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Search of human proteins with 239743289
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743289 PREDICTED: hypothetical protein XP_002342818 [Homo
sapiens]
(104 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo ... 212 4e-56
gi|239743289 PREDICTED: hypothetical protein XP_002342818 [Homo ... 212 4e-56
gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a... 37 0.004
gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b... 37 0.004
gi|239756877 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo ... 37 0.004
gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo ... 37 0.004
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 35 0.010
gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Hom... 35 0.017
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.017
gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo sapi... 34 0.028
gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo sapi... 34 0.028
gi|113425870 PREDICTED: hypothetical protein LOC283876 [Homo sap... 34 0.028
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 34 0.028
gi|222831660 family with sequence similarity 171, member A2 [Hom... 33 0.037
gi|78499633 phospholipase C, eta 2 [Homo sapiens] 33 0.037
gi|169171345 PREDICTED: hypothetical protein [Homo sapiens] 33 0.048
gi|169172205 PREDICTED: hypothetical protein [Homo sapiens] 33 0.048
gi|169170949 PREDICTED: hypothetical protein [Homo sapiens] 33 0.048
gi|5174711 T-box 1 isoform B [Homo sapiens] 33 0.048
gi|18104952 T-box 1 isoform C [Homo sapiens] 33 0.048
gi|18104950 T-box 1 isoform A [Homo sapiens] 33 0.048
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 33 0.048
gi|122937211 KIAA0368 protein [Homo sapiens] 33 0.048
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 33 0.063
gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo sap... 32 0.082
gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens] 32 0.082
gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo sap... 32 0.082
gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens] 32 0.082
gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo sap... 32 0.082
>gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo
sapiens]
Length = 262
Score = 212 bits (540), Expect = 4e-56
Identities = 104/104 (100%), Positives = 104/104 (100%)
Query: 1 MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA 60
MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA
Sbjct: 1 MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA 60
Query: 61 REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAE 104
REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAE
Sbjct: 61 REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAE 104
>gi|239743289 PREDICTED: hypothetical protein XP_002342818 [Homo
sapiens]
Length = 104
Score = 212 bits (540), Expect = 4e-56
Identities = 104/104 (100%), Positives = 104/104 (100%)
Query: 1 MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA 60
MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA
Sbjct: 1 MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA 60
Query: 61 REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAE 104
REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAE
Sbjct: 61 REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAE 104
>gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a
[Homo sapiens]
Length = 1130
Score = 36.6 bits (83), Expect = 0.004
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 8 MPRKAETGPPGVF----RRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREG 63
+PRK P G R +P+ + ++ + +APTPP RS R G+
