Search of human proteins with 239742758

Search of human proteins with 239742758

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742758 PREDICTED: hypothetical protein XP_002342618 [Homo
sapiens]
         (631 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239742758 PREDICTED: hypothetical protein XP_002342618 [Homo ...  1291   0.0  
gi|239754195 PREDICTED: hypothetical protein [Homo sapiens]          1288   0.0  
gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo ...   949   0.0  
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]         36   0.12 
gi|239756667 PREDICTED: hypothetical protein [Homo sapiens]            35   0.16 
gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo ...    35   0.16 
gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo ...    35   0.16 
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1...    35   0.16 
gi|56549696 E1A binding protein p400 [Homo sapiens]                    35   0.21 
gi|153792074 proline rich 12 [Homo sapiens]                            35   0.27 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    34   0.36 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    34   0.47 
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]          33   0.80 
gi|169210350 PREDICTED: hypothetical protein [Homo sapiens]            33   0.80 
gi|113426339 PREDICTED: hypothetical protein [Homo sapiens]            33   0.80 
gi|113426005 PREDICTED: hypothetical protein [Homo sapiens]            33   0.80 
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    33   0.80 
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho...    33   0.80 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    33   1.0  
gi|21450761 hypothetical protein LOC221908 [Homo sapiens]              33   1.0  
gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens]             32   1.4  
gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]          32   1.4  
gi|38327037 hyperpolarization activated cyclic nucleotide-gated ...    32   1.4  
gi|55741473 HECT, C2 and WW domain containing E3 ubiquitin prote...    32   1.4  
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    32   1.8  
gi|61835172 fragile X mental retardation-related protein 1 isofo...    32   1.8  
gi|61835164 fragile X mental retardation-related protein 1 isofo...    32   1.8  
gi|61835148 fragile X mental retardation-related protein 1 isofo...    32   1.8  
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom...    32   2.3  
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom...    32   2.3  

>gi|239742758 PREDICTED: hypothetical protein XP_002342618 [Homo
           sapiens]
          Length = 631

 Score = 1291 bits (3342), Expect = 0.0
 Identities = 631/631 (100%), Positives = 631/631 (100%)

Query: 1   MDSPYNPRNPTHDQQMTEKSQMQVTPHVKPTLDFRHIPSPVSHNPGGFDHNASPDQTRLD 60
           MDSPYNPRNPTHDQQMTEKSQMQVTPHVKPTLDFRHIPSPVSHNPGGFDHNASPDQTRLD
Sbjct: 1   MDSPYNPRNPTHDQQMTEKSQMQVTPHVKPTLDFRHIPSPVSHNPGGFDHNASPDQTRLD 60

Query: 61  IGQRSAVCGGSQCTSLRTRIDPITNVNGMVTSWLSERVKGEEHLKLFHILQHEVLEKELS 120
           IGQRSAVCGGSQCTSLRTRIDPITNVNGMVTSWLSERVKGEEHLKLFHILQHEVLEKELS
Sbjct: 61  IGQRSAVCGGSQCTSLRTRIDPITNVNGMVTSWLSERVKGEEHLKLFHILQHEVLEKELS 120

Query: 121 VEEALAGRTAGPESDTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQGPE 180
           VEEALAGRTAGPESDTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQGPE
Sbjct: 121 VEEALAGRTAGPESDTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQGPE 180

Query: 181 CGCEEDVWKDTPPTRKHTLRERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCF 240
           CGCEEDVWKDTPPTRKHTLRERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCF
Sbjct: 181 CGCEEDVWKDTPPTRKHTLRERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCF 240

Query: 241 RSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVI 300
           RSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVI
Sbjct: 241 RSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVI 300

Query: 301 HDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQV 360
           HDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQV
Sbjct: 301 HDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQV 360

Query: 361 QLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAGV 420
           QLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAGV
Sbjct: 361 QLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAGV 420

Query: 421 HHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRP 480
           HHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRP
Sbjct: 421 HHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRP 480

Query: 481 AVVARDLVVALELAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELSR 540
           AVVARDLVVALELAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELSR
Sbjct: 481 AVVARDLVVALELAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELSR 540

Query: 541 GPIMQQLVQAAPNSAAVTGDDQDGNHRRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQQ 600
           GPIMQQLVQAAPNSAAVTGDDQDGNHRRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQQ
Sbjct: 541 GPIMQQLVQAAPNSAAVTGDDQDGNHRRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQQ 600

Query: 601 PTLPLQLHLGVLGQANHFPGEAGGVAIESAD 631
           PTLPLQLHLGVLGQANHFPGEAGGVAIESAD
Sbjct: 601 PTLPLQLHLGVLGQANHFPGEAGGVAIESAD 631


