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFL
Sbjct: 121 SLQLLDFLQKEQTDGFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFL 180
Query: 181 LPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLL 240
LPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLL
Sbjct: 181 LPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLL 240
Query: 241 QEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRG 300
QEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRG
Sbjct: 241 QEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRG 300
Query: 301 ARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHG 360
ARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHG
Sbjct: 301 ARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHG 360
Query: 361 PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGA 420
PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGA
Sbjct: 361 PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGA 420
Query: 421 VFITPLGKRVPSHCHPSRGARQPIGT 446
VFITPLGKRVPSHCHPSRGARQPIGT
Sbjct: 421 VFITPLGKRVPSHCHPSRGARQPIGT 446
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 905 bits (2338), Expect = 0.0
Identities = 446/446 (100%), Positives = 446/446 (100%)
Query: 1 MGLGSSLDDPYKPKQLPVGGNLNVKGHLNIEQVLVFTKVTSHFLLHILNLILQAANSVLV 60
MGLGSSLDDPYKPKQLPVGGNLNVKGHLNIEQVLVFTKVTSHFLLHILNLILQAANSVLV
Sbjct: 1 MGLGSSLDDPYKPKQLPVGGNLNVKGHLNIEQVLVFTKVTSHFLLHILNLILQAANSVLV 60
Query: 61 VSSFNGKVLFHFTHLAFQGLILQGVLGSHTFILLTYVTQGSREVRLGNIHIDLDMLFLNL 120
VSSFNGKVLFHFTHLAFQGLILQGVLGSHTFILLTYVTQGSREVRLGNIHIDLDMLFLNL
Sbjct: 61 VSSFNGKVLFHFTHLAFQGLILQGVLGSHTFILLTYVTQGSREVRLGNIHIDLDMLFLNL 120
Query: 121 SLQLLDFLQKEQTDGFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFL 180
SLQLLDFLQKEQTDGFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFL
Sbjct: 121 SLQLLDFLQKEQTDGFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFL 180
Query: 181 LPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLL 240
LPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLL
Sbjct: 181 LPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLL 240
Query: 241 QEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRG 300
QEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRG
Sbjct: 241 QEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRG 300
Query: 301 ARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHG 360
ARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHG
Sbjct: 301 ARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHG 360
Query: 361 PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGA 420
PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGA
Sbjct: 361 PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGA 420
Query: 421 VFITPLGKRVPSHCHPSRGARQPIGT 446
VFITPLGKRVPSHCHPSRGARQPIGT
Sbjct: 421 VFITPLGKRVPSHCHPSRGARQPIGT 446
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 539 bits (1389), Expect = e-153
Identities = 266/278 (95%), Positives = 266/278 (95%), Gaps = 2/278 (0%)
Query: 171 APSTAFPSFLLPP--GLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAH 228
AP P L P PPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAH
Sbjct: 20 APPQPQPRSPLSPWQASPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAH 79
Query: 229 DVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPH 288
DVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPH
Sbjct: 80 DVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPH 139
Query: 289 PGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARA 348
PGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARA
Sbjct: 140 PGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARA 199
Query: 349 AEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRS 408
AEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRS
Sbjct: 200 AEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRS 259
Query: 409 ESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT 446
ESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT
Sbjct: 260 ESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIGT 297
>gi|239753416 PREDICTED: hypothetical protein XP_002345645 [Homo
sapiens]
Length = 176
Score = 58.5 bits (140), Expect = 1e-08
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 232 GQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQ 277
G + +LLLQEAHL+DVVGEAVI+LLQLHLLVGA +L V VGQ
Sbjct: 131 GGERRVLLLQEAHLLDVVGEAVIELLQLHLLVGARGQKLLVHRVGQ 176
Score = 56.2 bits (134), Expect = 6e-08
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 15 QLPVGGNLNVKGHLNIEQVLVFTKVTSHFLLHILNLILQAANSVL 59
QLPVGGNL+++GHL++EQVLV ++ H +L + + +LQA N VL
Sbjct: 21 QLPVGGNLHIQGHLHVEQVLVLAQMAGHLILEVPDFLLQARNVVL 65
>gi|239747980 PREDICTED: hypothetical protein XP_002346488 [Homo
sapiens]
Length = 176
Score = 58.5 bits (140), Expect = 1e-08
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 232 GQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQ 277
G + +LLLQEAHL+DVVGEAVI+LLQLHLLVGA +L V VGQ
Sbjct: 131 GGERRVLLLQEAHLLDVVGEAVIELLQLHLLVGARGQKLLVHRVGQ 176
Score = 56.2 bits (134), Expect = 6e-08
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 15 QLPVGGNLNVKGHLNIEQVLVFTKVTSHFLLHILNLILQAANSVL 59
QLPVGGNL+++GHL++EQVLV ++ H +L + + +LQA N VL
Sbjct: 21 QLPVGGNLHIQGHLHVEQVLVLAQMAGHLILEVPDFLLQARNVVL 65
>gi|239741880 PREDICTED: hypothetical protein XP_002342332 [Homo
sapiens]
Length = 176
Score = 58.5 bits (140), Expect = 1e-08
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 232 GQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQ 277
G + +LLLQEAHL+DVVGEAVI+LLQLHLLVGA +L V VGQ
Sbjct: 131 GGERRVLLLQEAHLLDVVGEAVIELLQLHLLVGARGQKLLVHRVGQ 176
Score = 56.2 bits (134), Expect = 6e-08
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 15 QLPVGGNLNVKGHLNIEQVLVFTKVTSHFLLHILNLILQAANSVL 59
QLPVGGNL+++GHL++EQVLV ++ H +L + + +LQA N VL
Sbjct: 21 QLPVGGNLHIQGHLHVEQVLVLAQMAGHLILEVPDFLLQARNVVL 65
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 52.4 bits (124), Expect = 8e-07
Identities = 47/131 (35%), Positives = 55/131 (41%), Gaps = 28/131 (21%)
Query: 288 HPG-HAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAG------A 340
HPG + AP A A G+++A AAA A A +A A GA AP +
Sbjct: 340 HPGLYQAPAA----AAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSS 395
Query: 341 RPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAA 400
+ A A AA A+G RG GG G GG G G G GGGS
Sbjct: 396 QSAAAAAAAAAAALGSRG---GGGGGGG--------------GGGGGGGGAGAGGGSDFG 438
Query: 401 SLARGPRSESG 411
A PRSESG
Sbjct: 439 CSAAAPRSESG 449
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 50.1 bits (118), Expect = 4e-06
Identities = 74/272 (27%), Positives = 89/272 (32%), Gaps = 69/272 (25%)
Query: 186 PPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHL 245
P P W + PG P PSR A+L D GQQ+
Sbjct: 18 PVNHGPLLWTWTAPPGAPILAAP-PSRAHPRVRIASLHRFRIEDAHGQQE---------- 66
Query: 246 VDVVGEAVIQLLQLHLLVGAGVLELGVDGVG----------------QREVHRVLQE-PH 288
V GE + +L G E+ V G G R RVL P
Sbjct: 67 --VRGEGTYWAVGKGVLSGRTWCEMLVAGAGGSQKAGRPHFQGRVDVMRRDPRVLPGIPA 124
Query: 289 PGH-----AAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPA 343
PG AP+AHG GA G A RG + A +AA G G ++ G P
Sbjct: 125 PGKHHRVSGAPRAHGTGAHGTGALRGDFRQCREPARTPQAASRDGDGASPALSAPGREPG 184
Query: 344 RGARAAEH----------PAVGGRGHGPGGHGCGG--WRW---PGRRRWRGLAPGEEANE 388
RG R A P GH H +RW P RR W E
Sbjct: 185 RGGRPARRTTQRAASSSLPPRRSEGHPDAPHRSPRPLYRWLGPPPRRDW--------MRE 236
Query: 389 GAVGVGGG-----------SAAASLARGPRSE 409
VG GGG A +++ GPR E
Sbjct: 237 DGVGAGGGPQEPRFPLRRREARSAVVAGPRRE 268
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 48.5 bits (114), Expect = 1e-05
