Guide to the Human Genome
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Name: NACA2 Sequence: fasta or formatted (215aa) NCBI GI: 40548328
Description:

nascent-polypeptide-associated complex alpha polypeptide-like

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         24           3
 C cysteine            0.0          0           0
 D aspartate           4.2          9           1
 E glutamate          11.6         25           4
 F phenylalanine       1.4          3           1
 G glycine             5.6         12           1
 H histidine           0.0          0           0
 I isoleucine          4.7         10           1
 K lysine              7.4         16           1
 L leucine             5.6         12           2
 M methionine          1.9          4           1
 N asparagine          3.7          8           2
 P proline             3.3          7           1
 Q glutamine           7.9         17           2
 R arginine            3.3          7           1
 S serine              7.9         17           1
 T threonine           8.4         18           3
 V valine             10.2         22           1
 W tryptophan          0.9          2           1
 Y tyrosine            0.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nascent-polypeptide-associated complex alpha polypep... 
NACA                  0.888   nascent polypeptide-associated complex alpha subuni...
NACA                  0.888   nascent polypeptide-associated complex alpha subunit ...
NACA                  0.888   nascent polypeptide-associated complex alpha subuni...
NACA                  0.792   nascent polypeptide-associated complex alpha subuni...
NACAD                 0.513   NAC alpha domain containing 
NACAD                 0.513   PREDICTED: NAC alpha domain containing 
NACAD                 0.513   PREDICTED: NAC alpha domain containing 
NACAD                 0.513   PREDICTED: NAC alpha domain containing 
NACAD                 0.513   PREDICTED: NAC alpha domain containing 
C15orf63              0.036   chromosome 15 open reading frame 63 
FTSJ3                 0.026   FtsJ homolog 3 
ADD2                  0.021   adducin 2 isoform c 
ADD2                  0.021   adducin 2 isoform a 
TERF2IP               0.018   telomeric repeat binding factor 2, interacting prote...
LOC649201             0.018   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC649201             0.018   PREDICTED: similar to paraneoplastic antigen MA1 [H...
LOC649201             0.018   PREDICTED: similar to paraneoplastic antigen MA1 [H...
GSTK1                 0.016   glutathione S-transferase kappa 1 isoform b 
BPTF                  0.016   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.016   bromodomain PHD finger transcription factor isoform ...
CNPY4                 0.016   canopy 4 homolog 
FAM9A                 0.016   family with sequence similarity 9, member A 
KTN1                  0.013   kinectin 1 isoform b 
KTN1                  0.013   kinectin 1 isoform a 
KTN1                  0.013   kinectin 1 isoform c 
KTN1                  0.013   kinectin 1 isoform a 
MUC12                 0.013   PREDICTED: mucin 12 
LOC100293596          0.013   PREDICTED: similar to mucin 
MUC12                 0.013   PREDICTED: mucin 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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