>gi|239754195 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 631

 Score = 1288 bits (3333), Expect = 0.0
 Identities = 630/631 (99%), Positives = 630/631 (99%)

Query: 1   MDSPYNPRNPTHDQQMTEKSQMQVTPHVKPTLDFRHIPSPVSHNPGGFDHNASPDQTRLD 60
           MDSPYNPRNPTHDQQMTEKSQMQVTPHVKPTLDFRHIPSPVSHNPGGFDHNASP QTRLD
Sbjct: 1   MDSPYNPRNPTHDQQMTEKSQMQVTPHVKPTLDFRHIPSPVSHNPGGFDHNASPVQTRLD 60

Query: 61  IGQRSAVCGGSQCTSLRTRIDPITNVNGMVTSWLSERVKGEEHLKLFHILQHEVLEKELS 120
           IGQRSAVCGGSQCTSLRTRIDPITNVNGMVTSWLSERVKGEEHLKLFHILQHEVLEKELS
Sbjct: 61  IGQRSAVCGGSQCTSLRTRIDPITNVNGMVTSWLSERVKGEEHLKLFHILQHEVLEKELS 120

Query: 121 VEEALAGRTAGPESDTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQGPE 180
           VEEALAGRTAGPESDTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQGPE
Sbjct: 121 VEEALAGRTAGPESDTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQGPE 180

Query: 181 CGCEEDVWKDTPPTRKHTLRERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCF 240
           CGCEEDVWKDTPPTRKHTLRERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCF
Sbjct: 181 CGCEEDVWKDTPPTRKHTLRERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCF 240

Query: 241 RSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVI 300
           RSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVI
Sbjct: 241 RSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVI 300

Query: 301 HDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQV 360
           HDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQV
Sbjct: 301 HDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQV 360

Query: 361 QLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAGV 420
           QLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAGV
Sbjct: 361 QLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAGV 420

Query: 421 HHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRP 480
           HHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRP
Sbjct: 421 HHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRP 480

Query: 481 AVVARDLVVALELAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELSR 540
           AVVARDLVVALELAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELSR
Sbjct: 481 AVVARDLVVALELAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELSR 540

Query: 541 GPIMQQLVQAAPNSAAVTGDDQDGNHRRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQQ 600
           GPIMQQLVQAAPNSAAVTGDDQDGNHRRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQQ
Sbjct: 541 GPIMQQLVQAAPNSAAVTGDDQDGNHRRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQQ 600

Query: 601 PTLPLQLHLGVLGQANHFPGEAGGVAIESAD 631
           PTLPLQLHLGVLGQANHFPGEAGGVAIESAD
Sbjct: 601 PTLPLQLHLGVLGQANHFPGEAGGVAIESAD 631


>gi|239748723 PREDICTED: hypothetical protein XP_002346783 [Homo
           sapiens]
          Length = 541

 Score =  949 bits (2454), Expect = 0.0
 Identities = 478/512 (93%), Positives = 478/512 (93%), Gaps = 33/512 (6%)

Query: 120 SVEEALAGRTAGPESDTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQGP 179
           S EEALAGRTAGPESDTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLP      
Sbjct: 63  SQEEALAGRTAGPESDTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLP------ 116

Query: 180 ECGCEEDVWKDTPPTRKHTLRERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPC 239
                                      ALPGPGAAATHTRMPPEQALMGEYQETPEGAPC
Sbjct: 117 ---------------------------ALPGPGAAATHTRMPPEQALMGEYQETPEGAPC 149

Query: 240 FRSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKV 299
           FRSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKV
Sbjct: 150 FRSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKV 209

Query: 300 IHDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQ 359
           IHDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQ
Sbjct: 210 IHDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQ 269

Query: 360 VQLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAG 419
           VQLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAG
Sbjct: 270 VQLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAG 329

Query: 420 VHHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQR 479
           VHHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQR
Sbjct: 330 VHHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQR 389

Query: 480 PAVVARDLVVALELAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELS 539
           PAVVARDLVVALELAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELS
Sbjct: 390 PAVVARDLVVALELAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELS 449

Query: 540 RGPIMQQLVQAAPNSAAVTGDDQDGNHRRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQ 599
           RGPIMQQLVQAAPNSAAVTGDDQDGNHRRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQ
Sbjct: 450 RGPIMQQLVQAAPNSAAVTGDDQDGNHRRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQ 509