Sbjct: 572 LPRKERGPPEGGLNEDERLLPKDKKTNLFSALIKKKKKTAPTPPKRSSSFREMDGQPERR 631
Query: 64 VCSRHCGGLMAAGQAARTPVPDADRRQS 91
G ++ G A TP+ AD +S
Sbjct: 632 GAGEEEGRDISNGALAFTPLDTADPAKS 659
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 5 AKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEARE 62
A G+P K E G G P + P T TS + S P + P + R RR + E
Sbjct: 827 ASGLPHKEEAG-KGSALGTPAAAEPVTPTSKAGSGAPGGTSKGPAEESRVRRHKHSSE 883
>gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b
[Homo sapiens]
Length = 1149
Score = 36.6 bits (83), Expect = 0.004
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 8 MPRKAETGPPGVF----RRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREG 63
+PRK P G R +P+ + ++ + +APTPP RS R G+
Sbjct: 591 LPRKERGPPEGGLNEDERLLPKDKKTNLFSALIKKKKKTAPTPPKRSSSFREMDGQPERR 650
Query: 64 VCSRHCGGLMAAGQAARTPVPDADRRQS 91
G ++ G A TP+ AD +S
Sbjct: 651 GAGEEEGRDISNGALAFTPLDTADPAKS 678
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 5 AKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEARE 62
A G+P K E G G P + P T TS + S P + P + R RR + E
Sbjct: 846 ASGLPHKEEAG-KGSALGTPAAAEPVTPTSKAGSGAPGGTSKGPAEESRVRRHKHSSE 902
>gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 6 KGMPRKAETGPPGVFRRMP---RSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRS 57
+G PR A++ PG RR R RPPRT + S + R RS+ RRR+
Sbjct: 32 RGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRT 86
>gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo
sapiens]
Length = 140
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 6 KGMPRKAETGPPGVFRRMP---RSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRS 57
+G PR A++ PG RR R RPPRT + S + R RS+ RRR+
Sbjct: 32 RGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRT 86
>gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo
sapiens]
Length = 140
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 6 KGMPRKAETGPPGVFRRMP---RSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRS 57
+G PR A++ PG RR R RPPRT + S + R RS+ RRR+
Sbjct: 32 RGTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRT 86
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 35.4 bits (80), Expect = 0.010
Identities = 29/67 (43%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 4 SAKGMPRKA--ETGPPGVFRRMPRSRPPRTVTSSSASSRP---SAPTPPPR----SQRRR 54
SA PRK ET P G RR P P R S S + P PTPPPR S R
Sbjct: 528 SASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPR 587
Query: 55 RRSGEAR 61
RRS R
Sbjct: 588 RRSPSPR 594
Score = 31.2 bits (69), Expect = 0.18
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 24 PRSRP-PRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAAGQAARTP 82
PR RP PR S + P PPPR +R R R S ++ +R+P
Sbjct: 311 PRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSP 370
Query: 83 VPDADRRQSAVTDATQR 99
+R S+ T+R
Sbjct: 371 PKKPPKRTSSPPRKTRR 387
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 9 PRKAETGPPGVFRRM-PRSRPPRTVTSSSASSRPSAP-TPPPRSQ 51
P K + PP RR+ P + PPR RPS P TPPP+++
Sbjct: 374 PPKRTSSPPRKTRRLSPSASPPR------RRHRPSPPATPPPKTR 412
Score = 28.5 bits (62), Expect = 1.2
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 9 PRKAETGP----PGVFRRMPRSRPP--RTVTSSSASSRPSAPTPPPR---------SQRR 53
PR+ P P + RR S PP RT + R ++P+PPP+ QR
Sbjct: 586 PRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 645
Query: 54 RRRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQS 91
+ + S+H G + P ++R S
Sbjct: 646 SPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHS 683
Score = 27.3 bits (59), Expect = 2.6
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 22/111 (19%)
Query: 2 GGSAKGMPRKAETGPPGVFRR-MPRSRPPRTVTS--------SSASSRPSAPTPPPRSQR 52
G S R+A + P PR R P+T +S SS+ R +P+P R R