Identities = 47/154 (30%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Query: 276 GQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRS-- 333
G+R+ HR P P ++ G + R RG +AA G G R ++ G G +
Sbjct: 220 GRRKKHR---RPKPAAGGAKSRRGGGKKPQKQRRRGQKAATG-GKSRVGKSRGGGDKKLR 275
Query: 334 ----HVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGG----WRWPGRR-RWRGLAPGE 384
+ A AGA+ A A E PA GRG G G GG W G++ R RG +
Sbjct: 276 RQGQNAALAGAKRRGAATAGEKPAAKGRG-GRGPKSLGGQNPRWGRGGKKPRRRGQKATK 334
Query: 385 EANEGAVGVGGGSAAASL--ARGPRSESGRGLDP 416
A G GGG A++ + + + RG P
Sbjct: 335 AAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKP 368
Score = 40.0 bits (92), Expect = 0.004
Identities = 46/161 (28%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 265 AGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHG--RGARGIHAARGRGVEAAAGAG-AQ 321
AG VGQ R ++P A + G A GI+ + RG + G
Sbjct: 669 AGSESSAAAAVGQEAEAR--KKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGG 726
Query: 322 RAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLA 381
A++ G+GG GA+ G +AA + HG GG +R RG
Sbjct: 727 GGAKSRGSGGAKSRGSGGAKSRSGKKAA-----ASKSHGGGG----------AKRRRGGG 771
Query: 382 PGEEANEGAVGVGGGSAAASLARGP---RSESGRGLDPAEG 419
+ E AV GG AAA+ + P +S GRG A G
Sbjct: 772 AKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAAAG 812
Score = 38.5 bits (88), Expect = 0.012
Identities = 41/146 (28%), Positives = 50/146 (34%), Gaps = 23/146 (15%)
Query: 285 QEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPAR 344
Q P G + RG + AA G G Q+ A VG R G +P R
Sbjct: 314 QNPRWGRGGKKPRRRGQKATKAA---AAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRR 370
Query: 345 GARAAEHPAVGGRGHGPG-------GHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGS 397
+A G G G G G RW RR AP + GGGS
Sbjct: 371 QKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPR------GGGS 424
Query: 398 -------AAASLARGPRSESGRGLDP 416
A+ +RG +S SG G P
Sbjct: 425 KKPRRRGPKAAKSRGGKSRSGGGKKP 450
Score = 38.1 bits (87), Expect = 0.016
Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 10/144 (6%)
Query: 299 RGARGIHAARGRGVEAA-AGAGAQRAAQ-AVGAGGRSHVAPAGARPARGARAAEHPAVGG 356
+ A G AR RG + A AG A++ Q A GAGG + + A AA ++GG
Sbjct: 63 KAAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAA----AAGTKSLGG 118
Query: 357 RGHGPGGHGCGGWRWPGRR-RWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLD 415
RG P G ++ RWR + A G+ G G+ A+ A G +S+ G
Sbjct: 119 RGRKPRRRGQKAAATGSKKPRWRAQ---KSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQ 175
Query: 416 PAEGAVFITPLGKRVPSHCHPSRG 439
A A + GK+ SRG
Sbjct: 176 KAAAAGAKSRSGKKPRRRGAKSRG 199
Score = 36.6 bits (83), Expect = 0.047
Identities = 45/164 (27%), Positives = 56/164 (34%), Gaps = 24/164 (14%)
Query: 296 AHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVG 355
A G +RG + R + AA AA AVG + P R ++ AVG
Sbjct: 648 ATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVG 707
Query: 356 -------------GRGHGPGG---HGCGGWRWPGRRRWRGLAPGEEANEGAVGV--GGGS 397
G+ G GG G GG + R G A + A GGG
Sbjct: 708 INPWQRRGKKPRLGKSRGGGGAKSRGSGG----AKSRGSGGAKSRSGKKAAASKSHGGGG 763
Query: 398 AAASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 441
A G +S SG A G GK+ P SRG R
Sbjct: 764 AKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPR--VKSRGGR 805
Score = 36.2 bits (82), Expect = 0.062
Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 10/127 (7%)
Query: 294 PQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAV-------GAGGRSHVAPAGARPARGA 346
P+ G +RG +GR EA + G R + AGG G +P +
Sbjct: 190 PRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQR 249
Query: 347 RAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASL-ARG 405
R + A GG+ G GG RR+ + A GA G AA RG
Sbjct: 250 RRGQKAATGGKSR--VGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEKPAAKGRGGRG 307
Query: 406 PRSESGR 412
P+S G+
Sbjct: 308 PKSLGGQ 314
Score = 33.9 bits (76), Expect = 0.31
Identities = 34/116 (29%), Positives = 43/116 (37%), Gaps = 20/116 (17%)
Query: 293 APQAHGRGA-------RGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGAR---- 341
AP A RG RG AA+ RG ++ +G G + + G R A AGA
Sbjct: 414 APAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGGG--KKPRRRGQKARQKAAEAGAESRGD 471
Query: 342 PARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGS 397
+G + A RG G H G+ WR E A E A G S
Sbjct: 472 KKQGRQKASAAGTKSRGGGLKSHS-------GKNLWRRGQKAEAAGEKATAAGAKS 520
Score = 33.9 bits (76), Expect = 0.31
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 16/143 (11%)
Query: 292 AAPQAHGRGAR--GIHAARGRGVEAAAGAGAQRA--AQAVGAGGRSHVAPAGARPARGAR 347
AA + G G + G A ++ +G G ++A +A G G +S P R + A
Sbjct: 583 AAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGTGAKSRKKP-WRRGQKDAA 641
Query: 348 AAEHP-AVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGP 406
AAE A G G GG + RW+ A + A VG + A R
Sbjct: 642 AAEKAWATGATSRGSGGK---------QPRWQKPAAAGSESSAAAAVGQEAEARKKPRRR 692
Query: 407 RSESGRGLDPAEGAVFITPLGKR 429
R++S RG AV I P +R
Sbjct: 693 RAKS-RGDGGQNAAVGINPWQRR 714
Score = 32.7 bits (73), Expect = 0.68
Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 292 AAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAP----AGARPARGAR 347
AA + RGA AA GV++ G Q+AA A GA RS P A +R +
Sbjct: 146 AAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAA-AAGAKSRSGKKPRRRGAKSRGDEDKK 204
Query: 348 AAEHPAVGGRGHGPGGH---------GCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSA 398
+ A G GG GG + RR G P ++ G GG +
Sbjct: 205 GRQREAKSRFGKTRGGRRKKHRRPKPAAGGAK---SRRGGGKKPQKQRRRGQKAATGGKS 261
Query: 399 AASLARG 405
+RG
Sbjct: 262 RVGKSRG 268
Score = 32.7 bits (73), Expect = 0.68
Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 18/112 (16%)
Query: 264 GAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRA 323
G G G G R AA ++HG G A R RG GA ++
Sbjct: 726 GGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGG----AKRRRG----GGAKSRSG 777
Query: 324 AQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRR 375
+AV AGG+ A G +P P V RG G G G + P RR
Sbjct: 778 EKAVTAGGQKAAAAGGKKP---------PRVKSRG-GRGQKAAAGGKKPLRR 819
Score = 29.3 bits (64), Expect = 7.6
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 307 ARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGC 366
+RG G+++ +G R Q A G A R + PAV G GG
Sbjct: 486 SRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGS-- 543
Query: 367 GGWRWPGRRRWRGLAPGEEANEGA---VGVGGG---------SAAASLARG 405
R+R + +A G ++ G GGG +AAA+ RG
Sbjct: 544 -----KSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRG 589
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 48.1 bits (113), Expect = 2e-05
Identities = 91/320 (28%), Positives = 117/320 (36%), Gaps = 58/320 (18%)
Query: 148 HG--GRTDLQDSPAIPAP----EGPSLCLAPSTAFPSFLL-PPGLPPATSPRAWQLSRGP 200
HG G + PA+ P EGP P A P+ ++ PPGL T P RGP
Sbjct: 431 HGAYGEKGQKGEPAVVEPGMLVEGP-----PGPAGPAGIMGPPGLQGPTGPPGDPGDRGP 485
Query: 201 GGRSPLPPAPS-RGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQL 259
GR LP A GP G L+LP + G + + QEA +A++Q ++
Sbjct: 486 PGRPGLPGADGLPGPP---GTMLMLPFRYGGDGSKGPTISAQEAQ-----AQAILQQARI 537
Query: 260 HLLVGAGVLEL-----GVDGVGQREVHRVLQEPHPG-----HAAPQAHGR-GARGIHAA- 307
L G + L V G G +P P P G+ G RG A
Sbjct: 538 ALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGAD 597
Query: 308 RGRGVEAAAGAGAQRAAQAV-----GAGGRSHVAPAG--ARPARGARAAEHPAVGGRGHG 360
GRG+ GA R + G R P G P E +G RG
Sbjct: 598 GGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGL- 656
Query: 361 PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGG-----GSAAASLARGPRSESG---- 411
PG G G P RG PG G GV G G+ GP + G
Sbjct: 657 PGEAGPRGLLGP-----RG-TPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGP 710