Query: 600 QPTLPLQLHLGVLGQANHFPGEAGGVAIESAD 631
           QPTLPLQLHLGVLGQANHFPGEAGGVAIESAD
Sbjct: 510 QPTLPLQLHLGVLGQANHFPGEAGGVAIESAD 541


>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
          Length = 1303

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 370 PPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVE-QLRPAGVHHLLLAVV 428
           PP P   PP P  P+   P+   LSP+  QQQ    ++     E  +RP G     L V 
Sbjct: 542 PPPPPPPPPPPGPPQMPMPVHEPLSPQQLQQQDMYNKKIPSLFEIVVRPTGQLAEKLGVR 601

Query: 429 IPGRDAPQGGVGLQQRIGGP 448
            PG   P G +G    +G P
Sbjct: 602 FPGPGGPPGPMGPGPNMGPP 621


>gi|239756667 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 484

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)

Query: 436 QGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRPAVVARDLVVALELAV 495
           Q GVG + R+G  K       HL V L   G     L E  AQ   +  ++++  + L V
Sbjct: 119 QCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVV 178

Query: 496 VRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEE--LSRGPIMQQLVQAAPN 553
           + +     ++  P  RD    GG      L P       G+E  L    ++ QL+Q    
Sbjct: 179 LHKMLPILELPSPSSRDALHRGGP-----LPPPTHGRCSGDEVRLHEQDVLAQLLQTRRE 233

Query: 554 SAAVTGDD 561
            A +   D
Sbjct: 234 QAGLLSQD 241


>gi|239751165 PREDICTED: hypothetical protein XP_002347739 [Homo
           sapiens]
          Length = 484

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)

Query: 436 QGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRPAVVARDLVVALELAV 495
           Q GVG + R+G  K       HL V L   G     L E  AQ   +  ++++  + L V
Sbjct: 119 QCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVV 178

Query: 496 VRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEE--LSRGPIMQQLVQAAPN 553
           + +     ++  P  RD    GG      L P       G+E  L    ++ QL+Q    
Sbjct: 179 LHKMLPILELPSPSSRDALHRGGP-----LPPPTHGRCSGDEVRLHEQDVLAQLLQTRRE 233

Query: 554 SAAVTGDD 561
            A +   D
Sbjct: 234 QAGLLSQD 241


>gi|239745650 PREDICTED: hypothetical protein XP_002344167 [Homo
           sapiens]
          Length = 484

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)

Query: 436 QGGVGLQQRIGGPKVLEEVRGHLQVILHHHGRGEAKLPEDLAQRPAVVARDLVVALELAV 495
           Q GVG + R+G  K       HL V L   G     L E  AQ   +  ++++  + L V
Sbjct: 119 QCGVGARARLGLEKSGPRAEAHLAVQLDVLGEERVDLGERAAQAAGMHVQEVLDRVHLVV 178

Query: 496 VRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEE--LSRGPIMQQLVQAAPN 553
           + +     ++  P  RD    GG      L P       G+E  L    ++ QL+Q    
Sbjct: 179 LHKMLPILELPSPSSRDALHRGGP-----LPPPTHGRCSGDEVRLHEQDVLAQLLQTRRE 233

Query: 554 SAAVTGDD 561
            A +   D
Sbjct: 234 QAGLLSQD 241


>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
           [Homo sapiens]
          Length = 812

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 59/263 (22%), Positives = 97/263 (36%), Gaps = 27/263 (10%)

Query: 205 YVALPGPGAAATHTRMPPEQALM----GEYQETPEGAPCFRSLRTQSFVLRPPVPGLRIQ 260
           Y+ LP   A    T +PP   L+    G+    P+G P   +  T    LR  + G   Q
Sbjct: 464 YILLPLEAA----TGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQ 519

Query: 261 VQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRL----KVIHDTQSLGESLEAVPAR 316
                       +QV    P++ G   P+ + R+       ++    QS GE+ E  P+ 
Sbjct: 520 QPPQQQPSPQPQQQVQPPQPQMAG---PLVTQRDDVATQFGQMTLSRQSSGETPEP-PSG 575

Query: 317 ILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLDLRAYAGPPLP--- 373
            ++P      P   P ++    G  +  G   S  G P+  + +Q        PP P   
Sbjct: 576 PVYPSSLMPQPAQQPSYVIASTGQQLPTGG-FSGSGPPISQQVLQ-------PPPSPQGF 627

Query: 374 LLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAGVHHLLLAVVIPGRD 433
           + +PP   +P   +P G   +    Q +P    +      Q  P          V+ G+ 
Sbjct: 628 VQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQ 687