Sbjct: 663 GSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIR 722
Query: 53 RRRRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAA 103
R R+ E ++ + A +P P + RR S+ + P A
Sbjct: 723 RVSRTPEPKK-------------IKKAASPSPQSVRRVSSSRSVSGSPEPA 760
Score = 26.2 bits (56), Expect = 5.9
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 9 PRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPS----APTPPPR 49
PR+ T P RR P P R S S P +P+PPP+
Sbjct: 567 PRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPK 611
Score = 25.8 bits (55), Expect = 7.7
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 22 RMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRH 68
R P +PP+ +S +R +P+ P +RR R S A +RH
Sbjct: 368 RSPPKKPPKRTSSPPRKTRRLSPSASP-PRRRHRPSPPATPPPKTRH 413
>gi|205361109 multiple C2 domains, transmembrane 1 isoform L [Homo
sapiens]
Length = 999
Score = 34.7 bits (78), Expect = 0.017
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 16 PPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHC------ 69
PPG R P S P +SS++SS S+P PPPR R R G R+G + C
Sbjct: 147 PPG--GRSPDSAPS---SSSASSSLSSSPQPPPRGD-RARDEGARRQGPGAHLCHQKSSS 200
Query: 70 -GGLMAAGQAARTPVPDADRRQS 91
G Q P P A+ +S
Sbjct: 201 LPGTACLEQLLEPPPPPAEPARS 223
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 34.7 bits (78), Expect = 0.017
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 9 PRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREG 63
PR++ +G + PR+ P R + S +S P AP PR+ RR RSG + +G
Sbjct: 1593 PRRSRSGSSPEVKDKPRAAP-RAQSGSDSSPEPKAPA--PRALPRRSRSGSSSKG 1644
Score = 28.5 bits (62), Expect = 1.2
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 27 RPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA-----REGVCSRHCGGLMAAGQAART 81
R P SSSASS P PR+ RR RSG + G SRH ++
Sbjct: 1412 RTPSRERSSSASS-PEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHS---LSGSSPGMK 1467
Query: 82 PVPDADRRQSAVTDATQRPAA 102
+P R + D++ P A
Sbjct: 1468 DIPRTPSRGRSECDSSPEPKA 1488
Score = 28.5 bits (62), Expect = 1.2
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
Query: 10 RKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHC 69
R P G+ R RSR +T T+ S+ + R QR R RS R R
Sbjct: 1761 RSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTR-----RRR 1815
Query: 70 GGLMAAGQAARTPVPDADRRQSAVTDATQR 99
GG +G +R+P R++S+ T + +R
Sbjct: 1816 GG---SGYHSRSPA----RQESSRTSSRRR 1838
Score = 28.5 bits (62), Expect = 1.2
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 10 RKAETGPPGVFRRMPRSRPPRTVTSSSASSRP------SAPTPPPRSQRRRRRSGEAREG 63
R++ + P V RR RSR P T S + + P + TPP +R R R+
Sbjct: 1921 RRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRR 1980
Query: 64 VCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQR 99
+ +RT R +S + T+R
Sbjct: 1981 RSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR 2016
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 2 GGSAKGMPRKAETGPPGVFR-RMPRS-----RPPRTVTSSSASSRPSAPTPPPRSQRRRR 55
G A P + PPG R R PR R R+++ S R +P P PR Q+
Sbjct: 2655 GPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSS 2714
Query: 56 RSGEAREG 63
+R G
Sbjct: 2715 SERGSRRG 2722
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 8 MPRK-AETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEARE 62
+PRK + + P RR RSR PRT + +R P + RRR SG + +
Sbjct: 2037 LPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTR------SPPAIRRRSASGSSSD 2086
Score = 26.6 bits (57), Expect = 4.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 22 RMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSR 67
+ P PP+ + SS +PTP + +++++ G E R
Sbjct: 161 KQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPR 206
Score = 26.6 bits (57), Expect = 4.5