Query: 412 RGLDPAEGAVFITPLGKRVP 431
+GL +G I P G++ P
Sbjct: 711 QGLPGPQGP--IGPPGEKGP 728
Score = 34.7 bits (78), Expect = 0.18
Identities = 47/167 (28%), Positives = 63/167 (37%), Gaps = 28/167 (16%)
Query: 289 PGHAAPQAHGRGARGIHAARG-RGVEAAAGAGAQRAAQAVGA-----GGRSHVAPAGARP 342
PG P + G RG+ A G RG++ + G + G R V G R
Sbjct: 762 PGPQGPIGYP-GPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRG 820
Query: 343 ARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLA--PGEEANEGAVGVGG--GSA 398
G + A G PG G G + G+ GL PG + +G+ G G G+
Sbjct: 821 EDGPEGPKGRA--GPTGDPGPSGQAGEK--GKLGVPGLPGYPGRQGPKGSTGFPGFPGAN 876
Query: 399 AASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIG 445
ARG + G P G+R P+ SRGAR P G
Sbjct: 877 GEKGARGVAGKPG-------------PRGQRGPTGPRGSRGARGPTG 910
Score = 32.7 bits (73), Expect = 0.68
Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 26/122 (21%)
Query: 286 EPHPGHAAPQAHGRGARGIHAARGR-------GVEAAAGAGAQRAAQAVGA-----GGRS 333
+P P A + G G+ GR G GA ++ A+ V G R
Sbjct: 836 DPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRG 895
Query: 334 HVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGV 393
P G+R ARG P G GP G PG R G + +G VG
Sbjct: 896 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGP-------PGER-------GPQGPQGPVGF 941
Query: 394 GG 395
G
Sbjct: 942 PG 943
Score = 32.7 bits (73), Expect = 0.68
Identities = 33/91 (36%), Positives = 38/91 (41%), Gaps = 24/91 (26%)
Query: 129 QKEQTD-GFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFLLPPGLPP 187
Q E+ D G GT G+ GG IP P GP L P PPGLP
Sbjct: 1479 QGEKGDRGLPGTQGSPGAKGDGG---------IPGPAGP---LGPPG-------PPGLPG 1519
Query: 188 ATSPRAWQLSRGPGGR---SPLP-PAPSRGP 214
P+ + S GP G+ S LP P S GP
Sbjct: 1520 PQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1550
Score = 31.6 bits (70), Expect = 1.5
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 21/122 (17%)
Query: 299 RGARGIHAARG-RGVEAAAGAGAQRA----AQAVGAGGR----SHVAPAGARPARGARAA 349
+GA G+ G +G G+ +R A +G GR PAG + A G +
Sbjct: 1050 QGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGP 1109
Query: 350 EHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSE 409
+ PA GR G G G P +PGE+ ++G +G G ++G + E
Sbjct: 1110 QGPA--GRDGVQGPVGLPGPAGPAG------SPGEDGDKGEIGEPGQKG----SKGDKGE 1157
Query: 410 SG 411
+G
Sbjct: 1158 NG 1159
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 48.1 bits (113), Expect = 2e-05
Identities = 91/320 (28%), Positives = 117/320 (36%), Gaps = 58/320 (18%)
Query: 148 HG--GRTDLQDSPAIPAP----EGPSLCLAPSTAFPSFLL-PPGLPPATSPRAWQLSRGP 200
HG G + PA+ P EGP P A P+ ++ PPGL T P RGP
Sbjct: 380 HGAYGEKGQKGEPAVVEPGMLVEGP-----PGPAGPAGIMGPPGLQGPTGPPGDPGDRGP 434
Query: 201 GGRSPLPPAPS-RGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQL 259
GR LP A GP G L+LP + G + + QEA +A++Q ++
Sbjct: 435 PGRPGLPGADGLPGPP---GTMLMLPFRYGGDGSKGPTISAQEAQ-----AQAILQQARI 486
Query: 260 HLLVGAGVLEL-----GVDGVGQREVHRVLQEPHPG-----HAAPQAHGR-GARGIHAA- 307
L G + L V G G +P P P G+ G RG A
Sbjct: 487 ALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGAD 546
Query: 308 RGRGVEAAAGAGAQRAAQAV-----GAGGRSHVAPAG--ARPARGARAAEHPAVGGRGHG 360
GRG+ GA R + G R P G P E +G RG
Sbjct: 547 GGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGL- 605
Query: 361 PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGG-----GSAAASLARGPRSESG---- 411
PG G G P RG PG G GV G G+ GP + G
Sbjct: 606 PGEAGPRGLLGP-----RG-TPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGP 659
Query: 412 RGLDPAEGAVFITPLGKRVP 431
+GL +G I P G++ P
Sbjct: 660 QGLPGPQGP--IGPPGEKGP 677
Score = 34.7 bits (78), Expect = 0.18
Identities = 47/167 (28%), Positives = 63/167 (37%), Gaps = 28/167 (16%)
Query: 289 PGHAAPQAHGRGARGIHAARG-RGVEAAAGAGAQRAAQAVGA-----GGRSHVAPAGARP 342
PG P + G RG+ A G RG++ + G + G R V G R
Sbjct: 711 PGPQGPIGYP-GPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRG 769
Query: 343 ARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLA--PGEEANEGAVGVGG--GSA 398
G + A G PG G G + G+ GL PG + +G+ G G G+
Sbjct: 770 EDGPEGPKGRA--GPTGDPGPSGQAGEK--GKLGVPGLPGYPGRQGPKGSTGFPGFPGAN 825
Query: 399 AASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIG 445
ARG + G P G+R P+ SRGAR P G
Sbjct: 826 GEKGARGVAGKPG-------------PRGQRGPTGPRGSRGARGPTG 859
Score = 32.7 bits (73), Expect = 0.68
Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 26/122 (21%)
Query: 286 EPHPGHAAPQAHGRGARGIHAARGR-------GVEAAAGAGAQRAAQAVGA-----GGRS 333
+P P A + G G+ GR G GA ++ A+ V G R
Sbjct: 785 DPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRG 844
Query: 334 HVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGV 393
P G+R ARG P G GP G PG R G + +G VG
Sbjct: 845 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGP-------PGER-------GPQGPQGPVGF 890
Query: 394 GG 395
G
Sbjct: 891 PG 892
Score = 32.7 bits (73), Expect = 0.68
Identities = 33/91 (36%), Positives = 38/91 (41%), Gaps = 24/91 (26%)
Query: 129 QKEQTD-GFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFLLPPGLPP 187
Q E+ D G GT G+ GG IP P GP L P PPGLP
Sbjct: 1428 QGEKGDRGLPGTQGSPGAKGDGG---------IPGPAGP---LGPPG-------PPGLPG 1468
Query: 188 ATSPRAWQLSRGPGGR---SPLP-PAPSRGP 214
P+ + S GP G+ S LP P S GP
Sbjct: 1469 PQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1499
Score = 31.6 bits (70), Expect = 1.5
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 21/122 (17%)
Query: 299 RGARGIHAARG-RGVEAAAGAGAQRA----AQAVGAGGR----SHVAPAGARPARGARAA 349
+GA G+ G +G G+ +R A +G GR PAG + A G +
Sbjct: 999 QGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGP 1058
Query: 350 EHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSE 409
+ PA GR G G G P +PGE+ ++G +G G ++G + E
Sbjct: 1059 QGPA--GRDGVQGPVGLPGPAGPAG------SPGEDGDKGEIGEPGQKG----SKGDKGE 1106
Query: 410 SG 411
+G
Sbjct: 1107 NG 1108
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 48.1 bits (113), Expect = 2e-05
Identities = 91/320 (28%), Positives = 117/320 (36%), Gaps = 58/320 (18%)
Query: 148 HG--GRTDLQDSPAIPAP----EGPSLCLAPSTAFPSFLL-PPGLPPATSPRAWQLSRGP 200
HG G + PA+ P EGP P A P+ ++ PPGL T P RGP
Sbjct: 419 HGAYGEKGQKGEPAVVEPGMLVEGP-----PGPAGPAGIMGPPGLQGPTGPPGDPGDRGP 473
Query: 201 GGRSPLPPAPS-RGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQL 259
GR LP A GP G L+LP + G + + QEA +A++Q ++
Sbjct: 474 PGRPGLPGADGLPGPP---GTMLMLPFRYGGDGSKGPTISAQEAQ-----AQAILQQARI 525
Query: 260 HLLVGAGVLEL-----GVDGVGQREVHRVLQEPHPG-----HAAPQAHGR-GARGIHAA- 307
L G + L V G G +P P P G+ G RG A
Sbjct: 526 ALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGAD 585
Query: 308 RGRGVEAAAGAGAQRAAQAV-----GAGGRSHVAPAG--ARPARGARAAEHPAVGGRGHG 360
GRG+ GA R + G R P G P E +G RG
Sbjct: 586 GGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGL- 644
Query: 361 PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGG-----GSAAASLARGPRSESG---- 411
PG G G P RG PG G GV G G+ GP + G
Sbjct: 645 PGEAGPRGLLGP-----RG-TPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGP 698
Query: 412 RGLDPAEGAVFITPLGKRVP 431
+GL +G I P G++ P
Sbjct: 699 QGLPGPQGP--IGPPGEKGP 716
Score = 34.7 bits (78), Expect = 0.18
Identities = 47/167 (28%), Positives = 63/167 (37%), Gaps = 28/167 (16%)
Query: 289 PGHAAPQAHGRGARGIHAARG-RGVEAAAGAGAQRAAQAVGA-----GGRSHVAPAGARP 342
PG P + G RG+ A G RG++ + G + G R V G R
Sbjct: 750 PGPQGPIGYP-GPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRG 808
Query: 343 ARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLA--PGEEANEGAVGVGG--GSA 398
G + A G PG G G + G+ GL PG + +G+ G G G+
Sbjct: 809 EDGPEGPKGRA--GPTGDPGPSGQAGEK--GKLGVPGLPGYPGRQGPKGSTGFPGFPGAN 864
Query: 399 AASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIG 445
ARG + G P G+R P+ SRGAR P G