Query: 434 APQGGVGLQQRIGGPKVLEEVRG 456
             QG +G+QQ      V+   +G
Sbjct: 688 GFQGLIGVQQPPQSQNVINNQQG 710


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 49/173 (28%), Positives = 66/173 (38%), Gaps = 29/173 (16%)

Query: 290  ASSRNPRLKVIHDTQSLGESLEAVPARILHPHLPQLLPVIGPHFL--HLQLGSTVDAGEE 347
            A +R P  +V+   Q    S+    +R+  P  P  L   G  F   H QL   + AG+ 
Sbjct: 1557 AQARLPSGEVVKIAQLA--SITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQ-LTAGQP 1613

Query: 348  ISVIGLPLQVRQVQLDLRAYAGPPLPLLRPPHPVVPEGLWPLG-----LQLSPELGQQQP 402
            + + G  LQ+          + P  P LR P PVV + +   G     L   P  G   P
Sbjct: 1614 LQLQGSVLQI---------VSAPGQPYLRAPGPVVMQTVSQAGAVHGALGSKPPAGGPSP 1664

Query: 403  AQAREKVGAVEQLRPAGVHHLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVR 455
            A    +VG      P  V    LAV  PG  +          IGGP   E+ R
Sbjct: 1665 APLTPQVGV-----PGRVAVNALAVGEPGTASKPA-----SPIGGPTQEEKTR 1707


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 36/122 (29%), Positives = 45/122 (36%), Gaps = 10/122 (8%)

Query: 320 PHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLDLRAYAGPPLPLLRPPH 379
           P LP +LP   P  L   L          S +G+ L      L+     G P P   PP 
Sbjct: 788 PDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHL------LEPATRDGAPQP---PPP 838

Query: 380 PVVPEGLWPLGLQLSPELGQQQPAQAREKVGAVEQLRPAGVHHLLLAVVIPGRDAP-QGG 438
           P  P    PL L+        +PA    ++   E L P G    LL  + P   AP   G
Sbjct: 839 PPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTG 898

Query: 439 VG 440
           VG
Sbjct: 899 VG 900


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 38/159 (23%), Positives = 55/159 (34%), Gaps = 7/159 (4%)

Query: 253 PVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVIHDTQSLGESLEA 312
           P P  R +   G GL+    R + ++A  L        S+R       H +Q   + L+A
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 279

Query: 313 VPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLDLRAYAGPPL 372
           +    + P      P +GP      L +   +    S     L        L      PL
Sbjct: 280 LRPPQVTPPRKDAAPALGP-LSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPL 338

Query: 373 PLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGA 411
           P L PP P  P       LQ  P      P+QA   +G+
Sbjct: 339 P-LAPPSPSAPP-----SLQTLPSPPATPPSQATTSLGS 371



 Score = 32.7 bits (73), Expect = 1.0
 Identities = 72/306 (23%), Positives = 102/306 (33%), Gaps = 41/306 (13%)

Query: 129 TAGPESDTQVTGPE-QGRPRPTALYDIGHQAGLQEIGPWCLLP-------------KLPV 174
           +A P S    +GP  +G PR  A        GLQ + P  + P               P+
Sbjct: 245 SATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL 304

Query: 175 NCQGPECGCEEDVWKDTPPTRKHTLRERVQY-----VALPGPGAAATHTRMPPEQALMGE 229
               P    +      T P   H+     Q      +A P P A  +   +P   A    
Sbjct: 305 ATPSPSAALQSQA-PPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPS 363

Query: 230 YQETPEGAPCFRSLRTQSFVLRPPVPGLRI---QVQLGNGLEEAWGRQVDTAAPELEGDN 286
              T  G+P  ++  T SF+  PP+  L     Q      L          A+P L    
Sbjct: 364 QATTSLGSPTLQA--THSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLA 421

Query: 287 TPVASSRNPRLKVIHDTQSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGE 346
           TP  S + P    +H  Q+      + P +   P  P   P + P        +T  +  
Sbjct: 422 TP--SPQAPNALAVHLLQAPFSPPPSPPVQA--PFSPPASPPVSP-------SATPPSQA 470

Query: 347 EISVIGLPLQVRQVQLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAR 406
             S+   PLQV          A PP+     P P  P  L    LQL+    Q  PA A 
Sbjct: 471 PPSLAAPPLQVPP-----SPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 525

Query: 407 EKVGAV 412
             + A+
Sbjct: 526 PPLQAL 531


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 46/195 (23%), Positives = 70/195 (35%), Gaps = 11/195 (5%)

Query: 253 PVPGLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVIHDTQSLGESLEA 312
           P P  R +   G GL+    R + ++A  L        S+R       H +Q   + L+A
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 279