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 14 TGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLM 73
T PP + R RSR P + S S + AP+P R + +S L
Sbjct: 2397 TSPPLLDRA--RSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQS-------------LLP 2441
Query: 74 AAGQAARTPVPDADRRQSAVTDATQRPAA 102
A R+PVP A QS A P A
Sbjct: 2442 PAQDQPRSPVPSAFSDQSRCLIAQTTPVA 2470
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Query: 24 PRSRPPRTVTSSSA----------SSRPSAPTPPPRSQRRRRRSGEARE 62
PR+ P R+ + SS+ SS S+P PP+S+ RR S + E
Sbjct: 1629 PRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPE 1677
Score = 25.8 bits (55), Expect = 7.7
Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 16/102 (15%)
Query: 2 GGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPS------APTPPPRSQRRR- 54
G S P + + RR RSR P + S S P+ + TP R + R
Sbjct: 613 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSR 672
Query: 55 ---RRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAV 93
RRSG +R +R +RTP R +S V
Sbjct: 673 TPARRSGRSRSRTPARR------GRSRSRTPRRGRSRSRSLV 708
>gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo
sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.028
Identities = 33/97 (34%), Positives = 38/97 (39%), Gaps = 16/97 (16%)
Query: 2 GGSAK--GMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQR-----RR 54
G S K G P A+ PPG P R T +S S P P P QR RR
Sbjct: 107 GASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRR 166
Query: 55 R--RSGEAREGVCSRHCGGLMAAGQAARTPVPDADRR 89
R R+ E +E V + L A PDA RR
Sbjct: 167 RVERAAEDKEEVAVENKKELSAV-------CPDAGRR 196
>gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo
sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.028
Identities = 33/97 (34%), Positives = 38/97 (39%), Gaps = 16/97 (16%)
Query: 2 GGSAK--GMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQR-----RR 54
G S K G P A+ PPG P R T +S S P P P QR RR
Sbjct: 107 GASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRR 166
Query: 55 R--RSGEAREGVCSRHCGGLMAAGQAARTPVPDADRR 89
R R+ E +E V + L A PDA RR
Sbjct: 167 RVERAAEDKEEVAVENKKELSAV-------CPDAGRR 196
>gi|113425870 PREDICTED: hypothetical protein LOC283876 [Homo
sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.028
Identities = 33/97 (34%), Positives = 38/97 (39%), Gaps = 16/97 (16%)
Query: 2 GGSAK--GMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQR-----RR 54
G S K G P A+ PPG P R T +S S P P P QR RR
Sbjct: 107 GASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRR 166
Query: 55 R--RSGEAREGVCSRHCGGLMAAGQAARTPVPDADRR 89
R R+ E +E V + L A PDA RR
Sbjct: 167 RVERAAEDKEEVAVENKKELSAV-------CPDAGRR 196
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 33.9 bits (76), Expect = 0.028
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 30 RTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRR 89
R ++ RP P +Q R RR G ARE G A G A P+P + R
Sbjct: 35 RAGLATGKGQRPPGPGRVRAAQARARRGGGARERPAEGARGPRAARGGARAAPMPSSAPR 94
Query: 90 QSAVTDATQRPAAAE 104
A +RP++AE
Sbjct: 95 -GPTEPALRRPSSAE 108
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 33.5 bits (75), Expect = 0.037
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 2 GGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPR---SQRRRRRSG 58
GG A+ ++G R R RP R + + P P PPR S+ S
Sbjct: 676 GGGARSTDASLDSGVDVHEARPARRRPAREERERAPPAAPPPPPAPPRLALSEDTEPSSS 735
Query: 59 EAREGVCS 66
E+R G+CS
Sbjct: 736 ESRTGLCS 743
>gi|78499633 phospholipase C, eta 2 [Homo sapiens]
Length = 1416
Score = 33.5 bits (75), Expect = 0.037
Identities = 26/83 (31%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 12 AETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGG 71
AE PG P PP V +SS+ RP PT P + E R C G