Sbjct: 865 GEKGARGVAGKPG-------------PRGQRGPTGPRGSRGARGPTG 898
Score = 32.7 bits (73), Expect = 0.68
Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 26/122 (21%)
Query: 286 EPHPGHAAPQAHGRGARGIHAARGR-------GVEAAAGAGAQRAAQAVGA-----GGRS 333
+P P A + G G+ GR G GA ++ A+ V G R
Sbjct: 824 DPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRG 883
Query: 334 HVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGV 393
P G+R ARG P G GP G PG R G + +G VG
Sbjct: 884 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGP-------PGER-------GPQGPQGPVGF 929
Query: 394 GG 395
G
Sbjct: 930 PG 931
Score = 32.7 bits (73), Expect = 0.68
Identities = 33/91 (36%), Positives = 38/91 (41%), Gaps = 24/91 (26%)
Query: 129 QKEQTD-GFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFLLPPGLPP 187
Q E+ D G GT G+ GG IP P GP L P PPGLP
Sbjct: 1467 QGEKGDRGLPGTQGSPGAKGDGG---------IPGPAGP---LGPPG-------PPGLPG 1507
Query: 188 ATSPRAWQLSRGPGGR---SPLP-PAPSRGP 214
P+ + S GP G+ S LP P S GP
Sbjct: 1508 PQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1538
Score = 31.6 bits (70), Expect = 1.5
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 21/122 (17%)
Query: 299 RGARGIHAARG-RGVEAAAGAGAQRA----AQAVGAGGR----SHVAPAGARPARGARAA 349
+GA G+ G +G G+ +R A +G GR PAG + A G +
Sbjct: 1038 QGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGP 1097
Query: 350 EHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSE 409
+ PA GR G G G P +PGE+ ++G +G G ++G + E
Sbjct: 1098 QGPA--GRDGVQGPVGLPGPAGPAG------SPGEDGDKGEIGEPGQKG----SKGDKGE 1145
Query: 410 SG 411
+G
Sbjct: 1146 NG 1147
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 48.1 bits (113), Expect = 2e-05
Identities = 44/148 (29%), Positives = 53/148 (35%), Gaps = 34/148 (22%)
Query: 288 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGAR 347
H AP+AHG GA G A RG + A +AA G G ++ G P RG R
Sbjct: 121 HRVSGAPRAHGTGAHGTGALRGDFRQCREPARTPQAASRDGDGASPALSAPGREPGRGGR 180
Query: 348 AAEH----------PAVGGRGHGPGGHGCGG--WRW---PGRRRWRGLAPGEEANEGAVG 392
A P GH H +RW P RR W E VG
Sbjct: 181 PARRTTQRAASSSLPPRRSEGHPDAPHRSPRPLYRWLGPPPRRDW--------MREDGVG 232
Query: 393 VGGG-----------SAAASLARGPRSE 409
GGG A +++ GPR E
Sbjct: 233 AGGGPQEPRFPLRRREARSAVVAGPRRE 260
>gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precursor
[Homo sapiens]
Length = 864
Score = 47.0 bits (110), Expect = 4e-05
Identities = 81/325 (24%), Positives = 116/325 (35%), Gaps = 66/325 (20%)
Query: 138 GTSGTAQRGNHGGR-TDLQDSP---AIPAPEGPSLCLAPSTAFPSFLLPPGLPPATSPR- 192
G +G + G + T L+ SP A P+P P + PS P+ P SP
Sbjct: 12 GAAGAILCSSPGSQETFLRSSPLPLASPSPRDPKVSAPPSILEPA-------SPLNSPGT 64
Query: 193 --AWQLSR-GPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVV 249
+W S G GR G + + A + G Q + +L+
Sbjct: 65 EGSWLFSTCGASGRHGPTQTQCDGAYAGTSVVVTVGAAGQLRGVQLWRVPGPGQYLISAY 124
Query: 250 GEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVL-----QEPHPGHA------------ 292
G A + + HL GV + +G E +L ++ PG +
Sbjct: 125 GAAGGKGAKNHLSRAHGVFVSAIFSLGLGESLYILVGQQGEDACPGGSPESQLVCLGESR 184
Query: 293 APQAHGR--GARGIHAARGRGVEAAAGAGAQ-----RAAQ------AVGAGGRSHVAPAG 339
A + H G+ G+ +R G GA RA + A G GGR+++ P
Sbjct: 185 AVEEHAAMDGSEGVPGSRRWAGGGGGGGGATYVFRVRAGELEPLLVAAGGGGRAYLRPRD 244
Query: 340 -----ARPARGARAAEHPAVGGRGHGPGGHGCGGW--RWPGRRRWRGLAPGEEANEG--- 389
A P + +E P GGRG GG GGW R P + R L G E +G
Sbjct: 245 RGRTQASPEKLENRSEAPGSGGRGGAAGGG--GGWTSRAPSPQAGRSLQEGAEGGQGCSE 302
Query: 390 ---------AVGVGGGSAAASLARG 405
A G GGG A + G
Sbjct: 303 AWATLGWAAAGGFGGGGGACTAGGG 327
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 45.4 bits (106), Expect = 1e-04
Identities = 72/268 (26%), Positives = 91/268 (33%), Gaps = 65/268 (24%)
Query: 196 LSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVD--VVGEAV 253
+ RG GG P RG G L + VLG+ + A + V G
Sbjct: 722 IQRGRGGLGHRPLPGWRG----QGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGHVP 777
Query: 254 IQLLQLHLLVGAGVLELGV--------DGVGQREVHRVLQEPHPGHAAPQAHGRGA---- 301
++L + G G L G+ +G VL + H A A G GA
Sbjct: 778 VELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGG 837
Query: 302 ------------RGIHAARGR-GVEAAAGAGAQRAAQAVGAGGR---------------- 332
R + A R R G A A AG Q A G GGR
Sbjct: 838 PLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGA--GAGGGGRRVRHGHGHGAAVLQRA 895
Query: 333 -----SHVAP-AGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEA 386
H+AP A A A+G RAA+ GR H PG G P R G
Sbjct: 896 PCRQQRHLAPAAAAAAAQGVRAAQ-----GRAHRPGAQGA-----PSHRHRPGARGRRSR 945
Query: 387 NEGAVGVGGGSAAASLARGPRSESGRGL 414
AV + GG+ A A G R G+ +
Sbjct: 946 RRAAVALAGGAHPARAALGRRRGGGQAV 973
Score = 37.7 bits (86), Expect = 0.021
Identities = 47/145 (32%), Positives = 53/145 (36%), Gaps = 14/145 (9%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAV-GAGGRSHVAPAGARP------ 342
G HG GA + A R A A A AAQ V A GR+H A P
Sbjct: 878 GRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRP 937
Query: 343 -ARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGG-SAAA 400
ARG R+ AV G G H GRRR G A G A A GG
Sbjct: 938 GARGRRSRRRAAVALAG---GAHPARAAL--GRRRGGGQAVGARAAHQARLAGGQVDQVV 992
Query: 401 SLARGPRSESGRGLDPAEGAVFITP 425
AR ++ RG P A+ P
Sbjct: 993 VAARAGDADGVRGRRPRRLALTARP 1017
Score = 34.7 bits (78), Expect = 0.18
Identities = 36/104 (34%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 250 GEAVIQLL----QLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIH 305
G AV+Q Q HL A Q HR + P H H GARG
Sbjct: 888 GAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHR----HRPGARGRR 943
Query: 306 AARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 349
+ R V A GA RAA GG V GAR A AR A
Sbjct: 944 SRRRAAVALAGGAHPARAALGRRRGGGQAV---GARAAHQARLA 984
Score = 30.0 bits (66), Expect = 4.4
Identities = 48/183 (26%), Positives = 65/183 (35%), Gaps = 39/183 (21%)
Query: 263 VGAGVLELGVDGVGQR-EVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQ 321
+GA V G+ G+ + + +L E P HA +A G+ + R R
Sbjct: 292 LGAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRDR----------- 340
Query: 322 RAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLA 381
+ G +SH+ P R RAA GGRG R GRR R
Sbjct: 341 --LRRGGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRR---------RQQGRRGRRQAG 389
Query: 382 PG-----EEANEGAVG-------VGGGSAAASL---ARGPRSESGRGLDPAEGAVFITPL 426
PG + GA+G V G A L ARGP + + A P
Sbjct: 390 PGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRPAALAQEALRAAA-ARPH 448
Query: 427 GKR 429
G+R
Sbjct: 449 GRR 451
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 45.4 bits (106), Expect = 1e-04
Identities = 72/268 (26%), Positives = 91/268 (33%), Gaps = 65/268 (24%)
Query: 196 LSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVD--VVGEAV 253
+ RG GG P RG G L + VLG+ + A + V G
Sbjct: 722 IQRGRGGLGHRPLPGWRG----QGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGHVP 777
Query: 254 IQLLQLHLLVGAGVLELGV--------DGVGQREVHRVLQEPHPGHAAPQAHGRGA---- 301
++L + G G L G+ +G VL + H A A G GA
Sbjct: 778 VELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGG 837
Query: 302 ------------RGIHAARGR-GVEAAAGAGAQRAAQAVGAGGR---------------- 332
R + A R R G A A AG Q A G GGR
Sbjct: 838 PLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGA--GAGGGGRRVRHGHGHGAAVLQRA 895
Query: 333 -----SHVAP-AGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEA 386
H+AP A A A+G RAA+ GR H PG G P R G
Sbjct: 896 PCRQQRHLAPAAAAAAAQGVRAAQ-----GRAHRPGAQGA-----PSHRHRPGARGRRSR 945
Query: 387 NEGAVGVGGGSAAASLARGPRSESGRGL 414
AV + GG+ A A G R G+ +
Sbjct: 946 RRAAVALAGGAHPARAALGRRRGGGQAV 973
Score = 37.7 bits (86), Expect = 0.021
Identities = 47/145 (32%), Positives = 53/145 (36%), Gaps = 14/145 (9%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAV-GAGGRSHVAPAGARP------ 342