Query: 313 VPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLDLRAYAGPPL 372
           +    + P      P +GP      L +   +G +   +  P       L       PPL
Sbjct: 280 LRPPQVTPPRKDAAPALGP-LSSSPLATPSPSGTKARPVP-PPDNAATPLPATLPPSPPL 337

Query: 373 --PL-LRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGA---VEQLRPAGVHHLLLA 426
             PL L PP P  P  L  L    +    Q  P+     + A   ++ + P  V H L +
Sbjct: 338 ATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTS 397

Query: 427 VVIPGRDAPQGGVGL 441
              P   AP   + L
Sbjct: 398 ---PSLQAPPSPLAL 409


>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
          Length = 1133

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 16/115 (13%)

Query: 146 PRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQG-----PECGCEEDVWKDTPPTRKHTLR 200
           P PT  + I   +   +  P CLL  LP +        PEC     V    PP+    L+
Sbjct: 248 PPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNLKTPPEC-----VLTPLPPSADDNLK 302

Query: 201 ERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCFRSLRTQSFVLRPPVP 255
              + V  P P +A  + + PPE  L      TP       +L+T    L  P+P
Sbjct: 303 TPPECVLTPLPPSADDNLKTPPECLL------TPLPPSADDNLKTPPECLLTPLP 351



 Score = 30.0 bits (66), Expect = 6.7
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 165 PWCLLPKLPVNCQG-----PEC---GCEEDVWKDTPPTRKHTLRERVQYVALPGPGAAAT 216
           P CLL  LP +        PEC             PP+    L+ R + +  P P +A  
Sbjct: 324 PECLLTPLPPSADDNLKTPPECLLTPLPPSALPSAPPSADDNLKTRAECLLHPLPPSADD 383

Query: 217 HTRMPPEQALMGEYQETPEGAPCFRSLRTQSFVLRPPVP 255
           + + P E+ L       P  A    +++T +  LR P+P
Sbjct: 384 NLKTPSERQLTPLPPSAPPSAD--DNIKTPAERLRGPLP 420


>gi|169210350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 493 LAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELSRGPIMQQLVQAAP 552
           L+  RR R   + G  +  +  A    G     V     ++D EE        Q V AAP
Sbjct: 41  LSPQRRTRRRERRGEREADEGEATSFPGPCAAHVAGAPEDEDDEE--------QAVAAAP 92

Query: 553 NSAAVTGDDQDGNHRRRGG-HRHTRLGGRGRGGHPPPLARQGIP 595
           ++   T     G+ RR     RH   G  GRG  PP L R+  P
Sbjct: 93  HAHTATASPPPGSARRAAAVARHA--GSEGRGWRPPGLGREAGP 134


>gi|113426339 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 493 LAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELSRGPIMQQLVQAAP 552
           L+  RR R   + G  +  +  A    G     V     ++D EE        Q V AAP
Sbjct: 41  LSPQRRTRRRERRGEREADEGEATSFPGPCAAHVAGAPEDEDDEE--------QAVAAAP 92

Query: 553 NSAAVTGDDQDGNHRRRGG-HRHTRLGGRGRGGHPPPLARQGIP 595
           ++   T     G+ RR     RH   G  GRG  PP L R+  P
Sbjct: 93  HAHTATASPPPGSARRAAAVARHA--GSEGRGWRPPGLGREAGP 134


>gi|113426005 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 165

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 493 LAVVRRHRNAAQVGLPDVRDRAAVGGDGLGRLLVPAVLANDDGEELSRGPIMQQLVQAAP 552
           L+  RR R   + G  +  +  A    G     V     ++D EE        Q V AAP
Sbjct: 41  LSPQRRTRRRERRGEREADEGEATSFPGPCAAHVAGAPEDEDDEE--------QAVAAAP 92

Query: 553 NSAAVTGDDQDGNHRRRGG-HRHTRLGGRGRGGHPPPLARQGIP 595
           ++   T     G+ RR     RH   G  GRG  PP L R+  P
Sbjct: 93  HAHTATASPPPGSARRAAAVARHA--GSEGRGWRPPGLGREAGP 134


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 42/161 (26%), Positives = 61/161 (37%), Gaps = 18/161 (11%)

Query: 245  TQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVDTAAPELE-GDNTPVASSRNPRLKVIHDT 303
            +Q+F  R P PG    + L    ++ W +Q  TAA  +    +    S+  P L      
Sbjct: 2795 SQAFYQRAPYPG---SLPLQQQQQQLWQQQQATAATSMRFAMSARFPSTPGPEL----GR 2847