Sbjct: 1007 AEEPAPG-----PGPPPPAAVPTSSSQGRPPYPTGPGANVASPLEDTEEPRDSRPRPCNG 1061
Query: 72 LMAAGQAARTPVPDADRRQSAVT 94
A G R P D R T
Sbjct: 1062 EGAGGAYERAPGSQTDGRSQPRT 1084
>gi|169171345 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 33.1 bits (74), Expect = 0.048
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 4 SAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREG 63
+ +G+ + + PG PR R P A S P+A +PPP ++R R + AR
Sbjct: 102 AGRGLAGRLQQVRPGAAG--PRGRLPWVTGPRPAGSLPAAQSPPP-AERPGRDAAGAR-- 156
Query: 64 VCSRHCGGLMAAGQAARTPVPDADR 88
VC GG +AA P P R
Sbjct: 157 VCGTQRGG---CARAAEAPQPTGGR 178
>gi|169172205 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 33.1 bits (74), Expect = 0.048
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 4 SAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREG 63
+ +G+ + + PG PR R P A S P+A +PPP ++R R + AR
Sbjct: 102 AGRGLAGRLQQVRPGAAG--PRGRLPWVTGPRPAGSLPAAQSPPP-AERPGRDAAGAR-- 156
Query: 64 VCSRHCGGLMAAGQAARTPVPDADR 88
VC GG +AA P P R
Sbjct: 157 VCGTQRGG---CARAAEAPQPTGGR 178
>gi|169170949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 33.1 bits (74), Expect = 0.048
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 4 SAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREG 63
+ +G+ + + PG PR R P A S P+A +PPP ++R R + AR
Sbjct: 102 AGRGLAGRLQQVRPGAAG--PRGRLPWVTGPRPAGSLPAAQSPPP-AERPGRDAAGAR-- 156
Query: 64 VCSRHCGGLMAAGQAARTPVPDADR 88
VC GG +AA P P R
Sbjct: 157 VCGTQRGG---CARAAEAPQPTGGR 178
>gi|5174711 T-box 1 isoform B [Homo sapiens]
Length = 372
Score = 33.1 bits (74), Expect = 0.048
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 3 GSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEARE 62
G+A G P A G R P PPR ++A+ P PPP + +G A
Sbjct: 22 GAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAPAAGAATS 81
Query: 63 GVCSRHCGGLMAAGQAARTPV 83
G A AA+ PV
Sbjct: 82 AAAEPEGPGASCAA-AAKAPV 101
>gi|18104952 T-box 1 isoform C [Homo sapiens]
Length = 495
Score = 33.1 bits (74), Expect = 0.048
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 3 GSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEARE 62
G+A G P A G R P PPR ++A+ P PPP + +G A
Sbjct: 22 GAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAPAAGAATS 81
Query: 63 GVCSRHCGGLMAAGQAARTPV 83
G A AA+ PV
Sbjct: 82 AAAEPEGPGASCAA-AAKAPV 101
>gi|18104950 T-box 1 isoform A [Homo sapiens]
Length = 398
Score = 33.1 bits (74), Expect = 0.048
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 3 GSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEARE 62
G+A G P A G R P PPR ++A+ P PPP + +G A
Sbjct: 22 GAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAPAAGAATS 81
Query: 63 GVCSRHCGGLMAAGQAARTPV 83
G A AA+ PV
Sbjct: 82 AAAEPEGPGASCAA-AAKAPV 101
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 33.1 bits (74), Expect = 0.048
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 1 MGGSAK-----GMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRR 55
MGGS G P G P V +P P T+S + P+ P P +SQ+
Sbjct: 486 MGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTTSV--TMPNVPAPLAQSQQLSS 543
Query: 56 RSGEAREGVCSRHCGGLMAAG-QAARTPVPDADRRQ 90
+ +R +H G +A G +A T +P +D Q
Sbjct: 544 HTPVSRSSSIIQHVGLPLAPGTHSAPTSLPQSDLSQ 579
>gi|122937211 KIAA0368 protein [Homo sapiens]
Length = 2017
Score = 33.1 bits (74), Expect = 0.048
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 6 KGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRR---RSGEARE 62
+G P P G+ R PR RT S++ +SR A P + R R R A +
Sbjct: 93 RGSPGPLGPAPHGLRRAAPRGPARRTPRSTALTSRRRAQRPRHGDRLRLRSEARPRAAGD 152
Query: 63 GVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQR 99
C+R GG + G+ R P ++ R A AT +