G HG GA + A R A A A AAQ V A GR+H A P
Sbjct: 878 GRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRP 937
Query: 343 -ARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGG-SAAA 400
ARG R+ AV G G H GRRR G A G A A GG
Sbjct: 938 GARGRRSRRRAAVALAG---GAHPARAAL--GRRRGGGQAVGARAAHQARLAGGQVDQVV 992
Query: 401 SLARGPRSESGRGLDPAEGAVFITP 425
AR ++ RG P A+ P
Sbjct: 993 VAARAGDADGVRGRRPRRLALTARP 1017
Score = 34.7 bits (78), Expect = 0.18
Identities = 36/104 (34%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 250 GEAVIQLL----QLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIH 305
G AV+Q Q HL A Q HR + P H H GARG
Sbjct: 888 GAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHR----HRPGARGRR 943
Query: 306 AARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 349
+ R V A GA RAA GG V GAR A AR A
Sbjct: 944 SRRRAAVALAGGAHPARAALGRRRGGGQAV---GARAAHQARLA 984
Score = 30.0 bits (66), Expect = 4.4
Identities = 48/183 (26%), Positives = 65/183 (35%), Gaps = 39/183 (21%)
Query: 263 VGAGVLELGVDGVGQR-EVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQ 321
+GA V G+ G+ + + +L E P HA +A G+ + R R
Sbjct: 292 LGAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRDR----------- 340
Query: 322 RAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLA 381
+ G +SH+ P R RAA GGRG R GRR R
Sbjct: 341 --LRRGGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRR---------RQQGRRGRRQAG 389
Query: 382 PG-----EEANEGAVG-------VGGGSAAASL---ARGPRSESGRGLDPAEGAVFITPL 426
PG + GA+G V G A L ARGP + + A P
Sbjct: 390 PGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRPAALAQEALRAAA-ARPH 448
Query: 427 GKR 429
G+R
Sbjct: 449 GRR 451
>gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo
sapiens]
Length = 697
Score = 45.1 bits (105), Expect = 1e-04
Identities = 57/199 (28%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 214 PATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVD 273
P G ++L +AH L L L QEA EA+ H LV V GV
Sbjct: 363 PGADDGLRVVLDQAHP-LAFWSLRLWEQEAG-----SEALRGSSAPHPLVPGAVGAEGVR 416
Query: 274 GVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRS 333
G+ ++EV P H++P H G G A G GV+ + G + + +
Sbjct: 417 GLWEQEVGSKALRGSPAHSSPALHP-GVPGSVGA-GEGVKGSQRHGDSTTSLIISYALVT 474
Query: 334 HVA-PAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVG 392
+ P A H GGR G G G R P RR + G +A A
Sbjct: 475 IMDFPIPQGLALTTHPGWHSEAGGRRDGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAA 534
Query: 393 VGGGSAAASLARGPRSESG 411
+G G+A A+G S SG
Sbjct: 535 LGRGAALRRAAQGAGSASG 553
Score = 40.8 bits (94), Expect = 0.003
Identities = 34/86 (39%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 299 RGARGIHAARGRGVEAAAGAGAQRAA---------QAVGAGGRSHVAPAGARPARGARAA 349
+G RG H RG V+A AG Q AA A GAG S + GA ARG R A
Sbjct: 509 QGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRAAQGAGSASGLL-GGAVGARGRRRA 567
Query: 350 EHPAVGGRGHGPGGHGCGGWRWPGRR 375
P V G G G WR G R
Sbjct: 568 HKPVVVGERLRGRGARVGTWRRGGGR 593
>gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo
sapiens]
Length = 697
Score = 45.1 bits (105), Expect = 1e-04
Identities = 57/199 (28%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 214 PATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVD 273
P G ++L +AH L L L QEA EA+ H LV V GV
Sbjct: 363 PGADDGLRVVLDQAHP-LAFWSLRLWEQEAG-----SEALRGSSAPHPLVPGAVGAEGVR 416
Query: 274 GVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRS 333
G+ ++EV P H++P H G G A G GV+ + G + + +
Sbjct: 417 GLWEQEVGSKALRGSPAHSSPALHP-GVPGSVGA-GEGVKGSQRHGDSTTSLIISYALVT 474
Query: 334 HVA-PAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVG 392
+ P A H GGR G G G R P RR + G +A A
Sbjct: 475 IMDFPIPQGLALTTHPGWHSEAGGRRDGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAA 534
Query: 393 VGGGSAAASLARGPRSESG 411
+G G+A A+G S SG
Sbjct: 535 LGRGAALRRAAQGAGSASG 553
Score = 37.7 bits (86), Expect = 0.021
Identities = 33/86 (38%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 299 RGARGIHAARGRGVEAAAGAGAQRAA---------QAVGAGGRSHVAPAGARPARGARAA 349
+G RG H RG V+A AG Q AA A GAG S + GA ARG R A
Sbjct: 509 QGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRAAQGAGSASGLL-GGAVGARGRRRA 567
Query: 350 EHPAVGGRGHGPGGHGCGGWRWPGRR 375
P V G G WR G R
Sbjct: 568 HKPVVVGERLRGRGARVRTWRRGGGR 593
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 44.7 bits (104), Expect = 2e-04
Identities = 37/137 (27%), Positives = 51/137 (37%), Gaps = 8/137 (5%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 349
G AP + G G G G + G+GG S+ + G RG+ +
Sbjct: 495 GECAPNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGS 554
Query: 350 EHPAVG------GRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLA 403
+ G G G G GGHG G G G + G G GGGS+ S+
Sbjct: 555 GGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSI- 613
Query: 404 RGPRSESGRGLDPAEGA 420
G R S G+ + G+
Sbjct: 614 -GGRGSSSGGVKSSGGS 629
Score = 32.7 bits (73), Expect = 0.68
Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 298 GRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGR 357
G G+ G G G + G G + G+GG S+ + G+ + G G
Sbjct: 524 GYGSGGSSYGSGGGSYGSGGGGGGGRG-SYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGS 582
Query: 358 -------GHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAA 399
G G GG G G R G G G ++ G V GGS++
Sbjct: 583 SSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSSS 631
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 44.7 bits (104), Expect = 2e-04
Identities = 51/160 (31%), Positives = 61/160 (38%), Gaps = 19/160 (11%)
Query: 286 EPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARG 345
EP P A A GA G A+G +A A A A AG + GA A+G
Sbjct: 804 EPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKG 863
Query: 346 ARAAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARG 405
AR + P PG G +PG G PG N G G G A +G
Sbjct: 864 ARGSAGP--------PGATG-----FPGAAGRVG-PPGPSGNAGPPG-PPGPAGKEGGKG 908
Query: 406 PRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIG 445
PR E+G P E + P G P+ S GA P G
Sbjct: 909 PRGETGPAGRPGE----VGPPGPPGPAGEKGSPGADGPAG 944
Score = 40.8 bits (94), Expect = 0.003
Identities = 90/344 (26%), Positives = 113/344 (32%), Gaps = 79/344 (22%)
Query: 131 EQTDGFSGTSG-TAQRGNHG-----GRTDLQDSPAIPAPEGP---------SLCLAPSTA 175
++T G G G T RG G GR + P +P P GP AP +
Sbjct: 105 QETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLS 164
Query: 176 F------------PSFLLP------PGLPPATSPRAWQLSRG----PGGRSPLPPAPSRG 213
+ P + P PG P A P+ +Q G PG P+ P G
Sbjct: 165 YGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPG 224
Query: 214 PATCMG-----AALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVL 268
P G P G Q L A L + G
Sbjct: 225 PPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFS------------- 271
Query: 269 ELGVDGVGQREVHRVLQEPHPGHAAPQAHG----RGARGIHAARGR-GVEAAAGA----G 319
G+DG + + + PG +P +G G RG+ RGR G AGA G
Sbjct: 272 --GLDG-AKGDAGPAGPKGEPG--SPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDG 326
Query: 320 AQRAAQAVGAGGRS-------HVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWP 372
A AA G G + V G +G R +E P G RG PG G G P
Sbjct: 327 ATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQ-GVRGE-PGPPGPAGAAGP 384
Query: 373 GRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDP 416
PG + GA G+ G ARGP G G P
Sbjct: 385 AGNPGADGQPGAKGANGAPGIAGAPGFPG-ARGPSGPQGPGGPP 427
Score = 38.1 bits (87), Expect = 0.016
Identities = 52/173 (30%), Positives = 59/173 (34%), Gaps = 19/173 (10%)
Query: 289 PGHAAPQAHGRGARGIHAARG-------RGVEAAAG-AGAQRAAQAVG-AGGRSHVAPAG 339
PG A + RGARG G RG + G GA A G AG R PAG