Query: 304  QSLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLD 363
            Q+LG  L  +  R+  P  P   P     F+ L+       G      G P   +     
Sbjct: 2848 QALGSPLAGISTRLPGPGEPVPGPAGPAQFIELRHNVQKGLGPG----GTPFPGQGPPQR 2903

Query: 364  LRAYAGPPLPLLRPPHPVVPEGLWPLGLQ-LSPELGQQQPA 403
             R Y     P+   PH + PEGL  L +  L P+     PA
Sbjct: 2904 PRFY-----PVSEDPHRLAPEGLRGLAVSGLPPQKPSAPPA 2939


>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
           sapiens]
          Length = 678

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 16/115 (13%)

Query: 146 PRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQG-----PECGCEEDVWKDTPPTRKHTLR 200
           P PT  + I   +   +  P CLL  LP +        PEC     V    PP+    L+
Sbjct: 248 PPPTQQHSITDNSLSLKTPPECLLTPLPPSADDNLKTPPEC-----VLTPLPPSADDNLK 302

Query: 201 ERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCFRSLRTQSFVLRPPVP 255
              + V  P P +A  + + PPE  L      TP       +L+T    L  P+P
Sbjct: 303 TPPECVLTPLPPSADDNLKTPPECLL------TPLPPSADDNLKTPPECLLTPLP 351



 Score = 30.0 bits (66), Expect = 6.7
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 165 PWCLLPKLPVNCQG-----PEC---GCEEDVWKDTPPTRKHTLRERVQYVALPGPGAAAT 216
           P CLL  LP +        PEC             PP+    L+ R + +  P P +A  
Sbjct: 324 PECLLTPLPPSADDNLKTPPECLLTPLPPSALPSAPPSADDNLKTRAECLLHPLPPSADD 383

Query: 217 HTRMPPEQALMGEYQETPEGAPCFRSLRTQSFVLRPPVP 255
           + + P E+ L       P  A    +++T +  LR P+P
Sbjct: 384 NLKTPSERQLTPLPPSAPPSAD--DNIKTPAERLRGPLP 420


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 71/288 (24%), Positives = 97/288 (33%), Gaps = 35/288 (12%)

Query: 129 TAGPESDTQVTGPE-QGRPRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQGPECGCEEDV 187
           +A P S    +GP  +G PR  A        GLQ + P  + P  P     P  G     
Sbjct: 236 SATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTP--PRKDAAPALGPLSSS 293

Query: 188 WKDTPPTRKHTLRERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCFRSLRTQS 247
              TP              A P P A  +   +P   A       T  G+P  ++  T S
Sbjct: 294 PLATPSPS-----------APPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQA--THS 340

Query: 248 FVLRPPVPGLRI---QVQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVIHDTQ 304
           F+  PP+  L     Q      L          A+P L    TP  S + P    +H  Q
Sbjct: 341 FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATP--SPQAPNALAVHLLQ 398

Query: 305 SLGESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLDL 364
           +      + P +   P  P   P + P        +T  +    S+   PLQV       
Sbjct: 399 APFSPPPSPPVQA--PFSPPASPPVSP-------SATPPSQAPPSLAAPPLQVPP----- 444

Query: 365 RAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAV 412
              A PP+     P P  P  L    LQL+    Q  PA A   + A+
Sbjct: 445 SPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQAL 492


>gi|21450761 hypothetical protein LOC221908 [Homo sapiens]
          Length = 253

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 38/125 (30%), Positives = 47/125 (37%), Gaps = 19/125 (15%)

Query: 307 GESLEAVPARILHPHLPQLLPVIGPHFLHLQLGSTVDAGE-----------EISVIGLPL 355
           GE   AVP     P +PQL   +    L L L    D+ +                G   
Sbjct: 15  GEEAAAVPGPPPEPQVPQLRAPVPEPGLDLSLSPRPDSPQPRHGSPGRRKGRAERRGAAR 74

Query: 356 QVRQVQLDLRAYAGPPLPLLRPPHPVVPEGLWPLGLQLSPELGQQQPAQAREKVGAV--- 412
           Q RQV+  L     PP P+   P P VP+ L    L+ S  LG +  A A     A    
Sbjct: 75  QRRQVRFRLT----PPSPVRSEPQPAVPQELEMPVLKSSLALGLELRAAAGSHFDAAKAV 130

Query: 413 -EQLR 416
            EQLR
Sbjct: 131 EEQLR 135


>gi|239508712 PREDICTED: similar to rCG47812 [Homo sapiens]
          Length = 812

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 17/181 (9%)