Sbjct: 153 WPCAR--GGAVRPGRPHRPPRVESARGAHAGRAATDQ 187
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 32.7 bits (73), Expect = 0.063
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 3 GSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRR-RSGEAR 61
G A+ +++ GP GV R PR P+ S S P TPP + ++ R
Sbjct: 780 GGARSSSQRSPVGPAGV--RSPRPGSPQMQASPSPGIAPKPKTPPTAPEPAAAVQAPLPR 837
Query: 62 EGVCSRHCGGLMAAGQAARTPVPDADRR-QSAVTDATQRPAAA 103
E + G A Q P DR QS A ++P AA
Sbjct: 838 EPLA---LAGRTAPAQPRAASAPPTDRSPQSPSQGARRQPGAA 877
Score = 26.9 bits (58), Expect = 3.4
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 9 PRKAETGP-PGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSR 67
P+ T P P + P R P + +A ++P A + PP + + S AR +
Sbjct: 818 PKTPPTAPEPAAAVQAPLPREPLALAGRTAPAQPRAASAPPTDRSPQSPSQGARRQPGAA 877
Query: 68 HCGGLMAAGQAARTPVPDADRR 89
G ++ ++ R +A R+
Sbjct: 878 PLGKVLVDPESGRYYFVEAPRQ 899
>gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 32.3 bits (72), Expect = 0.082
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 18 GVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAAGQ 77
G+ RRMPR P T A R P PP Q ++ S G+C+ GG
Sbjct: 136 GLPRRMPRP-PIAFATLERAKERKRQPPSPPPKQTDKKLSFSYDHGLCAPAAGGGQGGAH 194
Query: 78 AARTP 82
+ P
Sbjct: 195 TRKLP 199
>gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]
Length = 193
Score = 32.3 bits (72), Expect = 0.082
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 5 AKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGV 64
A MP+ G P + + P R S+ S++PS+P P P+ ++ + GE
Sbjct: 33 ATTMPKGKAEGDPKGDKAKVKDEPQRR--SARLSAKPSSPKPEPKPKKAPAKKGEK---- 86
Query: 65 CSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAA 103
+ G AG+ P + D A TD Q+ A
Sbjct: 87 VLKEKKGKADAGKEGNNPAENGD----AKTDQEQKAEGA 121
>gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 32.3 bits (72), Expect = 0.082
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 18 GVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAAGQ 77
G+ RRMPR P T A R P PP Q ++ S G+C+ GG
Sbjct: 136 GLPRRMPRP-PIAFATLERAKERKRQPPSPPPKQTDKKLSFSYDHGLCAPAAGGGQGGAH 194
Query: 78 AARTP 82
+ P
Sbjct: 195 TRKLP 199
>gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]
Length = 176
Score = 32.3 bits (72), Expect = 0.082
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 5 AKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGV 64
A MP+ G P + + P R S+ S++PS+P P P+ ++ + GE
Sbjct: 16 ATTMPKGKAEGDPKGDKAKVKDEPQRR--SARLSAKPSSPKPEPKPKKAPAKKGEK---- 69
Query: 65 CSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAA 103
+ G AG+ P + D A TD Q+ A
Sbjct: 70 VLKEKKGKADAGKEGNNPAENGD----AKTDQEQKAEGA 104
>gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo
sapiens]
Length = 297
Score = 32.3 bits (72), Expect = 0.082
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 18 GVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAAGQ 77
G+ RRMPR P T A R P PP Q ++ S G+C+ GG
Sbjct: 136 GLPRRMPRP-PIAFATLERAKERKRQPPSPPPKQTDKKLSFSYDHGLCAPAAGGGQGGAH 194
Query: 78 AARTP 82
+ P
Sbjct: 195 TRKLP 199
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.126 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,653,884
Number of Sequences: 37866
Number of extensions: 331311
Number of successful extensions: 4355
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 381
Number of HSP's that attempted gapping in prelim test: 3478
Number of HSP's gapped (non-prelim): 1179
length of query: 104
length of database: 18,247,518
effective HSP length: 75
effective length of query: 29
effective length of database: 15,407,568
effective search space: 446819472
effective search space used: 446819472
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.