Sbjct: 460 PGPAGEEGK-RGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAG 518
Query: 340 AR--PARGARAAEHPAVGGRG-----HGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVG 392
+ P R E G +G PG G G P + R PG G G
Sbjct: 519 PKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAG 578
Query: 393 VGGGSAAASLARGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGARQPIG 445
V G A P RG+ GAV P GK + G P G
Sbjct: 579 VMGFPGPKGAAGEPGKAGERGVPGPPGAV--GPAGKDGEAGAQGPPGPAGPAG 629
Score = 37.0 bits (84), Expect = 0.036
Identities = 42/126 (33%), Positives = 48/126 (38%), Gaps = 24/126 (19%)
Query: 290 GHAAPQAHGRGARGIHAARG-RGVEAAAG-AGAQRAAQAVGAGGRSHVAPAGARPARGAR 347
G A PQ G RG +G RG G AGA A GA G+ GA+ A GA
Sbjct: 353 GEAGPQ----GPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQP-----GAKGANGA- 402
Query: 348 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGG--GSAAASLARG 405
P + G PG G G + PG PG + N G G G G A G
Sbjct: 403 ----PGIAGAPGFPGARGPSGPQGPGG------PPGPKGNSGEPGAPGSKGDTGAKGEPG 452
Query: 406 PRSESG 411
P G
Sbjct: 453 PVGVQG 458
Score = 37.0 bits (84), Expect = 0.036
Identities = 91/338 (26%), Positives = 119/338 (35%), Gaps = 70/338 (20%)
Query: 135 GFSGTSGTAQRGNHGGRTDLQDSPAIPAPEG-PSLCLAPSTA-FPSFLLPPGLPPATSPR 192
GF G G A G + SP P+G P P A P G P + P
Sbjct: 494 GFPGADGVAGPKGPAGE---RGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPD 550
Query: 193 AWQLSRGPGGRS--PLPPAP--SRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDV 248
GP G+ P PP P +RG A MG P G+ +A V
Sbjct: 551 GKTGPPGPAGQDGRPGPPGPPGARGQAGVMG----FPGPKGAAGEPG------KAGERGV 600
Query: 249 VGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAAR 308
G G G ++ Q P PG A P A RG +G +
Sbjct: 601 PGPP------------------GAVGPAGKDGEAGAQGP-PGPAGP-AGERGEQGPAGSP 640
Query: 309 G-RGVEAAAGA-------GAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHG 360
G +G+ AG G Q +GA G P+GAR RG P G
Sbjct: 641 GFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG-----PSGARGERG-----FPGERGVQGP 690
Query: 361 PGGHGCGGWRW-PGRRRWRGLA--PGEEANEGAVGVGG--GSAAASLARGPRSESG---- 411
PG G G PG +G A PG ++GA G+ G G A+ GP+ + G
Sbjct: 691 PGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGP 750
Query: 412 RGLDPAEGAVFIT----PLGKRVPSHCHPSRGARQPIG 445
+G D + G + P+G P+ +G P G
Sbjct: 751 KGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSG 788
Score = 37.0 bits (84), Expect = 0.036
Identities = 57/208 (27%), Positives = 69/208 (33%), Gaps = 51/208 (24%)
Query: 287 PHPGHAAPQAHGRGARGIHAARGR-------------------GVEAAAGAGAQRAAQAV 327
P P A + G+G RG GR G + AGA Q +
Sbjct: 895 PGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGI 954
Query: 328 GAGGRSHVAPAGARPARGARAAEHP-----------AVGGRGHGPGGHGCGGWRWPGRRR 376
AG R V G R RG P A G RG PG G G P
Sbjct: 955 -AGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGP-PGPMGPPGLAGPPGES 1012
Query: 377 WRGLAPGEEANEGAVGVGG--------------GSAAASLARGPRSESGRGLD-----PA 417
R APG E + G G G G+ A A GP +G+ D PA
Sbjct: 1013 GREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPA 1072
Query: 418 EGAVFITPLGKRVPSHCHPSRGARQPIG 445
A + P+G R P+ RG + G
Sbjct: 1073 GPAGPVGPVGARGPAGPQGPRGDKGETG 1100
Score = 30.4 bits (67), Expect = 3.4
Identities = 33/121 (27%), Positives = 38/121 (31%), Gaps = 2/121 (1%)
Query: 300 GARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGH 359
GA G RG A + G R P GAR G A P + G
Sbjct: 212 GASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGT--AGLPGMKGHRG 269
Query: 360 GPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEG 419
G G G P + +PGE G +G G P RG D A G
Sbjct: 270 FSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATG 329
Query: 420 A 420
A
Sbjct: 330 A 330
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 44.7 bits (104), Expect = 2e-04
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 316 AGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGHGCGGWRWPGRR 375
+GAG +R AVG G + APA R R A A GG G G GG GG R P +
Sbjct: 40 SGAGERRGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGGGG---GGGRGP-QA 95
Query: 376 RWRGLAPGEEANEGAVGVGGGSAAA 400
R RG PGE + G A A
Sbjct: 96 RARGGGPGEPRGQQPASRGALPARA 120
Score = 30.0 bits (66), Expect = 4.4
Identities = 25/67 (37%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 356 GRGHGPGGHGCGGWRWP----GRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESG 411
G G GG GG P RR R P E A A G GGG RGP++ +
Sbjct: 41 GAGERRGGAAVGGGEQPPPAPAPRRERRDLPAEPA--AARGGGGGGGGGGGGRGPQARA- 97
Query: 412 RGLDPAE 418
RG P E
Sbjct: 98 RGGGPGE 104
>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1128
Score = 44.3 bits (103), Expect = 2e-04
Identities = 51/152 (33%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 349
G A A GRGA+ + RG GVE GAQ+ VG R H R R RAA
Sbjct: 462 GEAGAGAAGRGAQSV---RGPGVERRVAEGAQQFGPRVGL--RQH----AERVERAQRAA 512
Query: 350 EHPAVGGRGHGPGGHGCGGWR-----WPGRRRWRGLAPGEEANEGAVGVGGGSAAASLAR 404
E GRG G GG GCG G+ RW G+ A G + S
Sbjct: 513 E-----GRG-GGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS--- 563
Query: 405 GPRSESGRGLDPAEGAVFITPLGKRVPSHCHP 436
R + GR P + + L +RVP C P
Sbjct: 564 --RHQPGRD-RPHHHHLELESLRERVP--CEP 590
Score = 41.2 bits (95), Expect = 0.002
Identities = 49/158 (31%), Positives = 58/158 (36%), Gaps = 10/158 (6%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAG--GRSHVAPAGARPARGAR 347
GH P G G+ RGR E AG + G G GR V A GA
Sbjct: 409 GHLLPLVQRDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAG 467
Query: 348 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPG----EEANEGAVGVGGGSAAASLA 403
AA A RG G G + G R GL E A A G GGG A
Sbjct: 468 AAGRGAQSVRGPGVERRVAEGAQQFGPR--VGLRQHAERVERAQRAAEGRGGGGGGGCGA 525
Query: 404 RGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 441
+ R G+G EG V G+R+ HC R ++
Sbjct: 526 QAHRRVVGQGQVRWEG-VGQAARGRRMAHHCSQGRNSQ 562
Score = 34.3 bits (77), Expect = 0.24
Identities = 36/107 (33%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 264 GAGVLELGVDGVG----QREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAG 319
GAG G V +R V Q+ P Q R R AA GRG G G
Sbjct: 465 GAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCG 524
Query: 320 AQRAAQAVGAGGRSHVAPAG-ARPARGARAAEHPAVGGRG---HGPG 362
AQ + VG G V G + ARG R A H + G H PG
Sbjct: 525 AQAHRRVVGQG---QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 568
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 44.3 bits (103), Expect = 2e-04
Identities = 65/230 (28%), Positives = 81/230 (35%), Gaps = 34/230 (14%)
Query: 201 GGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLH 260
GGR+ RG A + + LP A G+ + L +A A ++ Q
Sbjct: 264 GGRAAAGLGSQRGAA--LAGLIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQQTE 321
Query: 261 LLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGA 320
G +G G R + P P PQ+ A G GV AGA
Sbjct: 322 REPWGG------EGAGSRFKRLHDESPRPNF--PQS---------LAEGLGVSPQAGARV 364
Query: 321 QRAAQAVGAGGRSHVAPAGARPARGARAA---------EHPAVGGRGHGPGGHGCGGWRW 371
A +AV R+H+ G AR +AA +GGRG G G G W
Sbjct: 365 GEAREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGRG-VCGKCGPGPWDD 423
Query: 372 PGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGAV 421
P RRR PG A G G A A S GRG P G V
Sbjct: 424 PARRR----NPGAAARAKLAGQRAGRARARTGSQVGSR-GRGWGPGAGRV 468
Score = 29.3 bits (64), Expect = 7.6
Identities = 54/197 (27%), Positives = 73/197 (37%), Gaps = 34/197 (17%)
Query: 183 PGLPPATSPRAWQLSRGPGG-------------RSPLPPAPSRGPATCMGAALLLPEAHD 229
P P A PR Q R P G SP P P + A +G + P+A
Sbjct: 309 PACPAA--PRMQQTEREPWGGEGAGSRFKRLHDESPRPNFP-QSLAEGLGVS---PQAGA 362
Query: 230 VLGQ-QDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREV---HRVLQ 285
+G+ ++ + + AHL D GEA +L G ++ +G G R V
Sbjct: 363 RVGEAREAVTTHERAHL-DREGEARARL-------GQAAAQMRREGWGARAKLGGRGVCG 414