Query: 142 EQGRPRPTALYDIGHQAGLQEIGP----WCLLPKLPVNCQGPECGCEEDVWKDTPPTRKH 197
           +QGR R    +D+    G+Q  GP    W        + + P        WK     R+ 
Sbjct: 591 QQGRLRVVPSHDVAPGLGIQVFGPEQDLW-----YRHSTREPAAPWVFQPWKLVSCPRRP 645

Query: 198 TLRERVQYVALPGPGAAATHTRMPPEQALMGEYQETPEGAPCFRSLRTQSFVLR--PPVP 255
            +  +     L GP +AA H   PP+ AL   +Q TP  A  F+    Q+ +++  PP  
Sbjct: 646 AVLTQTGSSGLLGP-SAAVHAGTPPQAAL---FQGTPPQAALFQGTPPQAALVQGIPPQA 701

Query: 256 GLRIQVQLGNGLEEAWGRQVDTAAPELEGDNTPVA--SSRNPRLKVIHDTQSLGESLEAV 313
            +   +  G   + A  +     A  L+G     A      P+  ++  T      L+  
Sbjct: 702 AVLCALLQGTPPQAALLQGTPPQAALLQGTPPQAALLQGTPPQAALLQGTPPQAALLQGT 761

Query: 314 P 314
           P
Sbjct: 762 P 762


>gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]
          Length = 770

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 14/156 (8%)

Query: 315 ARILHPHLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLDLRAYA---GPP 371
           A+ L+    Q++P +       Q+   V+  +++++  L   + Q QL  +  +   GPP
Sbjct: 82  AKRLNTICAQVIPFLSQEHQQ-QVAQAVERAKQVTMAELNAIIGQQQLQAQHLSHGHGPP 140

Query: 372 LPLLRPPHPVVPEGLWPLG-----LQLSPELGQQQPAQARE--KVGAVEQLR---PAGVH 421
           +PL   P  + P G+ PLG     L LS  L  Q     ++  K    E  R   P   +
Sbjct: 141 VPLTPHPSGLQPPGIPPLGGSAGLLALSSALSGQSHLAIKDDKKHHDAEHHRDREPGTSN 200

Query: 422 HLLLAVVIPGRDAPQGGVGLQQRIGGPKVLEEVRGH 457
            LL+   + G D  + G      I   KV ++   H
Sbjct: 201 SLLVPDSLRGTDKRRNGPEFSNDIKKRKVDDKDSSH 236


>gi|38327037 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 3 [Homo sapiens]
          Length = 774

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 34/112 (30%), Positives = 41/112 (36%), Gaps = 32/112 (28%)

Query: 310 LEAVPARILHPHLPQL----LPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLDLR 365
           L A PAR LH  L +     + ++GP             G  +   G PL   Q  L  R
Sbjct: 671 LPAPPARTLHASLSRAGRSQVSLLGP--------PPGGGGRRLGPRGRPLSASQPSLPQR 722

Query: 366 AYAG-------------PPLPLL-------RPPHPVVPEGLWPLGLQLSPEL 397
           A                PP  LL       +PP P VPE   P GLQLS  +
Sbjct: 723 ATGDGSPGRKGSGSERLPPSGLLAKPPRTAQPPRPPVPEPATPRGLQLSANM 774


>gi|55741473 HECT, C2 and WW domain containing E3 ubiquitin protein
            ligase 2 [Homo sapiens]
          Length = 1572

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 27/144 (18%)

Query: 135  DTQVTGPEQGRPRPTALYDIGHQAGLQEIGPWCLLPKLPVNCQGPECGCEEDVWKDTPP- 193
            D++  GP    PRP++ ++   +   Q++ P     K+    + P      ++ ++  P 
Sbjct: 1049 DSRHAGPPV-LPRPSSTFNTVSRPQYQDMVPVAYNDKIVAFLRQPNIF---EILQERQPD 1104

Query: 194  -TRKHTLRERVQYVALPG-PGAAATH-----------------TRMPPEQALMGEYQETP 234
             TR H+LRE++Q++   G PG                      + +PP   L   Y ++P
Sbjct: 1105 LTRNHSLREKIQFIRTEGTPGLVRLSSDADLVMLLSLFEEEIMSYVPPHALLHPSYCQSP 1164

Query: 235  EGAPCF---RSLRTQSFVLRPPVP 255
             G+P      S  TQ    R P P
Sbjct: 1165 RGSPVSSPQNSPGTQRANARAPAP 1188


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 2/109 (1%)

Query: 218  TRMPPEQALMGEYQETPEGA-PCFRSLRTQSFVLRPPVPGLRIQVQLGNGLEEAWGRQVD 276
            +RMP    L+G     P  + P    L T S + +   P  R +    N +         
Sbjct: 1557 SRMPLMNGLIGSSPHLPHNSLPPGSGLGTFSAIAQSSYPDARDKNSAFNPMASDPNNSWT 1616