Query: 286 EPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARG 345
+ PG A R AAR + AG R VG+ GR AG P+ G
Sbjct: 415 KCGPGPWDDPARRRNPGA--AARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSGG 472
Query: 346 ARAAEHP-AVGGRGHGP 361
R +P GG P
Sbjct: 473 RRGVGNPERWGGEAAAP 489
>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 44.3 bits (103), Expect = 2e-04
Identities = 51/152 (33%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 349
G A A GRGA+ + RG GVE GAQ+ VG R H R R RAA
Sbjct: 135 GEAGAGAAGRGAQSV---RGPGVERRVAEGAQQFGPRVGL--RQH----AERVERAQRAA 185
Query: 350 EHPAVGGRGHGPGGHGCGGWR-----WPGRRRWRGLAPGEEANEGAVGVGGGSAAASLAR 404
E GRG G GG GCG G+ RW G+ A G + S
Sbjct: 186 E-----GRG-GGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS--- 236
Query: 405 GPRSESGRGLDPAEGAVFITPLGKRVPSHCHP 436
R + GR P + + L +RVP C P
Sbjct: 237 --RHQPGRD-RPHHHHLELESLRERVP--CEP 263
Score = 41.2 bits (95), Expect = 0.002
Identities = 49/158 (31%), Positives = 58/158 (36%), Gaps = 10/158 (6%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAG--GRSHVAPAGARPARGAR 347
GH P G G+ RGR E AG + G G GR V A GA
Sbjct: 82 GHLLPLVQRDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAG 140
Query: 348 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPG----EEANEGAVGVGGGSAAASLA 403
AA A RG G G + G R GL E A A G GGG A
Sbjct: 141 AAGRGAQSVRGPGVERRVAEGAQQFGPR--VGLRQHAERVERAQRAAEGRGGGGGGGCGA 198
Query: 404 RGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 441
+ R G+G EG V G+R+ HC R ++
Sbjct: 199 QAHRRVVGQGQVRWEG-VGQAARGRRMAHHCSQGRNSQ 235
Score = 34.3 bits (77), Expect = 0.24
Identities = 36/107 (33%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 264 GAGVLELGVDGVG----QREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAG 319
GAG G V +R V Q+ P Q R R AA GRG G G
Sbjct: 138 GAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCG 197
Query: 320 AQRAAQAVGAGGRSHVAPAG-ARPARGARAAEHPAVGGRG---HGPG 362
AQ + VG G V G + ARG R A H + G H PG
Sbjct: 198 AQAHRRVVGQG---QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 241
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 44.3 bits (103), Expect = 2e-04
Identities = 65/230 (28%), Positives = 81/230 (35%), Gaps = 34/230 (14%)
Query: 201 GGRSPLPPAPSRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLH 260
GGR+ RG A + + LP A G+ + L +A A ++ Q
Sbjct: 264 GGRAAAGLGSQRGAA--LAGLIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQQTE 321
Query: 261 LLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGA 320
G +G G R + P P PQ+ A G GV AGA
Sbjct: 322 REPWGG------EGAGSRFKRLHDESPRPNF--PQS---------LAEGLGVSPQAGARV 364
Query: 321 QRAAQAVGAGGRSHVAPAGARPARGARAA---------EHPAVGGRGHGPGGHGCGGWRW 371
A +AV R+H+ G AR +AA +GGRG G G G W
Sbjct: 365 GEAREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGRG-VCGKCGPGPWDD 423
Query: 372 PGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGAV 421
P RRR PG A G G A A S GRG P G V
Sbjct: 424 PARRR----NPGAAARAKLAGQRAGRARARTGSQVGSR-GRGWGPGAGRV 468
Score = 29.3 bits (64), Expect = 7.6
Identities = 54/197 (27%), Positives = 73/197 (37%), Gaps = 34/197 (17%)
Query: 183 PGLPPATSPRAWQLSRGPGG-------------RSPLPPAPSRGPATCMGAALLLPEAHD 229
P P A PR Q R P G SP P P + A +G + P+A
Sbjct: 309 PACPAA--PRMQQTEREPWGGEGAGSRFKRLHDESPRPNFP-QSLAEGLGVS---PQAGA 362
Query: 230 VLGQ-QDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREV---HRVLQ 285
+G+ ++ + + AHL D GEA +L G ++ +G G R V
Sbjct: 363 RVGEAREAVTTHERAHL-DREGEARARL-------GQAAAQMRREGWGARAKLGGRGVCG 414
Query: 286 EPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARG 345
+ PG A R AAR + AG R VG+ GR AG P+ G
Sbjct: 415 KCGPGPWDDPARRRNPGA--AARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSGG 472
Query: 346 ARAAEHP-AVGGRGHGP 361
R +P GG P
Sbjct: 473 RRGVGNPERWGGEAAAP 489
>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 44.3 bits (103), Expect = 2e-04
Identities = 51/152 (33%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 349
G A A GRGA+ + RG GVE GAQ+ VG R H R R RAA
Sbjct: 135 GEAGAGAAGRGAQSV---RGPGVERRVAEGAQQFGPRVGL--RQH----AERVERAQRAA 185
Query: 350 EHPAVGGRGHGPGGHGCGGWR-----WPGRRRWRGLAPGEEANEGAVGVGGGSAAASLAR 404
E GRG G GG GCG G+ RW G+ A G + S
Sbjct: 186 E-----GRG-GGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS--- 236
Query: 405 GPRSESGRGLDPAEGAVFITPLGKRVPSHCHP 436
R + GR P + + L +RVP C P
Sbjct: 237 --RHQPGRD-RPHHHHLELESLRERVP--CEP 263
Score = 41.2 bits (95), Expect = 0.002
Identities = 49/158 (31%), Positives = 58/158 (36%), Gaps = 10/158 (6%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAG--GRSHVAPAGARPARGAR 347
GH P G G+ RGR E AG + G G GR V A GA
Sbjct: 82 GHLLPLVQRDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAG 140
Query: 348 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPG----EEANEGAVGVGGGSAAASLA 403
AA A RG G G + G R GL E A A G GGG A
Sbjct: 141 AAGRGAQSVRGPGVERRVAEGAQQFGPR--VGLRQHAERVERAQRAAEGRGGGGGGGCGA 198
Query: 404 RGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 441
+ R G+G EG V G+R+ HC R ++
Sbjct: 199 QAHRRVVGQGQVRWEG-VGQAARGRRMAHHCSQGRNSQ 235
Score = 34.3 bits (77), Expect = 0.24
Identities = 36/107 (33%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 264 GAGVLELGVDGVG----QREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAG 319
GAG G V +R V Q+ P Q R R AA GRG G G
Sbjct: 138 GAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCG 197
Query: 320 AQRAAQAVGAGGRSHVAPAG-ARPARGARAAEHPAVGGRG---HGPG 362
AQ + VG G V G + ARG R A H + G H PG
Sbjct: 198 AQAHRRVVGQG---QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 241
>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 44.3 bits (103), Expect = 2e-04
Identities = 51/152 (33%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAA 349
G A A GRGA+ + RG GVE GAQ+ VG R H R R RAA
Sbjct: 135 GEAGAGAAGRGAQSV---RGPGVERRVAEGAQQFGPRVGL--RQH----AERVERAQRAA 185
Query: 350 EHPAVGGRGHGPGGHGCGGWR-----WPGRRRWRGLAPGEEANEGAVGVGGGSAAASLAR 404
E GRG G GG GCG G+ RW G+ A G + S
Sbjct: 186 E-----GRG-GGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS--- 236
Query: 405 GPRSESGRGLDPAEGAVFITPLGKRVPSHCHP 436
R + GR P + + L +RVP C P
Sbjct: 237 --RHQPGRD-RPHHHHLELESLRERVP--CEP 263
Score = 41.2 bits (95), Expect = 0.002
Identities = 49/158 (31%), Positives = 58/158 (36%), Gaps = 10/158 (6%)
Query: 290 GHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAG--GRSHVAPAGARPARGAR 347
GH P G G+ RGR E AG + G G GR V A GA
Sbjct: 82 GHLLPLVQRDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAG 140
Query: 348 AAEHPAVGGRGHGPGGHGCGGWRWPGRRRWRGLAPG----EEANEGAVGVGGGSAAASLA 403
AA A RG G G + G R GL E A A G GGG A
Sbjct: 141 AAGRGAQSVRGPGVERRVAEGAQQFGPR--VGLRQHAERVERAQRAAEGRGGGGGGGCGA 198
Query: 404 RGPRSESGRGLDPAEGAVFITPLGKRVPSHCHPSRGAR 441
+ R G+G EG V G+R+ HC R ++
Sbjct: 199 QAHRRVVGQGQVRWEG-VGQAARGRRMAHHCSQGRNSQ 235
Score = 34.3 bits (77), Expect = 0.24
Identities = 36/107 (33%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 264 GAGVLELGVDGVG----QREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAG 319
GAG G V +R V Q+ P Q R R AA GRG G G
Sbjct: 138 GAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCG 197
Query: 320 AQRAAQAVGAGGRSHVAPAG-ARPARGARAAEHPAVGGRG---HGPG 362
AQ + VG G V G + ARG R A H + G H PG
Sbjct: 198 AQAHRRVVGQG---QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 241
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 43.9 bits (102), Expect = 3e-04
Identities = 54/144 (37%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 274 GVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGV-EAAAGAGAQRAAQAVGAGGR 332
GVG +V V P PG Q GRGARG + G EAA R +V R
Sbjct: 3 GVGGGDVEDVT--PRPGGC--QISGRGARGCNGIPGAAAWEAALPRRRPRRHPSVNPRSR 58
Query: 333 SHVAPAGARPARGARAAEHPA---VGGRGHG---PGGHGCGGWRWPGRRRWRGLAPGEEA 386
+ AG+ RG R E P+ +G RG G PGG GG R RG AP
Sbjct: 59 A----AGSPRTRGRRTEERPSGSRLGDRGRGRALPGGR-LGG-------RGRGRAP---E 103
Query: 387 NEGAVGVGGGSA---AASLARGPR 407
G G G G+A AA ARG R
Sbjct: 104 RVGGRGRGRGTAAPRAAPAARGSR 127
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 43.9 bits (102), Expect = 3e-04
Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 113 LDMLFLNLSLQLLDFLQKEQTD-GFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLA 171
LD+ +L L+ L+ E D GF G G ++G+ G + P +P GP+
Sbjct: 1014 LDLAYLR---HFLNNLKGENGDKGFKGEKG--EKGDINGSFLMSGPPGLPGNPGPAGQKG 1068
Query: 172 PSTAFPSFLLPPGLPPATSPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLLPEAHDVL 231
+ P PPG P P + PG P PP P GP +GAA+ LP
Sbjct: 1069 ETVVGPQG--PPGAPGLPGPPGFGRPGDPG--PPGPPGPP-GPPAILGAAVALPGPPGPP 1123
Query: 232 GQ------QDLIL-------LLQEAHLV 246
GQ ++L+ +LQ+AHLV
Sbjct: 1124 GQPGLPGSRNLVTAFSNMDDMLQKAHLV 1151
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 43.1 bits (100), Expect = 5e-04
Identities = 90/318 (28%), Positives = 114/318 (35%), Gaps = 48/318 (15%)
Query: 135 GFSGTSGTAQRGNHGGRTDLQDSPAIPAP-----------EGPSLCLAPSTAFPSFLL-- 181
G G G R G T P P P +G + L P P L+
Sbjct: 42 GERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPG---PMGLMGP 98
Query: 182 --PPGLPPATSPRAWQLSRG-PGGRSPLPPAPSRGPATCMGAALL--LPEAHDVLGQQDL 236
PPG A P+ +Q G PG PA +RGPA G A P G++ +
Sbjct: 99 RGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGV 158
Query: 237 ILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELGVDGV-GQREVHRVLQEPHPGHAAPQ 295
+ G + ++ H G+DG+ GQ V EP AP
Sbjct: 159 VGPQGARGFPGTPGLPGFKGIRGHN---------GLDGLKGQPGAPGVKGEP----GAPG 205
Query: 296 AHGR----GARGIHAARGRGVEAAAGAGAQRAAQAVG----AGGRSHVAPAGARPARGAR 347
+G GARG+ RGR V A AGA+ + +VG AG P G A G +
Sbjct: 206 ENGTPGQTGARGLPGERGR-VGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPK 264
Query: 348 AAEHPAVGGRGH-GPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGP 406
E AVG G GP G G PG G PG G G G + +A P
Sbjct: 265 G-EIGAVGNAGPAGPAGPR-GEVGLPGLSGPVG-PPGNPGANGLTGAKGAAGLPGVAGAP 321
Query: 407 RSESGRGLDPAEGAVFIT 424
RG+ GA T
Sbjct: 322 GLPGPRGIPGPVGAAGAT 339
Score = 39.7 bits (91), Expect = 0.006
Identities = 44/128 (34%), Positives = 49/128 (38%), Gaps = 22/128 (17%)
Query: 298 GRGARGIHAARGR-------GVEAAAGA-GAQRAAQAVG----AGGRSHVAPAGARPARG 345
G+G +G RG G A GA GA A A G AG PAG R + G
Sbjct: 653 GKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPG 712
Query: 346 ARAAEHPAVGGRGHGPGGHG--CGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLA 403
R PA GP G G PG + RG A G + G VG G AA A
Sbjct: 713 ERGEVGPA------GPNGFAGPAGAAGQPGAKGERG-AKGPKGENGVVGPTGPVGAAGPA 765
Query: 404 RGPRSESG 411
GP G
Sbjct: 766 -GPNGPPG 772
Score = 37.7 bits (86), Expect = 0.021
Identities = 79/321 (24%), Positives = 107/321 (33%), Gaps = 56/321 (17%)
Query: 133 TDGFSGTSGT-AQRGNHG--GRTDLQDSPAIPAPEGPSLCLAPSTAFPSFLLPPGLPPAT 189
T G +G G +RG G G + S P GP+ + + PPG P A
Sbjct: 209 TPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAG-------PPGFPGAP 261
Query: 190 SPRAWQLSRGPGGRSPLPPAPSRGPATCMGAALLL-----PEAHDVLGQQDLILLLQEAH 244
P+ + G G P PA RG G + + P A+ + G + A
Sbjct: 262 GPKGEIGAVGNAG--PAGPAGPRGEVGLPGLSGPVGPPGNPGANGLTGAKGA------AG 313
Query: 245 LVDVVGEAVIQLLQLHLLVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGARGI 304
L V G L G + V G ++ EP P + ++ +G G
Sbjct: 314 LPGVAGAPG--------LPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPG- 364
Query: 305 HAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGHGPGGH 364
+A +G +G +R AG P G R + G+R PG
Sbjct: 365 -SAGPQGPPGPSGEEGKRGPNGE-AGSAGPPGPPGLRGSPGSRGL-----------PGAD 411
Query: 365 GCGGWRWPGRRRWRGLAPGEEANEGAVGVGGGSAAASLARGPRSESGRGLDPAEGAVFIT 424
G G P PG G GV G + A P RGL + G I
Sbjct: 412 GRAGVMGP---------PGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGN--IG 460
Query: 425 PLGKRVPSHCHPSRGARQPIG 445
P GK P G PIG
Sbjct: 461 PAGKEGPVGLPGIDGRPGPIG 481
Score = 34.7 bits (78), Expect = 0.18
Identities = 47/173 (27%), Positives = 58/173 (33%), Gaps = 29/173 (16%)
Query: 299 RGARGIHAARG-RGVEAAAGAGAQRAAQAVGAGGRSHVAPAG-----ARPARGARAAEHP 352
RG G A G +G + AG + Q AG R P G P + R E
Sbjct: 99 RGPPGAAGAPGPQGFQGPAGEPGE-PGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERG 157
Query: 353 AVGGRGHG--PGGHGCGGWRWPGRRRWRGL-----------------APGEEANEGAVGV 393
VG +G PG G G++ G R GL APGE G G
Sbjct: 158 VVGPQGARGFPGTPGLPGFK--GIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGA 215
Query: 394 GGGSAAASLARGPRSESGRGLDPAEGAVF-ITPLGKRVPSHCHPSRGARQPIG 445
G P RG D + G V P+G P + G + IG
Sbjct: 216 RGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIG 268
Score = 34.7 bits (78), Expect = 0.18
Identities = 79/306 (25%), Positives = 90/306 (29%), Gaps = 64/306 (20%)
Query: 135 GFSGTSGTAQRGNHGGRTDLQDSPAIPAPEGPSLCLAPSTAFPSFLLPPGLPPATSPRAW 194
G G SG A G L +P P GP PPG A P
Sbjct: 556 GLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPR----------GERGPPGESGAAGPTGP 605
Query: 195 QLSRGPGGRSPLPPAP--SRGPATCMGAALLLPEAHDVLGQQDLILLLQEAHLVDVVGEA 252
SRGP G PP P ++G +GA G L E + G
Sbjct: 606 IGSRGPSG----PPGPDGNKGEPGVVGAV-------GTAGPSGPSGLPGERGAAGIPG-- 652
Query: 253 VIQLLQLHLLVGAGVL-ELGVDG-VGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGR 310
G G E G+ G +G P A A G RG A G
Sbjct: 653 -----------GKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGP 701
Query: 311 GVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPAVGGRGH----GP----- 361
A + AG PAGA GA+ E A G +G GP
Sbjct: 702 AGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAK-GERGAKGPKGENGVVGPTGPVG 760
Query: 362 --GGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGG--------------GSAAASLARG 405
G G G P R G PG GA G G G A RG
Sbjct: 761 AAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRG 820
Query: 406 PRSESG 411
PR + G
Sbjct: 821 PRGDQG 826
Score = 33.1 bits (74), Expect = 0.52
Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 9/100 (9%)
Query: 299 RGARGIHAARGR-GVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPA-VGG 356
+G RG+ +G G++ G Q G V PAG R G PA G
Sbjct: 1014 KGPRGLPGLKGHNGLQGLPGIAGHHGDQ----GAPGSVGPAGPR---GPAGPSGPAGKDG 1066
Query: 357 RGHGPGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGGG 396
R PG G G R P + PG G GV GG
Sbjct: 1067 RTGHPGTVGPAGIRGPQGHQGPAGPPGPPGPPGPPGVSGG 1106
Score = 32.7 bits (73), Expect = 0.68
Identities = 45/153 (29%), Positives = 52/153 (33%), Gaps = 31/153 (20%)
Query: 299 RGARGIHAARGR-GVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPARGARAAEHPA---- 353
+G G+ ARG G + GA Q V GG+ P G +G PA
Sbjct: 510 KGHAGLAGARGAPGPDGNNGAQGPPGPQGV-QGGKGEQGPPGPPGFQGLPGPSGPAGEVG 568
Query: 354 -VGGRG-HG----------------PGGHGCGGWRWPGRRRWRGLAPGEEANEGAVGVGG 395
G RG HG PG G G P R PG + N+G GV G
Sbjct: 569 KPGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVG 628
Query: 396 GSAAASLARGPRSESGRGLDPAEGAVFITPLGK 428
A GP SG P E P GK
Sbjct: 629 AVGTA----GPSGPSGL---PGERGAAGIPGGK 654
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,069,005
Number of Sequences: 37866
Number of extensions: 1306401
Number of successful extensions: 11693
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 833
Number of HSP's that attempted gapping in prelim test: 8578
Number of HSP's gapped (non-prelim): 3245
length of query: 446
length of database: 18,247,518
effective HSP length: 105
effective length of query: 341
effective length of database: 14,271,588
effective search space: 4866611508
effective search space used: 4866611508
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.