Query: 277  TAAPELEGDNTPVASSRNPRLKVIHDTQSLGESLEAVPARILHPHLPQL 325
            ++AP +EG+N  +++++   LK     ++LGE     P    + + P L
Sbjct: 1617 SSAPTVEGENDTMSNAQRSTLK-WEKEEALGEMATVAPVLYTNINFPNL 1664


>gi|61835172 fragile X mental retardation-related protein 1 isoform
           c [Homo sapiens]
          Length = 536

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%)

Query: 560 DDQDGNH-----RRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQQP 601
           DD+D  H     RR GG   +  GGRGRGG  P   +  I  +L+ P
Sbjct: 343 DDRDSRHQRDSRRRPGGRGRSVSGGRGRGG--PRGGKSSISSVLKDP 387


>gi|61835164 fragile X mental retardation-related protein 1 isoform
           b [Homo sapiens]
          Length = 539

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%)

Query: 560 DDQDGNH-----RRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQQP 601
           DD+D  H     RR GG   +  GGRGRGG  P   +  I  +L+ P
Sbjct: 428 DDRDSRHQRDSRRRPGGRGRSVSGGRGRGG--PRGGKSSISSVLKDP 472


>gi|61835148 fragile X mental retardation-related protein 1 isoform
           a [Homo sapiens]
          Length = 621

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%)

Query: 560 DDQDGNH-----RRRGGHRHTRLGGRGRGGHPPPLARQGIPDLLQQP 601
           DD+D  H     RR GG   +  GGRGRGG  P   +  I  +L+ P
Sbjct: 428 DDRDSRHQRDSRRRPGGRGRSVSGGRGRGG--PRGGKSSISSVLKDP 472


>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 50/189 (26%), Positives = 63/189 (33%), Gaps = 45/189 (23%)

Query: 206 VALPGPGAAATHTRMP-----PEQALMGEYQETPEGAPCFRSLRTQSFVLRPPVPGLRIQ 260
           VAL G  A AT    P     P+ + +G   E     P       +SF + PP P     
Sbjct: 262 VALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFP-------RSFKVPPPTPVRTSS 314

Query: 261 VQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVIHDTQSLGESLEAVPARILHP 320
           + +    E          AP  E   T  A SR P     H    +  + +  P R   P
Sbjct: 315 IPVQEAQE----------APRKEEGATKKAPSRLPLPPSFH----IRPASQVYPDRAPEP 360

Query: 321 HLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLDLRAYAGPPLPLLRPPHP 380
             P  L    P     +LG +                 Q Q D RA   PP P L PP P
Sbjct: 361 DCPGELKATAP--ASPRLGQS-----------------QSQADERAGTPPPAPPLPPPAP 401

Query: 381 VVPEGLWPL 389
            +P    PL
Sbjct: 402 PLPPPAPPL 410


>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 50/189 (26%), Positives = 63/189 (33%), Gaps = 45/189 (23%)

Query: 206 VALPGPGAAATHTRMP-----PEQALMGEYQETPEGAPCFRSLRTQSFVLRPPVPGLRIQ 260
           VAL G  A AT    P     P+ + +G   E     P       +SF + PP P     
Sbjct: 262 VALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFP-------RSFKVPPPTPVRTSS 314

Query: 261 VQLGNGLEEAWGRQVDTAAPELEGDNTPVASSRNPRLKVIHDTQSLGESLEAVPARILHP 320
           + +    E          AP  E   T  A SR P     H    +  + +  P R   P
Sbjct: 315 IPVQEAQE----------APRKEEGATKKAPSRLPLPPSFH----IRPASQVYPDRAPEP 360

Query: 321 HLPQLLPVIGPHFLHLQLGSTVDAGEEISVIGLPLQVRQVQLDLRAYAGPPLPLLRPPHP 380
             P  L    P     +LG +                 Q Q D RA   PP P L PP P
Sbjct: 361 DCPGELKATAP--ASPRLGQS-----------------QSQADERAGTPPPAPPLPPPAP 401

Query: 381 VVPEGLWPL 389
            +P    PL
Sbjct: 402 PLPPPAPPL 410


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.137    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,256,733
Number of Sequences: 37866
Number of extensions: 1725872
Number of successful extensions: 5521
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 5436
Number of HSP's gapped (non-prelim): 136
length of query: 631
length of database: 18,247,518
effective HSP length: 108
effective length of query: 523
effective length of database: 14,157,990
effective search space: 7404628770
effective search space used: 7404628770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.